HEADER MEMBRANE PROTEIN 26-JUN-12 4AZL TITLE IN MESO STRUCTURE OF ALGINATE TRANSPORTER, ALGE, FROM PSEUDOMOAS TITLE 2 AERUGINOSA, PAO1, CRYSTAL FORM 2. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALGINATE PRODUCTION PROTEIN ALGE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALGE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 ATCC: 15692; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PET200-D-TOPO; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: ALGE-PET200/D-TOPO; SOURCE 13 OTHER_DETAILS: HOLLOWAY COLLECTION KEYWDS MEMBRANE PROTEIN, OUTER MEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR J.TAN,V.E.PYE,D.ARAGAO,M.CAFFREY REVDAT 7 07-FEB-24 4AZL 1 REMARK REVDAT 6 29-MAR-23 4AZL 1 AUTHOR REMARK LINK REVDAT 5 30-SEP-15 4AZL 1 JRNL REVDAT 4 13-AUG-14 4AZL 1 JRNL REVDAT 3 06-AUG-14 4AZL 1 JRNL REVDAT 2 30-JUL-14 4AZL 1 JRNL REVDAT 1 03-JUL-13 4AZL 0 JRNL AUTH J.TAN,S.L.ROUSE,D.LI,V.E.PYE,L.VOGELEY,A.R.BRINTH, JRNL AUTH 2 T.EL ARNAOUT,J.C.WHITNEY,P.L.HOWELL,M.S.P.SANSOM,M.CAFFREY JRNL TITL A CONFORMATIONAL LANDSCAPE FOR ALGINATE SECRETION ACROSS THE JRNL TITL 2 OUTER MEMBRANE OF PSEUDOMONAS AERUGINOSA. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2054 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25084326 JRNL DOI 10.1107/S1399004714001850 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 23738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1215 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8951 - 5.8205 0.89 2382 136 0.2738 0.2968 REMARK 3 2 5.8205 - 4.6214 0.92 2454 148 0.2083 0.2277 REMARK 3 3 4.6214 - 4.0377 0.93 2509 125 0.1894 0.2176 REMARK 3 4 4.0377 - 3.6687 0.94 2488 152 0.2136 0.2739 REMARK 3 5 3.6687 - 3.4058 0.94 2504 122 0.2188 0.2630 REMARK 3 6 3.4058 - 3.2051 0.95 2558 125 0.2336 0.2752 REMARK 3 7 3.2051 - 3.0446 0.95 2521 135 0.2805 0.3620 REMARK 3 8 3.0446 - 2.9121 0.95 2551 151 0.3077 0.3937 REMARK 3 9 2.9121 - 2.8000 0.95 2556 121 0.3225 0.3654 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 14.25 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.36520 REMARK 3 B22 (A**2) : 5.20820 REMARK 3 B33 (A**2) : -1.84290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.61680 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7048 REMARK 3 ANGLE : 1.218 9488 REMARK 3 CHIRALITY : 0.085 952 REMARK 3 PLANARITY : 0.005 1252 REMARK 3 DIHEDRAL : 15.279 2555 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND RESSEQ 41:70 OR CHAIN A AND REMARK 3 RESSEQ 72:98 OR CHAIN A AND RESSEQ 104: REMARK 3 231 OR CHAIN A AND RESSEQ 240:264 OR REMARK 3 CHAIN A AND RESSEQ 269:297 OR CHAIN A AND REMARK 3 RESSEQ 