HEADER TRANSFERASE 21-JUN-12 4AYS TITLE THE STRUCTURE OF AMYLOSUCRASE FROM D. RADIODURANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMYLOSUCRASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-AMYLASE; COMPND 5 EC: 2.4.1.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, GLUCAN SYNTHESIS, GH-13 EXPDTA X-RAY DIFFRACTION AUTHOR L.K.SKOV,S.PIZZUT,M.REMAUD-SIMEON,M.GAJHEDE,O.MIRZA REVDAT 2 20-DEC-23 4AYS 1 REMARK REVDAT 1 11-SEP-13 4AYS 0 JRNL AUTH L.K.SKOV,S.PIZZUT-SERIN,M.REMAUD-SIMEON,H.A.ERNST,M.GAJHEDE, JRNL AUTH 2 O.MIRZA JRNL TITL THE STRUCTURE OF AMYLOSUCRASE FROM DEINOCOCCUS RADIODURANS JRNL TITL 2 HAS AN UNUSUAL OPEN ACTIVE-SITE TOPOLOGY JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 69 973 2013 JRNL REFN ESSN 1744-3091 JRNL PMID 23989143 JRNL DOI 10.1107/S1744309113021714 REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 946 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.6220 - 6.0203 0.99 2675 123 0.2034 0.2085 REMARK 3 2 6.0203 - 4.7809 1.00 2504 141 0.1770 0.2196 REMARK 3 3 4.7809 - 4.1773 1.00 2497 136 0.1647 0.1886 REMARK 3 4 4.1773 - 3.7956 1.00 2455 148 0.1922 0.2698 REMARK 3 5 3.7956 - 3.5237 1.00 2471 135 0.2302 0.2832 REMARK 3 6 3.5237 - 3.3161 1.00 2437 140 0.2421 0.2958 REMARK 3 7 3.3161 - 3.1501 1.00 2447 123 0.2764 0.3104 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 44.07 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 80.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.12950 REMARK 3 B22 (A**2) : -4.12950 REMARK 3 B33 (A**2) : 8.25900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4800 REMARK 3 ANGLE : 0.743 6549 REMARK 3 CHIRALITY : 0.054 708 REMARK 3 PLANARITY : 0.003 861 REMARK 3 DIHEDRAL : 13.633 1710 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 16:62) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4263 -44.5487 -4.8911 REMARK 3 T TENSOR REMARK 3 T11: 0.7230 T22: 0.2854 REMARK 3 T33: 0.6569 T12: -0.1251 REMARK 3 T13: -0.2476 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 6.1555 L22: 3.9673 REMARK 3 L33: 4.3979 L12: 1.4348 REMARK 3 L13: 0.1244 L23: 0.0969 REMARK 3 S TENSOR REMARK 3 S11: 0.2392 S12: 0.6312 S13: -0.9060 REMARK 3 S21: -0.4056 S22: 0.1078 S23: 0.7590 REMARK 3 S31: 1.1785 S32: -0.2471 S33: -0.1787 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 63:164) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8153 -34.9290 20.7874 REMARK 3 T TENSOR REMARK 3 T11: 0.5235 T22: 0.6134 REMARK 3 T33: 0.5434 T12: -0.1966 REMARK 3 T13: 0.0368 T23: 0.2814 REMARK 3 L TENSOR REMARK 3 L11: 2.5022 L22: 2.4512 REMARK 3 L33: 1.2963 L12: 0.7685 REMARK 3 L13: -0.1899 L23: 1.6566 REMARK 3 S TENSOR REMARK 3 S11: -0.1668 S12: -0.8846 S13: -0.7300 REMARK 3 S21: 0.6508 S22: 0.3460 S23: 0.3774 REMARK 3 S31: 0.7045 