HEADER HYDROLASE/INHIBITOR 23-APR-12 4ARF TITLE CRYSTAL STRUCTURE OF THE PEPTIDASE DOMAIN OF COLLAGENASE H FROM TITLE 2 CLOSTRIDIUM HISTOLYTICUM IN COMPLEX WITH THE PEPTIDIC INHIBITOR TITLE 3 ISOAMYLPHOSPHONYL-GLY-PRO-ALA AT 1.77 ANGSTROM RESOLUTION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLH PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PEPTIDASE DOMAIN, RESIDUES 331-721; COMPND 5 SYNONYM: COLLAGENASE; COMPND 6 EC: 3.4.24.3; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ISOAMYLPHOSPHONYL-GLY-PRO-ALA; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM HISTOLYTICUM; SOURCE 3 ORGANISM_TAXID: 1498; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-15B; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630 KEYWDS HYDROLASE-INHIBITOR COMPLEX, COLLAGENOLYSIS, HYDROLYSE, KEYWDS 2 METALLOPROTEASE, HEXXH EXPDTA X-RAY DIFFRACTION AUTHOR U.ECKHARD,H.BRANDSTETTER REVDAT 5 20-DEC-23 4ARF 1 LINK ATOM REVDAT 4 07-FEB-18 4ARF 1 REMARK HELIX SHEET LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 08-FEB-17 4ARF 1 SOURCE REVDAT 2 31-JUL-13 4ARF 1 JRNL REVDAT 1 05-JUN-13 4ARF 0 JRNL AUTH U.ECKHARD,E.SCHONAUER,H.BRANDSTETTER JRNL TITL STRUCTURAL BASIS FOR ACTIVITY REGULATION AND SUBSTRATE JRNL TITL 2 PREFERENCE OF CLOSTRIDIAL COLLAGENASES G, H, AND T. JRNL REF J.BIOL.CHEM. V. 288 20184 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23703618 JRNL DOI 10.1074/JBC.M112.448548 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 40273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2150 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.77 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2292 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 117 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3105 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 267 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : 1.50000 REMARK 3 B33 (A**2) : -1.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.339 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3190 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2167 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4304 ; 1.147 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5220 ; 0.823 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 379 ; 5.397 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 166 ;31.689 ;24.337 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 525 ;11.928 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;20.279 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 445 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3595 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 695 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5357 ; 2.961 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 85 ;23.143 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5463 ;13.040 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 342 A 356 REMARK 3 ORIGIN FOR THE GROUP (A): -13.9980 14.7608 -28.5202 REMARK 3 T TENSOR