HEADER TRANSFERASE 29-JUN-12 4B08 TITLE CRYSTAL STRUCTURE OF YEAST DNA POLYMERASE ALPHA, SELENOMETHIONINE TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE ALPHA CATALYTIC SUBUNIT A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: POLYMERASE DOMAIN, RESIDUES 349-1258; COMPND 5 SYNONYM: DNA POLYMERASE I SUBUNIT A, DNA POLYMERASE ALPHA\:PRIMASE COMPND 6 COMPLEX P180 SUBUNIT, DNA POLYMERASE-PRIMASE COMPLEX P180 SUBUNIT, COMPND 7 POL ALPHA-PRIMASE COMPLEX P180 SUBUNIT; COMPND 8 EC: 2.7.7.7; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: SELENOMETHIONINE PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 KEYWDS TRANSFERASE, DNA POLYMERASE, DNA REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR R.L.PERERA,R.TORELLA,S.KLINGE,M.L.KILKENNY,J.D.MAMAN,L.PELLEGRINI REVDAT 3 01-MAY-13 4B08 1 JRNL REVDAT 2 17-APR-13 4B08 1 JRNL REVDAT 1 27-FEB-13 4B08 0 JRNL AUTH R.L.PERERA,R.TORELLA,S.KLINGE,M.L.KILKENNY,J.D.MAMAN, JRNL AUTH 2 L.PELLEGRINI JRNL TITL MECHANISM FOR PRIMING DNA SYNTHESIS BY YEAST DNA POLYMERASE JRNL TITL 2 ALPHA JRNL REF ELIFE V. 2 482 2013 JRNL REFN ISSN 2050-084X JRNL PMID 23599895 JRNL DOI 10.7554/ELIFE.00482 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1078) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.8 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.35 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.86 REMARK 3 NUMBER OF REFLECTIONS : 39564 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.1972 REMARK 3 R VALUE (WORKING SET) : 0.1952 REMARK 3 FREE R VALUE : 0.2340 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 1986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.8234 - 6.4242 1.00 2837 179 0.2056 0.2127 REMARK 3 2 6.4242 - 5.0997 1.00 2772 137 0.2009 0.2251 REMARK 3 3 5.0997 - 4.4552 1.00 2716 141 0.1529 0.1831 REMARK 3 4 4.4552 - 4.0479 1.00 2674 158 0.1622 0.1961 REMARK 3 5 4.0479 - 3.7578 1.00 2687 139 0.1852 0.1868 REMARK 3 6 3.7578 - 3.5363 1.00 2664 142 0.1926 0.2637 REMARK 3 7 3.5363 - 3.3592 1.00 2686 118 0.2036 0.2644 REMARK 3 8 3.3592 - 3.2130 1.00 2685 124 0.2204 0.2964 REMARK 3 9 3.2130 - 3.0893 1.00 2655 156 0.2176 0.2915 REMARK 3 10 3.0893 - 2.9827 1.00 2662 132 0.2158 0.2740 REMARK 3 11 2.9827 - 2.8894 1.00 2674 117 0.2142 0.2781 REMARK 3 12 2.8894 - 2.8068 1.00 2657 149 0.2208 0.3060 REMARK 3 13 2.8068 - 2.7329 1.00 2622 139 0.2203 0.2942 REMARK 3 14 2.7329 - 2.6663 0.99 2587 155 0.2429 0.2922 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 GRID STEP FACTOR : 4.00 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.28 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.75 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6413 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 