HEADER HYDROLASE 23-MAR-12 4AO6 TITLE NATIVE STRUCTURE OF A NOVEL COLD-ADAPTED ESTERASE FROM AN ARCTIC TITLE 2 INTERTIDAL METAGENOMIC LIBRARY COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: A HIS-TAGGED CONSTRUCT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 3 ORGANISM_TAXID: 32644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: M15 (PREP4); SOURCE 8 OTHER_DETAILS: FROM A METAGENOMIC LIBRARY FROM INTERTIDAL ZONE AT SOURCE 9 SVALBARD ARCHIPELAGO KEYWDS HYDROLASE, THERMO LABEL EXPDTA X-RAY DIFFRACTION AUTHOR J.FU,H.-K.S.LEIROS,D.D.PASCALE,K.A.JOHNSON,H.M.BLENCKE,B.LANDFALD REVDAT 3 08-MAY-24 4AO6 1 REMARK REVDAT 2 01-MAY-13 4AO6 1 JRNL REVDAT 1 08-AUG-12 4AO6 0 JRNL AUTH J.FU,H.-K.S.LEIROS,D.DE PASCALE,K.A.JOHNSON,H.M.BLENCKE, JRNL AUTH 2 B.LANDFALD JRNL TITL FUNCTIONAL AND STRUCTURAL STUDIES OF A NOVEL COLD-ADAPTED JRNL TITL 2 ESTERASE FROM AN ARCTIC INTERTIDAL METAGENOMIC LIBRARY. JRNL REF APPL.MICROBIOL.BIOTECHNOL. V. 97 3965 2013 JRNL REFN ISSN 0175-7598 JRNL PMID 22832985 JRNL DOI 10.1007/S00253-012-4276-9 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 26718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1420 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1869 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 104 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1697 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.25000 REMARK 3 B22 (A**2) : -0.59000 REMARK 3 B33 (A**2) : 0.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.094 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.094 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.172 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1764 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2396 ; 1.368 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 231 ; 5.178 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 68 ;36.453 ;23.676 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 294 ;12.921 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;10.113 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 263 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1329 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1121 ; 0.803 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1791 ; 1.415 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 643 ; 1.821 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 604 ; 2.872 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 247 REMARK 3 ORIGIN FOR THE GROUP (A): 35.5780 16.6247 14.9207 REMARK 3 T TENSOR REMARK 3 T11: 0.0461 T22: 0.0354 REMARK 3 T33: 0.0513 T12: 0.0002 REMARK 3 T13: 0.0050 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.2308 L22: 2.3145 REMARK 3 L33: 0.9728 L12: 0.7021 REMARK 3 L13: 0.3946 L23: 0.2543 REMARK 3 S TENSOR REMARK 3 S11: -0.0777 S12: -0.0252 S13: 0.1732 REMARK 3 S21: -0.2277 S22: -0.0031 S23: -0.0876 REMARK 3 S31: -0.1664 S32: 0.0281 S33: 0.0808 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4AO6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1290051838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28142 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.02000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 0.