HEADER MEMBRANE PROTEIN 22-JUN-12 4AYT TITLE STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10 MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ABC TRANSPORTER, RESIDUES 152-738; COMPND 5 SYNONYM: ATP-BINDING CASSETTE TRANSPORTER 10, ABC TRANSPORTER 10 COMPND 6 PROTEIN, MITOCHONDRIAL ATP-BINDING CASSETTE 2, M-ABC2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFB-CT10HF-LIC KEYWDS MEMBRANE PROTEIN, MITOCHONDRIAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.C.W.PIKE,C.A.SHINTRE,Q.LI,J.KIM,F.VON DELFT,A.J.BARR,S.DAS, AUTHOR 2 A.CHAIKUAD,X.XIA,A.QUIGLEY,Y.DONG,L.DONG,T.KROJER,M.VOLLMAR, AUTHOR 3 J.R.C.MUNIZ,J.E.BRAY,G.BERRIDGE,R.CHALK,O.GILEADI,N.BURGESS-BROWN, AUTHOR 4 L.SHRESTHA,S.GOUBIN,J.YANG,P.MAHAJAN,S.MUKHOPADHYAY,A.N.BULLOCK, AUTHOR 5 C.H.ARROWSMITH,J.WEIGELT,C.BOUNTRA,A.M.EDWARDS,E.P.CARPENTER REVDAT 7 20-DEC-23 4AYT 1 REMARK LINK REVDAT 6 24-JAN-18 4AYT 1 AUTHOR JRNL REVDAT 5 25-MAR-15 4AYT 1 JRNL REVDAT 4 26-JUN-13 4AYT 1 JRNL REVDAT 3 12-JUN-13 4AYT 1 JRNL REVDAT 2 05-JUN-13 4AYT 1 AUTHOR JRNL REVDAT 1 11-JUL-12 4AYT 0 SPRSDE 11-JUL-12 4AYT 2YL4 JRNL AUTH C.A.SHINTRE,A.C.W.PIKE,Q.LI,J.KIM,A.J.BARR,S.GOUBIN, JRNL AUTH 2 L.SHRESTHA,J.YANG,G.BERRIDGE,J.ROSS,P.J.STANSFELD, JRNL AUTH 3 M.S.P.SANSOM,A.M.EDWARDS,C.BOUNTRA,B.D.MARSDEN,F.VON DELFT, JRNL AUTH 4 A.N.BULLOCK,O.GILEADI,N.A.BURGESS-BROWN,E.P.CARPENTER JRNL TITL STRUCTURES OF ABCB10, A HUMAN ATP-BINDING CASSETTE JRNL TITL 2 TRANSPORTER IN APO- AND NUCLEOTIDE-BOUND STATES JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 9710 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23716676 JRNL DOI 10.1073/PNAS.1217042110 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 20519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 1064 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.69 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2977 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2173 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2810 REMARK 3 BIN R VALUE (WORKING SET) : 0.2146 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.61 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 167 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4227 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 211 REMARK 3 SOLVENT ATOMS : 55 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.29700 REMARK 3 B22 (A**2) : 3.29700 REMARK 3 B33 (A**2) : -6.59400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.333 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.696 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.322 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.764 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.331 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.897 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.860 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4520 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6109 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2151 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 85 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 669 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4520 