REMARK 3 T11: 0.0168 T22: 0.0653 REMARK 3 T33: 0.0345 T12: -0.0033 REMARK 3 T13: -0.0093 T23: 0.0396 REMARK 3 L TENSOR REMARK 3 L11: 2.1288 L22: 3.3866 REMARK 3 L33: 2.2718 L12: 2.0724 REMARK 3 L13: -1.7506 L23: -1.6843 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: -0.1249 S13: -0.1443 REMARK 3 S21: -0.0472 S22: -0.0161 S23: -0.0976 REMARK 3 S31: 0.0744 S32: -0.0442 S33: 0.0394 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 357 A 372 REMARK 3 ORIGIN FOR THE GROUP (A): -20.8268 15.5684 -21.8204 REMARK 3 T TENSOR REMARK 3 T11: 0.0555 T22: 0.0859 REMARK 3 T33: 0.0403 T12: -0.0189 REMARK 3 T13: 0.0039 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.0286 L22: 5.8735 REMARK 3 L33: 0.2119 L12: -0.2519 REMARK 3 L13: -0.0643 L23: 1.0295 REMARK 3 S TENSOR REMARK 3 S11: -0.0199 S12: 0.0037 S13: -0.0297 REMARK 3 S21: -0.0236 S22: -0.0509 S23: 0.3276 REMARK 3 S31: 0.0320 S32: -0.0361 S33: 0.0708 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 373 A 412 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8007 18.5219 -18.8348 REMARK 3 T TENSOR REMARK 3 T11: 0.0393 T22: 0.0590 REMARK 3 T33: 0.0355 T12: 0.0012 REMARK 3 T13: -0.0124 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.2410 L22: 0.1683 REMARK 3 L33: 0.2927 L12: -0.0616 REMARK 3 L13: -0.0539 L23: 0.2190 REMARK 3 S TENSOR REMARK 3 S11: 0.0055 S12: -0.0292 S13: -0.0082 REMARK 3 S21: 0.0072 S22: -0.0046 S23: -0.0099 REMARK 3 S31: 0.0011 S32: -0.0124 S33: -0.0009 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 413 A 419 REMARK 3 ORIGIN FOR THE GROUP (A): -7.4681 -2.0062 -19.2159 REMARK 3 T TENSOR REMARK 3 T11: 0.1236 T22: 0.2435 REMARK 3 T33: 0.2635 T12: 0.0126 REMARK 3 T13: 0.0644 T23: -0.0696 REMARK 3 L TENSOR REMARK 3 L11: 23.0189 L22: 12.1256 REMARK 3 L33: 1.6628 L12: 0.3358 REMARK 3 L13: 6.1715 L23: -0.2248 REMARK 3 S TENSOR REMARK 3 S11: 0.6745 S12: -0.3007 S13: 2.4223 REMARK 3 S21: 0.4313 S22: -1.2591 S23: 0.2490 REMARK 3 S31: 0.1870 S32: -0.0482 S33: 0.5846 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 420 A 427 REMARK 3 ORIGIN FOR THE GROUP (A): -6.5493 1.6723 -12.2576 REMARK 3 T TENSOR REMARK 3 T11: 0.1156 T22: 0.1016 REMARK 3 T33: 0.1548 T12: 0.0659 REMARK 3 T13: 0.0469 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.3600 L22: 19.2883 REMARK 3 L33: 3.6360 L12: 1.1689 REMARK 3 L13: 0.4372 L23: 2.8178 REMARK 3 S TENSOR REMARK 3 S11: -0.1538 S12: -0.0351 S13: -0.3275 REMARK 3 S21: 0.5087 S22: 0.0926 S23: -1.2030 REMARK 3 S31: 0.5210 S32: 0.3141 S33: 0.0613 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 428 A 445 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5523 8.1862 -15.7892 REMARK 3 T TENSOR REMARK 3 T11: 0.0637 T22: 0.0864 REMARK 3 T33: 0.0250 T12: 0.0164 REMARK 3 T13: -0.0113 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 3.4920 L22: 1.2732 REMARK 3 L33: 1.3260 L12: 1.1037 REMARK 3 L13: -1.6576 L23: 0.1102 REMARK 3 S TENSOR REMARK 3 S11: -0.0962 S12: -0.0129 S13: -0.2064 REMARK 3 S21: 0.0604 S22: -0.0390 S23: -0.0401 