data_4AQJ # _entry.id 4AQJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4AQJ PDBE EBI-52097 WWPDB D_1290052097 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1PSR unspecified 'HUMAN PSORIASIN (S100A7)' PDB 2PSR unspecified 'HUMAN PSORIASIN (S100A7) CA2+ AND ZN2+ BOUND FORM ( CRYSTAL FORM II)' PDB 2WND unspecified 'STRUCTURE OF AN S100A7 TRIPLE MUTANT' PDB 2WOR unspecified 'CO-STRUCTURE OF S100A7 WITH 1,8 ANS' PDB 2WOS unspecified 'STRUCTURE OF HUMAN S100A7 IN COMPLEX WITH 2,6 ANS' PDB 3PSR unspecified 'HUMAN PSORIASIN (S100A7) CA2+ BOUND FORM (CRYSTAL FORM I)' PDB 4AQI unspecified 'STRUCTURE OF HUMAN S100A15 BOUND TO ZINC AND CALCIUM' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4AQJ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-04-17 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Murray, J.I.' 1 'Tonkin, M.L.' 2 'Whiting, A.L.' 3 'Peng, F.' 4 'Farnell, B.' 5 'Hof, F.' 6 'Boulanger, M.J.' 7 # _citation.id primary _citation.title ;Structural Characterization of S100A15 Reveals a Novel Zinc Coordination Site Among S100 Proteins and Altered Surface Chemistry with Functional Implications for Receptor Binding. ; _citation.journal_abbrev 'Bmc Struct.Biol.' _citation.journal_volume 12 _citation.page_first 16 _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1472-6807 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22747601 _citation.pdbx_database_id_DOI 10.1186/1472-6807-12-16 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Murray, J.I.' 1 primary 'Tonkin, M.L.' 2 primary 'Whiting, A.L.' 3 primary 'Peng, F.' 4 primary 'Farnell, B.' 5 primary 'Cullen, J.T.' 6 primary 'Hof, F.' 7 primary 'Boulanger, M.J.' 8 # _cell.entry_id 4AQJ _cell.length_a 51.480 _cell.length_b 51.480 _cell.length_c 117.230 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AQJ _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN S100-A7' 12033.632 1 ? YES 'RESIDUES 2-97' ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 water nat water 18.015 143 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PSORIASIN, S100 CALCIUM-BINDING PROTEIN A7' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSAMGMSNTQAERSIIGMIDMFHKYTRRDGKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEF LSLLGDIATDYHKQSHGAAPCSGGSQAAA ; _entity_poly.pdbx_seq_one_letter_code_can ;GSAMGMSNTQAERSIIGMIDMFHKYTRRDGKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEF LSLLGDIATDYHKQSHGAAPCSGGSQAAA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 MET n 1 5 GLY n 1 6 MET n 1 7 SER n 1 8 ASN n 1 9 THR n 1 10 GLN n 1 11 ALA n 1 12 GLU n 1 13 ARG n 1 14 SER n 1 15 ILE n 1 16 ILE n 1 17 GLY n 1 18 MET n 1 19 ILE n 1 20 ASP n 1 21 MET n 1 22 PHE n 1 23 HIS n 1 24 LYS n 1 25 TYR n 1 26 THR n 1 27 ARG n 1 28 ARG n 1 29 ASP n 1 30 GLY n 1 31 LYS n 1 32 ILE n 1 33 ASP n 1 34 LYS n 1 35 PRO n 1 36 SER n 1 37 LEU n 1 38 LEU n 1 39 