HEADER DNA BINDING PROTEIN 08-MAY-12 4ATH TITLE MITF APO STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: DNA-BINDING DOMAIN, RESIDUES 217-296; COMPND 5 SYNONYM: MITF; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS DNA BINDING PROTEIN, TRANSCRIPTION FACTOR, MELANOMA EXPDTA X-RAY DIFFRACTION AUTHOR V.POGENBERG,M.MILEWSKI,M.WILMANNS REVDAT 3 17-JUL-19 4ATH 1 REMARK LINK REVDAT 2 19-DEC-12 4ATH 1 JRNL REVDAT 1 12-DEC-12 4ATH 0 JRNL AUTH V.POGENBERG,M.HOGMUNDSDOTTIR,K.BERGSTEINSDOTTIR,A.SCHEPSKY, JRNL AUTH 2 B.PHUNG,V.DEINEKO,M.MILEWSKI,E.STEINGRIMSSON,M.WILMANNS JRNL TITL RESTRICTED LEUCINE ZIPPER DIMERIZATION AND SPECIFICITY OF JRNL TITL 2 DNA RECOGNITION OF THE MELANOCYTE MASTER REGULATOR MITF JRNL REF GENES DEV. V. 26 2647 2012 JRNL REFN ISSN 0890-9369 JRNL PMID 23207919 JRNL DOI 10.1101/GAD.198192.112 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 13993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 733 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 887 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2950 REMARK 3 BIN FREE R VALUE SET COUNT : 54 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1329 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 153 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.55000 REMARK 3 B33 (A**2) : 2.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.177 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.492 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1443 ; 0.011 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1942 ; 1.148 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 175 ; 4.258 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;32.861 ;23.210 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 298 ;14.758 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;14.156 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 201 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 837 ; 0.586 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1346 ; 1.089 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 606 ; 2.033 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 591 ; 3.316 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 216 A 229 REMARK 3 ORIGIN FOR THE GROUP (A): 50.1701 33.2246 -24.9490 REMARK 3 T TENSOR REMARK 3 T11: 0.3471 T22: 0.3459 REMARK 3 T33: 0.2167 T12: 0.0780 REMARK 3 T13: 0.0398 T23: 0.0477 REMARK 3 L TENSOR REMARK 3 L11: 4.6400 L22: 0.9923 REMARK 3 L33: 1.3982 L12: -0.4839 REMARK 3 L13: -0.6923 L23: 0.7206 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: 0.7093 S13: -0.3807 REMARK 3 S21: -0.1749 S22: -0.0393 S23: -0.1522 REMARK 3 S31: 0.3491 S32: 0.2200 S33: 0.0465 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 230 A 242 REMARK 3 ORIGIN FOR THE GROUP (A): 47.2862 48.7783 -24.6934 REMARK 3 T TENSOR REMARK 3 T11: 0.3400 T22: 0.4574 REMARK 3 T33: 0.5504 T12: -0.0204 REMARK 3 T13: 0.0107 T23: 0.2167 REMARK 3 L TENSOR REMARK 3 