306:318 OR CHAIN A AND RESSEQ 323: REMARK 3 333 OR CHAIN A AND RESSEQ 343:388 OR REMARK 3 CHAIN A AND RESSEQ 390:408 OR CHAIN A AND REMARK 3 RESSEQ 416: 438 OR CHAIN A AND RESSEQ 456: REMARK 3 464 OR CHAIN A AND RESSEQ 469:470 OR REMARK 3 CHAIN A AND RESSEQ 476:498 REMARK 3 SELECTION : CHAIN B AND RESSEQ 41:70 OR CHAIN B AND REMARK 3 RESSEQ 72:98 OR CHAIN B AND RESSEQ 104: REMARK 3 231 OR CHAIN B AND RESSEQ 240:264 OR REMARK 3 CHAIN B AND RESSEQ 269:297 OR CHAIN B AND REMARK 3 RESSEQ 306:318 OR CHAIN B AND RESSEQ 323: REMARK 3 333 OR CHAIN B AND RESSEQ 343:388 OR REMARK 3 CHAIN B AND RESSEQ 390:408 OR CHAIN B AND REMARK 3 RESSEQ 416: 438 OR CHAIN B AND RESSEQ 456: REMARK 3 464 OR CHAIN B AND RESSEQ 469:470 OR REMARK 3 CHAIN B AND RESSEQ 476:498 REMARK 3 ATOM PAIRS NUMBER : 2774 REMARK 3 RMSD : 0.014 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4AZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1290053066. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23738 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 44.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.22000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.91000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3RBH REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE, PH 6.5, 1.2 M REMARK 280 SODIUM ACETATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 122.88000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 33 REMARK 465 ASN A 34 REMARK 465 SER A 35 REMARK 465 GLY A 36 REMARK 465 GLU A 37 REMARK 465 ALA A 38 REMARK 465 PRO A 39 REMARK 465 GLY A 63 REMARK 465 GLY A 64 REMARK 465 LEU A 104 REMARK 465 GLN A 105 REMARK 465 SER A 106 REMARK 465 ASP A 107 REMARK 465 THR A 108 REMARK 465 ASP A 109 REMARK 465 ASP A 110 REMARK 465 GLY A 111 REMARK 465 ASN A 112 REMARK 465 ASN A 113 REMARK 465 SER A 114 REMARK 465 ARG A 115 REMARK 465 ASN A 116 REMARK 465 ASP A 117 REMARK 465 GLY A 118 REMARK 465 ARG A 119 REMARK 465 GLU A 120 REMARK 465 GLU A 240 REMARK 465 VAL A 241 REMARK 465 ASP A 242 REMARK 465 ASN A 243 REMARK 465 LEU A 244 REMARK 465 ASP A 245 REMARK 465 LYS A 246 REMARK 465 THR A 291 REMARK 465 THR A 292 REMARK 465 VAL A 293 REMARK 465 ASP A 294 REMARK 465 ASP A 295 REMARK 465 ARG A 296 REMARK 465 ARG A 297 REMARK 465 ALA B 33 REMARK 465 ASN B 34 REMARK 465 SER B 35 REMARK 465 GLY B 36 REMARK 465 GLU B 37 REMARK 465 ALA B 38 REMARK 465 GLY B 63 REMARK 465 GLY B 64 REMARK 465 GLN B 105 REMARK 465 SER B 106 REMARK 465 ASP B 107 REMARK 465 THR B 108 REMARK 465 ASP B 109 REMARK 465 ASP B 110 REMARK 465 GLY B 111 REMARK 465 ASN B 112 REMARK 465 ASN B 113 REMARK 465 SER B 114 