data_4ATG # _entry.id 4ATG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4ATG PDBE EBI-52380 WWPDB D_1290052380 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4ATG _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-05-07 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Romier, C.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'TFIID Taf6-Taf9 Complex Formation Involves the Heat Repeat-Containing C-Terminal Domain of Taf6 and is Modulated by Taf5 Protein.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 287 _citation.page_first 27580 _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22696218 _citation.pdbx_database_id_DOI 10.1074/JBC.M112.379206 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Scheer, E.' 1 primary 'Delbac, F.' 2 primary 'Tora, L.' 3 primary 'Moras, D.' 4 primary 'Romier, C.' 5 # _cell.entry_id 4ATG _cell.length_a 33.792 _cell.length_b 50.685 _cell.length_c 67.293 _cell.angle_alpha 90.00 _cell.angle_beta 100.81 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ATG _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man TAF6 22634.561 1 ? ? 'C-TERMINAL DOMAIN, RESIDUES 160-355' ? 2 non-polymer syn '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' 207.290 2 ? ? ? ? 3 water nat water 18.015 185 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMLPKELQLYFDKILSMIKSDMKDIAIECLEKESGLQQLVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKNKHVF IDPYLHQILPSLLTCVIGKSIVDDDVRKMSADIVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSIL SKNVVNTVIREHAEEYKRTIGKKKVTNLLDNVLNVH ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMLPKELQLYFDKILSMIKSDMKDIAIECLEKESGLQQLVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKNKHVF IDPYLHQILPSLLTCVIGKSIVDDDVRKMSADIVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSIL SKNVVNTVIREHAEEYKRTIGKKKVTNLLDNVLNVH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 LEU n 1 6 PRO n 1 7 LYS n 1 8 GLU n 1 9 LEU n 1 10 GLN n 1 11 LEU n 1 12 TYR n 1 13 PHE n 1 14 ASP n 1 15 LYS n 1 16 ILE n 1 17 LEU n 1 18 SER n 1 19 MET n 1 20 ILE n 1 21 LYS n 1 22 SER n 1 23 ASP n 1 24 MET n 1 25 LYS n 1 26 ASP n 1 27 ILE n 1 28 ALA n 1 29 ILE n 1 30 GLU n 1 31 CYS n 1 32 LEU n 1 33 GLU n 1 34 LYS n 1 35 GLU n 1 36 SER n 1 37 GLY n 1 38 LEU n 1 39 GLN n 1 40 GLN n 1 41 LEU n 1 42 VAL n 1 43 PRO n 1 44 TYR n 1 45 PHE n 1 46 ILE n 1 47 GLN n 1 48 HIS n 1 49 ILE n 1 50 SER n 1 51 GLU n 1 52 LEU n 1 53 ILE n 1 54 LEU n 1 55 LYS n 1 56 SER n 1 57 PHE n 1 58 LYS n 1 59 GLU n 1 60 ALA n 1 61 GLU n 1 62 VAL n 1 63 LEU n 1 64 LYS n 1 65 THR n 1 66 CYS n 1 67 ILE n 1 68 ALA n 1 69 LEU n 1 70 TYR n 1 71 PHE n 1 72 SER n 1 73 LEU n 1 74 ILE n 1 75 LYS n 1 76 ASN n 1 77 LYS n 1 78 HIS n 1 79 VAL n 1 80 PHE n 1 81 ILE n 1 82 ASP n 1 83 PRO n 1 84 TYR n 1 85 LEU n 1 86 HIS n 1 87 GLN n 1 88 ILE n 1 89 LEU n 1 90 PRO n 1 91 SER n 1 92 LEU n 1 93 LEU n 1 94 THR n 1 95 CYS n 1 96 VAL n 1 97 ILE n 1 98 GLY n 1 99 LYS n 1 100 SER n 1 101 ILE n 1 102 VAL n 1 103 ASP n 1 104 ASP n 1 105 ASP n 1 106 VAL n 1 107 ARG n 1 108 LYS n 1 109 MET n 1 110 SER n 1 111 ALA n 1 112 ASP n 1 113 ILE n 1 114 VAL n 1 115 LYS n 1 116 TYR n 1 117 ILE n 1 118 TYR n 1 119 ASP n 1 120 THR n 1 121 TYR n 1 122 SER n 1 123 ARG n 1 124 SER n 1 125 TYR n 1 126 LYS n 