data_4B2H # _entry.id 4B2H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4B2H pdb_00004b2h 10.2210/pdb4b2h/pdb PDBE EBI-53366 ? ? WWPDB D_1290053366 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2CC8 unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE LIGANDS' PDB 2CCB unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE LIGANDS' PDB 2VX9 unspecified 'H. SALINARUM DODECIN E45A MUTANT' PDB 4B2L unspecified 'HUMANISED MONOMERIC RADA IN COMPLEX WITH L-METHYLESTER TRYPTOPHAN' PDB 4B2K unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE' PDB 4B2J unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE LIGANDS' PDB 4B2M unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE LIGANDS' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4B2H _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-07-16 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yu, Y.' 1 'Heidel, B.' 2 'Parapugna, T.L.' 3 'Wenderhold-Reeb, S.' 4 'Song, B.' 5 'Schoenherr, H.' 6 'Grininger, M.' 7 'Noell, G.' 8 # _citation.id primary _citation.title 'The Flavoprotein Dodecin as a Redox Probe for Electron Transfer Through DNA.' _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_volume 52 _citation.page_first 4950 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1433-7851 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23532984 _citation.pdbx_database_id_DOI 10.1002/ANIE.201208987 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yu, Y.' 1 ? primary 'Heidel, B.' 2 ? primary 'Parapugna, T.L.' 3 ? primary 'Wenderhold-Reeb, S.' 4 ? primary 'Song, B.' 5 ? primary 'Schonherr, H.' 6 ? primary 'Grininger, M.' 7 ? primary 'Noll, G.' 8 ? # _cell.entry_id 4B2H _cell.length_a 142.005 _cell.length_b 142.005 _cell.length_c 142.005 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B2H _symmetry.space_group_name_H-M 'F 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man DODECIN 8196.948 1 ? YES ? 'LIGAND-BOUND FORM' 2 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn '3-[7,8-dimethyl-2,4-bis(oxidanylidene)benzo[g]pteridin-10-yl]propylcarbamic acid' 343.337 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 7 water nat water 18.015 79 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MVFKKVLLTGTSEESFTAAADDAIDRAEDTLDNVVWAEVVDQGVAIGAVRTYQTEVQVAFELDGSQLEHHHHHH _entity_poly.pdbx_seq_one_letter_code_can MVFKKVLLTGTSEESFTAAADDAIDRAEDTLDNVVWAEVVDQGVAIGAVRTYQTEVQVAFELDGSQLEHHHHHH _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 PHE n 1 4 LYS n 1 5 LYS n 1 6 VAL n 1 7 LEU n 1 8 LEU n 1 9 THR n 1 10 GLY n 1 11 THR n 1 12 SER n 1 13 GLU n 1 14 GLU n 1 15 SER n 1 16 PHE n 1 17 THR n 1 18 ALA n 1 19 ALA n 1 20 ALA n 1 21 ASP n 1 22 ASP n 1 23 ALA n 1 24 ILE n 1 25 ASP n 1 26 ARG n 1 27 ALA n 1 28 GLU n 1 29 ASP n 1 30 THR n 1 31 LEU n 1 32 ASP n 1 33 ASN n 1 34 VAL n 1 35 VAL n 1 36 TRP n 1 37 ALA n 1 38 GLU n 1 39 VAL n 1 40 VAL n 1 41 ASP n 1 42 GLN n 1 43 GLY n 1 44 VAL n 1 45 ALA n 1 46 ILE n 1 47 GLY n 1 48 ALA n 1 49 VAL n 1 50 ARG n 1 51 THR n 1 52 TYR n 1 53 GLN n 1 54 THR n 1 55 GLU n 1 56 VAL n 1 57 GLN n 1 58 VAL n 1 59 ALA n 1 60 PHE n 1 61 GLU n 1 62 LEU n 1 63 ASP n 1 64 GLY n 1 65 SER n 1 66 GLN n 1 67 LEU n 1 68 GLU n 1 69 HIS n 1 70 HIS n 1 71 HIS n 1 72 HIS n 1 73 HIS n 1 74 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain R1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HALOBACTERIUM SALINARUM' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 478009 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET22B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'GERMAN