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 605 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 4 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5393 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.05 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.55 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.26 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=MG. NUMBER OF REMARK 3 ATOMS WITH PROPER CCP4 ATOM TYPE=4501. NUMBER WITH APPROX REMARK 3 DEFAULT CCP4 ATOM TYPE=0. NUMBER TREATED BY BAD NON-BONDED REMARK 3 CONTACTS=1. THIS ENTRY HAS BEEN REREFINED WITH BUSTER 2.11.2, TO REMARK 3 REPLACE 2YL4. RE-REFINEMENT OF A PROTEIN-ONLY MODEL GAVE WEAK REMARK 3 DENSITY FOR SOME OF THE LIPID CHAINS MODELLED IN THE PREVIOUS REMARK 3 (OBSOLETED) ENTRY (2YL4) AND THESE HAVE BEEN OMITTED FROM THE REMARK 3 REVISED MODEL. REMARK 4 REMARK 4 4AYT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1290053004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20523 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 60.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.82000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4AYW REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CHLORIDE, 0.1 M GLYCINE REMARK 280 PH 9.5, 37% (V/V) PEG 300. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.51667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.03333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 33.03333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 16.51667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -126.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 16.51667 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2002 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 151 REMARK 465 ALA A 152 REMARK 465 GLY A 153 REMARK 465 LEU A 718 REMARK 465 LEU A 719 REMARK 465 SER A 720 REMARK 465 LYS A 721 REMARK 465 PRO A 722 REMARK 465 ASN A 723 REMARK 465 GLY A 724 REMARK 465 ILE A 725 REMARK 465 TYR A 726 REMARK 465 ARG A 727 REMARK 465 LYS A 728 REMARK 465 LEU A 729 REMARK 465 MET A 730 REMARK 465 ASN A 731 REMARK 465 LYS A 732 REMARK 465 GLN A 733 REMARK 465 SER A 734 REMARK 465 PHE A 735 REMARK 465 ILE A 736 REMARK 465 SER A 737 REMARK 465 ALA A 738 REMARK 465 ALA A 739 REMARK 465 GLU A 740 REMARK 465 ASN A 741 REMARK 465 LEU A 742 REMARK 465 TYR A 743 REMARK 465 PHE A 744 REMARK 465 GLN A 745 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 156 CG CD OE1 OE2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LEU A 161 CG CD1 CD2 REMARK 470 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 267 CD NE CZ NH1 NH2 REMARK 470 LYS A 338 CD CE NZ REMARK 470 LYS A 390 CG CD CE NZ REMARK 470 LYS A 495 CD CE NZ REMARK 470 SER A 529 OG REMARK 470 GLU A 576 CG CD OE1 OE2 REMARK 470 LYS A 630 CE NZ REMARK 470 LEU A 633 CG CD1 CD2 REMARK 470 THR A 661 OG1 CG2 REMARK 470 LEU A 664 CG CD1 CD2 REMARK 470 GLU A 669 CG CD OE1 OE2 REMARK 470 GLN A 673 CG CD OE1 NE2 REMARK 470 HIS A 690 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 691 NE CZ NH1 NH2 REMARK 470 LYS A 696 CD CE NZ REMARK 470 LYS A 708 CG CD CE NZ REMARK 470 GLU A 711 CG CD OE1 OE2 REMARK 470 GLU A 716 CG CD OE1 OE2 REMARK 470 GLU A 717 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 276 -68.32 -101.41 REMARK 500 THR A 287 -97.96 -129.21 REMARK 500 PHE A 477 -62.25 -90.87 REMARK 500 ASP A 594 85.91 -151.20 REMARK 500 PRO A 595 0.62 -57.86 REMARK 500 VAL A 627 -154.83 -95.88 REMARK 500 LYS A 630 23.50 -74.77 REMARK 500 ALA A 660 61.35 -114.