1 127 THR n 1 128 LEU n 1 129 ALA n 1 130 PRO n 1 131 ARG n 1 132 VAL n 1 133 LEU n 1 134 LYS n 1 135 THR n 1 136 LEU n 1 137 LYS n 1 138 GLY n 1 139 VAL n 1 140 TRP n 1 141 MET n 1 142 ASP n 1 143 PRO n 1 144 ASN n 1 145 ARG n 1 146 SER n 1 147 GLU n 1 148 ASP n 1 149 SER n 1 150 GLN n 1 151 TYR n 1 152 GLY n 1 153 ALA n 1 154 LEU n 1 155 TYR n 1 156 CYS n 1 157 LEU n 1 158 SER n 1 159 ILE n 1 160 LEU n 1 161 SER n 1 162 LYS n 1 163 ASN n 1 164 VAL n 1 165 VAL n 1 166 ASN n 1 167 THR n 1 168 VAL n 1 169 ILE n 1 170 ARG n 1 171 GLU n 1 172 HIS n 1 173 ALA n 1 174 GLU n 1 175 GLU n 1 176 TYR n 1 177 LYS n 1 178 ARG n 1 179 THR n 1 180 ILE n 1 181 GLY n 1 182 LYS n 1 183 LYS n 1 184 LYS n 1 185 VAL n 1 186 THR n 1 187 ASN n 1 188 LEU n 1 189 LEU n 1 190 ASP n 1 191 ASN n 1 192 VAL n 1 193 LEU n 1 194 ASN n 1 195 VAL n 1 196 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ANTONOSPORA LOCUSTAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 278021 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET-MCN _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PNEA-TH _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4ATG _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession 4ATG _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4ATG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 196 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4ATG _struct_ref_seq.db_align_beg 160 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 355 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 160 _struct_ref_seq.pdbx_auth_seq_align_end 355 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4ATG GLY A 1 ? PDB 4ATG ? ? 'SEE REMARK 999' 160 1 1 4ATG SER A 2 ? PDB 4ATG ? ? 'SEE REMARK 999' 161 2 1 4ATG HIS A 3 ? PDB 4ATG ? ? 'SEE REMARK 999' 162 3 1 4ATG MET A 4 ? PDB 4ATG ? ? 'SEE REMARK 999' 163 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NHE non-polymer . '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' 'N-CYCLOHEXYLTAURINE; CHES' 'C8 H17 N O3 S' 207.290 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4ATG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 51 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M CHES PH 9.5, 10% (W/V) PEG 3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-11-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97930 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength 0.97930 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4ATG _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.89 _reflns.number_obs 17911 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30.60 _reflns.B_iso_Wilson_estimate 25.09 _reflns.pdbx_redundancy 3.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.89 _reflns_shell.d_res_low 1.94 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.34 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.80 _reflns_shell.pdbx_redundancy 3.