HEADER PLANT PROTEIN 14-JUN-12 4AXR TITLE CRYSTAL STRUCTURE OF THAUMATIN FROM A AUTO-HARVESTED CRYSTAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: THAUMATIN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: THAUMATIN I SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THAUMATOCOCCUS DANIELLII; SOURCE 3 ORGANISM_COMMON: KATEMFE; SOURCE 4 ORGANISM_TAXID: 4621 KEYWDS PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.CIPRIANI,M.ROWER,C.LANDRET,U.ZANDER,F.FELISAZ,J.A.MARQUEZ REVDAT 1 24-OCT-12 4AXR 0 JRNL AUTH F.CIPRIANI,M.ROWER,C.LANDRET,U.ZANDER,F.FELISAZ,J.A.MARQUEZ JRNL TITL CRYSTAL DIRECT: A NEW METHOD FOR AUTOMATED CRYSTAL JRNL TITL 2 HARVESTING BASED ON LASER-INDUCED PHOTOABLATION OF THIN JRNL TITL 3 FILMS JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 68 1393 2012 JRNL REFN ISSN 0907-4449 JRNL PMID 22993093 JRNL DOI 10.1107/S0907444912031459 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0116 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 86.04 REMARK 3 NUMBER OF REFLECTIONS : 43835 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.13604 REMARK 3 R VALUE (WORKING SET) : 0.13443 REMARK 3 FREE R VALUE : 0.16565 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 2333 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.381 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.416 REMARK 3 REFLECTION IN BIN (WORKING SET) : 607 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 16.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.238 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1603 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 275 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.844 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02 REMARK 3 B22 (A**2) : -0.02 REMARK 3 B33 (A**2) : 0.05 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.051 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.051 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.029 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.449 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1670 ; 0.026 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1163 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2289 ; 2.013 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2807 ; 1.218 ; 3.012 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 229 ; 6.742 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 71 ;36.671 ;23.099 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 258 ;11.326 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;18.912 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 245 ; 0.121 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1923 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 366 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1661 ;16.992 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1603 ;15.145 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 4AXR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JUN-12. REMARK 100 THE PDBE ID CODE IS EBI-52903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46257 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.38 REMARK 200 RESOLUTION RANGE LOW (A) : 45.91 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 12.