REMARK 465 ARG B 115 REMARK 465 ASN B 116 REMARK 465 ASP B 117 REMARK 465 GLY B 118 REMARK 465 ARG B 119 REMARK 465 ASP B 242 REMARK 465 ASN B 243 REMARK 465 LEU B 244 REMARK 465 THR B 291 REMARK 465 THR B 292 REMARK 465 VAL B 293 REMARK 465 ASP B 294 REMARK 465 ASP B 295 REMARK 465 ARG B 296 REMARK 465 ARG B 297 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 68 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 PRO A 473 C - N - CA ANGL. DEV. = 10.5 DEGREES REMARK 500 LEU B 104 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 PRO B 473 C - N - CA ANGL. DEV. = 10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 54 111.58 -170.46 REMARK 500 ASN A 67 85.20 -153.73 REMARK 500 ASP A 162 80.83 -162.84 REMARK 500 ASP A 321 -159.12 -149.80 REMARK 500 ASN A 355 39.31 -85.03 REMARK 500 ARG A 389 -130.37 45.81 REMARK 500 ASN A 416 78.64 -109.05 REMARK 500 SER A 455 -171.62 -177.13 REMARK 500 ASN B 54 111.66 -170.53 REMARK 500 ASN B 67 84.78 -153.87 REMARK 500 ASP B 162 80.71 -162.88 REMARK 500 ASP B 321 -158.15 -151.03 REMARK 500 ASN B 355 39.21 -85.20 REMARK 500 ARG B 389 -128.67 43.05 REMARK 500 ASN B 416 78.88 -108.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 (2RS)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE (78M/78N) REMARK 600 ALKANE CHAINS WERE MODELLED AS 78M, BUT COULD POSSIBLY BE REMARK 600 OTHER DETERGENT. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 78M A 1491 REMARK 610 78M A 1492 REMARK 610 78M A 1493 REMARK 610 78M B 1491 REMARK 610 78M B 1492 REMARK 610 78M B 1493 REMARK 610 78M B 1494 REMARK 610 78M B 1495 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1494 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 55 OD1 REMARK 620 2 ASP A 55 OD2 40.4 REMARK 620 3 ASP A 57 OD2 71.6 97.1 REMARK 620 4 ALA A 61 O 118.7 105.1 65.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1496 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 55 OD2 REMARK 620 2 ALA B 61 O 114.2 REMARK 620 N 1 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 18-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 19-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "BA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 18-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 19-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M A 1491 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M A 1492 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M A 1493 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1494 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78N A 1495 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78N