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4ATG _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17887 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 18.46 _refine.ls_d_res_high 1.89 _refine.ls_percent_reflns_obs 99.22 _refine.ls_R_factor_obs 0.1711 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1687 _refine.ls_R_factor_R_free 0.2151 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.12 _refine.ls_number_reflns_R_free 915 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.9560 _refine.correlation_coeff_Fo_to_Fc_free 0.9311 _refine.B_iso_mean 30.16 _refine.aniso_B[1][1] 0.8543 _refine.aniso_B[2][2] 0.6527 _refine.aniso_B[3][3] -1.5069 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -1.1820 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.131 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.129 _refine.pdbx_overall_SU_R_Blow_DPI 0.138 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.132 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4ATG _refine_analyze.Luzzati_coordinate_error_obs 0.236 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1577 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 185 _refine_hist.number_atoms_total 1788 _refine_hist.d_res_high 1.89 _refine_hist.d_res_low 18.46 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 1661 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 0.95 ? 2.00 2247 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 622 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 36 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 232 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 1661 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 2.94 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 14.61 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 220 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 2143 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 9 _refine_ls_shell.d_res_high 1.89 _refine_ls_shell.d_res_low 2.00 _refine_ls_shell.number_reflns_R_work 2676 _refine_ls_shell.R_factor_R_work 0.1786 _refine_ls_shell.percent_reflns_obs 99.22 _refine_ls_shell.R_factor_R_free 0.2235 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.34 _refine_ls_shell.number_reflns_R_free 151 _refine_ls_shell.number_reflns_all 2827 _refine_ls_shell.R_factor_all 0.1810 # _struct.entry_id 4ATG _struct.title 'TAF6 C-terminal domain from Antonospora locustae' _struct.pdbx_descriptor TAF6 _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4ATG _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'TRANSCRIPTION, TFIID' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? LEU A 5 ? GLY A 160 LEU A 164 5 ? 5 HELX_P HELX_P2 2 PRO A 6 ? ILE A 20 ? PRO A 165 ILE A 179 1 ? 15 HELX_P HELX_P3 3 MET A 24 ? GLU A 35 ? MET A 183 GLU A 194 1 ? 12 HELX_P HELX_P4 4 LEU A 41 ? SER A 56 ? LEU A 200 SER A 215 1 ? 16 HELX_P HELX_P5 5 GLU A 59 ? ASN A 76 ? GLU A 218 ASN A 235 1 ? 18 HELX_P HELX_P6 6 ILE A 81 ? PRO A 83 ? ILE A 240 PRO A 242 5 ? 3 HELX_P HELX_P7 7 TYR A 84 ? GLY A 98 ? TYR A 243 GLY A 257 1 ? 15 HELX_P HELX_P8 8 ASP A 103 ? SER A 122 ? ASP A 262 SER A 281 1 ? 20 HELX_P HELX_P9 9 THR A 127 ? MET A 141 ? THR A 286 MET A 300 1 ? 15 HELX_P HELX_P10 10 SER A 146 ? SER A 161 ? SER A 305 SER A 320 1 ? 16 HELX_P HELX_P11 11 SER A 161 ? THR A 167 ? SER A 320 THR A 326 1 ? 7 HELX_P HELX_P12 12 THR A 167 ? ILE A 180 ? THR A 326 ILE A 339 1 ? 14 HELX_P HELX_P13 13 LYS A 182 ? VAL A 195 ? LYS A 341 VAL A 354 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE NHE A 400' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE NHE A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 124 ? SER A 283 . ? 