COLLECTION OF MICROORGANISMS (DSM 671)' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B0R5M0_HALS3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession B0R5M0 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4B2H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 66 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B0R5M0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 68 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 66 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4B2H ALA A 45 ? UNP B0R5M0 GLU 45 'engineered mutation' 45 1 1 4B2H ? A ? ? UNP B0R5M0 GLU 50 deletion ? 2 1 4B2H ? A ? ? UNP B0R5M0 GLU 51 deletion ? 3 1 4B2H LEU A 67 ? UNP B0R5M0 ? ? 'expression tag' 67 4 1 4B2H GLU A 68 ? UNP B0R5M0 ? ? 'expression tag' 68 5 1 4B2H HIS A 69 ? UNP B0R5M0 ? ? 'expression tag' 69 6 1 4B2H HIS A 70 ? UNP B0R5M0 ? ? 'expression tag' 70 7 1 4B2H HIS A 71 ? UNP B0R5M0 ? ? 'expression tag' 71 8 1 4B2H HIS A 72 ? UNP B0R5M0 ? ? 'expression tag' 72 9 1 4B2H HIS A 73 ? UNP B0R5M0 ? ? 'expression tag' 73 10 1 4B2H HIS A 74 ? UNP B0R5M0 ? ? 'expression tag' 74 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C3F non-polymer . '3-[7,8-dimethyl-2,4-bis(oxidanylidene)benzo[g]pteridin-10-yl]propylcarbamic acid' ? 'C16 H17 N5 O4' 343.337 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4B2H _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.44 _exptl_crystal.density_percent_sol 72.28 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-05-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9393 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength 0.9393 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4B2H _reflns.observed_criterion_sigma_I 5.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 1.60 _reflns.number_obs 20156 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 18 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.70 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.625 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.20 _reflns_shell.pdbx_redundancy 18 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4B2H _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15863 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 99.86 _refine.ls_R_factor_obs 0.16709 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16650 _refine.ls_R_factor_R_free 0.17759 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 862 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.969 _refine.B_iso_mean 21.739 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2CCC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.057 _refine.pdbx_overall_ESU_R_Free 0.056 _refine.overall_SU_ML 0.032 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.897 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 473 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 586 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.033 0.020 ? 522 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3.763 1.999 ? 719 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.192 5.000 ? 65 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 27.976 26.250 ? 24 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 10.752 15.000 ? 77 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.386 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.302 0.200 ? 86 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.017 0.020 ? 