A 1496 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78N A 1497 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M B 1491 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M B 1492 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M B 1493 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M B 1494 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M B 1495 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1496 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M B 1497 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M B 1498 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AFK RELATED DB: PDB REMARK 900 IN MESO STRUCTURE OF ALGINATE TRANSPORTER, ALGE, FROM PSEUDOMONAS REMARK 900 AERUGINOSA, PAO1 DBREF 4AZL A 33 490 UNP P18895 ALGE_PSEAE 33 490 DBREF 4AZL B 33 490 UNP P18895 ALGE_PSEAE 33 490 SEQRES 1 A 458 ALA ASN SER GLY GLU ALA PRO LYS ASN PHE GLY LEU ASP SEQRES 2 A 458 VAL LYS ILE THR GLY GLU SER GLU ASN ASP ARG ASP LEU SEQRES 3 A 458 GLY THR ALA PRO GLY GLY THR LEU ASN ASP ILE GLY ILE SEQRES 4 A 458 ASP LEU ARG PRO TRP ALA PHE GLY GLN TRP GLY ASP TRP SEQRES 5 A 458 SER ALA TYR PHE MET GLY GLN ALA VAL ALA ALA THR ASP SEQRES 6 A 458 THR ILE GLU THR ASP THR LEU GLN SER ASP THR ASP ASP SEQRES 7 A 458 GLY ASN ASN SER ARG ASN ASP GLY ARG GLU PRO ASP LYS SEQRES 8 A 458 SER TYR LEU ALA ALA ARG GLU PHE TRP VAL ASP TYR ALA SEQRES 9 A 458 GLY LEU THR ALA TYR PRO GLY GLU HIS LEU ARG PHE GLY SEQRES 10 A 458 ARG GLN ARG LEU ARG GLU ASP SER GLY GLN TRP GLN ASP SEQRES 11 A 458 THR ASN ILE GLU ALA LEU ASN TRP SER PHE GLU THR THR SEQRES 12 A 458 LEU LEU ASN ALA HIS ALA GLY VAL ALA GLN ARG PHE SER SEQRES 13 A 458 GLU TYR ARG THR ASP LEU ASP GLU LEU ALA PRO GLU ASP SEQRES 14 A 458 LYS ASP ARG THR HIS VAL PHE GLY ASP ILE SER THR GLN SEQRES 15 A 458 TRP ALA PRO HIS HIS ARG ILE GLY VAL ARG ILE HIS HIS SEQRES 16 A 458 ALA ASP ASP SER GLY HIS LEU ARG ARG PRO GLY GLU GLU SEQRES 17 A 458 VAL ASP ASN LEU ASP LYS THR TYR THR GLY GLN LEU THR SEQRES 18 A 458 TRP LEU GLY ILE GLU ALA THR GLY ASP ALA TYR ASN TYR SEQRES 19 A 458 ARG SER SER MET PRO LEU ASN TYR TRP ALA SER ALA THR SEQRES 20 A 458 TRP LEU THR GLY ASP ARG ASP ASN LEU THR THR THR THR SEQRES 21 A 458 VAL ASP ASP ARG ARG ILE ALA THR GLY LYS GLN SER GLY SEQRES 22 A 458 ASP VAL ASN ALA PHE GLY VAL ASP LEU GLY LEU ARG TRP SEQRES 23 A 458 ASN ILE ASP GLU GLN TRP LYS ALA GLY VAL GLY TYR ALA SEQRES 24 A 458 ARG GLY SER GLY GLY GLY LYS ASP GLY GLU GLU GLN PHE SEQRES 25 A 458 GLN GLN THR GLY LEU GLU SER ASN ARG SER ASN PHE THR SEQRES 26 A 458 GLY THR ARG SER ARG VAL HIS ARG PHE GLY GLU ALA PHE SEQRES 27 A 458 ARG GLY