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CDL A 1721 REMARK 610 LMT A 1723 REMARK 610 CDL A 1727 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 534 OG REMARK 620 2 GLN A 575 OE1 87.0 REMARK 620 3 ACP A 900 O3G 151.7 88.3 REMARK 620 4 ACP A 900 O2B 85.0 149.0 84.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACP A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLY A 1717 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT A 1720 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CDL A 1721 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT A 1723 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT A 1724 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CDL A 1727 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AYW RELATED DB: PDB REMARK 900 STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 (PLATE REMARK 900 FORM) DBREF 4AYT A 152 738 UNP Q9NRK6 ABCBA_HUMAN 152 738 SEQADV 4AYT MET A 151 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYT ALA A 739 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYT GLU A 740 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYT ASN A 741 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYT LEU A 742 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYT TYR A 743 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYT PHE A 744 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYT GLN A 745 UNP Q9NRK6 EXPRESSION TAG SEQRES 1 A 595 MET ALA GLY LEU PRO GLU ALA ARG LYS LEU LEU GLY LEU SEQRES 2 A 595 ALA TYR PRO GLU ARG ARG ARG LEU ALA ALA ALA VAL GLY SEQRES 3 A 595 PHE LEU THR MET SER SER VAL ILE SER MET SER ALA PRO SEQRES 4 A 595 PHE PHE LEU GLY LYS ILE ILE ASP VAL ILE TYR THR ASN SEQRES 5 A 595 PRO THR VAL ASP TYR SER ASP ASN LEU THR ARG LEU CYS SEQRES 6 A 595 LEU GLY LEU SER ALA VAL PHE LEU CYS GLY ALA ALA ALA SEQRES 7 A 595 ASN ALA ILE ARG VAL TYR LEU MET GLN THR SER GLY GLN SEQRES 8 A 595 ARG ILE VAL ASN ARG LEU ARG THR SER LEU PHE SER SER SEQRES 9 A 595 ILE LEU ARG GLN GLU VAL ALA PHE PHE ASP LYS THR ARG SEQRES 10 A 595 THR GLY GLU LEU ILE ASN ARG LEU SER SER ASP THR ALA SEQRES 11 A 595 LEU LEU GLY ARG SER VAL THR GLU ASN LEU SER ASP GLY SEQRES 12 A 595 LEU ARG ALA GLY ALA GLN ALA SER VAL GLY ILE SER MET SEQRES 13 A 595 MET PHE PHE VAL SER PRO ASN LEU ALA THR PHE VAL LEU SEQRES 14 A 595 SER VAL VAL PRO PRO VAL SER ILE ILE ALA VAL ILE TYR SEQRES 15 A 595 GLY ARG TYR LEU ARG LYS LEU THR LYS VAL THR GLN ASP SEQRES 16 A 595 SER LEU ALA GLN ALA THR GLN LEU ALA GLU GLU ARG ILE SEQRES 17 A 595 GLY ASN VAL ARG THR VAL ARG ALA PHE GLY LYS GLU MET SEQRES 18 A 595 THR GLU ILE GLU LYS TYR ALA SER LYS VAL ASP HIS VAL SEQRES 19 A 595 MET GLN LEU ALA ARG LYS GLU ALA PHE ALA ARG ALA GLY SEQRES 20 A 595 PHE PHE GLY