S32: -0.4744 S33: 0.0507 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 165:210) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4443 -52.6896 10.5303 REMARK 3 T TENSOR REMARK 3 T11: 0.9499 T22: 0.8202 REMARK 3 T33: 1.0649 T12: 0.1559 REMARK 3 T13: -0.2932 T23: 0.1433 REMARK 3 L TENSOR REMARK 3 L11: 2.7299 L22: 4.7974 REMARK 3 L33: 3.7181 L12: -2.1682 REMARK 3 L13: 0.2383 L23: 0.9007 REMARK 3 S TENSOR REMARK 3 S11: 0.2023 S12: -0.1120 S13: -1.1502 REMARK 3 S21: 0.1058 S22: 0.1587 S23: -0.1336 REMARK 3 S31: 1.3725 S32: 1.0113 S33: -0.3298 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 211:267) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0301 -47.9986 10.8842 REMARK 3 T TENSOR REMARK 3 T11: 0.8195 T22: 0.6075 REMARK 3 T33: 0.8386 T12: 0.1021 REMARK 3 T13: -0.3132 T23: 0.1367 REMARK 3 L TENSOR REMARK 3 L11: 2.0338 L22: 1.2490 REMARK 3 L33: 2.6373 L12: 1.4402 REMARK 3 L13: -0.9756 L23: -0.1034 REMARK 3 S TENSOR REMARK 3 S11: 0.4722 S12: -0.8445 S13: -1.5131 REMARK 3 S21: 0.0178 S22: -0.1280 S23: -0.3581 REMARK 3 S31: 1.0877 S32: 1.1519 S33: -0.2155 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 268:329) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8918 -36.8669 6.3191 REMARK 3 T TENSOR REMARK 3 T11: 0.5341 T22: 0.4894 REMARK 3 T33: 0.4841 T12: -0.0153 REMARK 3 T13: -0.1518 T23: 0.0683 REMARK 3 L TENSOR REMARK 3 L11: 4.9427 L22: 4.0132 REMARK 3 L33: 3.3694 L12: -0.6636 REMARK 3 L13: -1.2892 L23: 0.5390 REMARK 3 S TENSOR REMARK 3 S11: 0.3046 S12: -0.6568 S13: -0.6714 REMARK 3 S21: -0.1211 S22: 0.0307 S23: -0.2707 REMARK 3 S31: 0.0788 S32: 0.6583 S33: -0.3099 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 330:418) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4565 -20.7718 16.4647 REMARK 3 T TENSOR REMARK 3 T11: 0.2803 T22: 0.8328 REMARK 3 T33: 0.5561 T12: -0.0783 REMARK 3 T13: -0.0521 T23: -0.1580 REMARK 3 L TENSOR REMARK 3 L11: 2.1828 L22: 2.8891 REMARK 3 L33: 2.8248 L12: 0.4606 REMARK 3 L13: 0.7730 L23: 0.5618 REMARK 3 S TENSOR REMARK 3 S11: -0.0827 S12: -0.3645 S13: 0.1791 REMARK 3 S21: -0.0041 S22: 0.4652 S23: -0.6955 REMARK 3 S31: 0.0376 S32: 1.2913 S33: -0.1974 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 419:460) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6628 -23.8801 34.1668 REMARK 3 T TENSOR REMARK 3 T11: 0.6996 T22: 1.4658 REMARK 3 T33: 0.8132 T12: 0.2310 REMARK 3 T13: -0.3011 T23: -0.0698 REMARK 3 L TENSOR REMARK 3 L11: 2.0336 L22: 4.0091 REMARK 3 L33: 0.5203 L12: -0.3460 REMARK 3 L13: 0.8381 L23: -0.0237 REMARK 3 S TENSOR REMARK 3 S11: -0.0121 S12: 0.2463 S13: 0.4531 REMARK 3 S21: 0.3733 S22: 0.0537 S23: -0.9213 REMARK 3 S31: 0.4540 S32: 0.6131 S33: -0.1845 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 