GLU LEU SER ASN LEU GLN ALA ALA THR LEU PHE SEQRES 28 A 458 GLY SER TRP GLN LEU ARG GLU ASP TYR ASP ALA SER LEU SEQRES 29 A 458 VAL TYR HIS LYS PHE TRP ARG VAL ASP ASP ASP SER ASP SEQRES 30 A 458 ILE GLY THR SER GLY ILE ASN ALA ALA LEU GLN PRO GLY SEQRES 31 A 458 GLU LYS ASP ILE GLY GLN GLU LEU ASP LEU VAL VAL THR SEQRES 32 A 458 LYS TYR PHE LYS GLN GLY LEU LEU PRO ALA SER MET SER SEQRES 33 A 458 GLN TYR VAL ASP GLU PRO SER ALA LEU ILE ARG PHE ARG SEQRES 34 A 458 GLY GLY LEU PHE LYS PRO GLY ASP ALA TYR GLY PRO GLY SEQRES 35 A 458 THR ASP SER THR MET HIS ARG ALA PHE VAL ASP PHE ILE SEQRES 36 A 458 TRP ARG PHE SEQRES 1 B 458 ALA ASN SER GLY GLU ALA PRO LYS ASN PHE GLY LEU ASP SEQRES 2 B 458 VAL LYS ILE THR GLY GLU SER GLU ASN ASP ARG ASP LEU SEQRES 3 B 458 GLY THR ALA PRO GLY GLY THR LEU ASN ASP ILE GLY ILE SEQRES 4 B 458 ASP LEU ARG PRO TRP ALA PHE GLY GLN TRP GLY ASP TRP SEQRES 5 B 458 SER ALA TYR PHE MET GLY GLN ALA VAL ALA ALA THR ASP SEQRES 6 B 458 THR ILE GLU THR ASP THR LEU GLN SER ASP THR ASP ASP SEQRES 7 B 458 GLY ASN ASN SER ARG ASN ASP GLY ARG GLU PRO ASP LYS SEQRES 8 B 458 SER TYR LEU ALA ALA ARG GLU PHE TRP VAL ASP TYR ALA SEQRES 9 B 458 GLY LEU THR ALA TYR PRO GLY GLU HIS LEU ARG PHE GLY SEQRES 10 B 458 ARG GLN ARG LEU ARG GLU ASP SER GLY GLN TRP GLN ASP SEQRES 11 B 458 THR ASN ILE GLU ALA LEU ASN TRP SER PHE GLU THR THR SEQRES 12 B 458 LEU LEU ASN ALA HIS ALA GLY VAL ALA GLN ARG PHE SER SEQRES 13 B 458 GLU TYR ARG THR ASP LEU ASP GLU LEU ALA PRO GLU ASP SEQRES 14 B 458 LYS ASP ARG THR HIS VAL PHE GLY ASP ILE SER THR GLN SEQRES 15 B 458 TRP ALA PRO HIS HIS ARG ILE GLY VAL ARG ILE HIS HIS SEQRES 16 B 458 ALA ASP ASP SER GLY HIS LEU ARG ARG PRO GLY GLU GLU SEQRES 17 B 458 VAL ASP ASN LEU ASP LYS THR TYR THR GLY GLN LEU THR SEQRES 18 B 458 TRP LEU GLY ILE GLU ALA THR GLY ASP ALA TYR ASN TYR SEQRES 19 B 458 ARG SER SER MET PRO LEU ASN TYR TRP ALA SER ALA THR SEQRES 20 B 458 TRP LEU THR GLY ASP ARG ASP ASN LEU THR THR THR THR SEQRES 21 B 458 VAL ASP ASP ARG ARG ILE ALA THR GLY LYS GLN SER GLY SEQRES 22 B 458 ASP VAL ASN ALA PHE GLY VAL ASP LEU GLY LEU ARG TRP SEQRES 23 B 458 ASN ILE ASP GLU GLN TRP LYS ALA GLY VAL GLY TYR ALA SEQRES 24 B 458 ARG GLY SER GLY GLY GLY LYS ASP GLY GLU GLU GLN PHE SEQRES 25 B 458 GLN GLN THR GLY LEU GLU SER ASN ARG SER ASN PHE THR SEQRES 26 B 458 GLY THR ARG SER ARG VAL HIS ARG PHE GLY GLU ALA PHE SEQRES 27 B 458 ARG GLY GLU LEU SER ASN LEU GLN ALA ALA THR LEU PHE SEQRES 28 B 458 GLY SER TRP GLN LEU ARG GLU ASP TYR ASP ALA SER LEU SEQRES 29 B 458 VAL TYR HIS LYS PHE TRP ARG VAL ASP ASP ASP SER ASP SEQRES 30 B 458 ILE GLY THR SER GLY ILE ASN