THR n 1 40 MET n 1 41 MET n 1 42 LYS n 1 43 GLU n 1 44 ASN n 1 45 PHE n 1 46 PRO n 1 47 ASN n 1 48 PHE n 1 49 LEU n 1 50 SER n 1 51 ALA n 1 52 CYS n 1 53 ASP n 1 54 LYS n 1 55 LYS n 1 56 GLY n 1 57 THR n 1 58 ASN n 1 59 TYR n 1 60 LEU n 1 61 ALA n 1 62 ASP n 1 63 VAL n 1 64 PHE n 1 65 GLU n 1 66 LYS n 1 67 LYS n 1 68 ASP n 1 69 LYS n 1 70 ASN n 1 71 GLU n 1 72 ASP n 1 73 LYS n 1 74 LYS n 1 75 ILE n 1 76 ASP n 1 77 PHE n 1 78 SER n 1 79 GLU n 1 80 PHE n 1 81 LEU n 1 82 SER n 1 83 LEU n 1 84 LEU n 1 85 GLY n 1 86 ASP n 1 87 ILE n 1 88 ALA n 1 89 THR n 1 90 ASP n 1 91 TYR n 1 92 HIS n 1 93 LYS n 1 94 GLN n 1 95 SER n 1 96 HIS n 1 97 GLY n 1 98 ALA n 1 99 ALA n 1 100 PRO n 1 101 CYS n 1 102 SER n 1 103 GLY n 1 104 GLY n 1 105 SER n 1 106 GLN n 1 107 ALA n 1 108 ALA n 1 109 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 83333 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain K-12 _entity_src_gen.pdbx_host_org_variant 'ROSETTA-GAMMI B' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET32A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code S10A7_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P31151 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4AQJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P31151 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 101 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 100 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4AQJ GLY A 1 ? UNP P31151 ? ? 'expression tag' -5 1 1 4AQJ SER A 2 ? UNP P31151 ? ? 'expression tag' -4 2 1 4AQJ ALA A 3 ? UNP P31151 ? ? 'expression tag' -3 3 1 4AQJ MET A 4 ? UNP P31151 ? ? 'expression tag' -2 4 1 4AQJ GLY A 5 ? UNP P31151 ? ? 'expression tag' -1 5 1 4AQJ GLY A 30 ? UNP P31151 ASP 25 'engineered mutation' 24 6 1 4AQJ ASP A 33 ? UNP P31151 GLU 28 variant 27 7 1 4AQJ ALA A 107 ? UNP P31151 ? ? 'expression tag' 101 8 1 4AQJ ALA A 108 ? UNP P31151 ? ? 'expression tag' 102 9 1 4AQJ ALA A 109 ? UNP P31151 ? ? 'expression tag' 103 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4AQJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.36 _exptl_crystal.density_percent_sol 63.43 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2M AMMONIUM SULFATE, 0.1M BISTRIS PH 5.5, 20-25% PEG 3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength 0.9794 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4AQJ _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.68 _reflns.d_resolution_high 1.60 _reflns.number_obs 21100 _reflns.number_all ? _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.30 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.69 _reflns_shell.percent_possible_all 98.4 _reflns_shell.Rmerge_I_obs 0.43 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.60 _reflns_shell.pdbx_redundancy 9.8 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4AQJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20020 