L11: 1.9689 L22: 0.1108 REMARK 3 L33: 0.3057 L12: -0.1198 REMARK 3 L13: -0.4138 L23: 0.0750 REMARK 3 S TENSOR REMARK 3 S11: 0.1271 S12: 0.5923 S13: 0.9494 REMARK 3 S21: -0.1329 S22: 0.0243 S23: -0.1078 REMARK 3 S31: -0.2270 S32: 0.0420 S33: -0.1514 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 243 A 259 REMARK 3 ORIGIN FOR THE GROUP (A): 45.2965 43.4263 -13.9358 REMARK 3 T TENSOR REMARK 3 T11: 0.1310 T22: 0.1355 REMARK 3 T33: 0.2119 T12: 0.0270 REMARK 3 T13: -0.0191 T23: 0.0454 REMARK 3 L TENSOR REMARK 3 L11: 5.4925 L22: 2.4270 REMARK 3 L33: 3.2741 L12: 0.2291 REMARK 3 L13: -1.2043 L23: -0.3032 REMARK 3 S TENSOR REMARK 3 S11: 0.0972 S12: 0.0821 S13: 0.5601 REMARK 3 S21: -0.1376 S22: 0.0314 S23: -0.0928 REMARK 3 S31: -0.1178 S32: 0.1556 S33: -0.1286 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 260 A 271 REMARK 3 ORIGIN FOR THE GROUP (A): 26.7647 41.2781 -3.8945 REMARK 3 T TENSOR REMARK 3 T11: 0.1969 T22: 0.1777 REMARK 3 T33: 0.2375 T12: 0.0335 REMARK 3 T13: 0.0051 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 10.0675 L22: 0.2449 REMARK 3 L33: 1.0066 L12: 0.7956 REMARK 3 L13: -2.1143 L23: 0.0668 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: -0.3123 S13: 0.4732 REMARK 3 S21: 0.0583 S22: 0.0369 S23: 0.1034 REMARK 3 S31: -0.1139 S32: 0.0395 S33: -0.0401 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 272 A 295 REMARK 3 ORIGIN FOR THE GROUP (A): 1.8590 36.0514 0.1379 REMARK 3 T TENSOR REMARK 3 T11: 0.1524 T22: 0.0613 REMARK 3 T33: 0.1652 T12: 0.0024 REMARK 3 T13: 0.0150 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 8.8826 L22: 1.7892 REMARK 3 L33: 1.9361 L12: 0.2839 REMARK 3 L13: -0.1918 L23: -0.0681 REMARK 3 S TENSOR REMARK 3 S11: -0.0940 S12: -0.3420 S13: 0.0017 REMARK 3 S21: 0.0444 S22: 0.0227 S23: 0.0300 REMARK 3 S31: 0.0870 S32: 0.0553 S33: 0.0713 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 214 B 225 REMARK 3 ORIGIN FOR THE GROUP (A): 59.8504 38.6369 -15.3389 REMARK 3 T TENSOR REMARK 3 T11: 0.3078 T22: 0.2450 REMARK 3 T33: 0.4214 T12: -0.0209 REMARK 3 T13: 0.1255 T23: -0.0495 REMARK 3 L TENSOR REMARK 3 L11: 5.8482 L22: 2.3700 REMARK 3 L33: 2.3575 L12: 1.5302 REMARK 3 L13: -0.6029 L23: -1.1700 REMARK 3 S TENSOR REMARK 3 S11: 0.0682 S12: 0.4492 S13: 0.4762 REMARK 3 S21: -0.3848 S22: -0.0396 S23: -0.5904 REMARK 3 S31: -0.1484 S32: 0.5979 S33: -0.0286 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 226 B 259 REMARK 3 ORIGIN FOR THE GROUP (A): 45.1127 30.3138 -12.9380 REMARK 3 T TENSOR REMARK 3 T11: 0.1509 T22: 0.1185 REMARK 3 T33: 0.1197 T12: 0.0032 REMARK 3 T13: -0.0041 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 2.4441 L22: 1.3553 REMARK 3 L33: 1.2516 L12: -0.5246 REMARK 3 L13: -0.1163 L23: 0.0825 REMARK 3 S TENSOR REMARK 3 S11: 0.0596 S12: 0.1558 S13: -0.1653 REMARK 3 S21: -0.0891 S22: -0.0129 S23: 0.0505 REMARK 3 S31: 0.1487 S32: 0.0466 S33: -0.0466 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 260 B 