1_555 ? 2 AC1 3 TYR A 125 ? TYR A 284 . ? 1_555 ? 3 AC1 3 LYS A 126 ? LYS A 285 . ? 1_555 ? 4 AC2 9 LEU A 89 ? LEU A 248 . ? 1_555 ? 5 AC2 9 PRO A 90 ? PRO A 249 . ? 1_555 ? 6 AC2 9 LEU A 93 ? LEU A 252 . ? 1_555 ? 7 AC2 9 THR A 94 ? THR A 253 . ? 1_555 ? 8 AC2 9 ARG A 131 ? ARG A 290 . ? 1_555 ? 9 AC2 9 VAL A 132 ? VAL A 291 . ? 1_555 ? 10 AC2 9 THR A 135 ? THR A 294 . ? 1_555 ? 11 AC2 9 ASN A 194 ? ASN A 353 . ? 1_455 ? 12 AC2 9 HOH D . ? HOH A 2104 . ? 1_555 ? # _database_PDB_matrix.entry_id 4ATG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4ATG _atom_sites.fract_transf_matrix[1][1] 0.029593 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005650 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019730 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015129 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 160 160 GLY GLY A . n A 1 2 SER 2 161 161 SER SER A . n A 1 3 HIS 3 162 162 HIS HIS A . n A 1 4 MET 4 163 163 MET MET A . n A 1 5 LEU 5 164 164 LEU LEU A . n A 1 6 PRO 6 165 165 PRO PRO A . n A 1 7 LYS 7 166 166 LYS LYS A . n A 1 8 GLU 8 167 167 GLU GLU A . n A 1 9 LEU 9 168 168 LEU LEU A . n A 1 10 GLN 10 169 169 GLN GLN A . n A 1 11 LEU 11 170 170 LEU LEU A . n A 1 12 TYR 12 171 171 TYR TYR A . n A 1 13 PHE 13 172 172 PHE PHE A . n A 1 14 ASP 14 173 173 ASP ASP A . n A 1 15 LYS 15 174 174 LYS LYS A . n A 1 16 ILE 16 175 175 ILE ILE A . n A 1 17 LEU 17 176 176 LEU LEU A . n A 1 18 SER 18 177 177 SER SER A . n A 1 19 MET 19 178 178 MET MET A . n A 1 20 ILE 20 179 179 ILE ILE A . n A 1 21 LYS 21 180 180 LYS LYS A . n A 1 22 SER 22 181 181 SER SER A . n A 1 23 ASP 23 182 182 ASP ASP A . n A 1 24 MET 24 183 183 MET MET A . n A 1 25 LYS 25 184 184 LYS LYS A . n A 1 26 ASP 26 185 185 ASP ASP A . n A 1 27 ILE 27 186 186 ILE ILE A . n A 1 28 ALA 28 187 187 ALA ALA A . n A 1 29 ILE 29 188 188 ILE ILE A . n A 1 30 GLU 30 189 189 GLU GLU A . n A 1 31 CYS 31 190 190 CYS CYS A . n A 1 32 LEU 32 191 191 LEU LEU A . n A 1 33 GLU 33 192 192 GLU GLU A . n A 1 34 LYS 34 193 193 LYS LYS A . n A 1 35 GLU 35 194 194 GLU GLU A . n A 1 36 SER 36 195 195 SER SER A . n A 1 37 GLY 37 196 196 GLY GLY A . n A 1 38 LEU 38 197 197 LEU LEU A . n A 1 39 GLN 39 198 198 GLN GLN A . n A 1 40 GLN 40 199 199 GLN GLN A . n A 1 41 LEU 41 200 200 LEU LEU A . n A 1 42 VAL 42 201 201 VAL VAL A . n A 1 43 PRO 43 202 202 PRO PRO A . n A 1 44 TYR 44 203 203 TYR TYR A . n A 1 45 PHE 45 204 204 PHE PHE A . n A 1 46 ILE 46 205 205 ILE ILE A . n A 1 47 GLN 47 206 206 GLN GLN A . n A 1 48 HIS 48 207 207 HIS HIS A . n A 1 49 ILE 49 208 208 ILE ILE A . n A 1 50 SER 50 209 209 SER SER A . n A 1 51 GLU 51 210 210 GLU GLU A . n A 1 52 LEU 52 211 211 LEU LEU A . n A 1 53 ILE 53 212 212 ILE ILE A . n A 1 54 LEU 54 213 213 LEU LEU A . n A 1 55 LYS 55 214 214 LYS LYS A . n A 1 56 SER 56 215 215 SER SER A . n A 1 57 PHE 57 216 216 PHE PHE A . n A 1 58 LYS 58 217 217 LYS LYS A . n A 1 59 GLU 59 218 218 GLU GLU A . n A 1 60 ALA 60 219 219 ALA ALA A . n A 1 61 GLU 61 220 220 GLU GLU A . n A 1 62 VAL 62 221 221 VAL VAL A . n A 1 63 LEU 63 222 222 LEU LEU A . n A 1 64 LYS 64 223 223 LYS LYS A . n A 1 65 THR 65 224 224 THR THR A . n A 1 66 CYS 66 225 