224 REMARK 3 SOLVENT ATOMS : 110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6760 REMARK 3 ANGLE : 0.573 9143 REMARK 3 CHIRALITY : 0.036 1041 REMARK 3 PLANARITY : 0.002 1181 REMARK 3 DIHEDRAL : 12.311 2607 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: FOR REFINEMENT, REFMAC, BUSTER REMARK 3 AND PHENIX WERE USED. RESIDUES 677-679, 816-847, 1056-1062 REMARK 3 1176-1185 AND 1129-1258 ARE DISORDERED AND NOT INCLUDED IN REMARK 3 THE STRUCTURE. THE STRUCTURE WAS REFINED WITH RIDING HYDROGEN REMARK 3 THE HYDROGENS OF THE LAST REFINEMENT RUN ARE INCLUDED. REMARK 4 REMARK 4 4B08 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUN-12. REMARK 100 THE PDBE ID CODE IS EBI-53112. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 315R) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39626 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.67 REMARK 200 RESOLUTION RANGE LOW (A) : 73.97 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.7 REMARK 200 R MERGE (I) : 0.13 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.90 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 17.2 REMARK 200 R MERGE FOR SHELL (I) : 0.66 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.60 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE PH 8.0-9.4, 6-10% REMARK 280 PEG 8000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.72350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.03800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.72350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.03800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 676 REMARK 465 ARG A 677 REMARK 465 GLY A 678 REMARK 465 ASN A 679 REMARK 465 GLU A 816 REMARK 465 GLY A 817 REMARK 465 ASN A 818 REMARK 465 ARG A 819 REMARK 465 SER A 820 REMARK 465 ARG A 821 REMARK 465 ALA A 822 REMARK 465 GLN A 823 REMARK 465 LYS A 824 REMARK 465 GLN A 825 REMARK 465 ARG A 826 REMARK 465 GLN A 827 REMARK 465 ASN A 828 REMARK 465 GLU A 829 REMARK 465 GLU A 830 REMARK 465 ASN A 831 REMARK 465 ALA A 832 REMARK 465 ASP A 833 REMARK 465 ALA A 834 REMARK 465 PRO A 835 REMARK 465 VAL A 836 REMARK 465 ASN A 837 REMARK 465 SER A 838 REMARK 465 LYS A 839 REMARK 465 LYS A 840 REMARK 465 ALA A 841 REMARK 465 LYS A 842 REMARK 465 TYR A 843 REMARK 465 GLN A 844 REMARK 465 GLY A 845 REMARK 465 GLY A 846 REMARK 465 LEU A 847 REMARK 465 LEU A 1056 REMARK 465 ASP A 1057 REMARK 465 LYS A 1058 REMARK 465 ASN A 1059 REMARK 465 GLY A 1060 REMARK 465 ASN A 1061 REMARK 465 GLY A 1062 REMARK 465 ASP A 1176 REMARK 465 GLU A 1177 REMARK 465 ILE A 1178 REMARK 465 ASP A 1179 REMARK 465 ASN A 1180 REMARK 465 ALA A 1181 REMARK 465 ALA A 1182 REMARK 465 ASP A 1183 REMARK 465 THR A 1184 REMARK 465 PRO A 1185 