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.0 REMARK 200 DATA REDUNDANCY : 9.8 REMARK 200 R MERGE (I) : 0.12 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.18900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.98800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.98800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.59450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.98800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.98800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 112.78350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.98800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.98800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.59450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.98800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.98800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 112.78350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 75.18900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 207 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG B CYS A 159 O HOH A 2227 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 21 CG ASP A 21 OD2 0.140 REMARK 500 ARG A 82 CZ ARG A 82 NH2 -0.084 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 76 CD - NE - CZ ANGL. DEV. = 8.4 DEGREES REMARK 500 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG A 76 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP A 98 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 171 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP A 179 CB - CG - OD2 ANGL. DEV. = -6.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 25 -139.57 58.29 REMARK 500 CYS A 71 75.99 -113.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TLA A1207 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KWN RELATED DB: PDB REMARK 900 1.2 A STRUCTURE OF THAUMATIN CRYSTALLIZED IN GEL REMARK 900 RELATED ID: 1LR2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THAUMATIN AT HIGH HYDROSTATIC REMARK 900 PRESSURE REMARK 900 RELATED ID: 1LR3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THAUMATIN AT HIGH HYDROSTATIC REMARK 900 PRESSURE REMARK 900 RELATED ID: 1LXZ RELATED DB: PDB REMARK 900 STRUCTURE OF THAUMATIN CRYSTALLIZED IN THE PRESENCE REMARK 900 OFGLYCEROL REMARK 900 RELATED ID: 1LY0 RELATED DB: PDB REMARK 900 STRUCTURE OF THAUMATIN CRYSTALLIZED IN THE PRESENCE REMARK 900 OFGLYCEROL REMARK 900 RELATED ID: 1PP3 RELATED DB: PDB REMARK 900 STRUCTURE OF THAUMATIN IN A HEXAGONAL SPACE GROUP REMARK 900 RELATED ID: 1RQW RELATED DB: PDB REMARK 900 THAUMATIN STRUCTURE AT 1.05 A RESOLUTION REMARK 900 RELATED ID: 1THI RELATED DB: PDB REMARK 900 THAUMATIN I REMARK 900 RELATED ID: 1THU RELATED DB: PDB REMARK 900 THAUMATIN ISOFORM B (MONOCLINIC CRYSTAL FORM) REMARK 900 RELATED ID: 1THV RELATED DB: PDB REMARK 900 THAUMATIN ISOFORM A (ORTHORHOMBIC CRYSTAL FORM) REMARK 900 RELATED ID: 1THW RELATED DB: PDB REMARK 900 THAUMATIN (TETRAGONAL CRYSTAL FORM) REMARK 900 RELATED ID: 2A7I RELATED DB: PDB REMARK 900 ON THE ROUTINE USE OF SOFT X-RAYS IN REMARK 900 MACROMOLECULARCRYSTALLOGRAPHY, PART III- THE OPTIMAL DATA REMARK 900 COLLECTIONWAVELENGTH REMARK 900 RELATED ID: 2BLR RELATED DB: PDB REMARK 900 THAUMATIN BEFORE A HIGH DOSE X-RAY "BURN" REMARK 900 RELATED ID: 2BLU RELATED DB: PDB REMARK 900 THAUMATIN AFTER A HIGH DOSE X-RAY "BURN" REMARK 900 RELATED ID: 2D8O RELATED DB: PDB REMARK 900 STRUCTURE OF VIL-THAUMATIN REMARK 900 RELATED ID: 2D8P RELATED DB: PDB REMARK 900 STRUCTURE OF HYPER-VIL-THAUMATIN REMARK 900 RELATED ID: 2VHK RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION (0.94 A) STRUCTURE OF PURIFIED REMARK 900 THAUMATIN I GROWN IN SODIUM L-TARTRATE AT 22C REMARK 900 RELATED ID: 2VHR RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION (0.95A) STRUCTURE OF PURIFIED REMARK 900 THAUMATIN I GROWN IN SODIUM L-TARTRATE AT 4 C REMARK 900 RELATED ID: 2VI1 RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION (1.04 A) STRUCTURE OF PURIFIED REMARK 900 THAUMATIN I GROWN IN SODIUM D-TARTRATE AT 22 C. REMARK 900 RELATED ID: 2VI2 RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION (1.05 A) STRUCTURE OF PURIFIED REMARK 900 THAUMATIN I GROWN IN SODIUM D-TARTRATE AT 4C REMARK 900 RELATED ID: 2VI3 RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION (0.98 A) STRUCTURE OF PURIFIED REMARK 900 THAUMATIN I GROWN IN SODIUM DL-TARTRATE AT 20 C REMARK 900 RELATED ID: 2VI4 RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION (1.10 A) STRUCTURE OF PURIFIED REMARK 900 THAUMATIN I GROWN IN SODIUM DL-TARTRATE AT 6 C. REMARK 900 RELATED ID: 2VU6 RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION (0.95 A) STRUCTURE OF PURIFIED REMARK 900 THAUMATIN I GROWN IN SODIUM MESO-TARTRATE AT 19 C. REMARK 900 RELATED ID: 2VU7 RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION (1.08 A) STRUCTURE OF PURIFIED REMARK 900 THAUMATIN I GROWN IN SODIUM MESO-TARTRATE AT 4 C REMARK 900 RELATED ID: 2WBZ RELATED DB: PDB REMARK 900 1.6 A STRUCTURE OF THAUMATIN CRYSTALLIZED WITHOUT REMARK 900 TARTRATE AT 4 C REMARK 900 RELATED ID: 4AXU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THAUMATIN FROM A AUTO-HARVESTED REMARK 900 CRYSTAL, CONTROL EXPERIMENT DBREF 4AXR A 1 207 UNP P02883 THM1_THADA 1 207 SEQRES 1 A 207 ALA THR PHE GLU ILE VAL ASN ARG CYS SER TYR THR VAL SEQRES 2 A 207 TRP ALA ALA ALA SER LYS GLY ASP ALA ALA LEU ASP ALA SEQRES 3 A 207 GLY GLY ARG GLN LEU ASN SER GLY GLU SER TRP THR ILE SEQRES 4 A 207 ASN VAL GLU PRO GLY THR ASN GLY GLY LYS ILE TRP ALA SEQRES 5 A 207 ARG THR ASP CYS TYR PHE ASP ASP SER GLY SER GLY ILE SEQRES 6 A 207 CYS LYS THR GLY ASP CYS GLY GLY LEU LEU ARG CYS LYS SEQRES 7 A 207 ARG PHE GLY ARG PRO PRO THR THR LEU ALA GLU PHE SER SEQRES 8 A 207 LEU ASN GLN TYR GLY LYS ASP TYR ILE ASP ILE SER ASN SEQRES 9 A 207 ILE LYS GLY PHE ASN VAL PRO MET ASN PHE SER PRO THR SEQRES 10 A 207 THR ARG GLY CYS ARG GLY VAL ARG CYS ALA ALA ASP ILE SEQRES 11 A 207 VAL GLY GLN CYS PRO ALA LYS LEU LYS ALA PRO GLY GLY SEQRES 12 A 207 GLY CYS ASN ASP ALA CYS THR VAL PHE GLN THR SER GLU SEQRES 13 A 207 TYR CYS CYS THR THR GLY LYS CYS GLY PRO THR GLU TYR SEQRES 14 A 207 SER ARG PHE PHE LYS ARG LEU CYS PRO ASP ALA PHE SER SEQRES 15 A 207 TYR VAL LEU ASP LYS PRO THR THR VAL THR CYS PRO GLY SEQRES 16 A 207 SER SER ASN TYR ARG VAL THR PHE CYS PRO THR ALA HET TLA A1207 10 HETNAM TLA L(+)-TARTARIC ACID FORMUL 2 TLA C4 H6 O6 FORMUL 3 HOH *275(H2 O) HELIX 1 1 ASP A 129 CYS A 134 1 6 HELIX 2 2 PRO A 135 LEU A 138 5 4 HELIX 3 3 ASP A 147 GLN A 153 1 7 HELIX 4 4 THR A 154 CYS A 159 1 6 HELIX 5 5 THR A 167 CYS A 177 1 11 SHEET 1 AA 5 SER A 36 ASN A 40 0 SHEET 2 AA 5 THR A 2 ASN A 7 -1 O PHE A 3 N ILE A 39 SHEET 3 AA 5 TYR A 199 PHE A 203 1 O TYR A 199 N GLU A 4 SHEET 4 AA 5 MET A 112 PRO A 116 -1 O ASN A 113 N THR A 202 SHEET 5 AA 5 VAL A 124 CYS A 126 -1 O VAL A 124 N PHE A 114 SHEET 1 AB 6 ALA A 23 LEU A 31 0 SHEET 2 AB 6 VAL A 13 SER A 18 -1 O VAL A 13 N LEU A 31 SHEET 3 AB 6 GLY A 48 ARG A 53 -1 O LYS A 49 N SER A 18 SHEET 4 AB 6 LEU A 87 GLN A 94 -1 O ALA A 88 N ILE A 50 SHEET 5 AB 6 LYS A 97 SER A 103 -1 O LYS A 97 N GLN A 94 SHEET 6 AB 6 VAL A 191 PRO A 194 -1 O VAL A 191 N ILE A 100 SHEET 1 AC 2 TYR A 57 PHE A 58 0 SHEET 2 AC 2 GLY A 64 ILE A 65 -1 O ILE A 65 N TYR A 57 SSBOND 1 CYS A 9 CYS A 204 1555 1555 2.14 SSBOND 2 CYS A 56 CYS A 66 1555 1555 2.23 SSBOND 3 CYS A 71 CYS A 77 1555 1555 2.09 SSBOND 4 CYS A 121 CYS A 193 1555 1555 2.17 SSBOND 5 CYS A 126 CYS A 177 1555 1555 2.16 SSBOND 6 CYS A 134 CYS A 145 1555 1555 2.12 SSBOND 7 CYS A 149 CYS A 158 1555 1555 2.07 SSBOND 8 CYS A 159 CYS A 164 1555 1555 2.26 CISPEP 1 PRO A 83 PRO A 84 0 7.95 SITE 1 AC1 12 ARG A 29 GLU A 35 SER A 36 PHE A 152 SITE 2 AC1 12 TYR A 157 HOH A2069 HOH A2071 HOH A2208 SITE 3 AC1 12 HOH A2213 HOH A2218 HOH A2221 HOH A2273 CRYST1 57.976 57.976 150.378 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017249 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017249 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006650 0.00000