461:556) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8445 -24.0480 33.7919 REMARK 3 T TENSOR REMARK 3 T11: 0.7143 T22: 0.9103 REMARK 3 T33: 0.3248 T12: 0.0408 REMARK 3 T13: -0.0972 T23: 0.0597 REMARK 3 L TENSOR REMARK 3 L11: 3.1634 L22: 4.4518 REMARK 3 L33: 4.4100 L12: -0.3041 REMARK 3 L13: 0.2115 L23: -0.5970 REMARK 3 S TENSOR REMARK 3 S11: 0.0882 S12: -1.1000 S13: -0.1845 REMARK 3 S21: 1.2171 S22: 0.2777 S23: 0.0216 REMARK 3 S31: 0.6359 S32: -0.1211 S33: -0.2420 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 557:610) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9748 -5.2501 17.1170 REMARK 3 T TENSOR REMARK 3 T11: 0.6382 T22: 0.5249 REMARK 3 T33: 0.4628 T12: -0.2296 REMARK 3 T13: -0.1035 T23: -0.0676 REMARK 3 L TENSOR REMARK 3 L11: 4.4940 L22: 4.1866 REMARK 3 L33: 4.5738 L12: 2.2948 REMARK 3 L13: 1.6166 L23: -0.0877 REMARK 3 S TENSOR REMARK 3 S11: -0.2767 S12: -0.1004 S13: 0.7055 REMARK 3 S21: -0.0210 S22: 0.1009 S23: -0.2639 REMARK 3 S31: -0.8664 S32: 0.4197 S33: 0.1752 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 611:643) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6876 -0.0458 23.7102 REMARK 3 T TENSOR REMARK 3 T11: 0.7118 T22: 0.6037 REMARK 3 T33: 0.7222 T12: -0.0639 REMARK 3 T13: -0.1552 T23: -0.1495 REMARK 3 L TENSOR REMARK 3 L11: 5.0524 L22: 3.2756 REMARK 3 L33: 6.4427 L12: 3.6879 REMARK 3 L13: 3.4266 L23: 1.7274 REMARK 3 S TENSOR REMARK 3 S11: -0.0597 S12: -0.9177 S13: 1.3193 REMARK 3 S21: 0.7751 S22: -0.6833 S23: 0.6760 REMARK 3 S31: -1.1634 S32: -0.3317 S33: 0.7095 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 1 TO 15, 124 TO 151, 229 TO REMARK 3 233 AND 529 TO 534 ARE DISORDERED REMARK 4 REMARK 4 4AYS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1290052955. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.84300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18489 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3UCQ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.18500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 64.59000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 64.59000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 91.77750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 64.59000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 64.59000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.59250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 64.59000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.59000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 91.77750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 64.59000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.59000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.59250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.18500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 