REMARK 3 S31: 0.0377 S32: -0.0709 S33: 0.1351 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 446 A 469 REMARK 3 ORIGIN FOR THE GROUP (A): -6.7316 16.8135 -13.8895 REMARK 3 T TENSOR REMARK 3 T11: 0.0540 T22: 0.0648 REMARK 3 T33: 0.0118 T12: 0.0056 REMARK 3 T13: -0.0168 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.7323 L22: 0.3673 REMARK 3 L33: 0.0948 L12: 0.1990 REMARK 3 L13: 0.0280 L23: 0.1744 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: -0.0161 S13: 0.0398 REMARK 3 S21: 0.0397 S22: 0.0005 S23: 0.0001 REMARK 3 S31: 0.0063 S32: -0.0029 S33: 0.0018 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 470 A 477 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1340 10.2915 -14.3460 REMARK 3 T TENSOR REMARK 3 T11: 0.0516 T22: 0.0426 REMARK 3 T33: 0.0493 T12: -0.0186 REMARK 3 T13: -0.0102 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 3.7402 L22: 3.6278 REMARK 3 L33: 7.6564 L12: 0.0294 REMARK 3 L13: 2.9036 L23: 3.0091 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: 0.1122 S13: -0.1991 REMARK 3 S21: 0.2276 S22: 0.0976 S23: 0.2214 REMARK 3 S31: 0.3318 S32: 0.2673 S33: -0.0887 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 478 A 487 REMARK 3 ORIGIN FOR THE GROUP (A): 5.9120 12.8602 -5.5268 REMARK 3 T TENSOR REMARK 3 T11: 0.0247 T22: 0.0907 REMARK 3 T33: 0.0219 T12: -0.0116 REMARK 3 T13: -0.0047 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 1.5113 L22: 0.3337 REMARK 3 L33: 1.7072 L12: 0.6572 REMARK 3 L13: -1.0372 L23: -0.2326 REMARK 3 S TENSOR REMARK 3 S11: -0.0833 S12: 0.0534 S13: -0.0786 REMARK 3 S21: -0.0447 S22: 0.0639 S23: -0.0421 REMARK 3 S31: 0.0200 S32: 0.1476 S33: 0.0194 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 488 A 517 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5364 20.5016 -0.5684 REMARK 3 T TENSOR REMARK 3 T11: 0.0464 T22: 0.0591 REMARK 3 T33: 0.0303 T12: 0.0085 REMARK 3 T13: -0.0166 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.2220 L22: 0.5602 REMARK 3 L33: 1.1990 L12: 0.3457 REMARK 3 L13: -0.3722 L23: -0.4688 REMARK 3 S TENSOR REMARK 3 S11: -0.0068 S12: 0.0172 S13: 0.0117 REMARK 3 S21: 0.0076 S22: 0.0236 S23: 0.0176 REMARK 3 S31: 0.0583 S32: -0.0228 S33: -0.0168 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 518 A 547 REMARK 3 ORIGIN FOR THE GROUP (A): -1.4346 13.0706 3.5524 REMARK 3 T TENSOR REMARK 3 T11: 0.0316 T22: 0.0531 REMARK 3 T33: 0.0237 T12: 0.0065 REMARK 3 T13: 0.0007 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.5906 L22: 0.7170 REMARK 3 L33: 1.3425 L12: 0.1569 REMARK 3 L13: -0.1151 L23: 0.6694 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: -0.0279 S13: -0.0383 REMARK 3 S21: -0.0219 S22: -0.0069 S23: 0.0036 REMARK 3 S31: 0.0876 S32: 0.0992 S33: 0.0043 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 548 A 574 REMARK 3 ORIGIN FOR THE GROUP (A): 7.9823 24.5009 -4.0794 REMARK 3 T TENSOR REMARK 3 T11: 0.0397 T22: 0.0697 REMARK 3 T33: 0.0582 T12: -0.0133 REMARK 3 T13: 0.0041 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 