225 CYS CYS A . n A 1 67 ILE 67 226 226 ILE ILE A . n A 1 68 ALA 68 227 227 ALA ALA A . n A 1 69 LEU 69 228 228 LEU LEU A . n A 1 70 TYR 70 229 229 TYR TYR A . n A 1 71 PHE 71 230 230 PHE PHE A . n A 1 72 SER 72 231 231 SER SER A . n A 1 73 LEU 73 232 232 LEU LEU A . n A 1 74 ILE 74 233 233 ILE ILE A . n A 1 75 LYS 75 234 234 LYS LYS A . n A 1 76 ASN 76 235 235 ASN ASN A . n A 1 77 LYS 77 236 236 LYS LYS A . n A 1 78 HIS 78 237 237 HIS HIS A . n A 1 79 VAL 79 238 238 VAL VAL A . n A 1 80 PHE 80 239 239 PHE PHE A . n A 1 81 ILE 81 240 240 ILE ILE A . n A 1 82 ASP 82 241 241 ASP ASP A . n A 1 83 PRO 83 242 242 PRO PRO A . n A 1 84 TYR 84 243 243 TYR TYR A . n A 1 85 LEU 85 244 244 LEU LEU A . n A 1 86 HIS 86 245 245 HIS HIS A . n A 1 87 GLN 87 246 246 GLN GLN A . n A 1 88 ILE 88 247 247 ILE ILE A . n A 1 89 LEU 89 248 248 LEU LEU A . n A 1 90 PRO 90 249 249 PRO PRO A . n A 1 91 SER 91 250 250 SER SER A . n A 1 92 LEU 92 251 251 LEU LEU A . n A 1 93 LEU 93 252 252 LEU LEU A . n A 1 94 THR 94 253 253 THR THR A . n A 1 95 CYS 95 254 254 CYS CYS A . n A 1 96 VAL 96 255 255 VAL VAL A . n A 1 97 ILE 97 256 256 ILE ILE A . n A 1 98 GLY 98 257 257 GLY GLY A . n A 1 99 LYS 99 258 258 LYS LYS A . n A 1 100 SER 100 259 259 SER SER A . n A 1 101 ILE 101 260 260 ILE ILE A . n A 1 102 VAL 102 261 261 VAL VAL A . n A 1 103 ASP 103 262 262 ASP ASP A . n A 1 104 ASP 104 263 263 ASP ASP A . n A 1 105 ASP 105 264 264 ASP ASP A . n A 1 106 VAL 106 265 265 VAL VAL A . n A 1 107 ARG 107 266 266 ARG ARG A . n A 1 108 LYS 108 267 267 LYS LYS A . n A 1 109 MET 109 268 268 MET MET A . n A 1 110 SER 110 269 269 SER SER A . n A 1 111 ALA 111 270 270 ALA ALA A . n A 1 112 ASP 112 271 271 ASP ASP A . n A 1 113 ILE 113 272 272 ILE ILE A . n A 1 114 VAL 114 273 273 VAL VAL A . n A 1 115 LYS 115 274 274 LYS LYS A . n A 1 116 TYR 116 275 275 TYR TYR A . n A 1 117 ILE 117 276 276 ILE ILE A . n A 1 118 TYR 118 277 277 TYR TYR A . n A 1 119 ASP 119 278 278 ASP ASP A . n A 1 120 THR 120 279 279 THR THR A . n A 1 121 TYR 121 280 280 TYR TYR A . n A 1 122 SER 122 281 281 SER SER A . n A 1 123 ARG 123 282 282 ARG ARG A . n A 1 124 SER 124 283 283 SER SER A . n A 1 125 TYR 125 284 284 TYR TYR A . n A 1 126 LYS 126 285 285 LYS LYS A . n A 1 127 THR 127 286 286 THR THR A . n A 1 128 LEU 128 287 287 LEU LEU A . n A 1 129 ALA 129 288 288 ALA ALA A . n A 1 130 PRO 130 289 289 PRO PRO A . n A 1 131 ARG 131 290 290 ARG ARG A . n A 1 132 VAL 132 291 291 VAL VAL A . n A 1 133 LEU 133 292 292 LEU LEU A . n A 1 134 LYS 134 293 293 LYS LYS A . n A 1 135 THR 135 294 294 THR THR A . n A 1 136 LEU 136 295 295 LEU LEU A . n A 1 137 LYS 137 296 296 LYS LYS A . n A 1 138 GLY 138 297 297 GLY GLY A . n A 1 139 VAL 139 298 298 VAL VAL A . n A 1 140 TRP 140 299 299 TRP TRP A . n A 1 141 MET 141 300 300 MET MET A . n A 1 142 ASP 142 301 301 ASP ASP A . n A 1 143 PRO 143 302 302 PRO PRO A . n A 1 144 ASN 144 303 303 ASN ASN A . n A 1 145 ARG 145 304 304 ARG ARG A . n A 1 146 SER 146 305 305 SER SER A . n A 1 147 GLU 147 306 306 GLU GLU A . n A 1 148 ASP 148 307 307 ASP ASP A . n A 1 149 SER 149 308 308 SER SER A . n A 1 150 GLN 150 309 309 GLN GLN A . n A 1 151 TYR 151 310 310 TYR TYR A . n A 1 152 GLY 152 311 311 GLY GLY A . n A 1 153 ALA 153 312 312 ALA