LEU A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 5 REMARK 465 LEU A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 ARG A 9 REMARK 465 LEU A 10 REMARK 465 ARG A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 PHE A 14 REMARK 465 ASP A 15 REMARK 465 LEU A 124 REMARK 465 LEU A 125 REMARK 465 ARG A 126 REMARK 465 PRO A 127 REMARK 465 ARG A 128 REMARK 465 ASP A 129 REMARK 465 GLY A 130 REMARK 465 GLU A 131 REMARK 465 ASN A 132 REMARK 465 ASP A 133 REMARK 465 GLY A 134 REMARK 465 GLY A 135 REMARK 465 TYR A 136 REMARK 465 ALA A 137 REMARK 465 VAL A 138 REMARK 465 GLN A 139 REMARK 465 ASP A 140 REMARK 465 TYR A 141 REMARK 465 ARG A 142 REMARK 465 SER A 143 REMARK 465 VAL A 144 REMARK 465 ARG A 145 REMARK 465 PRO A 146 REMARK 465 ASP A 147 REMARK 465 LEU A 148 REMARK 465 GLY A 149 REMARK 465 THR A 150 REMARK 465 ILE A 151 REMARK 465 ASN A 229 REMARK 465 GLY A 230 REMARK 465 GLU A 231 REMARK 465 ALA A 232 REMARK 465 GLY A 233 REMARK 465 ALA A 529 REMARK 465 ASP A 530 REMARK 465 ALA A 531 REMARK 465 ALA A 532 REMARK 465 THR A 533 REMARK 465 GLY A 534 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 644 CA C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS A 559 NH1 ARG A 581 2.15 REMARK 500 O THR A 564 NH2 ARG A 581 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 435 C - N - CA ANGL. DEV. = 11.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 98 30.06 -155.90 REMARK 500 PHE A 198 -167.77 -127.16 REMARK 500 PRO A 202 -91.37 -66.93 REMARK 500 ARG A 204 47.17 -85.53 REMARK 500 PRO A 219 -85.79 -59.34 REMARK 500 ASP A 220 60.21 -68.40 REMARK 500 ALA A 222 58.73 -152.41 REMARK 500 PRO A 223 57.56 -91.33 REMARK 500 PHE A 240 -100.03 -107.75 REMARK 500 ARG A 333 -125.28 49.90 REMARK 500 VAL A 339 -132.21 -119.63 REMARK 500 SER A 405 -72.54 -97.91 REMARK 500 THR A 557 107.37 -55.11 REMARK 500 GLU A 620 28.50 49.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 999 REMARK 999 SEQUENCE REMARK 999 CONTAINS 4 EXTRA RESIDUES (GLPG) AT THE N-TERMINUS DBREF 4AYS A 1 644 UNP Q9RVT9 Q9RVT9_DEIRA 1 644 SEQADV 4AYS GLY A -3 UNP Q9RVT9 EXPRESSION TAG SEQADV 4AYS LEU A -2 UNP Q9RVT9 EXPRESSION TAG SEQADV 4AYS PRO A -1 UNP Q9RVT9 EXPRESSION TAG SEQADV 4AYS GLY A 0 UNP Q9RVT9 EXPRESSION TAG SEQRES 1 A 648 GLY LEU PRO GLY MET LEU THR PRO ASP LEU ALA ALA ARG SEQRES 2 A 648 LEU ARG LEU ALA PHE ASP ASP ASP ARG ASP ALA GLU THR SEQRES 3 A 648 PHE ARG LEU ARG LEU GLU ARG TYR GLY PRO GLU LEU ALA SEQRES 4 A 648 ASP ASN LEU ARG ALA VAL TYR GLY ASN HIS ALA ASP ALA SEQRES 5 A 648 LEU ILE GLY GLU LEU LEU GLU VAL MET LEU HIS ALA TYR SEQRES 6 A 648 HIS ALA ARG PRO ALA ASP LEU LYS ARG LEU ASP GLU ALA SEQRES 7 A 648 ARG LEU LEU ARG PRO ASP TRP LEU GLN GLY PRO GLU