HEADER HYDROLASE 23-MAR-12 4AO8 TITLE PEG-BOUND COMPLEX OF A NOVEL COLD-ADAPTED ESTERASE FROM AN TITLE 2 ARCTIC INTERTIDAL METAGENOMIC LIBRARY CAVEAT 4AO8 VAL A 99 C-ALPHA WRONG HAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: HIS-TAGGED CONSTRUCT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 3 ORGANISM_TAXID: 32644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: M15 (PREP4); SOURCE 8 OTHER_DETAILS: FROM A METAGENOMIC LIBRARY FROM INTERTIDAL ZONE AT SOURCE 9 SVALBARD ARCHIPELAGO KEYWDS HYDROLASE, THERMO LABEL EXPDTA X-RAY DIFFRACTION AUTHOR J.FU,H.-K.S.LEIROS,D.D.PASCALE,K.A.JOHNSON,H.M.BLENCKE,B.LANDFALD REVDAT 2 01-MAY-13 4AO8 1 JRNL REVDAT 1 08-AUG-12 4AO8 0 JRNL AUTH J.FU,H.-K.S.LEIROS,D.DE PASCALE,K.A.JOHNSON,H.M.BLENCKE, JRNL AUTH 2 B.LANDFALD JRNL TITL FUNCTIONAL AND STRUCTURAL STUDIES OF A NOVEL COLD-ADAPTED JRNL TITL 2 ESTERASE FROM AN ARCTIC INTERTIDAL METAGENOMIC LIBRARY. JRNL REF APPL.MICROBIOL.BIOTECHNOL. V. 97 3965 2013 JRNL REFN ISSN 0175-7598 JRNL PMID 22832985 JRNL DOI 10.1007/S00253-012-4276-9 REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 98.93 REMARK 3 NUMBER OF REFLECTIONS : 26359 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.17955 REMARK 3 R VALUE (WORKING SET) : 0.17788 REMARK 3 FREE R VALUE : 0.21164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 1398 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.610 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.652 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1920 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.332 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.366 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1862 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.049 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07 REMARK 3 B22 (A**2) : -0.50 REMARK 3 B33 (A**2) : 0.57 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.784 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1880 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1274 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2556 ; 1.560 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3094 ; 0.956 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 248 ; 6.271 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 72 ;35.544 ;23.472 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 302 ;13.738 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;10.270 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 274 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2154 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 381 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1198 ; 1.032 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 508 ; 0.273 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1910 ; 1.811 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 682 ; 2.243 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 646 ; 3.491 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 247 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5859 -16.8435 -14.9768 REMARK 3 T TENSOR REMARK 3 T11: 0.0364 T22: 0.0526 REMARK 3 T33: 0.0460 T12: 0.0039 REMARK 3 T13: 0.0059 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.5011 L22: 1.5340 REMARK 3 L33: 0.3885 L12: -0.5704 REMARK 3 L13: -0.3754 L23: 0.1931 REMARK 3 S TENSOR REMARK 3 S11: -0.1111 S12: 0.0650 S13: -0.0606 REMARK 3 S21: 0.1872 S22: 0.0284 S23: -0.0368 REMARK 3 S31: 0.0833 S32: -0.0385 S33: 0.0827 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 4AO8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAR-12. REMARK 100 THE PDBE ID CODE IS EBI-51840. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97239 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 315R) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27769 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.61 REMARK 200 RESOLUTION RANGE LOW (A) : 55.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.3 REMARK 200 R MERGE (I) : 0.05 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 0.00 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.3 REMARK 200 R MERGE FOR SHELL (I) : 0.38 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 27.98500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.85950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.98500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.85950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 HIS A 3 REMARK 465 GLN A 4 REMARK 465 ALA A 88 REMARK 465 SER A 89 REMARK 465 VAL A 90 REMARK 465 GLN A 91 REMARK 465 ALA A 92 REMARK 465 GLY A 93 REMARK 465 ARG A 94 REMARK 465 GLU A 95 REMARK 465 PRO A 96 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 ARG A 13 NE CZ NH1 NH2 REMARK 470 LYS A 14 CB CG CD CE NZ REMARK 470 ASP A 27 CG OD1 OD2 REMARK 470 GLU A 40 CB CG CD OE1 OE2 REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 ARG A 87 C O REMARK 470 VAL A 99 CB CG1 CG2 REMARK 470 GLU A 111 CG CD OE1 OE2 REMARK 470 LYS A 161 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB LYS A 14 O VAL A 17 1.87 REMARK 500 OD1 ASP A 44 O HOH A 2018 2.07 REMARK 500 OG1 THR A 54 CB VAL A 99 1.64 REMARK 500 CG1 VAL A 99 CG LEU A 102 2.09 REMARK 500 O LYS A 247 O HOH A 2120 1.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2082 O HOH A 2082 2555 1.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 13 CD ARG A 13 NE -0.249 REMARK 500 LYS A 14 CA LYS A 14 C 0.486 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 13 CD - NE - CZ ANGL. DEV. = 9.5 DEGREES REMARK 500 LYS A 14 CA - C - O ANGL. DEV. = -17.9 DEGREES REMARK 500 LYS A 14 CA - C - N ANGL. DEV. = -35.7 DEGREES REMARK 500 ASP A 27 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 27 CB - CG - OD2 ANGL. DEV. = -7.0 DEGREES REMARK 500 VAL A 99 CA - CB - CG1 ANGL. DEV. = 16.1 DEGREES REMARK 500 VAL A 99 N - CA - CB ANGL. DEV. = 26.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 15 -78.43 173.38 REMARK 500 THR A 54 20.72 40.58 REMARK 500 THR A 55 -144.31 -114.59 REMARK 500 SER A 144 -115.42 67.20 REMARK 500 GLN A 216 53.70 -95.41 REMARK 500 PHE A 235 -85.19 -99.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 13 LYS A 14 -130.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS A 14 -29.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LYS A 14 21.9 L L OUTSIDE RANGE REMARK 500 VAL A 99 -10.2 L D WRONG HAND REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AO6 RELATED DB: PDB REMARK 900 NATIVE STRUCTURE OF A NOVEL COLD-ADAPTED ESTERASE FROM REMARK 900 AN ARCTIC INTERTIDAL METAGENOMIC LIBRARY REMARK 900 RELATED ID: 4AO7 RELATED DB: PDB REMARK 900 ZINC BOUND STRUCTURE OF A NOVEL COLD-ADAPTED ESTERASE REMARK 900 FROM AN ARCTIC INTERTIDAL METAGENOMIC LIBRARY REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES MRGSHHHHHHGS ARE THE N-TERMINAL HIS TAG DBREF 4AO8 A 1 247 PDB 4AO8 4AO8 1 247 SEQADV 4AO8 MET A -11 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 ARG A -10 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 GLY A -9 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 SER A -8 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 HIS A -7 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 HIS A -6 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 HIS A -5 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 HIS A -4 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 HIS A -3 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 HIS A -2 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 GLY A -1 PDB 4AO8 EXPRESSION TAG SEQADV 4AO8 SER A 0 PDB 4AO8 EXPRESSION TAG SEQRES 1 A 259 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 259 ARG HIS GLN MET SER TRP ASN GLY LYS ASP GLU ARG LYS SEQRES 3 A 259 LEU SER VAL GLN GLU ARG GLY PHE SER LEU GLU VAL ASP SEQRES 4 A 259 GLY ARG THR VAL PRO GLY VAL TYR TRP SER PRO ALA GLU SEQRES 5 A 259 GLY SER SER ASP ARG LEU VAL LEU LEU GLY HIS GLY GLY SEQRES 6 A 259 THR THR HIS LYS LYS VAL GLU TYR ILE GLU GLN VAL ALA SEQRES 7 A 259 LYS LEU LEU VAL GLY ARG GLY ILE SER ALA MET ALA ILE SEQRES 8 A 259 ASP GLY PRO GLY HIS GLY GLU ARG ALA SER VAL GLN ALA SEQRES 9 A 259 GLY ARG GLU PRO THR ASP VAL VAL GLY LEU ASP ALA PHE SEQRES 10 A 259 PRO ARG MET TRP HIS GLU GLY GLY GLY THR ALA ALA VAL SEQRES 11 A 259 ILE ALA ASP TRP ALA ALA ALA LEU ASP PHE ILE GLU ALA SEQRES 12 A 259 GLU GLU GLY PRO ARG PRO THR GLY TRP TRP GLY LEU SER SEQRES 13 A 259 MET GLY THR MET MET GLY LEU PRO VAL THR ALA SER ASP SEQRES 14 A 259 LYS ARG ILE LYS VAL ALA LEU LEU GLY LEU MET GLY VAL SEQRES 15 A 259 GLU GLY VAL ASN GLY GLU ASP LEU VAL ARG LEU ALA PRO SEQRES 16 A 259 GLN VAL THR CYS PRO VAL ARG TYR LEU LEU GLN TRP ASP SEQRES 17 A 259 ASP GLU LEU VAL SER LEU GLN SER GLY LEU GLU LEU PHE SEQRES 18 A 259 GLY LYS LEU GLY THR LYS GLN LYS THR LEU HIS VAL ASN SEQRES 19 A 259 PRO GLY LYS HIS SER ALA VAL PRO THR TRP GLU MET PHE SEQRES 20 A 259 ALA GLY THR VAL ASP TYR LEU ASP GLN ARG LEU LYS HET PEG A 702 7 HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 PEG C4 H10 O3 FORMUL 3 HOH *122(H2 O) HELIX 1 1 VAL A 59 ARG A 72 1 14 HELIX 2 2 ASP A 98 LEU A 102 5 5 HELIX 3 3 ALA A 104 GLY A 112 1 9 HELIX 4 4 GLY A 113 GLY A 134 1 22 HELIX 5 5 SER A 144 ASP A 157 1 14 HELIX 6 6 ASN A 174 ALA A 182 1 9 HELIX 7 7 PRO A 183 VAL A 185 5 3 HELIX 8 8 SER A 201 LEU A 212 1 12 HELIX 9 9 PRO A 230 PHE A 235 1 6 HELIX 10 10 PHE A 235 LEU A 246 1 12 SHEET 1 AA 9 SER A 6 ARG A 13 0 SHEET 2 AA 9 VAL A 17 VAL A 26 -1 O GLU A 19 N GLU A 12 SHEET 3 AA 9 ARG A 29 PRO A 38 -1 O ARG A 29 N VAL A 26 SHEET 4 AA 9 ILE A 74 ILE A 79 -1 O ALA A 76 N TRP A 36 SHEET 5 AA 9 ARG A 45 GLY A 50 1 O ARG A 45 N SER A 75 SHEET 6 AA 9 THR A 138 GLY A 142 1 O GLY A 139 N LEU A 48 SHEET 7 AA 9 ILE A 160 GLY A 166 1 N LYS A 161 O THR A 138 SHEET 8 AA 9 VAL A 189 GLN A 194 1 O ARG A 190 N LEU A 165 SHEET 9 AA 9 LYS A 217 ASN A 222 1 O THR A 218 N TYR A 191 CISPEP 1 GLU A 40 GLY A 41 0 1.46 SITE 1 AC1 7 LEU A 167 HIS A 226 SER A 227 VAL A 229 SITE 2 AC1 7 MET A 234 PHE A 235 HOH A2122 CRYST1 55.970 69.719 53.982 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017867 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018525 0.00000