ALA A . n A 1 154 LEU 154 313 313 LEU LEU A . n A 1 155 TYR 155 314 314 TYR TYR A . n A 1 156 CYS 156 315 315 CYS CYS A . n A 1 157 LEU 157 316 316 LEU LEU A . n A 1 158 SER 158 317 317 SER SER A . n A 1 159 ILE 159 318 318 ILE ILE A . n A 1 160 LEU 160 319 319 LEU LEU A . n A 1 161 SER 161 320 320 SER SER A . n A 1 162 LYS 162 321 321 LYS LYS A . n A 1 163 ASN 163 322 322 ASN ASN A . n A 1 164 VAL 164 323 323 VAL VAL A . n A 1 165 VAL 165 324 324 VAL VAL A . n A 1 166 ASN 166 325 325 ASN ASN A . n A 1 167 THR 167 326 326 THR THR A . n A 1 168 VAL 168 327 327 VAL VAL A . n A 1 169 ILE 169 328 328 ILE ILE A . n A 1 170 ARG 170 329 329 ARG ARG A . n A 1 171 GLU 171 330 330 GLU GLU A . n A 1 172 HIS 172 331 331 HIS HIS A . n A 1 173 ALA 173 332 332 ALA ALA A . n A 1 174 GLU 174 333 333 GLU GLU A . n A 1 175 GLU 175 334 334 GLU GLU A . n A 1 176 TYR 176 335 335 TYR TYR A . n A 1 177 LYS 177 336 336 LYS LYS A . n A 1 178 ARG 178 337 337 ARG ARG A . n A 1 179 THR 179 338 338 THR THR A . n A 1 180 ILE 180 339 339 ILE ILE A . n A 1 181 GLY 181 340 340 GLY GLY A . n A 1 182 LYS 182 341 341 LYS LYS A . n A 1 183 LYS 183 342 342 LYS LYS A . n A 1 184 LYS 184 343 343 LYS LYS A . n A 1 185 VAL 185 344 344 VAL VAL A . n A 1 186 THR 186 345 345 THR THR A . n A 1 187 ASN 187 346 346 ASN ASN A . n A 1 188 LEU 188 347 347 LEU LEU A . n A 1 189 LEU 189 348 348 LEU LEU A . n A 1 190 ASP 190 349 349 ASP ASP A . n A 1 191 ASN 191 350 350 ASN ASN A . n A 1 192 VAL 192 351 351 VAL VAL A . n A 1 193 LEU 193 352 352 LEU LEU A . n A 1 194 ASN 194 353 353 ASN ASN A . n A 1 195 VAL 195 354 354 VAL VAL A . n A 1 196 HIS 196 355 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NHE 1 400 400 NHE NHE A . C 2 NHE 1 401 401 NHE NHE A . D 3 HOH 1 2001 2001 HOH HOH A . D 3 HOH 2 2002 2002 HOH HOH A . D 3 HOH 3 2003 2003 HOH HOH A . D 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 5 2005 2005 HOH HOH A . D 3 HOH 6 2006 2006 HOH HOH A . D 3 HOH 7 2007 2007 HOH HOH A . D 3 HOH 8 2008 2008 HOH HOH A . D 3 HOH 9 2009 2009 HOH HOH A . D 3 HOH 10 2010 2010 HOH HOH A . D 3 HOH 11 2011 2011 HOH HOH A . D 3 HOH 12 2012 2012 HOH HOH A . D 3 HOH 13 2013 2013 HOH HOH A . D 3 HOH 14 2014 2014 HOH HOH A . D 3 HOH 15 2015 2015 HOH HOH A . D 3 HOH 16 2016 2016 HOH HOH A . D 3 HOH 17 2017 2017 HOH HOH A . D 3 HOH 18 2018 2018 HOH HOH A . D 3 HOH 19 2019 2019 HOH HOH A . D 3 HOH 20 2020 2020 HOH HOH A . D 3 HOH 21 2021 2021 HOH HOH A . D 3 HOH 22 2022 2022 HOH HOH A . D 3 HOH 23 2023 2023 HOH HOH A . D 3 HOH 24 2024 2024 HOH HOH A . D 3 HOH 25 2025 2025 HOH HOH A . D 3 HOH 26 2026 2026 HOH HOH A . D 3 HOH 27 2027 2027 HOH HOH A . D 3 HOH 28 2028 2028 HOH HOH A . D 3 HOH 29 2029 2029 HOH HOH A . D 3 HOH 30 2030 2030 HOH HOH A . D 3 HOH 31 2031 2031 HOH HOH A . D 3 HOH 32 2032 2032 HOH HOH A . D 3 HOH 33 2033 2033 HOH HOH A . D 3 HOH 34 2034 2034 HOH HOH A . D 3 HOH 35 2035 2035 HOH HOH A . D 3 HOH 36 2036 2036 HOH HOH A . D 3 HOH 37 2037 2037 HOH HOH A . D 3 HOH 38 2038 2038 HOH HOH A . D 3 HOH 39 2039 2039 HOH HOH A . D 3 HOH 40 2040 2040 HOH HOH A . D 3 HOH 41 2041 2041 HOH HOH A . D 3 HOH 42 2042 2042 HOH HOH A . D 3 HOH 43 2043 2043 HOH HOH A . D 3 HOH 44 2044 2044 HOH HOH A . D 3 HOH 45 2045 2045 HOH HOH A . D 3 HOH 46 2046 2046 