MET SEQRES 8 A 648 VAL GLY TYR VAL ALA TYR VAL ASP ARG PHE ALA GLY THR SEQRES 9 A 648 LEU ARG GLY VAL GLY GLU ARG LEU GLU TYR LEU GLU GLY SEQRES 10 A 648 LEU GLY VAL THR TYR LEU HIS LEU LEU PRO LEU LEU ARG SEQRES 11 A 648 PRO ARG ASP GLY GLU ASN ASP GLY GLY TYR ALA VAL GLN SEQRES 12 A 648 ASP TYR ARG SER VAL ARG PRO ASP LEU GLY THR ILE ASP SEQRES 13 A 648 ASP LEU SER ALA LEU ALA ARG GLU LEU ARG GLY ARG GLY SEQRES 14 A 648 ILE SER LEU VAL LEU ASP LEU VAL LEU ASN HIS VAL ALA SEQRES 15 A 648 GLU GLU HIS GLU TRP ALA VAL ARG ALA THR ALA GLY GLU SEQRES 16 A 648 ALA ALA TYR ARG ASP TYR PHE HIS ILE PHE PRO ASP ARG SEQRES 17 A 648 THR GLN PRO ASP ALA TYR GLU ARG THR LEU PRO GLU ILE SEQRES 18 A 648 PHE PRO ASP PHE ALA PRO GLY ASN PHE THR TRP ASN GLY SEQRES 19 A 648 GLU ALA GLY GLY TRP VAL TRP THR THR PHE ASN ARG SER SEQRES 20 A 648 GLN TRP ASP VAL ASN TRP GLY ASN PRO ALA VAL PHE ARG SEQRES 21 A 648 GLU TYR LEU ASP LEU ILE LEU THR LEU ALA ASN ARG GLY SEQRES 22 A 648 VAL GLU VAL PHE ARG LEU ASP ALA ILE ALA PHE LEU TRP SEQRES 23 A 648 LYS ARG LEU GLY THR ASP CYS GLN ASN GLN PRO GLU VAL SEQRES 24 A 648 HIS ARG LEU THR HIS ALA LEU ARG ALA ALA THR ARG ILE SEQRES 25 A 648 VAL ALA PRO ALA VAL ALA PHE LYS ALA GLU ALA ILE VAL SEQRES 26 A 648 ALA PRO GLY ASP LEU ILE HIS TYR LEU GLY SER ARG ASP SEQRES 27 A 648 HIS HIS GLY ARG VAL SER ASP MET ALA TYR HIS ASN SER SEQRES 28 A 648 LEU MET VAL GLN LEU TRP SER SER LEU ALA SER ARG ASP SEQRES 29 A 648 THR ARG LEU LEU THR ALA ALA LEU ALA ALA PHE PRO PRO SEQRES 30 A 648 LYS PRO THR ASN THR THR TRP GLY VAL TYR VAL ARG CYS SEQRES 31 A 648 HIS ASP ASP ILE GLY TRP ALA ILE ALA ASP GLU ASP ALA SEQRES 32 A 648 ALA ARG VAL GLY LEU SER GLY PRO ALA HIS ARG HIS PHE SEQRES 33 A 648 LEU SER ASP PHE TYR SER GLY GLU PHE PRO GLY SER PHE SEQRES 34 A 648 ALA ARG GLY LEU VAL PHE GLN HIS HIS PRO GLN THR GLY SEQRES 35 A 648 ASP ARG ARG ILE SER GLY THR ALA ALA SER LEU ALA GLY SEQRES 36 A 648 LEU ASP LEU ALA LEU GLU THR GLY ASP ALA GLU ARG VAL SEQRES 37 A 648 ASN ASP ALA LEU ALA ARG LEU LEU LEU LEU HIS ALA VAL SEQRES 38 A 648 MET LEU GLY PHE GLY GLY VAL PRO LEU LEU TYR MET GLY SEQRES 39 A 648 ASP GLU LEU ALA LEU LEU ASN ASP THR ASP PHE ALA ALA SEQRES 40 A 648 VAL PRO ALA HIS ALA ALA ASP ASN ARG TRP VAL HIS ARG SEQRES 41 A 648 PRO GLN MET ASP TRP GLU LEU VAL ALA SER ALA GLN ALA SEQRES 42 A 648 ASP ALA ALA THR GLY GLN PRO VAL THR PRO ALA GLY ARG SEQRES 43 A 648 MET PHE ALA GLY LEU ARG HIS LEU LEU ALA VAL ARG ARG SEQRES 44 A 648 ARG THR PRO HIS LEU HIS ALA SER THR GLU SER ARG PRO SEQRES 45 A 648 LEU PRO SER PRO ASP PRO CYS VAL LEU LEU LEU ARG ARG SEQRES 46 A 648 GLU HIS PRO THR GLY VAL LEU LEU GLN VAL TYR ASN PHE SEQRES 47 A 648 SER GLU HIS HIS ILE THR PHE PRO THR TRP PRO LEU GLN SEQRES 48 A 648 GLU GLN LEU GLY