1.6648 L22: 0.7949 REMARK 3 L33: 0.6613 L12: -0.9335 REMARK 3 L13: -0.9225 L23: 0.6899 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: -0.0877 S13: 0.0766 REMARK 3 S21: -0.0603 S22: 0.0597 S23: -0.0073 REMARK 3 S31: -0.0503 S32: 0.0680 S33: -0.0684 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 575 A 584 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9967 20.6671 7.7092 REMARK 3 T TENSOR REMARK 3 T11: 0.0131 T22: 0.1083 REMARK 3 T33: 0.0216 T12: -0.0050 REMARK 3 T13: -0.0007 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 5.9325 L22: 6.2068 REMARK 3 L33: 17.2498 L12: -5.2517 REMARK 3 L13: -9.0790 L23: 7.7193 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: -0.3100 S13: 0.0780 REMARK 3 S21: -0.0027 S22: 0.1537 S23: -0.0456 REMARK 3 S31: 0.1934 S32: 0.6644 S33: -0.1466 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 585 A 605 REMARK 3 ORIGIN FOR THE GROUP (A): -10.0089 22.5010 7.6496 REMARK 3 T TENSOR REMARK 3 T11: 0.0423 T22: 0.0467 REMARK 3 T33: 0.0358 T12: -0.0121 REMARK 3 T13: -0.0143 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.2946 L22: 0.1022 REMARK 3 L33: 2.0873 L12: -0.2810 REMARK 3 L13: 1.1128 L23: -0.3155 REMARK 3 S TENSOR REMARK 3 S11: 0.0155 S12: 0.0085 S13: 0.0473 REMARK 3 S21: -0.0346 S22: 0.0258 S23: 0.0096 REMARK 3 S31: -0.0602 S32: -0.0723 S33: -0.0413 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 606 A 615 REMARK 3 ORIGIN FOR THE GROUP (A): -24.7252 27.0199 -18.5463 REMARK 3 T TENSOR REMARK 3 T11: 0.0547 T22: 0.0703 REMARK 3 T33: 0.0158 T12: 0.0209 REMARK 3 T13: -0.0093 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 5.2505 L22: 2.6942 REMARK 3 L33: 4.8245 L12: -1.8278 REMARK 3 L13: 4.6912 L23: -2.7716 REMARK 3 S TENSOR REMARK 3 S11: -0.0153 S12: -0.2157 S13: -0.0804 REMARK 3 S21: -0.0232 S22: 0.1329 S23: 0.0884 REMARK 3 S31: 0.0175 S32: -0.2172 S33: -0.1176 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 616 A 636 REMARK 3 ORIGIN FOR THE GROUP (A): -14.5438 43.8463 -24.9842 REMARK 3 T TENSOR REMARK 3 T11: 0.0264 T22: 0.0425 REMARK 3 T33: 0.1678 T12: -0.0290 REMARK 3 T13: -0.0162 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.4551 L22: 1.3311 REMARK 3 L33: 0.0416 L12: 1.0808 REMARK 3 L13: 0.2451 L23: 0.1738 REMARK 3 S TENSOR REMARK 3 S11: -0.1014 S12: 0.0946 S13: 0.3112 REMARK 3 S21: -0.0677 S22: 0.0441 S23: 0.0058 REMARK 3 S31: -0.0157 S32: 0.0149 S33: 0.0573 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 637 A 665 REMARK 3 ORIGIN FOR THE GROUP (A): -6.9319 35.8299 -20.7734 REMARK 3 T TENSOR REMARK 3 T11: 0.0460 T22: 0.0574 REMARK 3 T33: 0.0435 T12: -0.0141 REMARK 3 T13: 0.0073 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.1480 L22: 0.4976 REMARK 3 L33: 1.4968 L12: 0.1734 REMARK 3 L13: 1.0149 L23: 0.6830 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: 0.0013 S13: -0.0395 REMARK 3 S21: 0.0433 S22: 0.0470 S23: -0.0225 REMARK 3 S31: 0.0370 S32: 0.0600 S33: -0.0408 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 666 