ALA ALA LEU GLN PRO GLY SEQRES 31 B 458 GLU LYS ASP ILE GLY GLN GLU LEU ASP LEU VAL VAL THR SEQRES 32 B 458 LYS TYR PHE LYS GLN GLY LEU LEU PRO ALA SER MET SER SEQRES 33 B 458 GLN TYR VAL ASP GLU PRO SER ALA LEU ILE ARG PHE ARG SEQRES 34 B 458 GLY GLY LEU PHE LYS PRO GLY ASP ALA TYR GLY PRO GLY SEQRES 35 B 458 THR ASP SER THR MET HIS ARG ALA PHE VAL ASP PHE ILE SEQRES 36 B 458 TRP ARG PHE HET 78M A1491 8 HET 78M A1492 11 HET 78M A1493 13 HET CA A1494 1 HET 78N A1495 22 HET 78N A1496 22 HET 78N A1497 22 HET 78M B1491 9 HET 78M B1492 8 HET 78M B1493 11 HET 78M B1494 7 HET 78M B1495 12 HET CA B1496 1 HET 78M B1497 22 HET 78M B1498 22 HETNAM 78M (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE HETNAM CA CALCIUM ION HETNAM 78N (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE HETSYN 78M 7.8 MONOACYLGLYCEROL HETSYN 78N 7.8 MONOACYLGLYCEROL (2R) FORMUL 3 78M 10(C18 H34 O4) FORMUL 6 CA 2(CA 2+) FORMUL 7 78N 3(C18 H34 O4) FORMUL 18 HOH *49(H2 O) HELIX 1 1 GLY A 337 GLU A 341 5 5 HELIX 2 2 GLY B 337 GLU B 341 5 5 SHEET 1 AA19 PHE A 42 ASN A 54 0 SHEET 2 AA19 LEU A 66 TRP A 81 -1 O LEU A 66 N GLU A 53 SHEET 3 AA19 TRP A 84 ALA A 95 -1 O TRP A 84 N TRP A 81 SHEET 4 AA19 SER A 124 TYR A 135 -1 O TYR A 125 N VAL A 93 SHEET 5 AA19 GLU A 144 ARG A 154 -1 O LEU A 146 N TYR A 135 SHEET 6 AA19 ASP A 162 GLU A 173 -1 O THR A 163 N LEU A 153 SHEET 7 AA19 LEU A 177 GLN A 185 -1 O ALA A 179 N PHE A 172 SHEET 8 AA19 ARG A 204 ALA A 216 -1 O HIS A 206 N ALA A 184 SHEET 9 AA19 HIS A 219 ASP A 230 -1 O HIS A 219 N ALA A 216 SHEET 10 AA19 TYR A 248 GLY A 261 -1 O GLY A 250 N ASP A 230 SHEET 11 AA19 LEU A 272 THR A 289 -1 O TYR A 274 N GLY A 261 SHEET 12 AA19 GLY A 301 ASN A 319 -1 O GLY A 301 N THR A 289 SHEET 13 AA19 TRP A 324 GLY A 333 -1 O ALA A 326 N TRP A 318 SHEET 14 AA19 LEU A 377 LEU A 388 -1 O LEU A 377 N GLY A 333 SHEET 15 AA19 TYR A 392 ARG A 403 -1 O TYR A 392 N LEU A 388 SHEET 16 AA19 ASP A 425 TYR A 437 -1 O GLY A 427 N PHE A 401 SHEET 17 AA19 LEU A 457 PRO A 467 -1 O ILE A 458 N LYS A 436 SHEET 18 AA19 MET A 479 ARG A 489 -1 O MET A 479 N PHE A 465 SHEET 19 AA19 PHE A 42 ASN A 54 -1 O VAL A 46 N TRP A 488 SHEET 1 AB 2 ARG A 353 SER A 354 0 SHEET 2 AB 2 VAL A 363 HIS A 364 -1 O VAL A 363 N SER A 354 SHEET 1 BA19 PHE B 42 ASN B 54 0 SHEET 2 BA19 LEU B 66 TRP B 81 -1 O LEU B 66 N GLU B 53 SHEET 3 BA19 TRP B 84 ALA B 95 -1 O TRP B 84 N TRP B 81 SHEET 4 BA19 SER B 124 TYR B 135 -1 O TYR B 125 N VAL B 93 SHEET 5 BA19 GLU B 144 ARG B 154 -1 O LEU B 146 N TYR B 135 SHEET 6 BA19 ASP B 162 GLU B 173 -1 O THR B 163 N LEU B 153 SHEET 7 BA19 LEU B 177 GLN B 185 -1 O ALA B 179 N PHE B 172 