ALA VAL ALA HIS ASP LEU LEU GLY GLU SEQRES 49 A 648 SER GLN PHE HIS LEU GLY GLY PRO ASP LEU ALA LEU GLU SEQRES 50 A 648 PRO TYR ARG ALA LEU TRP LEU VAL ALA GLY GLY HELIX 1 1 ASP A 16 GLY A 43 1 28 HELIX 2 2 HIS A 45 ARG A 64 1 20 HELIX 3 3 PRO A 65 ARG A 78 1 14 HELIX 4 4 VAL A 94 GLY A 99 1 6 HELIX 5 5 THR A 100 ARG A 107 1 8 HELIX 6 6 ARG A 107 GLY A 115 1 9 HELIX 7 7 ASP A 152 ARG A 164 1 13 HELIX 8 8 HIS A 181 ALA A 189 1 9 HELIX 9 9 GLU A 191 ASP A 196 1 6 HELIX 10 10 GLN A 206 GLU A 211 1 6 HELIX 11 11 ASN A 251 GLY A 269 1 19 HELIX 12 12 ALA A 277 LEU A 281 5 5 HELIX 13 13 GLN A 292 ALA A 310 1 19 HELIX 14 14 ALA A 322 ILE A 327 1 6 HELIX 15 15 HIS A 328 GLY A 331 5 4 HELIX 16 16 SER A 332 HIS A 336 5 5 HELIX 17 17 HIS A 345 ARG A 359 1 15 HELIX 18 18 THR A 361 ALA A 370 1 10 HELIX 19 19 ALA A 395 VAL A 402 1 8 HELIX 20 20 GLY A 406 GLY A 419 1 14 HELIX 21 21 THR A 445 GLY A 451 1 7 HELIX 22 22 GLY A 451 THR A 458 1 8 HELIX 23 23 ASP A 460 GLY A 480 1 21 HELIX 24 24 GLY A 490 ALA A 494 5 5 HELIX 25 25 ASP A 498 ALA A 503 5 6 HELIX 26 26 VAL A 504 ALA A 509 1 6 HELIX 27 27 ASP A 510 HIS A 515 5 6 HELIX 28 28 ASP A 520 GLN A 528 1 9 HELIX 29 29 THR A 538 THR A 557 1 20 HELIX 30 30 PRO A 558 HIS A 561 5 4 HELIX 31 31 THR A 603 GLY A 611 1 9 SHEET 1 AA 9 GLY A 89 TYR A 93 0 SHEET 2 AA 9 TYR A 118 LEU A 122 1 O TYR A 118 N TYR A 90 SHEET 3 AA 9 SER A 167 VAL A 173 1 O SER A 167 N LEU A 119 SHEET 4 AA 9 VAL A 272 ASP A 276 1 O VAL A 272 N LEU A 170 SHEET 5 AA 9 ALA A 314 ALA A 317 1 O ALA A 314 N PHE A 273 SHEET 6 AA 9 MET A 342 TYR A 344 1 O MET A 342 N ALA A 317 SHEET 7 AA 9 THR A 379 VAL A 382 1 O THR A 379 N ALA A 343 SHEET 8 AA 9 VAL A 484 TYR A 488 1 O VAL A 484 N VAL A 382 SHEET 9 AA 9 GLY A 89 TYR A 93 1 O GLY A 89 N LEU A 487 SHEET 1 AB 2 HIS A 176 ALA A 178 0 SHEET 2 AB 2 GLN A 244 ASP A 246 -1 O TRP A 245 N VAL A 177 SHEET 1 AC 3 ILE A 200 PHE A 201 0 SHEET 2 AC 3 TRP A 235 TRP A 237 -1 O TRP A 235 N PHE A 201 SHEET 3 AC 3 PHE A 226 THR A 227 -1 O THR A 227 N VAL A 236 SHEET 1 AD 2 LEU A 429 HIS A 433 0 SHEET 2 AD 2 ARG A 440 SER A 443 -1 O ARG A 441 N PHE A 431 SHEET 1 AE 6 ARG A 567 LEU A 569 0 SHEET 2 AE 6 VAL A 576 HIS A 583 -1 O LEU A 578 N LEU A 569 SHEET 3 AE 6 GLY A 586 ASN A 593 -1 O GLY A 586 N HIS A 583 SHEET 4 AE 6 ALA A 637 ALA A 642 -1 O LEU A 638 N VAL A 591 SHEET 5 AE 6 VAL A 613 ASP A 616 -1 O HIS A 615 N VAL A 641 SHEET 6 AE 6 GLN A 622 HIS A 624 -1 O PHE A 623 N ALA A 614 SHEET 1 AF 2 ILE A 599 PRO A 602 0 SHEET 2 AF 2 ASP A 629 LEU A 632 -1 O LEU A 630 N PHE A 601 CRYST1 129.180 129.180 122.370 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007741 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007741 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008172 0.00000