HEADER LYASE 01-JUL-12 4B0B TITLE CRYSTAL STRUCTURE OF 3-HYDROXYDECANOYL-ACYL CARRIER PROTEIN TITLE 2 DEHYDRATASE (FABA) FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH 3- TITLE 3 (PYRIDIN-2-YLOXY)ANILINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXYDECANOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-HYDROXYDECANOYL THIOESTER DEHYDRASE; COMPND 5 EC: 4.2.1.60; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 STRAIN: PA01; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: TUNER; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PDEST14 KEYWDS LYASE, FATTY ACID BIOSYNTHESIS, BACTERIAL VIRULENCE, DRUG DISCOVERY EXPDTA X-RAY DIFFRACTION AUTHOR L.MOYNIE,S.A.MCMAHON,F.G.DUTHIE,J.W.TAYLOR,J.H.NAISMITH REVDAT 4 20-DEC-23 4B0B 1 REMARK SHEET REVDAT 3 23-MAY-18 4B0B 1 JRNL REVDAT 2 16-JAN-13 4B0B 1 JRNL REVDAT 1 28-NOV-12 4B0B 0 JRNL AUTH L.MOYNIE,S.M.LECKIE,S.A.MCMAHON,F.G.DUTHIE,A.KOEHNKE, JRNL AUTH 2 J.W.TAYLOR,M.S.ALPHEY,R.BRENK,A.D.SMITH,J.H.NAISMITH JRNL TITL STRUCTURAL INSIGHTS INTO THE MECHANISM AND INHIBITION OF THE JRNL TITL 2 BETA-HYDROXYDECANOYL-ACYL CARRIER PROTEIN DEHYDRATASE FROM JRNL TITL 3 PSEUDOMONASAERUGINOSA. JRNL REF J.MOL.BIOL. V. 425 365 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23174186 JRNL DOI 10.1016/J.JMB.2012.11.017 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 25582 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1353 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1822 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3580 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.4030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2617 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 299 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.83000 REMARK 3 B33 (A**2) : -0.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.183 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.290 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2742 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1894 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3712 ; 1.255 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4574 ; 0.747 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 345 ; 8.012 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;34.577 ;23.171 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 443 ;14.266 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;14.733 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 392 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3116 ; 0.015 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 611 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1685 ; 1.510 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 710 ; 0.584 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2695 ; 2.250 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1057 ; 3.703 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1015 ; 5.632 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 107 2 REMARK 3 1 B 2 B 107 2 REMARK 3 2 A 112 A 151 2 REMARK 3 2 B 112 B 151 2 REMARK 3 3 A 152 A 171 2 REMARK 3 3 B 152 B 171 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 964 ; 0.08 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 964 ; 0.08 