REMARK 465 ILE A 1229 REMARK 465 ASP A 1230 REMARK 465 SER A 1231 REMARK 465 PHE A 1232 REMARK 465 ASN A 1233 REMARK 465 VAL A 1234 REMARK 465 VAL A 1235 REMARK 465 ARG A 1236 REMARK 465 LEU A 1237 REMARK 465 SER A 1238 REMARK 465 GLU A 1239 REMARK 465 ALA A 1240 REMARK 465 LEU A 1241 REMARK 465 GLY A 1242 REMARK 465 LEU A 1243 REMARK 465 ASP A 1244 REMARK 465 SER A 1245 REMARK 465 LYS A 1246 REMARK 465 LYS A 1247 REMARK 465 TYR A 1248 REMARK 465 PHE A 1249 REMARK 465 ARG A 1250 REMARK 465 ARG A 1251 REMARK 465 GLU A 1252 REMARK 465 GLY A 1253 REMARK 465 GLY A 1254 REMARK 465 ASN A 1255 REMARK 465 ASN A 1256 REMARK 465 ASN A 1257 REMARK 465 GLY A 1258 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 377 16.97 59.01 REMARK 500 SER A 433 30.50 -149.18 REMARK 500 PHE A 434 -157.25 -111.83 REMARK 500 ASP A 438 38.72 -86.43 REMARK 500 SER A 457 55.45 38.25 REMARK 500 ASP A 465 46.73 -100.20 REMARK 500 MSE A 492 74.05 -111.91 REMARK 500 ASN A 566 52.35 -140.40 REMARK 500 GLN A 590 -70.94 -120.56 REMARK 500 VAL A 643 -70.34 -133.55 REMARK 500 MSE A 682 31.49 -95.78 REMARK 500 ASN A 783 -156.61 -94.58 REMARK 500 ASN A 958 30.53 -93.18 REMARK 500 ASP A1072 91.43 -67.14 REMARK 500 LYS A1074 51.96 -90.78 REMARK 500 ASP A1096 45.24 -90.32 REMARK 500 MSE A1131 118.13 -162.42 REMARK 500 GLU A1215 -68.98 -92.11 REMARK 500 LEU A1226 66.10 -109.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4FVM RELATED DB: PDB REMARK 900 RELATED ID: 4FXD RELATED DB: PDB REMARK 900 RELATED ID: 4FYD RELATED DB: PDB DBREF 4B08 A 349 1258 UNP P13382 DPOA_YEAST 349 1258 SEQRES 1 A 910 THR ASP THR PHE GLN MSE PHE TRP LEU ASP TYR CYS GLU SEQRES 2 A 910 VAL ASN ASN THR LEU ILE LEU PHE GLY LYS VAL LYS LEU SEQRES 3 A 910 LYS ASP ASP ASN CYS VAL SER ALA MSE VAL GLN ILE ASN SEQRES 4 A 910 GLY LEU CYS ARG GLU LEU PHE PHE LEU PRO ARG GLU GLY SEQRES 5 A 910 LYS THR PRO THR ASP ILE HIS GLU GLU ILE ILE PRO LEU SEQRES 6 A 910 LEU MSE ASP LYS TYR GLY LEU ASP ASN ILE ARG ALA LYS SEQRES 7 A 910 PRO GLN LYS MSE LYS TYR SER PHE GLU LEU PRO ASP ILE SEQRES 8 A 910 PRO SER GLU SER ASP TYR LEU LYS VAL LEU LEU PRO TYR SEQRES 9 A 910 GLN THR PRO LYS SER SER ARG ASP THR ILE PRO SER ASP SEQRES 10 A 910 LEU SER SER ASP THR PHE TYR HIS VAL PHE GLY GLY ASN SEQRES 11 A 910 SER ASN ILE PHE GLU SER PHE VAL ILE GLN ASN ARG ILE SEQRES 12 A 910 MSE GLY PRO CYS TRP LEU ASP ILE LYS GLY ALA ASP PHE SEQRES 13 A 910 ASN SER ILE ARG ASN ALA SER HIS CYS ALA VAL GLU VAL SEQRES 14 A 910 SER VAL ASP LYS PRO GLN ASN ILE THR PRO THR THR THR SEQRES 15 A 910 LYS THR MSE PRO ASN LEU ARG CYS LEU SER LEU SER ILE SEQRES 16 A 910 GLN THR LEU MSE ASN PRO LYS GLU ASN LYS GLN GLU ILE SEQRES 17 A 910 VAL SER ILE THR LEU SER ALA TYR ARG ASN ILE SER LEU SEQRES 