HOH HOH A . D 3 HOH 47 2047 2047 HOH HOH A . D 3 HOH 48 2048 2048 HOH HOH A . D 3 HOH 49 2049 2049 HOH HOH A . D 3 HOH 50 2050 2050 HOH HOH A . D 3 HOH 51 2051 2051 HOH HOH A . D 3 HOH 52 2052 2052 HOH HOH A . D 3 HOH 53 2053 2053 HOH HOH A . D 3 HOH 54 2054 2054 HOH HOH A . D 3 HOH 55 2055 2055 HOH HOH A . D 3 HOH 56 2056 2056 HOH HOH A . D 3 HOH 57 2057 2057 HOH HOH A . D 3 HOH 58 2058 2058 HOH HOH A . D 3 HOH 59 2059 2059 HOH HOH A . D 3 HOH 60 2060 2060 HOH HOH A . D 3 HOH 61 2061 2061 HOH HOH A . D 3 HOH 62 2062 2062 HOH HOH A . D 3 HOH 63 2063 2063 HOH HOH A . D 3 HOH 64 2064 2064 HOH HOH A . D 3 HOH 65 2065 2065 HOH HOH A . D 3 HOH 66 2066 2066 HOH HOH A . D 3 HOH 67 2067 2067 HOH HOH A . D 3 HOH 68 2068 2068 HOH HOH A . D 3 HOH 69 2069 2069 HOH HOH A . D 3 HOH 70 2070 2070 HOH HOH A . D 3 HOH 71 2071 2071 HOH HOH A . D 3 HOH 72 2072 2072 HOH HOH A . D 3 HOH 73 2073 2073 HOH HOH A . D 3 HOH 74 2074 2074 HOH HOH A . D 3 HOH 75 2075 2075 HOH HOH A . D 3 HOH 76 2076 2076 HOH HOH A . D 3 HOH 77 2077 2077 HOH HOH A . D 3 HOH 78 2078 2078 HOH HOH A . D 3 HOH 79 2079 2079 HOH HOH A . D 3 HOH 80 2080 2080 HOH HOH A . D 3 HOH 81 2081 2081 HOH HOH A . D 3 HOH 82 2082 2082 HOH HOH A . D 3 HOH 83 2083 2083 HOH HOH A . D 3 HOH 84 2084 2084 HOH HOH A . D 3 HOH 85 2085 2085 HOH HOH A . D 3 HOH 86 2086 2086 HOH HOH A . D 3 HOH 87 2087 2087 HOH HOH A . D 3 HOH 88 2088 2088 HOH HOH A . D 3 HOH 89 2089 2089 HOH HOH A . D 3 HOH 90 2090 2090 HOH HOH A . D 3 HOH 91 2091 2091 HOH HOH A . D 3 HOH 92 2092 2092 HOH HOH A . D 3 HOH 93 2093 2093 HOH HOH A . D 3 HOH 94 2094 2094 HOH HOH A . D 3 HOH 95 2095 2095 HOH HOH A . D 3 HOH 96 2096 2096 HOH HOH A . D 3 HOH 97 2097 2097 HOH HOH A . D 3 HOH 98 2098 2098 HOH HOH A . D 3 HOH 99 2099 2099 HOH HOH A . D 3 HOH 100 2100 2100 HOH HOH A . D 3 HOH 101 2101 2101 HOH HOH A . D 3 HOH 102 2102 2102 HOH HOH A . D 3 HOH 103 2103 2103 HOH HOH A . D 3 HOH 104 2104 2104 HOH HOH A . D 3 HOH 105 2105 2105 HOH HOH A . D 3 HOH 106 2106 2106 HOH HOH A . D 3 HOH 107 2107 2107 HOH HOH A . D 3 HOH 108 2108 2108 HOH HOH A . D 3 HOH 109 2109 2109 HOH HOH A . D 3 HOH 110 2110 2110 HOH HOH A . D 3 HOH 111 2111 2111 HOH HOH A . D 3 HOH 112 2112 2112 HOH HOH A . D 3 HOH 113 2113 2113 HOH HOH A . D 3 HOH 114 2114 2114 HOH HOH A . D 3 HOH 115 2115 2115 HOH HOH A . D 3 HOH 116 2116 2116 HOH HOH A . D 3 HOH 117 2117 2117 HOH HOH A . D 3 HOH 118 2118 2118 HOH HOH A . D 3 HOH 119 2119 2119 HOH HOH A . D 3 HOH 120 2120 2120 HOH HOH A . D 3 HOH 121 2121 2121 HOH HOH A . D 3 HOH 122 2122 2122 HOH HOH A . D 3 HOH 123 2123 2123 HOH HOH A . D 3 HOH 124 2124 2124 HOH HOH A . D 3 HOH 125 2125 2125 HOH HOH A . D 3 HOH 126 2126 2126 HOH HOH A . D 3 HOH 127 2127 2127 HOH HOH A . D 3 HOH 128 2128 2128 HOH HOH A . D 3 HOH 129 2129 2129 HOH HOH A . D 3 HOH 130 2130 2130 HOH HOH A . D 3 HOH 131 2131 2131 HOH HOH A . D 3 HOH 132 2132 2132 HOH HOH A . D 3 HOH 133 2133 2133 HOH HOH A . D 3 HOH 134 2134 2134 HOH HOH A . D 3 HOH 135 2135 2135 HOH HOH A . D 3 HOH 136 2136 2136 HOH HOH A . D 3 HOH 137 2137 2137 HOH HOH A . D 3 HOH 138 2138 2138 HOH HOH A . D 3 HOH 139 2139 2139 HOH HOH A . D 3 HOH 140 2140 2140 HOH HOH A . D 3 HOH 141 2141 2141 HOH HOH A . D 3 HOH 142 2142 2142 HOH HOH A . D 3 HOH 143 2143 2143 HOH