276 REMARK 3 ORIGIN FOR THE GROUP (A): 20.1569 42.2475 -11.5684 REMARK 3 T TENSOR REMARK 3 T11: 0.2190 T22: 0.1742 REMARK 3 T33: 0.1857 T12: 0.0135 REMARK 3 T13: 0.0016 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 7.8874 L22: 0.8713 REMARK 3 L33: 0.8513 L12: -2.5071 REMARK 3 L13: -2.4269 L23: 0.7661 REMARK 3 S TENSOR REMARK 3 S11: 0.1316 S12: 0.4329 S13: 0.0532 REMARK 3 S21: -0.1462 S22: -0.0988 S23: -0.0657 REMARK 3 S31: 0.0396 S32: -0.0258 S33: -0.0329 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 277 B 295 REMARK 3 ORIGIN FOR THE GROUP (A): -3.1843 45.7137 0.8487 REMARK 3 T TENSOR REMARK 3 T11: 0.1282 T22: 0.0245 REMARK 3 T33: 0.1261 T12: -0.0101 REMARK 3 T13: -0.0266 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 8.5505 L22: 3.6963 REMARK 3 L33: 4.5769 L12: -1.0890 REMARK 3 L13: -2.0746 L23: 0.6280 REMARK 3 S TENSOR REMARK 3 S11: -0.0013 S12: -0.2331 S13: 0.1390 REMARK 3 S21: 0.2160 S22: 0.0210 S23: 0.2695 REMARK 3 S31: -0.0067 S32: -0.2062 S33: -0.0197 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4ATH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1290050725. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.965 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MULTILAYER MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH SX-165 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14742 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTO-RICKSHAW REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULFATE AND 150 MM REMARK 280 SODIUM ACETATE (PH 5.0) REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.94550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 214 REMARK 465 ALA A 215 REMARK 465 GLY A 296 REMARK 465 GLY B 296 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MSE A 216 CB CG SE CE REMARK 470 ARG A 217 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 218 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 240 CD NE CZ NH1 NH2 REMARK 470 HIS A 295 ND1 CD2 CE1 NE2 REMARK 470 MSE B 216 CG SE CE REMARK 470 LYS B 272 CD CE NZ REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1296 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1296 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1297 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1299 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ATI RELATED DB: PDB REMARK 900 MITF:M-BOX COMPLEX REMARK 900 RELATED ID: 4ATK RELATED DB: PDB REMARK 900 MITF:E-BOX COMPLEX REMARK 999 REMARK 999 SEQUENCE REMARK 999 ISOFORM A2 SEQUENCE DBREF 4ATH A 217 296 UNP Q08874 MITF_MOUSE 217 296 DBREF 4ATH B 217 296 UNP Q08874 MITF_MOUSE 217 296 SEQADV 4ATH GLY A 214 UNP Q08874 EXPRESSION TAG SEQADV 4ATH ALA A 215 UNP Q08874 EXPRESSION TAG SEQADV 4ATH MSE A 216 UNP Q08874 EXPRESSION TAG SEQADV 4ATH GLY B 214 UNP Q08874 EXPRESSION TAG SEQADV 4ATH ALA B 215 UNP Q08874 EXPRESSION TAG SEQADV 4ATH MSE B 216 UNP Q08874 EXPRESSION TAG SEQRES 1 A 83 GLY ALA MSE ARG