18 A 910 ASP SER PRO ILE PRO GLU ASN ILE LYS PRO ASP ASP LEU SEQRES 19 A 910 CYS THR LEU VAL ARG PRO PRO GLN SER THR SER PHE PRO SEQRES 20 A 910 LEU GLY LEU ALA ALA LEU ALA LYS GLN LYS LEU PRO GLY SEQRES 21 A 910 ARG VAL ARG LEU PHE ASN ASN GLU LYS ALA MSE LEU SER SEQRES 22 A 910 CYS PHE CYS ALA MSE LEU LYS VAL GLU ASP PRO ASP VAL SEQRES 23 A 910 ILE ILE GLY HIS ARG LEU GLN ASN VAL TYR LEU ASP VAL SEQRES 24 A 910 LEU ALA HIS ARG MSE HIS ASP LEU ASN ILE PRO THR PHE SEQRES 25 A 910 SER SER ILE GLY ARG ARG LEU ARG ARG THR TRP PRO GLU SEQRES 26 A 910 LYS PHE GLY ARG GLY ASN SER ASN MSE ASN HIS PHE PHE SEQRES 27 A 910 ILE SER ASP ILE CYS SER GLY ARG LEU ILE CYS ASP ILE SEQRES 28 A 910 ALA ASN GLU MSE GLY GLN SER LEU THR PRO LYS CYS GLN SEQRES 29 A 910 SER TRP ASP LEU SER GLU MSE TYR GLN VAL THR CYS GLU SEQRES 30 A 910 LYS GLU HIS LYS PRO LEU ASP ILE ASP TYR GLN ASN PRO SEQRES 31 A 910 GLN TYR GLN ASN ASP VAL ASN SER MSE THR MSE ALA LEU SEQRES 32 A 910 GLN GLU ASN ILE THR ASN CYS MSE ILE SER ALA GLU VAL SEQRES 33 A 910 SER TYR ARG ILE GLN LEU LEU THR LEU THR LYS GLN LEU SEQRES 34 A 910 THR ASN LEU ALA GLY ASN ALA TRP ALA GLN THR LEU GLY SEQRES 35 A 910 GLY THR ARG ALA GLY ARG ASN GLU TYR ILE LEU LEU HIS SEQRES 36 A 910 GLU PHE SER ARG ASN GLY PHE ILE VAL PRO ASP LYS GLU SEQRES 37 A 910 GLY ASN ARG SER ARG ALA GLN LYS GLN ARG GLN ASN GLU SEQRES 38 A 910 GLU ASN ALA ASP ALA PRO VAL ASN SER LYS LYS ALA LYS SEQRES 39 A 910 TYR GLN GLY GLY LEU VAL PHE GLU PRO GLU LYS GLY LEU SEQRES 40 A 910 HIS LYS ASN TYR VAL LEU VAL MSE ASP PHE ASN SER LEU SEQRES 41 A 910 TYR PRO SER ILE ILE GLN GLU PHE ASN ILE CYS PHE THR SEQRES 42 A 910 THR VAL ASP ARG ASN LYS GLU ASP ILE ASP GLU LEU PRO SEQRES 43 A 910 SER VAL PRO PRO SER GLU VAL ASP GLN GLY VAL LEU PRO SEQRES 44 A 910 ARG LEU LEU ALA ASN LEU VAL ASP ARG ARG ARG GLU VAL SEQRES 45 A 910 LYS LYS VAL MSE LYS THR GLU THR ASP PRO HIS LYS ARG SEQRES 46 A 910 VAL GLN CYS ASP ILE ARG GLN GLN ALA LEU LYS LEU THR SEQRES 47 A 910 ALA ASN SER MSE TYR GLY CYS LEU GLY TYR VAL ASN SER SEQRES 48 A 910 ARG PHE TYR ALA LYS PRO LEU ALA MSE LEU VAL THR ASN SEQRES 49 A 910 LYS GLY ARG GLU ILE LEU MSE ASN THR ARG GLN LEU ALA SEQRES 50 A 910 GLU SER MSE ASN LEU LEU VAL VAL TYR GLY ASP THR ASP SEQRES 51 A 910 SER VAL MSE ILE ASP THR GLY CYS ASP ASN TYR ALA ASP SEQRES 52 A 910 ALA ILE LYS ILE GLY LEU GLY PHE LYS ARG LEU VAL ASN SEQRES 53 A 910 GLU ARG TYR ARG LEU LEU GLU ILE ASP ILE ASP ASN VAL SEQRES 54 A 910 PHE LYS LYS LEU LEU LEU HIS ALA LYS LYS LYS TYR ALA SEQRES 55 A 910 ALA LEU THR VAL ASN LEU ASP LYS ASN GLY ASN GLY THR SEQRES 56 A 910 THR VAL LEU GLU VAL LYS GLY LEU ASP MSE LYS ARG ARG SEQRES 57 A 910 GLU PHE CYS PRO LEU SER ARG ASP VAL SER ILE HIS VAL SEQRES 