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.76 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 97.35 _refine.ls_R_factor_obs 0.19081 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18901 _refine.ls_R_factor_R_free 0.22532 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1080 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 26.801 _refine.aniso_B[1][1] -0.01 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] 0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 4AQJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.074 _refine.pdbx_overall_ESU_R_Free 0.080 _refine.overall_SU_ML 0.047 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.282 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 765 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 143 _refine_hist.number_atoms_total 911 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 34.76 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 790 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.533 1.965 ? 1059 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.034 5.000 ? 99 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.960 25.135 ? 37 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.066 15.000 ? 156 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7.745 15.000 ? 3 'X-RAY DIFFRACTION' ? r_chiral_restr 0.113 0.200 ? 112 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.016 0.021 ? 587 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.743 1.500 ? 483 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.889 2.000 ? 777 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.986 3.000 ? 307 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 6.469 4.500 ? 280 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.642 _refine_ls_shell.number_reflns_R_work 1415 _refine_ls_shell.R_factor_R_work 0.250 _refine_ls_shell.percent_reflns_obs 96.28 _refine_ls_shell.R_factor_R_free 0.274 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 86 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4AQJ _struct.title 'Structure of human S100A7 D24G bound to zinc and calcium' _struct.pdbx_descriptor 'PROTEIN S100-A7' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4AQJ _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'METAL BINDING PROTEIN, CANCER, INFLAMMATION, EF-HAND' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 9 ? THR A 26 ? THR A 3 THR A 20 1 ? 18 HELX_P HELX_P2 2 ASP A 33 ? PHE A 45 ? ASP A 27 PHE A 39 1 ? 13 HELX_P HELX_P3 3 PHE A 45 ? LYS A 55 ? PHE A 39 LYS A 49 1 ? 11 HELX_P HELX_P4 4 ASP A 62 ? ASP A 68 ? ASP A 56 ASP A 62 1 ? 7 HELX_P HELX_P5 5 ASP A 76 ? HIS A 96 ? ASP A 70 HIS A 90 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 52 SG ? ? ? 1_555 A CYS 101 SG ? ? A CYS 46 A CYS 95 1_555 ? ? ? ? ? ? ? 