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 1215 ; 0.34 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1215 ; 0.34 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 964 ; 1.00 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 964 ; 1.00 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1215 ; 1.36 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1215 ; 1.36 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 19 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1180 9.3150 -3.3420 REMARK 3 T TENSOR REMARK 3 T11: 0.1309 T22: 0.1324 REMARK 3 T33: 0.1964 T12: 0.0791 REMARK 3 T13: 0.0615 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 2.0368 L22: 3.3953 REMARK 3 L33: 6.9236 L12: -1.6987 REMARK 3 L13: 0.4750 L23: -1.6488 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: 0.2682 S13: -0.1275 REMARK 3 S21: -0.1429 S22: -0.1170 S23: -0.3258 REMARK 3 S31: 0.3417 S32: 0.5939 S33: 0.1013 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 151 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7870 17.7760 2.6020 REMARK 3 T TENSOR REMARK 3 T11: 0.0808 T22: 0.0108 REMARK 3 T33: 0.1014 T12: 0.0029 REMARK 3 T13: 0.0135 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 1.1849 L22: 0.5005 REMARK 3 L33: 1.2278 L12: -0.0131 REMARK 3 L13: -0.0968 L23: -0.0643 REMARK 3 S TENSOR REMARK 3 S11: 0.0433 S12: 0.0341 S13: 0.0176 REMARK 3 S21: -0.0204 S22: -0.0365 S23: -0.0577 REMARK 3 S31: 0.0268 S32: 0.0894 S33: -0.0068 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 152 A 171 REMARK 3 ORIGIN FOR THE GROUP (A): 20.7580 22.3710 9.2100 REMARK 3 T TENSOR REMARK 3 T11: 0.1227 T22: 0.1419 REMARK 3 T33: 0.1713 T12: -0.0440 REMARK 3 T13: 0.0172 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.8890 L22: 1.0775 REMARK 3 L33: 2.7070 L12: 0.2497 REMARK 3 L13: 0.1961 L23: 0.8532 REMARK 3 S TENSOR REMARK 3 S11: 0.1289 S12: -0.3186 S13: 0.0401 REMARK 3 S21: 0.0080 S22: 0.0461 S23: -0.2007 REMARK 3 S31: -0.0575 S32: 0.1249 S33: -0.1750 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 19 REMARK 3 ORIGIN FOR THE GROUP (A): -2.4030 8.4840 27.0590 REMARK 3 T TENSOR REMARK 3 T11: 0.1558 T22: 0.0856 REMARK 3 T33: 0.1891 T12: -0.0431 REMARK 3 T13: 0.0938 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 1.6094 L22: 4.8437 REMARK 3 L33: 5.7166 L12: 0.8216 REMARK 3 L13: 1.5709 L23: 1.7387 REMARK 3 S TENSOR REMARK 3 S11: -0.0916 S12: -0.2128 S13: -0.0656 REMARK 3 S21: 0.3610 S22: -0.1184 S23: 0.6263 REMARK 3 S31: 0.4388 S32: -0.4018 S33: 0.2100 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 20 B 151 REMARK 3 ORIGIN FOR THE GROUP (A): 7.6630 17.3960 21.2710 REMARK 3 T TENSOR REMARK 3 T11: 0.0852 T22: 0.0352 REMARK 3 T33: 0.0848 T12: 0.0032 REMARK 3 T13: 0.0025 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.2700 L22: 0.6309 REMARK 3 L33: 1.5664 L12: -0.1685 REMARK 3 L13: -0.6547 L23: 0.0827 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: -0.1586 S13: -0.0458 REMARK 3 S21: 0.0785 S22: -0.0016 S23: 0.0560 REMARK 3 S31: -0.0230 S32: -0.0012 S33: -0.0055 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 152 B 171 REMARK 3 ORIGIN FOR THE GROUP (A): 4.5160 22.1010 14.6790 REMARK 3 T TENSOR REMARK 3 T11: 0.1566 T22: 0.1023 REMARK 3 T33: 0.1484 T12: 0.0040 REMARK 