58 A 910 LEU ASN THR ILE LEU SER ASP LYS ASP PRO GLU GLU ALA SEQRES 59 A 910 LEU GLN GLU VAL TYR ASP TYR LEU GLU ASP ILE ARG ILE SEQRES 60 A 910 LYS VAL GLU THR ASN ASN ILE ARG ILE ASP LYS TYR LYS SEQRES 61 A 910 ILE ASN MSE LYS LEU SER LYS ASP PRO LYS ALA TYR PRO SEQRES 62 A 910 GLY GLY LYS ASN MSE PRO ALA VAL GLN VAL ALA LEU ARG SEQRES 63 A 910 MSE ARG LYS ALA GLY ARG VAL VAL LYS ALA GLY SER VAL SEQRES 64 A 910 ILE THR PHE VAL ILE THR LYS GLN ASP GLU ILE ASP ASN SEQRES 65 A 910 ALA ALA ASP THR PRO ALA LEU SER VAL ALA GLU ARG ALA SEQRES 66 A 910 HIS ALA LEU ASN GLU VAL MSE ILE LYS SER ASN ASN LEU SEQRES 67 A 910 ILE PRO ASP PRO GLN TYR TYR LEU GLU LYS GLN ILE PHE SEQRES 68 A 910 ALA PRO VAL GLU ARG LEU LEU GLU ARG ILE ASP SER PHE SEQRES 69 A 910 ASN VAL VAL ARG LEU SER GLU ALA LEU GLY LEU ASP SER SEQRES 70 A 910 LYS LYS TYR PHE ARG ARG GLU GLY GLY ASN ASN ASN GLY MODRES 4B08 MSE A 354 MET SELENOMETHIONINE MODRES 4B08 MSE A 383 MET SELENOMETHIONINE MODRES 4B08 MSE A 415 MET SELENOMETHIONINE MODRES 4B08 MSE A 430 MET SELENOMETHIONINE MODRES 4B08 MSE A 492 MET SELENOMETHIONINE MODRES 4B08 MSE A 533 MET SELENOMETHIONINE MODRES 4B08 MSE A 547 MET SELENOMETHIONINE MODRES 4B08 MSE A 619 MET SELENOMETHIONINE MODRES 4B08 MSE A 626 MET SELENOMETHIONINE MODRES 4B08 MSE A 652 MET SELENOMETHIONINE MODRES 4B08 MSE A 682 MET SELENOMETHIONINE MODRES 4B08 MSE A 703 MET SELENOMETHIONINE MODRES 4B08 MSE A 719 MET SELENOMETHIONINE MODRES 4B08 MSE A 747 MET SELENOMETHIONINE MODRES 4B08 MSE A 749 MET SELENOMETHIONINE MODRES 4B08 MSE A 759 MET SELENOMETHIONINE MODRES 4B08 MSE A 863 MET SELENOMETHIONINE MODRES 4B08 MSE A 924 MET SELENOMETHIONINE MODRES 4B08 MSE A 950 MET SELENOMETHIONINE MODRES 4B08 MSE A 968 MET SELENOMETHIONINE MODRES 4B08 MSE A 979 MET SELENOMETHIONINE MODRES 4B08 MSE A 988 MET SELENOMETHIONINE MODRES 4B08 MSE A 1001 MET SELENOMETHIONINE MODRES 4B08 MSE A 1073 MET SELENOMETHIONINE MODRES 4B08 MSE A 1131 MET SELENOMETHIONINE MODRES 4B08 MSE A 1146 MET SELENOMETHIONINE MODRES 4B08 MSE A 1155 MET SELENOMETHIONINE MODRES 4B08 MSE A 1200 MET SELENOMETHIONINE HET MSE A 354 17 HET MSE A 383 17 HET MSE A 415 17 HET MSE A 430 17 HET MSE A 492 17 HET MSE A 533 17 HET MSE A 547 17 HET MSE A 619 17 HET MSE A 626 17 HET MSE A 652 17 HET MSE A 682 17 HET MSE A 703 17 HET MSE A 719 17 HET MSE A 747 17 HET MSE A 749 17 HET MSE A 759 17 HET MSE A 863 17 HET MSE A 924 17 HET MSE A 950 17 HET MSE A 968 17 HET MSE A 979 17 HET MSE A 988 17 HET MSE A1001 17 HET MSE A1073 17 HET MSE A1131 17 HET MSE A1146 17 HET MSE A1155 17 HET MSE A1200 17 HETNAM MSE SELENOMETHIONINE FORMUL 2 MSE 28(C5 H11 N O2 SE) FORMUL 3 HOH *110(H2 O) HELIX 1 1 THR A 402 GLY A 419 1 18 HELIX 2 2 ASN A 480 ASN A 489 1 10 HELIX 