PHE ASN ILE ASN ASP ARG ILE LYS GLU SEQRES 2 A 83 LEU GLY THR LEU ILE PRO LYS SER ASN ASP PRO ASP MSE SEQRES 3 A 83 ARG TRP ASN LYS GLY THR ILE LEU LYS ALA SER VAL ASP SEQRES 4 A 83 TYR ILE ARG LYS LEU GLN ARG GLU GLN GLN ARG ALA LYS SEQRES 5 A 83 ASP LEU GLU ASN ARG GLN LYS LYS LEU GLU HIS ALA ASN SEQRES 6 A 83 ARG HIS LEU LEU LEU ARG VAL GLN GLU LEU GLU MSE GLN SEQRES 7 A 83 ALA ARG ALA HIS GLY SEQRES 1 B 83 GLY ALA MSE ARG PHE ASN ILE ASN ASP ARG ILE LYS GLU SEQRES 2 B 83 LEU GLY THR LEU ILE PRO LYS SER ASN ASP PRO ASP MSE SEQRES 3 B 83 ARG TRP ASN LYS GLY THR ILE LEU LYS ALA SER VAL ASP SEQRES 4 B 83 TYR ILE ARG LYS LEU GLN ARG GLU GLN GLN ARG ALA LYS SEQRES 5 B 83 ASP LEU GLU ASN ARG GLN LYS LYS LEU GLU HIS ALA ASN SEQRES 6 B 83 ARG HIS LEU LEU LEU ARG VAL GLN GLU LEU GLU MSE GLN SEQRES 7 B 83 ALA ARG ALA HIS GLY MODRES 4ATH MSE A 216 MET SELENOMETHIONINE MODRES 4ATH MSE A 239 MET SELENOMETHIONINE MODRES 4ATH MSE A 290 MET SELENOMETHIONINE MODRES 4ATH MSE B 216 MET SELENOMETHIONINE MODRES 4ATH MSE B 239 MET SELENOMETHIONINE MODRES 4ATH MSE B 290 MET SELENOMETHIONINE HET MSE A 216 4 HET MSE A 239 8 HET MSE A 290 8 HET MSE B 216 5 HET MSE B 239 8 HET MSE B 290 13 HET SO4 A1296 5 HET SO4 B1296 5 HET SO4 B1297 5 HET SO4 B1298 5 HET SO4 B1299 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 HOH *153(H2 O) HELIX 1 1 MSE A 216 ILE A 231 1 16 HELIX 2 2 ASN A 242 GLU A 260 1 19 HELIX 3 3 GLU A 260 HIS A 295 1 36 HELIX 4 4 GLY B 214 ILE B 231 1 18 HELIX 5 5 ASN B 242 HIS B 295 1 54 LINK C MSE A 216 N ARG A 217 1555 1555 1.33 LINK N MSE A 239 C ASP A 238 1555 1555 1.33 LINK C MSE A 239 N ARG A 240 1555 1555 1.33 LINK N MSE A 290 C GLU A 289 1555 1555 1.33 LINK C MSE A 290 N GLN A 291 1555 1555 1.33 LINK C MSE B 216 N ARG B 217 1555 1555 1.34 LINK N MSE B 216 C ALA B 215 1555 1555 1.34 LINK C MSE B 239 N ARG B 240 1555 1555 1.33 LINK N MSE B 239 C ASP B 238 1555 1555 1.33 LINK C MSE B 290 N GLN B 291 1555 1555 1.33 LINK N MSE B 290 C GLU B 289 1555 1555 1.34 SITE 1 AC1 5 HIS A 276 ARG A 279 HIS A 280 HOH A2049 SITE 2 AC1 5 HOH A2069 SITE 1 AC2 6 MSE A 290 ARG A 293 HOH A2058 PRO B 232 SITE 2 AC2 6 LYS B 233 SER B 234 SITE 1 AC3 3 ASN B 242 LYS B 243 HOH B2027 SITE 1 AC4 4 LYS B 256 ARG B 259 GLU B 260 ARG B 263 SITE 1 AC5 2 HIS B 276 ARG B 279 CRYST1 53.375 39.891 55.160 90.00 117.28 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018735 0.000000 0.009662 0.00000 SCALE2 0.000000 0.025068 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020398 0.00000 HETATM 1 N MSE A 216 56.981 24.683 -25.399 1.00 61.74 N ANISOU 1 N MSE A 216 8060 7508 7890 1758 727 -537 N HETATM 2 CA MSE A 216 57.271 25.395 -24.120 1.00 59.90 C ANISOU 2 CA MSE A 216 7868 7250 7641 1772 665 -241 C HETATM 3 C MSE A 216 57.288 26.907 -24.315 1.00 57.94 C ANISOU 3 C MSE A 216 7579 7277 7156 1662 635 -123 C HETATM 4 O MSE A 216 56.492 27.628 -23.702 1.00 56.40 O ANISOU 4 O MSE A 216 7450 7066 6910 1557 585 35 O