A 685 REMARK 3 ORIGIN FOR THE GROUP (A): -12.0593 40.6985 -10.3413 REMARK 3 T TENSOR REMARK 3 T11: 0.0429 T22: 0.0486 REMARK 3 T33: 0.0740 T12: -0.0068 REMARK 3 T13: -0.0186 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 7.4915 L22: 0.0597 REMARK 3 L33: 1.7769 L12: 0.0425 REMARK 3 L13: 2.4692 L23: 0.2401 REMARK 3 S TENSOR REMARK 3 S11: -0.0756 S12: -0.1808 S13: 0.1778 REMARK 3 S21: 0.0115 S22: -0.0216 S23: -0.0101 REMARK 3 S31: 0.0002 S32: -0.1547 S33: 0.0972 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 686 A 715 REMARK 3 ORIGIN FOR THE GROUP (A): -5.7137 39.3054 -16.4664 REMARK 3 T TENSOR REMARK 3 T11: 0.0305 T22: 0.0496 REMARK 3 T33: 0.0546 T12: -0.0153 REMARK 3 T13: 0.0021 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.7789 L22: 0.4613 REMARK 3 L33: 0.9949 L12: 0.3794 REMARK 3 L13: 0.8614 L23: 0.6507 REMARK 3 S TENSOR REMARK 3 S11: -0.0277 S12: 0.0695 S13: 0.0664 REMARK 3 S21: 0.0078 S22: 0.0476 S23: -0.0410 REMARK 3 S31: 0.0091 S32: 0.0645 S33: -0.0199 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 716 A 721 REMARK 3 ORIGIN FOR THE GROUP (A): -20.4970 33.4497 -31.8078 REMARK 3 T TENSOR REMARK 3 T11: 0.0775 T22: 0.0838 REMARK 3 T33: 0.0636 T12: 0.0133 REMARK 3 T13: 0.0485 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 9.8626 L22: 0.9012 REMARK 3 L33: 18.1945 L12: -0.2944 REMARK 3 L13: 8.5561 L23: -3.3502 REMARK 3 S TENSOR REMARK 3 S11: -0.1651 S12: 0.3651 S13: -0.0527 REMARK 3 S21: -0.0778 S22: 0.1400 S23: -0.0345 REMARK 3 S31: 0.1055 S32: -0.2334 S33: 0.0252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4ARF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-APR-12. REMARK 100 THE DEPOSITION ID IS D_1290052157. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42481 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2Y3U REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22.5% PEG3350, 0.15M SODIUM FORMATE, REMARK 280 PH 7.25 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.93500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.39000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.93500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.39000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1130 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 328 REMARK 465 GLY A 329 REMARK 465 THR A 330 REMARK 465 LEU A 331 REMARK 465 ASP A 332 REMARK 465 LYS A 333 REMARK 465 PHE A 334 REMARK 465 LYS A 335 REMARK 465 LYS A 336 REMARK 465 GLU A 337 REMARK 465 GLY A 338 REMARK 465 LYS A 339 REMARK 465 GLU A 340 REMARK 465 LYS A 341 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 342 CE1 CZ OH REMARK 470 LYS A 345 CE NZ REMARK 470 GLU A 365 CD OE1 OE2 REMARK 470 GLU A 409 CD OE1 OE2 REMARK 470 LYS A 412 CD CE NZ REMARK 470 VAL A 416 CG1 CG2 REMARK 470 LEU A 417 CD1 REMARK 470 TYR A 418 CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 420 CE1 CE2 CZ OH REMARK 470 ASP A 421 OD1 OD2 REMARK 470 ASN A 423 OD1 ND2 REMARK 470 LYS A 475 CE NZ REMARK 470 ARG A 576 NE CZ NH1 NH2 REMARK 470 GLU A 629 CD OE1 OE2 REMARK 470 LYS A 634 NZ REMARK 470 LYS A 637 CE NZ REMARK 470 LYS A 642 CE NZ REMARK 470 LYS A 668 NZ REMARK 470 LYS A 680 CE NZ REMARK 470 LYS A 700 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1132 O HOH A 1132 2565 0.