ALA THR GLY LEU SER GLY ASN LEU ILE VAL SEQRES 21 A 595 LEU SER VAL LEU TYR LYS GLY GLY LEU LEU MET GLY SER SEQRES 22 A 595 ALA HIS MET THR VAL GLY GLU LEU SER SER PHE LEU MET SEQRES 23 A 595 TYR ALA PHE TRP VAL GLY ILE SER ILE GLY GLY LEU SER SEQRES 24 A 595 SER PHE TYR SER GLU LEU MET LYS GLY LEU GLY ALA GLY SEQRES 25 A 595 GLY ARG LEU TRP GLU LEU LEU GLU ARG GLU PRO LYS LEU SEQRES 26 A 595 PRO PHE ASN GLU GLY VAL ILE LEU ASN GLU LYS SER PHE SEQRES 27 A 595 GLN GLY ALA LEU GLU PHE LYS ASN VAL HIS PHE ALA TYR SEQRES 28 A 595 PRO ALA ARG PRO GLU VAL PRO ILE PHE GLN ASP PHE SER SEQRES 29 A 595 LEU SER ILE PRO SER GLY SER VAL THR ALA LEU VAL GLY SEQRES 30 A 595 PRO SER GLY SER GLY LYS SER THR VAL LEU SER LEU LEU SEQRES 31 A 595 LEU ARG LEU TYR ASP PRO ALA SER GLY THR ILE SER LEU SEQRES 32 A 595 ASP GLY HIS ASP ILE ARG GLN LEU ASN PRO VAL TRP LEU SEQRES 33 A 595 ARG SER LYS ILE GLY THR VAL SER GLN GLU PRO ILE LEU SEQRES 34 A 595 PHE SER CYS SER ILE ALA GLU ASN ILE ALA TYR GLY ALA SEQRES 35 A 595 ASP ASP PRO SER SER VAL THR ALA GLU GLU ILE GLN ARG SEQRES 36 A 595 VAL ALA GLU VAL ALA ASN ALA VAL ALA PHE ILE ARG ASN SEQRES 37 A 595 PHE PRO GLN GLY PHE ASN THR VAL VAL GLY GLU LYS GLY SEQRES 38 A 595 VAL LEU LEU SER GLY GLY GLN LYS GLN ARG ILE ALA ILE SEQRES 39 A 595 ALA ARG ALA LEU LEU LYS ASN PRO LYS ILE LEU LEU LEU SEQRES 40 A 595 ASP GLU ALA THR SER ALA LEU ASP ALA GLU ASN GLU TYR SEQRES 41 A 595 LEU VAL GLN GLU ALA LEU ASP ARG LEU MET ASP GLY ARG SEQRES 42 A 595 THR VAL LEU VAL ILE ALA HIS ARG LEU SER THR ILE LYS SEQRES 43 A 595 ASN ALA ASN MET VAL ALA VAL LEU ASP GLN GLY LYS ILE SEQRES 44 A 595 THR GLU TYR GLY LYS HIS GLU GLU LEU LEU SER LYS PRO SEQRES 45 A 595 ASN GLY ILE TYR ARG LYS LEU MET ASN LYS GLN SER PHE SEQRES 46 A 595 ILE SER ALA ALA GLU ASN LEU TYR PHE GLN HET GLY A1717 5 HET MG A 801 1 HET ACP A 900 31 HET LMT A1720 35 HET CDL A1721 74 HET LMT A1723 12 HET LMT A1724 35 HET CDL A1727 18 HETNAM GLY GLYCINE HETNAM MG MAGNESIUM ION HETNAM ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER HETNAM LMT DODECYL-BETA-D-MALTOSIDE HETNAM CDL CARDIOLIPIN HETSYN ACP ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE HETSYN CDL DIPHOSPHATIDYL GLYCEROL; BIS-(1,2-DIACYL-SN-GLYCERO-3- HETSYN 2 CDL PHOSPHO)-1',3'-SN-GLYCEROL FORMUL 2 GLY C2 H5 N O2 FORMUL 3 MG MG 2+ FORMUL 4 ACP C11 H18 N5 O12 P3 FORMUL 5 LMT 3(C24 H46 O11) FORMUL 6 CDL 2(C81 H156 O17 P2 2-) FORMUL 10 HOH *55(H2 O) HELIX 1 1 LEU A 154 TYR A 165 1 12 HELIX 2 2 GLU A 167 SER A 187 1 21 HELIX 3 3 SER A 187 ASN A 202 1 16 HELIX 4 4 TYR A 207 GLN A 258 1 52 HELIX 5 5 GLU A 259 THR A 266 1 8 HELIX 6 6 ARG A 267 VAL A 286 1 20 HELIX 7 7 THR A 287 SER A 311 1 25 HELIX 8 8 SER A 311 PHE A 367 1 57 HELIX 9 9 LYS A 369 SER A 423 1 55 HELIX 10 10 THR A 427 GLU A 470 1 44 HELIX 11 11 SER A 534 LEU A 541 1 8 HELIX 12 12 ASN A 562 LYS A 569 1 8 HELIX 13 13 SER A 583 TYR A 590 1 8 HELIX 14 14 THR A 599 ALA A 610 1 12 HELIX 15 15 ALA A 612 ASN A 618 1 7 HELIX 16 16 GLN A 621 THR A 625 5 5 HELIX 17 17 SER A 635 ASN A 651 1 17 HELIX 18 18 ASP A 665 ASP A 681 1 17 HELIX 19 19 ARG A 691 ASN A 697 1 7 SHEET 1 AA 4 PHE A 510 ILE A 517 0 SHEET 2 