397 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.641 _refine_ls_shell.number_reflns_R_work 1001 _refine_ls_shell.R_factor_R_work 0.224 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.293 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4B2H _struct.title 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE LIGANDS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4B2H _struct_keywords.pdbx_keywords FLAVOPROTEIN _struct_keywords.text 'FLAVOPROTEIN, BIOTECHNOLOGICAL APPLICATION OF DODECIN BINDING PROPERTIES, FLAVIN-DNA LIGAND HYBRID' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 2 ? F N N 5 ? G N N 6 ? H N N 7 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 15 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 31 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 15 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 31 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 14 OE2 ? ? ? 1_555 F MG . MG ? ? A GLU 14 A MG 105 1_555 ? ? ? ? ? ? ? 2.117 ? ? metalc2 metalc ? ? A ASP 41 OD2 ? ? ? 80_555 B NA . NA ? ? A ASP 41 A NA 101 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc3 metalc ? ? B NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 101 A HOH 2059 80_555 ? ? ? ? ? ? ? 2.528 ? ? metalc4 metalc ? ? B NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 101 A HOH 2072 1_555 ? ? ? ? ? ? ? 1.962 ? ? metalc5 metalc ? ? B NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 101 A HOH 2073 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc6 metalc ? ? B NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 101 A HOH 2074 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc7 metalc ? ? E NA . NA ? ? ? 1_555 G CL . CL ? ? A NA 104 A CL 106 1_555 ? ? ? ? ? ? ? 2.679 ? ? metalc8 metalc ? ? E NA . NA ? ? ? 1_555 G CL . CL ? ? A NA 104 A CL 106 59_555 ? ? ? ? ? ? ? 2.679 ? ? metalc9 metalc ? ? E NA . NA ? ? ? 1_555 G CL . CL ? ? A NA 104 A CL 106 80_555 ? ? ? ? ? ? ? 2.679 ? ? metalc10 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 104 A HOH 2008 59_555 ? ? ? ? ? ? ? 2.307 ? ? metalc11 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 104 A HOH 2008 80_555 ? ? ? ? ? ? ? 2.307 ? ? metalc12 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 104 A HOH 2008 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc13 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 104 A HOH 2078 1_555 ? ? ? ? ? ? ? 2.773 ? ? metalc14 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 104 A HOH 2078 59_555 ? ? ? ? ? ? ? 2.773 ? ? metalc15 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 104 A HOH 2078 80_555 ? ? ? ? ? ? ? 2.773 ? ? metalc16 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 105 A HOH 2021 1_555 ? ? ? ? ? ? ? 2.126 ? ? metalc17 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 105 A HOH 2023 1_555 ? ? ? ? ? ? ? 2.105 ? ? metalc18 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 105 A HOH 2027 1_555 ? ? ? ? ? ? ? 2.040 ? ? metalc19 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 105 A HOH 2028 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc20 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 105 A HOH 2079 1_555 ? ? ? ? ? ? ? 2.118 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 PHE A 3 ? SER A 12 ? PHE A 3 SER A 12 AA 2 ARG A 50 ? GLU A 61 ? ARG A 50 GLU A 61 AA 3 VAL A 34 ? ILE A 46 ? VAL A 34 ILE A 46 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N SER A 12 ? N SER A 12 O TYR A 52 ? O TYR A 52 AA 2 3 O ALA A 59 ? O ALA A 59 N VAL A 35 ? N VAL A 35 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 101 ? 5 'BINDING SITE FOR RESIDUE NA A 101' AC2 Software A MG 105 ? 6 'BINDING SITE FOR RESIDUE MG A 105' AC3 Software A NA 104 ? 