2.050 ? metalc1 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 68 OD1 ? ? A CA 1097 A ASP 62 1_555 ? ? ? ? ? ? ? 2.352 ? metalc2 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 72 OD1 ? ? A CA 1097 A ASP 66 1_555 ? ? ? ? ? ? ? 2.429 ? metalc3 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 1097 A HOH 2113 1_555 ? ? ? ? ? ? ? 2.378 ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 A GLU 79 OE2 ? ? A CA 1097 A GLU 73 1_555 ? ? ? ? ? ? ? 2.548 ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 A GLU 79 OE1 ? ? A CA 1097 A GLU 73 1_555 ? ? ? ? ? ? ? 2.393 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 A ASN 70 OD1 ? ? A CA 1097 A ASN 64 1_555 ? ? ? ? ? ? ? 2.398 ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 A LYS 74 O ? ? A CA 1097 A LYS 68 1_555 ? ? ? ? ? ? ? 2.339 ? metalc8 metalc ? ? D ZN . ZN ? ? ? 1_555 A HIS 92 NE2 ? ? A ZN 1099 A HIS 86 1_555 ? ? ? ? ? ? ? 2.061 ? metalc9 metalc ? ? D ZN . ZN ? ? ? 1_555 C CL . CL ? ? A ZN 1099 A CL 1098 1_555 ? ? ? ? ? ? ? 2.155 ? metalc10 metalc ? ? D ZN . ZN ? ? ? 1_555 A HIS 23 NE2 ? ? A ZN 1099 A HIS 17 7_555 ? ? ? ? ? ? ? 2.090 ? metalc11 metalc ? ? D ZN . ZN ? ? ? 1_555 A HIS 96 NE2 ? ? A ZN 1099 A HIS 90 1_555 ? ? ? ? ? ? ? 1.982 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 1097' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CL A 1098' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 1099' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 68 ? ASP A 62 . ? 1_555 ? 2 AC1 6 ASN A 70 ? ASN A 64 . ? 1_555 ? 3 AC1 6 ASP A 72 ? ASP A 66 . ? 1_555 ? 4 AC1 6 LYS A 74 ? LYS A 68 . ? 1_555 ? 5 AC1 6 GLU A 79 ? GLU A 73 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH A 2113 . ? 1_555 ? 7 AC2 5 HIS A 23 ? HIS A 17 . ? 7_555 ? 8 AC2 5 GLY A 30 ? GLY A 24 . ? 7_555 ? 9 AC2 5 HIS A 92 ? HIS A 86 . ? 1_555 ? 10 AC2 5 HIS A 96 ? HIS A 90 . ? 1_555 ? 11 AC2 5 ZN D . ? ZN A 1099 . ? 1_555 ? 12 AC3 4 HIS A 23 ? HIS A 17 . ? 7_555 ? 13 AC3 4 HIS A 92 ? HIS A 86 . ? 1_555 ? 14 AC3 4 HIS A 96 ? HIS A 90 . ? 1_555 ? 15 AC3 4 CL C . ? CL A 1098 . ? 1_555 ? # _database_PDB_matrix.entry_id 4AQJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4AQJ _atom_sites.fract_transf_matrix[1][1] 0.019425 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019425 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008530 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -5 ? ? ? A . n A 1 2 SER 2 -4 ? ? ? A . n A 1 3 ALA 3 -3 ? ? ? A . n A 1 4 MET 4 -2 ? ? ? A . n A 1 5 GLY 5 -1 ? ? ? A . n A 1 6 MET 6 0 ? ? ? A . n A 1 7 SER 7 1 1 SER SER A . n A 1 8 ASN 8 2 2 ASN ASN A . n A 1 9 THR 9 3 3 THR THR A . n A 1 10 GLN 10 4 4 GLN GLN A . n A 1 11 ALA 11 5 5 ALA ALA A . n A 1 12 GLU 12 6 6 GLU GLU A . n A 1 13 ARG 13 7 7 ARG ARG A . n A 1 14 SER 14 8 8 SER SER A . n A 1 15 ILE 15 9 9 ILE ILE A . n A 1 16 ILE 16 10 10 ILE ILE A . n A 1 17 GLY 17 11 11 GLY GLY A . n A 