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26-30% POLYETHYLENE GLYCOL (PEG) 3350, REMARK 280 3% GLYCEROL 0.1 M SODIUM MALONATE PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 27.93000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.93500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.93000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.93500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 55.86000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 HIS A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 52 REMARK 465 GLY A 53 REMARK 465 THR A 54 REMARK 465 THR A 55 REMARK 465 HIS A 56 REMARK 465 LYS A 57 REMARK 465 LYS A 58 REMARK 465 VAL A 59 REMARK 465 HIS A 84 REMARK 465 GLY A 85 REMARK 465 GLU A 86 REMARK 465 ARG A 87 REMARK 465 ALA A 88 REMARK 465 SER A 89 REMARK 465 VAL A 90 REMARK 465 GLN A 91 REMARK 465 ALA A 92 REMARK 465 GLY A 93 REMARK 465 ARG A 94 REMARK 465 GLU A 95 REMARK 465 PRO A 96 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 5 CB CG SD CE REMARK 480 GLU A 12 CG CD OE1 OE2 REMARK 480 ASP A 27 CG OD1 OD2 REMARK 480 GLU A 40 CB CG CD OE1 OE2 REMARK 480 ASP A 44 OD2 REMARK 480 TYR A 61 CE2 REMARK 480 GLU A 63 OE1 REMARK 480 PRO A 82 O REMARK 480 GLU A 171 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 5 CA MET A 5 CB 0.153 REMARK 500 GLU A 12 CB GLU A 12 CG 0.204 REMARK 500 ASP A 27 CB ASP A 27 CG -0.238 REMARK 500 TYR A 61 CZ TYR A 61 CE2 0.147 REMARK 500 GLU A 63 CD GLU A 63 OE1 -0.087 REMARK 500 GLU A 171 CD GLU A 171 OE2 -0.287 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 5 N - CA - CB ANGL. DEV. = -19.6 DEGREES REMARK 500 GLU A 63 OE1 - CD - OE2 ANGL. DEV. = 11.4 DEGREES REMARK 500 GLU A 63 CG - CD - OE1 ANGL. DEV. = -12.7 DEGREES REMARK 500 GLU A 171 OE1 - CD - OE2 ANGL. DEV. = -47.5 DEGREES REMARK 500 GLU A 171 CG - CD - OE2 ANGL. DEV. = 37.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 8 111.09 72.22 REMARK 500 LYS A 10 128.53 83.24 REMARK 500 LEU A 15 -121.57 61.14 REMARK 500 ASP A 27 43.72 39.22 REMARK 500 GLU A 40 133.52 171.94 REMARK 500 SER A 144 -116.02 64.05 REMARK 500 LYS A 158 0.38 -68.98 REMARK 500 PHE A 235 -84.34 -100.08 REMARK 500 PHE A 235 -84.34 -102.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASP A 44 0.10 SIDE CHAIN REMARK 500 GLU A 171 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2002 DISTANCE = 6.02 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AO7 RELATED DB: PDB REMARK 900 ZINC BOUND STRUCTURE OF A NOVEL COLD-ADAPTED ESTERASE FROM AN REMARK 900 ARCTIC INTERTIDAL METAGENOMIC LIBRARY REMARK 900 RELATED ID: 4AO8 RELATED DB: PDB REMARK 900 PEG-BOUND COMPLEX OF A NOVEL COLD-ADAPTED ESTERASE FROM AN ARCTIC REMARK 900 INTERTIDAL METAGENOMIC LIBRARY REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES MRGSHHHHHHGS ARE THE N-TERMINAL HIS TAG DBREF 4AO6 A 1 247 PDB 4AO6 4AO6 1 247 SEQADV 4AO6 MET A -11 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 ARG A -10 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 GLY A -9 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 SER A -8 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 HIS A -7 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 HIS A -6 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 HIS A -5 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 HIS A -4 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 HIS A -3 