3 T13: 0.0543 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 4.5388 L22: 1.5351 REMARK 3 L33: 3.0720 L12: -0.3721 REMARK 3 L13: 1.3881 L23: -0.4070 REMARK 3 S TENSOR REMARK 3 S11: 0.0591 S12: 0.2077 S13: 0.1246 REMARK 3 S21: -0.0649 S22: 0.0253 S23: 0.1127 REMARK 3 S31: -0.0925 S32: 0.0103 S33: -0.0844 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4B0B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1290053130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26978 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 37.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 7.780 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.43 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.210 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4FQ9 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 % PEG 8000,0.2 M MAGNESIUM REMARK 280 CHLORIDE, TRIS-HCL PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 29.66000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.99500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.66000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.99500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2100 O HOH B 2102 2.03 REMARK 500 O HOH A 2004 O HOH A 2007 2.12 REMARK 500 O HOH A 2079 O HOH A 2143 2.13 REMARK 500 O HOH A 2127 O HOH A 2160 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU B 10 NH2 ARG B 14 2555 2.04 REMARK 500 O HOH A 2016 O HOH A 2035 2655 2.10 REMARK 500 O HOH A 2036 O HOH B 2057 1554 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 74 66.96 -156.54 REMARK 500 SER A 137 -62.98 82.51 REMARK 500 ASP B 74 64.68 -156.39 REMARK 500 PHE B 114 23.91 -141.49 REMARK 500 SER B 137 -65.59 72.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2029 DISTANCE = 6.11 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 54F A 1172 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 54F B 1172 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4B0C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF 3-HYDROXYDECANOYL-ACYL CARRIER PROTEIN REMARK 900 DEHYDRATASE (FABA) FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH 3- REMARK 900 (PENTYLTHIO)-4H-1,2,4-TRIAZOLE REMARK 900 RELATED ID: 4B0I RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF 3-HYDROXYDECANOYL-ACYL CARRIER PROTEIN REMARK 900 DEHYDRATASE (FABA) MUTANT (H70N) FROM PSEUDOMONAS AERUGINOSA IN REMARK 900 COMPLEX WITH 3-HYDROXYDECANOYL-N-ACETYL CYSTEAMINE REMARK 900 RELATED ID: 4B8U RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF 3-HYDROXYDECANOYL-ACYL CARRIER PROTEIN REMARK 900 DEHYDRATASE (FABA) FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH N- REMARK 900 ISOBUTYL-2-(5-(2-THIENYL)-1,2- OXAZOL-3-YL-)METHOXY)ACETAMIDE REMARK 900 RELATED ID: 4FQ9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF 3-HYDROXYDECANOYL-ACYL CARRIER PROTEIN REMARK 900 DEHYDRATASE (FABA) FROM PSEUDOMONAS AERUGINOSA DBREF 4B0B A 1 171 UNP O33877 FABA_PSEAE 1 171 DBREF 4B0B B 1 171 UNP O33877 FABA_PSEAE 1 171 SEQRES 1 A 171 MET THR LYS GLN HIS ALA PHE THR ARG GLU ASP LEU LEU SEQRES 2 A 171 ARG CYS SER ARG GLY GLU LEU PHE GLY PRO GLY ASN ALA SEQRES 3 A 171 GLN LEU PRO ALA PRO ASN MET LEU MET ILE ASP ARG ILE SEQRES 4 A 171 VAL HIS ILE SER ASP VAL