1 18 MET 18 12 12 MET MET A . n A 1 19 ILE 19 13 13 ILE ILE A . n A 1 20 ASP 20 14 14 ASP ASP A . n A 1 21 MET 21 15 15 MET MET A . n A 1 22 PHE 22 16 16 PHE PHE A . n A 1 23 HIS 23 17 17 HIS HIS A . n A 1 24 LYS 24 18 18 LYS LYS A . n A 1 25 TYR 25 19 19 TYR TYR A . n A 1 26 THR 26 20 20 THR THR A . n A 1 27 ARG 27 21 21 ARG ARG A . n A 1 28 ARG 28 22 22 ARG ARG A . n A 1 29 ASP 29 23 23 ASP ASP A . n A 1 30 GLY 30 24 24 GLY GLY A . n A 1 31 LYS 31 25 25 LYS LYS A . n A 1 32 ILE 32 26 26 ILE ILE A . n A 1 33 ASP 33 27 27 ASP ASP A . n A 1 34 LYS 34 28 28 LYS LYS A . n A 1 35 PRO 35 29 29 PRO PRO A . n A 1 36 SER 36 30 30 SER SER A . n A 1 37 LEU 37 31 31 LEU LEU A . n A 1 38 LEU 38 32 32 LEU LEU A . n A 1 39 THR 39 33 33 THR THR A . n A 1 40 MET 40 34 34 MET MET A . n A 1 41 MET 41 35 35 MET MET A . n A 1 42 LYS 42 36 36 LYS LYS A . n A 1 43 GLU 43 37 37 GLU GLU A . n A 1 44 ASN 44 38 38 ASN ASN A . n A 1 45 PHE 45 39 39 PHE PHE A . n A 1 46 PRO 46 40 40 PRO PRO A . n A 1 47 ASN 47 41 41 ASN ASN A . n A 1 48 PHE 48 42 42 PHE PHE A . n A 1 49 LEU 49 43 43 LEU LEU A . n A 1 50 SER 50 44 44 SER SER A . n A 1 51 ALA 51 45 45 ALA ALA A . n A 1 52 CYS 52 46 46 CYS CYS A . n A 1 53 ASP 53 47 47 ASP ASP A . n A 1 54 LYS 54 48 48 LYS LYS A . n A 1 55 LYS 55 49 49 LYS LYS A . n A 1 56 GLY 56 50 50 GLY GLY A . n A 1 57 THR 57 51 51 THR THR A . n A 1 58 ASN 58 52 52 ASN ASN A . n A 1 59 TYR 59 53 53 TYR TYR A . n A 1 60 LEU 60 54 54 LEU LEU A . n A 1 61 ALA 61 55 55 ALA ALA A . n A 1 62 ASP 62 56 56 ASP ASP A . n A 1 63 VAL 63 57 57 VAL VAL A . n A 1 64 PHE 64 58 58 PHE PHE A . n A 1 65 GLU 65 59 59 GLU GLU A . n A 1 66 LYS 66 60 60 LYS LYS A . n A 1 67 LYS 67 61 61 LYS LYS A . n A 1 68 ASP 68 62 62 ASP ASP A . n A 1 69 LYS 69 63 63 LYS LYS A . n A 1 70 ASN 70 64 64 ASN ASN A . n A 1 71 GLU 71 65 65 GLU GLU A . n A 1 72 ASP 72 66 66 ASP ASP A . n A 1 73 LYS 73 67 67 LYS LYS A . n A 1 74 LYS 74 68 68 LYS LYS A . n A 1 75 ILE 75 69 69 ILE ILE A . n A 1 76 ASP 76 70 70 ASP ASP A . n A 1 77 PHE 77 71 71 PHE PHE A . n A 1 78 SER 78 72 72 SER SER A . n A 1 79 GLU 79 73 73 GLU GLU A . n A 1 80 PHE 80 74 74 PHE PHE A . n A 1 81 LEU 81 75 75 LEU LEU A . n A 1 82 SER 82 76 76 SER SER A . n A 1 83 LEU 83 77 77 LEU LEU A . n A 1 84 LEU 84 78 78 LEU LEU A . n A 1 85 GLY 85 79 79 GLY GLY A . n A 1 86 ASP 86 80 80 ASP ASP A . n A 1 87 ILE 87 81 81 ILE ILE A . n A 1 88 ALA 88 82 82 ALA ALA A . n A 1 89 THR 89 83 83 THR THR A . n A 1 90 ASP 90 84 84 ASP ASP A . n A 1 91 TYR 91 85 85 TYR TYR A . n A 1 92 HIS 92 86 86 HIS HIS A . n A 1 93 LYS 93 87 87 LYS LYS A . n A 1 94 GLN 94 88 88 GLN GLN A . n A 1 95 SER 95 89 89 SER SER A . n A 1 96 HIS 96 90 90 HIS HIS A . n A 1 97 GLY 97 91 91 GLY GLY A . n A 1 98 ALA 98 92 92 ALA ALA A . n A 1 99 ALA 99 93 93 ALA ALA A . n A 1 100 PRO 100 94 94 PRO PRO A . n A 1 101 CYS 101 95 95 CYS CYS A . n A 1 102 SER 102 96 96 SER SER A . n A 1 103 GLY 103 97 ? ? ? A . n A 1 104 GLY 104 98 ? ? ? A . n A 1 105 SER 105 99 ? ? ? A . n A 1 106 GLN 106 100 ? ? ? A . n A 1 107 ALA 107 101 ? ? ? A . n A 1 108 ALA 108 102 ? ? ? A . n A 1 109 ALA 109 103 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 1097 1097 CA CA A . C 3 CL 1 1098 1098 CL CL A . D 4 ZN 1 1099 1099 ZN ZN A . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . E 5 HOH 27 2027 2027 HOH HOH A . E 5 HOH 28 2028 2028 HOH HOH A . E 5 HOH 29 2029 2029 HOH HOH A . E 5 HOH 30 2030 2030 HOH HOH A . E 5 HOH 31 2031 2031 HOH HOH A . E 5 HOH 32 2032 2032 HOH HOH A . E 5 HOH 33 2033 2033 HOH HOH A . E 5 HOH 34 2034 2034 HOH HOH A . E 5 HOH 35 2035 2035 HOH HOH A . E 5 HOH 36 2036 2036 HOH HOH A . E 5 HOH 37 2037 2037 HOH HOH A . E 5 HOH 38 2038 2038 HOH HOH A . E 5 HOH 39 2039 2039 HOH HOH A . E 5 HOH 40 2040 2040 HOH HOH A . E 5 HOH 41 2041 2041 HOH HOH A . E 5 HOH 42 2042 2042 HOH HOH A . E 5 HOH 43 2043 2043 HOH HOH A . E 5 HOH 44 2044 2044 HOH HOH A . E 5 HOH 45 2045 2045 HOH HOH A . E 5 HOH 46 2046 2046 HOH HOH A . E 5 HOH 47 2047 2047 HOH HOH A . E 5 HOH 48 2048 2048 HOH HOH A . E 5 HOH 49 2049 2049 HOH HOH A . E 5 HOH 50 2050 2050 HOH HOH A . E 5 HOH 51 2051 2051 HOH HOH A . E 5 HOH 52 2052 2052 HOH HOH A . E 5 HOH 53 2053 2053 HOH HOH A . E 5 HOH 54 2054 2054 HOH HOH A . E 5 HOH 55 2055 2055 HOH HOH A . E 5 HOH 56 2056 2056 HOH HOH A . E 5 HOH 57 2057 2057 HOH HOH A . E 5 HOH 58 2058 2058 HOH HOH A . E 5 HOH 59 2059 2059 HOH HOH A . E 5 HOH 60 2060 2060 HOH HOH A . E 5 HOH 61 2061 2061 HOH HOH A . E 5 HOH 62 2062 2062 HOH HOH A . E 5 HOH 63 2063 2063 HOH HOH A . E 5 HOH 64 2064 2064 HOH HOH A . E 5 HOH 65 2065 2065 HOH HOH A . E 5 HOH 66 2066 2066 HOH HOH A . E 5 HOH 67 2067 2067 HOH HOH A . E 5 HOH 68 2068 2068 HOH HOH A . E 5 HOH 69 2069 2069 HOH HOH A . E 5 HOH 70 2070 2070 HOH HOH A . E 5 HOH 71 2071 2071 HOH HOH A . E 5 HOH 72 2072 2072 HOH HOH A . E 5 HOH 73 2073 2073 HOH HOH A . E 5 HOH 74 2074 2074 HOH HOH A . E 5 HOH 75 2075 2075 HOH HOH A . E 5 HOH 76 2076 2076 HOH HOH A . E 5 HOH 77 2077 2077 HOH HOH A . E 5 HOH 78 2078 2078 HOH HOH A . E 5 HOH 79 2079 2079 HOH HOH A . E 5 HOH 80 2080 2080 HOH HOH A . E 5 HOH 81 2081 2081 HOH HOH A . E 5 HOH 82 2082 2082 HOH HOH A . E 5 HOH 83 2083 2083 HOH HOH A . E 5 HOH 84 2084 2084 HOH HOH A . E 5 HOH 85 2085 2085 HOH HOH A . E 5 HOH 86 2086 2086 HOH HOH A . E 5 HOH 87 2087 2087 HOH HOH A . E 5 HOH 88 2088 2088 HOH HOH A . E 5 HOH 89 2089 2089 HOH HOH A . E 5 HOH 90 2090 2090 HOH HOH A . E 5 HOH 91 2091 2091 HOH HOH A . E 5 HOH 92 2092 2092 HOH HOH A . E 5 HOH 93 2093 2093 HOH HOH A . E 5 HOH 94 2094 2094 HOH HOH A . E 5 HOH 95 2095 2095 HOH HOH A . E 5 HOH 96 2096 2096 HOH HOH A . E 5 HOH 97 2097 2097 HOH HOH A . E 5 HOH 98 2098 2098 HOH HOH A . E 5 HOH 99 2099 2099 HOH HOH A . E 5 HOH 100 2100 2100 