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 HIS A -2 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 GLY A -1 PDB 4AO6 EXPRESSION TAG SEQADV 4AO6 SER A 0 PDB 4AO6 EXPRESSION TAG SEQRES 1 A 259 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 259 ARG HIS GLN MET SER TRP ASN GLY LYS ASP GLU ARG LYS SEQRES 3 A 259 LEU SER VAL GLN GLU ARG GLY PHE SER LEU GLU VAL ASP SEQRES 4 A 259 GLY ARG THR VAL PRO GLY VAL TYR TRP SER PRO ALA GLU SEQRES 5 A 259 GLY SER SER ASP ARG LEU VAL LEU LEU GLY HIS GLY GLY SEQRES 6 A 259 THR THR HIS LYS LYS VAL GLU TYR ILE GLU GLN VAL ALA SEQRES 7 A 259 LYS LEU LEU VAL GLY ARG GLY ILE SER ALA MET ALA ILE SEQRES 8 A 259 ASP GLY PRO GLY HIS GLY GLU ARG ALA SER VAL GLN ALA SEQRES 9 A 259 GLY ARG GLU PRO THR ASP VAL VAL GLY LEU ASP ALA PHE SEQRES 10 A 259 PRO ARG MET TRP HIS GLU GLY GLY GLY THR ALA ALA VAL SEQRES 11 A 259 ILE ALA ASP TRP ALA ALA ALA LEU ASP PHE ILE GLU ALA SEQRES 12 A 259 GLU GLU GLY PRO ARG PRO THR GLY TRP TRP GLY LEU SER SEQRES 13 A 259 MET GLY THR MET MET GLY LEU PRO VAL THR ALA SER ASP SEQRES 14 A 259 LYS ARG ILE LYS VAL ALA LEU LEU GLY LEU MET GLY VAL SEQRES 15 A 259 GLU GLY VAL ASN GLY GLU ASP LEU VAL ARG LEU ALA PRO SEQRES 16 A 259 GLN VAL THR CYS PRO VAL ARG TYR LEU LEU GLN TRP ASP SEQRES 17 A 259 ASP GLU LEU VAL SER LEU GLN SER GLY LEU GLU LEU PHE SEQRES 18 A 259 GLY LYS LEU GLY THR LYS GLN LYS THR LEU HIS VAL ASN SEQRES 19 A 259 PRO GLY LYS HIS SER ALA VAL PRO THR TRP GLU MET PHE SEQRES 20 A 259 ALA GLY THR VAL ASP TYR LEU ASP GLN ARG LEU LYS FORMUL 2 HOH *110(H2 O) HELIX 1 1 GLU A 60 ARG A 72 1 13 HELIX 2 2 ASP A 98 LEU A 102 5 5 HELIX 3 3 ALA A 104 GLY A 112 1 9 HELIX 4 4 GLY A 113 GLY A 134 1 22 HELIX 5 5 SER A 144 ASP A 157 1 14 HELIX 6 6 ASN A 174 ALA A 182 1 9 HELIX 7 7 PRO A 183 VAL A 185 5 3 HELIX 8 8 SER A 201 LEU A 212 1 12 HELIX 9 9 PRO A 230 PHE A 235 1 6 HELIX 10 10 PHE A 235 LEU A 246 1 12 SHEET 1 AA 2 SER A 6 TRP A 7 0 SHEET 2 AA 2 VAL A 17 VAL A 26 -1 O SER A 23 N SER A 6 SHEET 1 AB 2 GLU A 12 LYS A 14 0 SHEET 2 AB 2 VAL A 17 VAL A 26 -1 O VAL A 17 N LYS A 14 SHEET 1 AC 9 LYS A 217 ASN A 222 0 SHEET 2 AC 9 VAL A 189 GLN A 194 1 O VAL A 189 N THR A 218 SHEET 3 AC 9 ILE A 160 GLY A 166 1 O ALA A 163 N ARG A 190 SHEET 4 AC 9 THR A 138 GLY A 142 1 O THR A 138 N LYS A 161 SHEET 5 AC 9 ARG A 45 GLY A 50 1 O LEU A 46 N GLY A 139 SHEET 6 AC 9 ILE A 74 ILE A 79 1 O SER A 75 N VAL A 47 SHEET 7 AC 9 ARG A 29 PRO A 38 -1 O VAL A 34 N ALA A 78 SHEET 8 AC 9 VAL A 17 VAL A 26 -1 O GLN A 18 N SER A 37 SHEET 9 AC 9 GLU A 12 LYS A 14 -1 O GLU A 12 N GLU A 19 SHEET 1 AD 9 LYS A 217 ASN A 222 0 SHEET 2 AD 9 VAL A 189 GLN A 194 1 O VAL A 189 N THR A 218 SHEET 3 AD 9 ILE A 160 GLY A 166 1 O ALA A 163 N ARG A 190 SHEET 4 AD 9 THR A 138 GLY A 142 1 O THR A 138 N LYS A 161 SHEET 5 AD 9 ARG A 45 GLY A 50 1 O LEU A 46 N GLY A 139 SHEET 6 AD 9 ILE A 74 ILE A 79 1 O SER A 75 N VAL A 47 SHEET 7 AD 9 ARG A 29 PRO A 38 -1 O VAL A 34 N ALA A 78 SHEET 8 AD 9 VAL A 17 VAL A 26 -1 O GLN A 18 N SER A 37 SHEET 9 AD 9 SER A 6 TRP A 7 -1 O SER A 6 N SER A 23 CISPEP 1 ASN A 8 GLY A 9 0 -5.68 CISPEP 2 GLU A 40 GLY A 41 0 -1.05 CRYST1 55.860 69.870 54.060 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017902 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014312 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018498 0.00000