GLY GLY LYS TYR GLY LYS GLY SEQRES 5 A 171 GLU LEU VAL ALA GLU LEU ASP ILE ASN PRO ASP LEU TRP SEQRES 6 A 171 PHE PHE ALA CYS HIS PHE GLU GLY ASP PRO VAL MET PRO SEQRES 7 A 171 GLY CYS LEU GLY LEU ASP ALA MET TRP GLN LEU VAL GLY SEQRES 8 A 171 PHE TYR LEU GLY TRP GLN GLY ASN PRO GLY ARG GLY ARG SEQRES 9 A 171 ALA LEU GLY SER GLY GLU VAL LYS PHE PHE GLY GLN VAL SEQRES 10 A 171 LEU PRO THR ALA LYS LYS VAL THR TYR ASN ILE HIS ILE SEQRES 11 A 171 LYS ARG THR ILE ASN ARG SER LEU VAL LEU ALA ILE ALA SEQRES 12 A 171 ASP GLY THR VAL SER VAL ASP GLY ARG GLU ILE TYR SER SEQRES 13 A 171 ALA GLU GLY LEU ARG VAL GLY LEU PHE THR SER THR ASP SEQRES 14 A 171 SER PHE SEQRES 1 B 171 MET THR LYS GLN HIS ALA PHE THR ARG GLU ASP LEU LEU SEQRES 2 B 171 ARG CYS SER ARG GLY GLU LEU PHE GLY PRO GLY ASN ALA SEQRES 3 B 171 GLN LEU PRO ALA PRO ASN MET LEU MET ILE ASP ARG ILE SEQRES 4 B 171 VAL HIS ILE SER ASP VAL GLY GLY LYS TYR GLY LYS GLY SEQRES 5 B 171 GLU LEU VAL ALA GLU LEU ASP ILE ASN PRO ASP LEU TRP SEQRES 6 B 171 PHE PHE ALA CYS HIS PHE GLU GLY ASP PRO VAL MET PRO SEQRES 7 B 171 GLY CYS LEU GLY LEU ASP ALA MET TRP GLN LEU VAL GLY SEQRES 8 B 171 PHE TYR LEU GLY TRP GLN GLY ASN PRO GLY ARG GLY ARG SEQRES 9 B 171 ALA LEU GLY SER GLY GLU VAL LYS PHE PHE GLY GLN VAL SEQRES 10 B 171 LEU PRO THR ALA LYS LYS VAL THR TYR ASN ILE HIS ILE SEQRES 11 B 171 LYS ARG THR ILE ASN ARG SER LEU VAL LEU ALA ILE ALA SEQRES 12 B 171 ASP GLY THR VAL SER VAL ASP GLY ARG GLU ILE TYR SER SEQRES 13 B 171 ALA GLU GLY LEU ARG VAL GLY LEU PHE THR SER THR ASP SEQRES 14 B 171 SER PHE HET 54F A1172 14 HET 54F B1172 14 HETNAM 54F 3-(PYRIDIN-2-YLOXY)ANILINE FORMUL 3 54F 2(C11 H10 N2 O) FORMUL 5 HOH *299(H2 O) HELIX 1 1 THR A 8 ARG A 17 1 10 HELIX 2 2 TRP A 65 HIS A 70 1 6 HELIX 3 3 PRO A 78 GLN A 97 1 20 HELIX 4 4 THR B 8 ARG B 17 1 10 HELIX 5 5 TRP B 65 HIS B 70 1 6 HELIX 6 6 PRO B 78 GLN B 97 1 20 SHEET 1 AA 8 ARG A 38 SER A 43 0 SHEET 2 AA 8 GLU A 53 ASP A 59 -1 O GLU A 53 N SER A 43 SHEET 3 AA 8 LYS A 123 ASN A 135 -1 O VAL A 124 N LEU A 58 SHEET 4 AA 8 VAL A 139 VAL A 149 -1 O LEU A 140 N ILE A 134 SHEET 5 AA 8 ARG A 152 PHE A 165 -1 O ARG A 152 N VAL A 149 SHEET 6 AA 8 ARG A 102 SER A 108 -1 O ARG A 102 N PHE A 165 SHEET 7 AA 8 VAL B 111 PHE B 113 -1 O VAL B 111 N SER A 108 SHEET 8 AA 8 ARG B 152 PHE B 165 -1 O SER B 156 N LYS B 112 SHEET 1 AB 2 ARG A 38 SER A 43 0 SHEET 2 AB 2 ARG B 152 PHE B 165 1 O ARG B 161 N LEU B 106 CISPEP 1 PRO A 31 ASN A 32 0 11.55 CISPEP 2 HIS A 70 PHE A 71 0 -8.22 CISPEP 3 PRO B 31 ASN B 32 0 19.02 CISPEP 4 HIS B 70 PHE B 71 0 -3.33 SITE 1 AC1 12 ASP A 84 TRP A 87 GLN A 88 GLY A 103 SITE 2 AC1 12 ARG A 104 ALA A 105 HIS B 70 PHE B 71 SITE 3 AC1 12 MET B 77 GLY B 79 GLY B 115 HOH B2085 SITE 1 AC2 13 HIS A 70 PHE A 71 MET A 77 GLY A 79 SITE 2 AC2 13 GLY A 115 HOH A2102 HOH A2110 ASP B 84 SITE 3 AC2 13 TRP B 87 GLN B 88 GLY B 103 ARG B 104 SITE 4 AC2 13 ALA B 105 CRYST1 59.320 117.990 47.980 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016858 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008475 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020842 0.00000 MTRIX1 1 -0.999500 -0.031040 0.002804 25.89000 1 MTRIX2 1 -0.030960 0.999200 0.023520 0.16370 1 MTRIX3 1 -0.003532 0.023430 -0.999700 23.46000 1