HOH A . D 3 HOH 144 2144 2144 HOH HOH A . D 3 HOH 145 2145 2145 HOH HOH A . D 3 HOH 146 2146 2146 HOH HOH A . D 3 HOH 147 2147 2147 HOH HOH A . D 3 HOH 148 2148 2148 HOH HOH A . D 3 HOH 149 2149 2149 HOH HOH A . D 3 HOH 150 2150 2150 HOH HOH A . D 3 HOH 151 2151 2151 HOH HOH A . D 3 HOH 152 2152 2152 HOH HOH A . D 3 HOH 153 2153 2153 HOH HOH A . D 3 HOH 154 2154 2154 HOH HOH A . D 3 HOH 155 2155 2155 HOH HOH A . D 3 HOH 156 2156 2156 HOH HOH A . D 3 HOH 157 2157 2157 HOH HOH A . D 3 HOH 158 2158 2158 HOH HOH A . D 3 HOH 159 2159 2159 HOH HOH A . D 3 HOH 160 2160 2160 HOH HOH A . D 3 HOH 161 2161 2161 HOH HOH A . D 3 HOH 162 2162 2162 HOH HOH A . D 3 HOH 163 2163 2163 HOH HOH A . D 3 HOH 164 2164 2164 HOH HOH A . D 3 HOH 165 2165 2165 HOH HOH A . D 3 HOH 166 2166 2166 HOH HOH A . D 3 HOH 167 2167 2167 HOH HOH A . D 3 HOH 168 2168 2168 HOH HOH A . D 3 HOH 169 2169 2169 HOH HOH A . D 3 HOH 170 2170 2170 HOH HOH A . D 3 HOH 171 2171 2171 HOH HOH A . D 3 HOH 172 2172 2172 HOH HOH A . D 3 HOH 173 2173 2173 HOH HOH A . D 3 HOH 174 2174 2174 HOH HOH A . D 3 HOH 175 2175 2175 HOH HOH A . D 3 HOH 176 2176 2176 HOH HOH A . D 3 HOH 177 2177 2177 HOH HOH A . D 3 HOH 178 2178 2178 HOH HOH A . D 3 HOH 179 2179 2179 HOH HOH A . D 3 HOH 180 2180 2180 HOH HOH A . D 3 HOH 181 2181 2181 HOH HOH A . D 3 HOH 182 2182 2182 HOH HOH A . D 3 HOH 183 2183 2183 HOH HOH A . D 3 HOH 184 2184 2184 HOH HOH A . D 3 HOH 185 2185 2185 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-20 2 'Structure model' 1 1 2012-07-25 3 'Structure model' 1 2 2012-08-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Structure summary' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 25.9766 _pdbx_refine_tls.origin_y 40.0697 _pdbx_refine_tls.origin_z 15.9232 _pdbx_refine_tls.T[1][1] -0.0846 _pdbx_refine_tls.T[2][2] -0.0140 _pdbx_refine_tls.T[3][3] -0.0764 _pdbx_refine_tls.T[1][2] 0.0216 _pdbx_refine_tls.T[1][3] 0.0128 _pdbx_refine_tls.T[2][3] 0.0028 _pdbx_refine_tls.L[1][1] 2.0326 _pdbx_refine_tls.L[2][2] 0.9907 _pdbx_refine_tls.L[3][3] 1.3196 _pdbx_refine_tls.L[1][2] 0.1404 _pdbx_refine_tls.L[1][3] 0.6099 _pdbx_refine_tls.L[2][3] 0.7462 _pdbx_refine_tls.S[1][1] -0.0572 _pdbx_refine_tls.S[1][2] -0.4045 _pdbx_refine_tls.S[1][3] -0.0068 _pdbx_refine_tls.S[2][1] 0.0516 _pdbx_refine_tls.S[2][2] 0.0582 _pdbx_refine_tls.S[2][3] 0.0080 _pdbx_refine_tls.S[3][1] 0.0442 _pdbx_refine_tls.S[3][2] 0.0370 _pdbx_refine_tls.S[3][3] -0.0010 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details 'CHAIN A' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BUSTER refinement 2.10.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SHARP phasing . ? 4 # _pdbx_entry_details.entry_id 4ATG _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;NOT IN DATABASES GLY 160 AND SER 161 THROMBIN CLEAVAGE SITE. HIS 162 AND MET 163 ENGINEERED NDE1 CLONING SITE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 180 ? ? -100.08 66.31 2 1 THR A 326 ? ? -81.20 -79.96 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id HIS _pdbx_unobs_or_zero_occ_residues.auth_seq_id 355 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id HIS _pdbx_unobs_or_zero_occ_residues.label_seq_id 196 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' NHE 3 water HOH #