AA 4 LEU A 492 PHE A 499 -1 O LEU A 492 N ILE A 517 SHEET 3 AA 4 SER A 548 LEU A 553 -1 O SER A 548 N HIS A 498 SHEET 4 AA 4 HIS A 556 ASP A 557 -1 O HIS A 556 N LEU A 553 SHEET 1 AB 6 ILE A 570 VAL A 573 0 SHEET 2 AB 6 ILE A 654 ASP A 658 1 O ILE A 654 N GLY A 571 SHEET 3 AB 6 THR A 684 ILE A 688 1 O THR A 684 N LEU A 655 SHEET 4 AB 6 VAL A 522 VAL A 526 1 O THR A 523 N VAL A 687 SHEET 5 AB 6 MET A 700 ASP A 705 1 O MET A 700 N ALA A 524 SHEET 6 AB 6 LYS A 708 GLY A 713 -1 O LYS A 708 N ASP A 705 LINK OG SER A 534 MG MG A 801 1555 1555 2.15 LINK OE1 GLN A 575 MG MG A 801 1555 1555 2.24 LINK MG MG A 801 O3G ACP A 900 1555 1555 1.98 LINK MG MG A 801 O2B ACP A 900 1555 1555 2.02 SITE 1 AC1 4 SER A 534 GLN A 575 ASP A 658 ACP A 900 SITE 1 AC2 15 ASP A 264 TYR A 501 ALA A 503 ILE A 509 SITE 2 AC2 15 SER A 529 GLY A 530 SER A 531 GLY A 532 SITE 3 AC2 15 LYS A 533 SER A 534 THR A 535 TYR A 544 SITE 4 AC2 15 GLN A 575 MG A 801 HOH A2055 SITE 1 AC3 3 ARG A 170 TYR A 234 ARG A 242 SITE 1 AC4 12 ASP A 197 TYR A 200 THR A 201 PRO A 203 SITE 2 AC4 12 LEU A 214 GLY A 418 MET A 421 THR A 427 SITE 3 AC4 12 VAL A 428 ASN A 484 LYS A 486 HOH A2033 SITE 1 AC5 7 PRO A 312 ASN A 313 THR A 316 PHE A 317 SITE 2 AC5 7 SER A 405 LYS A 416 LMT A1724 SITE 1 AC6 1 SER A 449 SITE 1 AC7 9 SER A 405 SER A 412 TYR A 415 LYS A 416 SITE 2 AC7 9 LEU A 420 SER A 423 HIS A 425 CDL A1721 SITE 3 AC7 9 HOH A2032 SITE 1 AC8 4 PHE A 191 LEU A 214 PHE A 222 ASN A 407 CRYST1 175.110 175.110 49.550 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005711 0.003297 0.000000 0.00000 SCALE2 0.000000 0.006594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020182 0.00000 CONECT 2884 4243 CONECT 3202 4243 CONECT 4243 2884 3202 4247 4250 CONECT 4244 4245 4246 4247 4251 CONECT 4245 4244 CONECT 4246 4244 CONECT 4247 4243 4244 CONECT 4248 4249 4250 4251 4255 CONECT 4249 4248 CONECT 4250 4243 4248 CONECT 4251 4244 4248 CONECT 4252 4253 4254 4255 4256 CONECT 4253 4252 CONECT 4254 4252 CONECT 4255 4248 4252 CONECT 4256 4252 4257 CONECT 4257 4256 4258 CONECT 4258 4257 4259 4260 CONECT 4259 4258 4264 CONECT 4260 4258 4261 4262 CONECT 4261 4260 CONECT 4262 4260 4263 4264 CONECT 4263 4262 CONECT 4264 4259 4262 4265 CONECT 4265 4264 4266 4274 CONECT 4266 4265 4267 CONECT 4267 4266 4268 CONECT 4268 4267 4269 4274 CONECT 4269 4268 4270 4271 CONECT 4270 4269 CONECT 4271 4269 4272 CONECT 4272 4271 4273 CONECT 4273 4272 4274 CONECT 4274 4265 4268 4273 CONECT 4275 4276 4281 4285 CONECT 4276 4275 4277 4282 CONECT 4277 4276 4278 4283 CONECT 4278 4277 4279 4284 CONECT 4279 4278 4280 4285 CONECT 4280 4279 4286 CONECT 4281 4275 4290 CONECT 4282 4276 CONECT 4283 4277 CONECT 4284 4278 CONECT 4285 4275 4279 CONECT 4286 4280 CONECT 4287 4288 4293 4296 CONECT 4288 4287 4289 4294 CONECT 4289 4288 4290 4295 CONECT 4290 4281 4289 4291 CONECT 4291 4290 4292 4296 CONECT 4292 4291 4297 CONECT 4293 4287 4298 CONECT 4294 4288 CONECT 4295 4289 CONECT 4296 4287 4291 CONECT 4297 4292 CONECT 4298 4293 4299 CONECT 4299 4298 4300 CONECT 4300 4299 4301 CONECT 4301 4300 4302 CONECT 4302 4301 4303 CONECT 4303 4302 4304 CONECT 4304 4303 4305 CONECT 4305 4304 4306 CONECT 4306 4305 