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 388 27.41 -143.55 REMARK 500 ASP A 397 4.70 -69.41 REMARK 500 ASP A 552 59.52 -157.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1164 DISTANCE = 6.00 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 802 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 430 OE2 REMARK 620 2 GLY A 463 O 80.0 REMARK 620 3 VAL A 467 O 156.2 89.1 REMARK 620 4 GLY A 469 O 93.2 167.6 100.9 REMARK 620 5 HOH A 945 O 78.2 101.8 83.5 86.8 REMARK 620 6 HOH A 974 O 104.9 82.0 94.3 89.9 175.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 455 NE2 REMARK 620 2 HIS A 459 NE2 103.3 REMARK 620 3 GLU A 487 OE1 102.9 103.5 REMARK 620 4 IP8 B 1 O2 107.6 136.2 99.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AR1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PEPTIDASE DOMAIN OF COLLAGENASE H FROM REMARK 900 CLOSTRIDIUM HISTOLYTICUM AT 2.01 ANGSTROM RESOLUTION. DBREF 4ARF A 331 721 UNP Q46085 Q46085_CLOHI 331 721 DBREF 4ARF B 1 4 PDB 4ARF 4ARF 1 4 SEQADV 4ARF GLY A 328 UNP Q46085 EXPRESSION TAG SEQADV 4ARF GLY A 329 UNP Q46085 EXPRESSION TAG SEQADV 4ARF THR A 330 UNP Q46085 EXPRESSION TAG SEQADV 4ARF HIS A 582 UNP Q46085 TYR 582 VARIANT SEQADV 4ARF VAL A 659 UNP Q46085 ALA 659 VARIANT SEQADV 4ARF LYS A 706 UNP Q46085 ARG 706 VARIANT SEQRES 1 A 394 GLY GLY THR LEU ASP LYS PHE LYS LYS GLU GLY LYS GLU SEQRES 2 A 394 LYS TYR CYS PRO LYS THR TYR THR PHE ASP ASP GLY LYS SEQRES 3 A 394 VAL ILE ILE LYS ALA GLY ALA ARG VAL GLU GLU GLU LYS SEQRES 4 A 394 VAL LYS ARG LEU TYR TRP ALA SER LYS GLU VAL ASN SER SEQRES 5 A 394 GLN PHE PHE ARG VAL TYR GLY ILE ASP LYS PRO LEU GLU SEQRES 6 A 394 GLU GLY ASN PRO ASP ASP ILE LEU THR MET VAL ILE TYR SEQRES 7 A 394 ASN SER PRO GLU GLU TYR LYS LEU ASN SER VAL LEU TYR SEQRES 8 A 394 GLY TYR ASP THR ASN ASN GLY GLY MET TYR ILE GLU PRO SEQRES 9 A 394 GLU GLY THR PHE PHE THR TYR GLU ARG GLU ALA GLN GLU SEQRES 10 A 394 SER THR TYR THR LEU GLU GLU LEU PHE ARG HIS GLU TYR SEQRES 11 A 394 THR HIS TYR LEU GLN GLY ARG TYR ALA VAL PRO GLY GLN SEQRES 12 A 394 TRP GLY ARG THR LYS LEU TYR ASP ASN ASP ARG LEU THR SEQRES 13 A 394 TRP TYR GLU GLU GLY GLY ALA GLU LEU PHE ALA GLY SER SEQRES 14 A 394 THR ARG THR SER GLY ILE LEU PRO ARG LYS SER ILE VAL SEQRES 15 A 394 SER ASN ILE HIS ASN THR THR ARG ASN ASN ARG TYR LYS SEQRES 16 A 394 LEU SER ASP THR VAL HIS SER LYS TYR GLY ALA SER PHE SEQRES 17 A 394 GLU PHE TYR ASN TYR ALA CYS MET PHE MET ASP TYR MET SEQRES 18 A 394 TYR ASN LYS ASP MET GLY ILE LEU ASN LYS LEU ASN ASP SEQRES 19 A 394 LEU ALA LYS ASN ASN ASP VAL ASP GLY TYR ASP ASN TYR SEQRES 20 A 394 ILE ARG ASP LEU SER SER ASN HIS ALA LEU ASN ASP LYS SEQRES 21 A 394 TYR GLN ASP HIS MET GLN GLU ARG ILE ASP ASN TYR GLU SEQRES 22 A 394 ASN