3 3 LYS A 521 GLN A 523 5 3 HELIX 4 4 GLY A 597 LEU A 606 1 10 HELIX 5 5 ASN A 615 ASP A 631 1 17 HELIX 6 6 VAL A 643 LEU A 655 1 13 HELIX 7 7 THR A 659 GLY A 664 5 6 HELIX 8 8 MSE A 682 CYS A 691 1 10 HELIX 9 9 ASN A 701 LEU A 707 1 7 HELIX 10 10 ASP A 715 GLU A 725 1 11 HELIX 11 11 PRO A 738 ASP A 743 1 6 HELIX 12 12 ASP A 743 ILE A 768 1 26 HELIX 13 13 GLN A 769 GLY A 782 1 14 HELIX 14 14 ALA A 784 GLY A 791 1 8 HELIX 15 15 THR A 792 ASN A 808 1 17 HELIX 16 16 SER A 867 PHE A 876 1 10 HELIX 17 17 GLY A 904 GLU A 927 1 24 HELIX 18 18 ASP A 929 ASN A 948 1 20 HELIX 19 19 MSE A 950 TYR A 956 1 7 HELIX 20 20 ALA A 963 MSE A 988 1 26 HELIX 21 21 ASN A 1008 TYR A 1027 1 20 HELIX 22 22 CYS A 1079 LEU A 1094 1 16 HELIX 23 23 ASP A 1098 THR A 1119 1 22 HELIX 24 24 ARG A 1123 LYS A 1128 5 6 HELIX 25 25 ASP A 1136 TYR A 1140 5 5 HELIX 26 26 MSE A 1146 GLY A 1159 1 14 HELIX 27 27 LEU A 1196 ILE A 1201 1 6 HELIX 28 28 LYS A 1202 ASN A 1205 5 4 HELIX 29 29 ASP A 1209 LYS A 1216 1 8 HELIX 30 30 ILE A 1218 LEU A 1226 1 9 SHEET 1 AA 6 VAL A 515 VAL A 519 0 SHEET 2 AA 6 CYS A 379 ILE A 386 1 O SER A 381 N VAL A 515 SHEET 3 AA 6 THR A 365 LYS A 373 -1 O LEU A 366 N ILE A 386 SHEET 4 AA 6 PHE A 352 VAL A 362 -1 O PHE A 355 N LYS A 371 SHEET 5 AA 6 TRP A 496 ILE A 499 -1 O LEU A 497 N MSE A 354 SHEET 6 AA 6 ILE A 525 PRO A 527 -1 O THR A 526 N ASP A 498 SHEET 1 AB 4 ALA A 425 LYS A 431 0 SHEET 2 AB 4 GLU A 442 PRO A 451 -1 O SER A 443 N MSE A 430 SHEET 3 AB 4 CYS A 390 PRO A 397 -1 O ARG A 391 N LEU A 450 SHEET 4 AB 4 PHE A 471 PHE A 475 -1 N TYR A 472 O LEU A 396 SHEET 1 AC 6 ARG A 609 LEU A 612 0 SHEET 2 AC 6 ASP A 581 VAL A 586 1 O LEU A 582 N ARG A 609 SHEET 3 AC 6 LYS A 553 ILE A 567 -1 O ILE A 559 N LEU A 585 SHEET 4 AC 6 LEU A 536 ASN A 548 -1 O LEU A 536 N ILE A 567 SHEET 5 AC 6 VAL A 634 GLY A 637 1 O VAL A 634 N LEU A 539 SHEET 6 AC 6 LEU A 695 ASP A 698 1 O LEU A 695 N ILE A 635 SHEET 1 AD 2 GLY A 854 HIS A 856 0 SHEET 2 AD 2 ASP A1033 ALA A1045 1 O LEU A1041 N HIS A 856 SHEET 1 AE 6 LEU A 991 GLY A 995 0 SHEET 2 AE 6 SER A 999 ASP A1003 -1 O MSE A1001 N VAL A 993 SHEET 3 AE 6 VAL A 860 ASP A 864 -1 O LEU A 861 N ILE A1002 SHEET 4 AE 6 ASP A1033 ALA A1045 -1 O ASP A1033 N ASP A 864 SHEET 5 AE 6 LYS A1048 VAL A1054 -1 O LYS A1048 N ALA A1045 SHEET 6 AE 6 THR A1064 LYS A1069 -1 O VAL A1065 N THR A1053 SHEET 1 AF 5 LEU A 991 GLY A 995 0 SHEET 2 AF 5 SER A 999 ASP A1003 -1 O MSE A1001 N VAL A 993 SHEET 3 AF 5 VAL A 860 ASP A 864 -1 O LEU A 861 N ILE A1002 SHEET 4 AF 5 ASP A1033 ALA A1045 -1 O ASP A1033 N ASP A 864 SHEET 5 AF 5 GLY A 854 HIS A 856 1 O GLY A 854 N LEU A1043 SHEET 1 AG 3 ILE A1129 LYS A1132 0 SHEET 2 AG 3 VAL A1167 ILE A1172 -1 O ILE A1168 N MSE A1131 SHEET 3 AG 3 ALA