4307 CONECT 4307 4306 4308 CONECT 4308 4307 4309 CONECT 4309 4308 CONECT 4310 4311 4312 4348 CONECT 4311 4310 CONECT 4312 4310 4313 CONECT 4313 4312 4314 CONECT 4314 4313 4315 4316 4317 CONECT 4315 4314 CONECT 4316 4314 CONECT 4317 4314 4318 CONECT 4318 4317 4319 CONECT 4319 4318 4320 4327 CONECT 4320 4319 4321 CONECT 4321 4320 4322 4323 CONECT 4322 4321 CONECT 4323 4321 4324 CONECT 4324 4323 4325 CONECT 4325 4324 4326 CONECT 4326 4325 CONECT 4327 4319 4328 CONECT 4328 4327 4329 CONECT 4329 4328 4330 4331 CONECT 4330 4329 CONECT 4331 4329 4332 CONECT 4332 4331 4333 CONECT 4333 4332 4334 CONECT 4334 4333 4335 CONECT 4335 4334 4336 CONECT 4336 4335 4337 CONECT 4337 4336 4338 CONECT 4338 4337 4339 CONECT 4339 4338 4340 CONECT 4340 4339 4341 CONECT 4341 4340 4342 CONECT 4342 4341 4343 CONECT 4343 4342 4344 CONECT 4344 4343 4345 CONECT 4345 4344 4346 CONECT 4346 4345 4347 CONECT 4347 4346 CONECT 4348 4310 4349 CONECT 4349 4348 4350 CONECT 4350 4349 4351 4352 4353 CONECT 4351 4350 CONECT 4352 4350 CONECT 4353 4350 4354 CONECT 4354 4353 4355 CONECT 4355 4354 4356 4363 CONECT 4356 4355 4357 CONECT 4357 4356 4358 4359 CONECT 4358 4357 CONECT 4359 4357 4360 CONECT 4360 4359 4361 CONECT 4361 4360 4362 CONECT 4362 4361 CONECT 4363 4355 4364 CONECT 4364 4363 4365 CONECT 4365 4364 4366 4367 CONECT 4366 4365 CONECT 4367 4365 4368 CONECT 4368 4367 4369 CONECT 4369 4368 4370 CONECT 4370 4369 4371 CONECT 4371 4370 4372 CONECT 4372 4371 4373 CONECT 4373 4372 4374 CONECT 4374 4373 4375 CONECT 4375 4374 4376 CONECT 4376 4375 4377 CONECT 4377 4376 4378 CONECT 4378 4377 4379 CONECT 4379 4378 4380 CONECT 4380 4379 4381 CONECT 4381 4380 4382 CONECT 4382 4381 4383 CONECT 4383 4382 CONECT 4384 4385 CONECT 4385 4384 4386 CONECT 4386 4385 4387 CONECT 4387 4386 4388 CONECT 4388 4387 4389 CONECT 4389 4388 4390 CONECT 4390 4389 4391 CONECT 4391 4390 4392 CONECT 4392 4391 4393 CONECT 4393 4392 4394 CONECT 4394 4393 4395 CONECT 4395 4394 CONECT 4396 4397 4402 4406 CONECT 4397 4396 4398 4403 CONECT 4398 4397 4399 4404 CONECT 4399 4398 4400 4405 CONECT 4400 4399 4401 4406 CONECT 4401 4400 4407 CONECT 4402 4396 4411 CONECT 4403 4397 CONECT 4404 4398 CONECT 4405 4399 CONECT 4406 4396 4400 CONECT 4407 4401 CONECT 4408 4409 4414 4417 CONECT 4409 4408 4410 4415 CONECT 4410 4409 4411 4416 CONECT 4411 4402 4410 4412 CONECT 4412 4411 4413 4417 CONECT 4413 4412 4418 CONECT 4414 4408 4419 CONECT 4415 4409 CONECT 4416 4410 CONECT 4417 4408 4412 CONECT 4418 4413 CONECT 4419 4414 4420 CONECT 4420 4419 4421 CONECT 4421 4420 4422 CONECT 4422 4421 4423 CONECT 4423 4422 4424 CONECT 4424 4423 4425 CONECT 4425 4424 4426 CONECT 4426 4425 4427 CONECT 4427 4426 4428 CONECT 4428 4427 4429 CONECT 4429 4428 4430 CONECT 4430 4429 CONECT 4431 4432 CONECT 4432 4431 4433 CONECT 4433 4432 4434 CONECT 4434 4433 4435 CONECT 4435 4434 4436 CONECT 4436 4435 4437 CONECT 4437 4436 4438 CONECT 4438 4437 4439 CONECT 4439 4438 4440 CONECT 4440 4439 4441 CONECT 4441 4440 4442 CONECT 4442 4441 4443 CONECT 4443 4442 4444 CONECT 4444 4443 4445 CONECT 4445 4444 4446 CONECT 4446 4445 4447 CONECT 4447 4446 4448 CONECT 4448 4447 MASTER 395 0 8 19 10 0 16 6 4493 1 208 46 END