LEU THR VAL PRO PHE VAL ALA ASP ASP TYR LEU VAL SEQRES 23 A 394 ARG HIS ALA TYR LYS ASN PRO ASN GLU ILE TYR SER GLU SEQRES 24 A 394 ILE SER GLU VAL ALA LYS LEU LYS ASP ALA LYS SER GLU SEQRES 25 A 394 VAL LYS LYS SER GLN TYR PHE SER THR PHE THR LEU ARG SEQRES 26 A 394 GLY SER TYR THR GLY GLY VAL SER LYS GLY LYS LEU GLU SEQRES 27 A 394 ASP GLN LYS ALA MET ASN LYS PHE ILE ASP ASP SER LEU SEQRES 28 A 394 LYS LYS LEU ASP THR TYR SER TRP SER GLY TYR LYS THR SEQRES 29 A 394 LEU THR ALA TYR PHE THR ASN TYR LYS VAL ASP SER SER SEQRES 30 A 394 ASN LYS VAL THR TYR ASP VAL VAL PHE HIS GLY TYR LEU SEQRES 31 A 394 PRO ASN GLU GLY SEQRES 1 B 4 IP8 GLY PRO ALA HET IP8 B 1 9 HET ZN A 801 1 HET CA A 802 1 HETNAM IP8 ISOPENTENYL PHOSPHATE HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETSYN IP8 3-METHYLBUT-3-EN-1-YL DIHYDROGEN PHOSPHATE FORMUL 2 IP8 C5 H11 O4 P FORMUL 3 ZN ZN 2+ FORMUL 4 CA CA 2+ FORMUL 5 HOH *267(H2 O) HELIX 1 AA1 GLU A 363 GLY A 386 1 24 HELIX 2 AA2 ASN A 395 ILE A 399 5 5 HELIX 3 AA3 SER A 407 SER A 415 1 9 HELIX 4 AA4 GLU A 430 GLU A 432 5 3 HELIX 5 AA5 GLU A 441 SER A 445 5 5 HELIX 6 AA6 THR A 448 ALA A 466 1 19 HELIX 7 AA7 THR A 474 ARG A 481 5 8 HELIX 8 AA8 LEU A 482 ALA A 494 1 13 HELIX 9 AA9 ARG A 505 SER A 510 1 6 HELIX 10 AB1 THR A 516 ARG A 520 5 5 HELIX 11 AB2 LYS A 522 VAL A 527 1 6 HELIX 12 AB3 PHE A 535 ASP A 552 1 18 HELIX 13 AB4 ASP A 552 ASN A 565 1 14 HELIX 14 AB5 ASP A 567 SER A 580 1 14 HELIX 15 AB6 ASN A 581 ASN A 598 1 18 HELIX 16 AB7 TYR A 599 LEU A 602 5 4 HELIX 17 AB8 ALA A 608 VAL A 613 5 6 HELIX 18 AB9 ASN A 619 ALA A 631 1 13 HELIX 19 AC1 GLY A 662 ASP A 682 1 21 HELIX 20 AC2 TRP A 686 LEU A 692 5 7 SHEET 1 AA1 5 LYS A 345 PHE A 349 0 SHEET 2 AA1 5 VAL A 354 ALA A 358 -1 O ILE A 356 N TYR A 347 SHEET 3 AA1 5 LEU A 400 TYR A 405 1 O MET A 402 N ILE A 355 SHEET 4 AA1 5 THR A 434 TYR A 438 1 O PHE A 435 N VAL A 403 SHEET 5 AA1 5 GLY A 426 ILE A 429 -1 N ILE A 429 O THR A 434 SHEET 1 AA2 4 LYS A 634 LYS A 642 0 SHEET 2 AA2 4 SER A 647 VAL A 659 -1 O SER A 654 N LYS A 634 SHEET 3 AA2 4 LYS A 706 LEU A 717 -1 O VAL A 707 N GLY A 657 SHEET 4 AA2 4 THR A 693 VAL A 701 -1 N THR A 697 O ASP A 710 LINK P1 IP8 B 1 N GLY B 2 1555 1555 1.73 LINK OE2 GLU A 430 CA CA A 802 1555 1555 2.34 LINK NE2 HIS A 455 ZN ZN A 801 1555 1555 2.06 LINK NE2 HIS A 459 ZN ZN A 801 1555 1555 2.03 LINK O GLY A 463 CA CA A 802 1555 1555 2.32 LINK O VAL A 467 CA CA A 802 1555 1555 2.31 LINK O GLY A 469 CA CA A 802 1555 1555 2.31 LINK OE1 GLU A 487 ZN ZN A 801 1555 1555 2.00 LINK ZN ZN A 801 O2 IP8 B 1 1555 1555 1.98 LINK CA CA A 802 O HOH A 945 1555 1555 2.41 LINK CA CA A 802 O HOH A 974 1555 1555 2.36 SITE 1 AC1 4 HIS A 455 HIS A 459 GLU A 487 IP8 B 1 SITE 1 AC2 6 GLU A 430 GLY A 463 VAL A 467 GLY A 469 SITE 2 AC2 6 HOH A 945 HOH A 974 CRYST1 79.870 106.780 51.350 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012520 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009365 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019474 0.00000