A1193 ALA A1195 -1 O HIS A1194 N VAL A1171 LINK N MSE A 354 C GLN A 353 1555 1555 1.33 LINK C MSE A 354 N PHE A 355 1555 1555 1.33 LINK N MSE A 383 C ALA A 382 1555 1555 1.33 LINK C MSE A 383 N VAL A 384 1555 1555 1.33 LINK N MSE A 415 C LEU A 414 1555 1555 1.33 LINK C MSE A 415 N ASP A 416 1555 1555 1.33 LINK N MSE A 430 C LYS A 429 1555 1555 1.33 LINK C MSE A 430 N LYS A 431 1555 1555 1.33 LINK N MSE A 492 C ILE A 491 1555 1555 1.33 LINK C MSE A 492 N GLY A 493 1555 1555 1.33 LINK N MSE A 533 C THR A 532 1555 1555 1.33 LINK C MSE A 533 N PRO A 534 1555 1555 1.34 LINK N MSE A 547 C LEU A 546 1555 1555 1.33 LINK C MSE A 547 N ASN A 548 1555 1555 1.33 LINK N MSE A 619 C ALA A 618 1555 1555 1.33 LINK C MSE A 619 N LEU A 620 1555 1555 1.33 LINK N MSE A 626 C ALA A 625 1555 1555 1.33 LINK C MSE A 626 N LEU A 627 1555 1555 1.33 LINK N MSE A 652 C ARG A 651 1555 1555 1.33 LINK C MSE A 652 N HIS A 653 1555 1555 1.33 LINK N MSE A 682 C ASN A 681 1555 1555 1.33 LINK C MSE A 682 N ASN A 683 1555 1555 1.33 LINK N MSE A 703 C GLU A 702 1555 1555 1.33 LINK C MSE A 703 N GLY A 704 1555 1555 1.33 LINK N MSE A 719 C GLU A 718 1555 1555 1.33 LINK C MSE A 719 N TYR A 720 1555 1555 1.33 LINK N MSE A 747 C SER A 746 1555 1555 1.33 LINK C MSE A 747 N THR A 748 1555 1555 1.33 LINK C MSE A 749 N ALA A 750 1555 1555 1.33 LINK N MSE A 749 C THR A 748 1555 1555 1.33 LINK C MSE A 759 N ILE A 760 1555 1555 1.33 LINK N MSE A 759 C CYS A 758 1555 1555 1.33 LINK C MSE A 863 N ASP A 864 1555 1555 1.33 LINK N MSE A 863 C VAL A 862 1555 1555 1.33 LINK C MSE A 924 N LYS A 925 1555 1555 1.33 LINK N MSE A 924 C VAL A 923 1555 1555 1.33 LINK C MSE A 950 N TYR A 951 1555 1555 1.33 LINK N MSE A 950 C SER A 949 1555 1555 1.33 LINK C MSE A 968 N LEU A 969 1555 1555 1.33 LINK N MSE A 968 C ALA A 967 1555 1555 1.33 LINK C MSE A 979 N ASN A 980 1555 1555 1.33 LINK N MSE A 979 C LEU A 978 1555 1555 1.33 LINK C MSE A 988 N ASN A 989 1555 1555 1.33 LINK N MSE A 988 C SER A 987 1555 1555 1.33 LINK C MSE A1001 N ILE A1002 1555 1555 1.33 LINK N MSE A1001 C VAL A1000 1555 1555 1.33 LINK C MSE A1073 N LYS A1074 1555 1555 1.33 LINK N MSE A1073 C ASP A1072 1555 1555 1.33 LINK C MSE A1131 N LYS A1132 1555 1555 1.33 LINK N MSE A1131 C ASN A1130 1555 1555 1.33 LINK C MSE A1146 N PRO A1147 1555 1555 1.34 LINK N MSE A1146 C ASN A1145 1555 1555 1.33 LINK C MSE A1155 N ARG A1156 1555 1555 1.33 LINK N MSE A1155 C ARG A1154 1555 1555 1.33 LINK C MSE A1200 N ILE A1201 1555 1555 1.33 LINK N MSE A1200 C VAL A1199 1555 1555 1.33 CRYST1 73.969 127.447 144.076 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013519 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007846 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006941 0.00000