HOH HOH A . E 5 HOH 101 2101 2101 HOH HOH A . E 5 HOH 102 2102 2102 HOH HOH A . E 5 HOH 103 2103 2103 HOH HOH A . E 5 HOH 104 2104 2104 HOH HOH A . E 5 HOH 105 2105 2105 HOH HOH A . E 5 HOH 106 2106 2106 HOH HOH A . E 5 HOH 107 2107 2107 HOH HOH A . E 5 HOH 108 2108 2108 HOH HOH A . E 5 HOH 109 2109 2109 HOH HOH A . E 5 HOH 110 2110 2110 HOH HOH A . E 5 HOH 111 2111 2111 HOH HOH A . E 5 HOH 112 2112 2112 HOH HOH A . E 5 HOH 113 2113 2113 HOH HOH A . E 5 HOH 114 2114 2114 HOH HOH A . E 5 HOH 115 2115 2115 HOH HOH A . E 5 HOH 116 2116 2116 HOH HOH A . E 5 HOH 117 2117 2117 HOH HOH A . E 5 HOH 118 2118 2118 HOH HOH A . E 5 HOH 119 2119 2119 HOH HOH A . E 5 HOH 120 2120 2120 HOH HOH A . E 5 HOH 121 2121 2121 HOH HOH A . E 5 HOH 122 2122 2122 HOH HOH A . E 5 HOH 123 2123 2123 HOH HOH A . E 5 HOH 124 2124 2124 HOH HOH A . E 5 HOH 125 2125 2125 HOH HOH A . E 5 HOH 126 2126 2126 HOH HOH A . E 5 HOH 127 2127 2127 HOH HOH A . E 5 HOH 128 2128 2128 HOH HOH A . E 5 HOH 129 2129 2129 HOH HOH A . E 5 HOH 130 2130 2130 HOH HOH A . E 5 HOH 131 2131 2131 HOH HOH A . E 5 HOH 132 2132 2132 HOH HOH A . E 5 HOH 133 2133 2133 HOH HOH A . E 5 HOH 134 2134 2134 HOH HOH A . E 5 HOH 135 2135 2135 HOH HOH A . E 5 HOH 136 2136 2136 HOH HOH A . E 5 HOH 137 2137 2137 HOH HOH A . E 5 HOH 138 2138 2138 HOH HOH A . E 5 HOH 139 2139 2139 HOH HOH A . E 5 HOH 140 2140 2140 HOH HOH A . E 5 HOH 141 2141 2141 HOH HOH A . E 5 HOH 142 2142 2142 HOH HOH A . E 5 HOH 143 2143 2143 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3080 ? 1 MORE -141.0 ? 1 'SSA (A^2)' 10030 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 68 ? A ASP 62 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OD1 ? A ASP 72 ? A ASP 66 ? 1_555 82.5 ? 2 OD1 ? A ASP 68 ? A ASP 62 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 O ? E HOH . ? A HOH 2113 ? 1_555 162.2 ? 3 OD1 ? A ASP 72 ? A ASP 66 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 O ? E HOH . ? A HOH 2113 ? 1_555 79.8 ? 4 OD1 ? A ASP 68 ? A ASP 62 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OE2 ? A GLU 79 ? A GLU 73 ? 1_555 95.6 ? 5 OD1 ? A ASP 72 ? A ASP 66 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OE2 ? A GLU 79 ? A GLU 73 ? 1_555 156.6 ? 6 O ? E HOH . ? A HOH 2113 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OE2 ? A GLU 79 ? A GLU 73 ? 1_555 99.9 ? 7 OD1 ? A ASP 68 ? A ASP 62 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OE1 ? A GLU 79 ? A GLU 73 ? 1_555 114.1 ? 8 OD1 ? A ASP 72 ? A ASP 66 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OE1 ? A GLU 79 ? A GLU 73 ? 1_555 149.4 ? 9 O ? E HOH . ? A HOH 2113 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OE1 ? A GLU 79 ? A GLU 73 ? 1_555 82.6 ? 10 OE2 ? A GLU 79 ? A GLU 73 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OE1 ? A GLU 79 ? A GLU 73 ? 1_555 51.7 ? 