SHEET 8 BA19 ARG B 204 ALA B 216 -1 O HIS B 206 N ALA B 184 SHEET 9 BA19 HIS B 219 ASP B 230 -1 O HIS B 219 N ALA B 216 SHEET 10 BA19 TYR B 248 GLY B 261 -1 O GLY B 250 N ASP B 230 SHEET 11 BA19 LEU B 272 THR B 289 -1 O TYR B 274 N GLY B 261 SHEET 12 BA19 GLY B 301 ASN B 319 -1 O GLY B 301 N THR B 289 SHEET 13 BA19 TRP B 324 GLY B 333 -1 O ALA B 326 N TRP B 318 SHEET 14 BA19 LEU B 377 LEU B 388 -1 O LEU B 377 N GLY B 333 SHEET 15 BA19 TYR B 392 ARG B 403 -1 O TYR B 392 N LEU B 388 SHEET 16 BA19 ASP B 425 TYR B 437 -1 O GLY B 427 N PHE B 401 SHEET 17 BA19 LEU B 457 PRO B 467 -1 O ILE B 458 N LYS B 436 SHEET 18 BA19 MET B 479 ARG B 489 -1 O MET B 479 N PHE B 465 SHEET 19 BA19 PHE B 42 ASN B 54 -1 O VAL B 46 N TRP B 488 SHEET 1 BB 2 ARG B 353 SER B 354 0 SHEET 2 BB 2 VAL B 363 HIS B 364 -1 O VAL B 363 N SER B 354 LINK OD1 ASP A 55 CA CA A1494 1555 1555 3.20 LINK OD2 ASP A 55 CA CA A1494 1555 1555 3.13 LINK OD2 ASP A 57 CA CA A1494 1555 1555 3.11 LINK O ALA A 61 CA CA A1494 1555 1555 3.12 LINK OD2 ASP B 55 CA CA B1496 1555 1555 2.99 LINK O ALA B 61 CA CA B1496 1555 1555 2.95 CISPEP 1 ASN A 54 ASP A 55 0 -1.05 CISPEP 2 PRO B 39 LYS B 40 0 -24.52 CISPEP 3 ASN B 54 ASP B 55 0 -0.95 SITE 1 AC1 2 PHE A 148 GLU A 166 SITE 1 AC2 6 PHE A 42 GLY A 43 PRO A 75 TRP A 318 SITE 2 AC2 6 ALA A 326 PHE A 490 SITE 1 AC3 4 GLY A 50 ASN A 67 ASP A 68 ALA A 482 SITE 1 AC4 4 ASP A 55 ASP A 57 ALA A 61 PRO A 62 SITE 1 AC5 6 ASN A 54 LEU A 430 LEU A 432 LEU A 464 SITE 2 AC5 6 THR A 478 HIS A 480 SITE 1 AC6 8 TRP A 81 ALA A 86 TYR A 87 PHE A 88 SITE 2 AC6 8 TRP A 132 PHE A 148 LEU A 272 TYR A 274 SITE 1 AC7 5 TYR A 190 GLY A 315 TYR A 330 ARG A 332 SITE 2 AC7 5 GLN A 378 SITE 1 AC8 5 PHE B 42 PRO B 75 TRP B 318 ALA B 326 SITE 2 AC8 5 GLY B 327 SITE 1 AC9 3 ALA B 92 VAL B 93 SER B 124 SITE 1 BC1 4 PHE B 148 GLU B 166 GLN B 185 THR B 205 SITE 1 BC2 3 TYR B 392 VAL B 434 PHE B 460 SITE 1 BC3 6 PRO B 75 GLN B 91 ALA B 92 ALA B 127 SITE 2 BC3 6 THR B 192 78M B1497 SITE 1 BC4 4 ASP B 55 ASP B 57 ALA B 61 PRO B 62 SITE 1 BC5 8 SER B 188 TYR B 274 GLY B 315 LEU B 316 SITE 2 BC5 8 VAL B 328 TYR B 330 GLN B 378 78M B1495 SITE 1 BC6 10 ASN B 41 GLY B 79 TRP B 81 ALA B 86 SITE 2 BC6 10 TYR B 87 PHE B 88 HIS B 219 PRO B 271 SITE 3 BC6 10 LEU B 272 TYR B 274 CRYST1 47.090 245.760 47.130 90.00 104.36 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021236 0.000000 0.005437 0.00000 SCALE2 0.000000 0.004069 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021902 0.00000 MTRIX1 1 0.200600 -0.976700 0.076590 28.04000 1 MTRIX2 1 -0.013350 0.075450 0.997100 82.80000 1 MTRIX3 1 -0.979600 -0.201100 0.002101 -34.78000 1