11 OD1 ? A ASP 68 ? A ASP 62 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OD1 ? A ASN 70 ? A ASN 64 ? 1_555 84.9 ? 12 OD1 ? A ASP 72 ? A ASP 66 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OD1 ? A ASN 70 ? A ASN 64 ? 1_555 79.1 ? 13 O ? E HOH . ? A HOH 2113 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OD1 ? A ASN 70 ? A ASN 64 ? 1_555 90.0 ? 14 OE2 ? A GLU 79 ? A GLU 73 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OD1 ? A ASN 70 ? A ASN 64 ? 1_555 77.5 ? 15 OE1 ? A GLU 79 ? A GLU 73 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 OD1 ? A ASN 70 ? A ASN 64 ? 1_555 125.8 ? 16 OD1 ? A ASP 68 ? A ASP 62 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 O ? A LYS 74 ? A LYS 68 ? 1_555 84.7 ? 17 OD1 ? A ASP 72 ? A ASP 66 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 O ? A LYS 74 ? A LYS 68 ? 1_555 77.4 ? 18 O ? E HOH . ? A HOH 2113 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 O ? A LYS 74 ? A LYS 68 ? 1_555 93.2 ? 19 OE2 ? A GLU 79 ? A GLU 73 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 O ? A LYS 74 ? A LYS 68 ? 1_555 125.7 ? 20 OE1 ? A GLU 79 ? A GLU 73 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 O ? A LYS 74 ? A LYS 68 ? 1_555 78.8 ? 21 OD1 ? A ASN 70 ? A ASN 64 ? 1_555 CA ? B CA . ? A CA 1097 ? 1_555 O ? A LYS 74 ? A LYS 68 ? 1_555 155.4 ? 22 NE2 ? A HIS 92 ? A HIS 86 ? 1_555 ZN ? D ZN . ? A ZN 1099 ? 1_555 CL ? C CL . ? A CL 1098 ? 1_555 116.0 ? 23 NE2 ? A HIS 92 ? A HIS 86 ? 1_555 ZN ? D ZN . ? A ZN 1099 ? 1_555 NE2 ? A HIS 23 ? A HIS 17 ? 7_555 109.3 ? 24 CL ? C CL . ? A CL 1098 ? 1_555 ZN ? D ZN . ? A ZN 1099 ? 1_555 NE2 ? A HIS 23 ? A HIS 17 ? 7_555 110.4 ? 25 NE2 ? A HIS 92 ? A HIS 86 ? 1_555 ZN ? D ZN . ? A ZN 1099 ? 1_555 NE2 ? A HIS 96 ? A HIS 90 ? 1_555 103.1 ? 26 CL ? C CL . ? A CL 1098 ? 1_555 ZN ? D ZN . ? A ZN 1099 ? 1_555 NE2 ? A HIS 96 ? A HIS 90 ? 1_555 102.2 ? 27 NE2 ? A HIS 23 ? A HIS 17 ? 7_555 ZN ? D ZN . ? A ZN 1099 ? 1_555 NE2 ? A HIS 96 ? A HIS 90 ? 1_555 115.7 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-10-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0088 ? 1 d*TREK 'data reduction' . ? 2 MOLREP phasing . ? 3 # _pdbx_entry_details.entry_id 4AQJ _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, ASP 25 TO GLY' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2018 ? 5.87 . 2 1 O ? A HOH 2023 ? 6.20 . 3 1 O ? A HOH 2024 ? 5.81 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -5 ? A GLY 1 2 1 Y 1 A SER -4 ? A SER 2 3 1 Y 1 A ALA -3 ? A ALA 3 4 1 Y 1 A MET -2 ? A MET 4 5 1 Y 1 A GLY -1 ? A GLY 5 6 1 Y 1 A MET 0 ? A MET 6 7 1 Y 1 A GLY 97 ? A GLY 103 8 1 Y 1 A GLY 98 ? A GLY 104 9 1 Y 1 A SER 99 ? A SER 105 10 1 Y 1 A GLN 100 ? A GLN 106 11 1 Y 1 A ALA 101 ? A ALA 107 12 1 Y 1 A ALA 102 ? A ALA 108 13 1 Y 1 A ALA 103 ? A ALA 109 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'CHLORIDE ION' CL 4 'ZINC ION' ZN 5 water HOH #