9 'BINDING SITE FOR RESIDUE NA A 104' AC4 Software A CL 106 ? 9 'BINDING SITE FOR RESIDUE CL A 106' AC5 Software A SO4 102 ? 12 'BINDING SITE FOR RESIDUE SO4 A 102' AC6 Software A C3F 103 ? 9 'BINDING SITE FOR RESIDUE C3F A 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 41 ? ASP A 41 . ? 80_555 ? 2 AC1 5 HOH H . ? HOH A 2059 . ? 80_555 ? 3 AC1 5 HOH H . ? HOH A 2072 . ? 1_555 ? 4 AC1 5 HOH H . ? HOH A 2073 . ? 1_555 ? 5 AC1 5 HOH H . ? HOH A 2074 . ? 1_555 ? 6 AC2 6 GLU A 14 ? GLU A 14 . ? 1_555 ? 7 AC2 6 HOH H . ? HOH A 2021 . ? 1_555 ? 8 AC2 6 HOH H . ? HOH A 2023 . ? 1_555 ? 9 AC2 6 HOH H . ? HOH A 2027 . ? 1_555 ? 10 AC2 6 HOH H . ? HOH A 2028 . ? 1_555 ? 11 AC2 6 HOH H . ? HOH A 2079 . ? 1_555 ? 12 AC3 9 CL G . ? CL A 106 . ? 1_555 ? 13 AC3 9 CL G . ? CL A 106 . ? 59_555 ? 14 AC3 9 CL G . ? CL A 106 . ? 80_555 ? 15 AC3 9 HOH H . ? HOH A 2008 . ? 1_555 ? 16 AC3 9 HOH H . ? HOH A 2008 . ? 80_555 ? 17 AC3 9 HOH H . ? HOH A 2008 . ? 59_555 ? 18 AC3 9 HOH H . ? HOH A 2078 . ? 80_555 ? 19 AC3 9 HOH H . ? HOH A 2078 . ? 59_555 ? 20 AC3 9 HOH H . ? HOH A 2078 . ? 1_555 ? 21 AC4 9 GLN A 57 ? GLN A 57 . ? 80_555 ? 22 AC4 9 GLN A 57 ? GLN A 57 . ? 59_555 ? 23 AC4 9 GLN A 57 ? GLN A 57 . ? 1_555 ? 24 AC4 9 NA E . ? NA A 104 . ? 59_555 ? 25 AC4 9 NA E . ? NA A 104 . ? 80_555 ? 26 AC4 9 NA E . ? NA A 104 . ? 1_555 ? 27 AC4 9 HOH H . ? HOH A 2037 . ? 59_555 ? 28 AC4 9 HOH H . ? HOH A 2037 . ? 80_555 ? 29 AC4 9 HOH H . ? HOH A 2037 . ? 1_555 ? 30 AC5 12 SER A 15 ? SER A 15 . ? 5_555 ? 31 AC5 12 SER A 15 ? SER A 15 . ? 9_555 ? 32 AC5 12 SER A 15 ? SER A 15 . ? 1_555 ? 33 AC5 12 PHE A 16 ? PHE A 16 . ? 9_555 ? 34 AC5 12 PHE A 16 ? PHE A 16 . ? 1_555 ? 35 AC5 12 PHE A 16 ? PHE A 16 . ? 5_555 ? 36 AC5 12 THR A 17 ? THR A 17 . ? 5_555 ? 37 AC5 12 THR A 17 ? THR A 17 . ? 1_555 ? 38 AC5 12 THR A 17 ? THR A 17 . ? 9_555 ? 39 AC5 12 HOH H . ? HOH A 2075 . ? 9_555 ? 40 AC5 12 HOH H . ? HOH A 2075 . ? 5_555 ? 41 AC5 12 HOH H . ? HOH A 2075 . ? 1_555 ? 42 AC6 9 PHE A 3 ? PHE A 3 . ? 1_555 ? 43 AC6 9 VAL A 35 ? VAL A 35 . ? 1_555 ? 44 AC6 9 TRP A 36 ? TRP A 36 . ? 1_555 ? 45 AC6 9 VAL A 44 ? VAL A 44 . ? 5_555 ? 46 AC6 9 ALA A 45 ? ALA A 45 . ? 5_555 ? 47 AC6 9 ILE A 46 ? ILE A 46 . ? 5_555 ? 48 AC6 9 GLN A 53 ? GLN A 53 . ? 5_555 ? 49 AC6 9 GLN A 53 ? GLN A 53 . ? 80_555 ? 50 AC6 9 HOH H . ? HOH A 2077 . ? 1_555 ? # _database_PDB_matrix.entry_id 4B2H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4B2H _atom_sites.fract_transf_matrix[1][1] 0.007042 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007042 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007042 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 TRP 36 36 36 TRP TRP A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLY 64 64 ? ? ? A . n A 1 65 SER 65 65 ? ? ? A . n A 1 66 GLN 66 66 ? ? ? A . n A 1 67 LEU 67 67 ? ? ? A . n A 1 68 GLU 68 68 ? ? ? A . n A 1 69 HIS 69 69 ? ? ? A . n A 1 70 HIS 70 70 ? ? ? A . n A 1 71 HIS 71 71 ? ? ? A . n A 1 72 HIS 72 72 ? ? ? A . n A 1 73 HIS 73 73 ? ? ? A . n A 1 74 HIS 74 74 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 101 101 NA NA A . C 3 SO4 1 102 102 SO4 SO4 A . D 4 C3F 1 103 103 C3F C3F A . E 2 NA 1 104 104 NA NA A . F 5 MG 1 105 105 MG MG A . G 6 CL 1 106 106 CL CL A . H 7 HOH 1 2001 2001 HOH HOH A . H 7 HOH 2 2002 2002 HOH HOH A . H 7 HOH 3 2003 2003 HOH HOH A . H 7 HOH 4 2004 2004 HOH HOH A . H 7 HOH 5 2005 2005 HOH HOH A . H 7 HOH 6 2006 2006 HOH HOH A . H 7 HOH 7 2007 2007 HOH HOH A . H 7 HOH 8 2008 2008 HOH HOH A . H 7 HOH 9 2009 2009 HOH HOH A . H 7 HOH 10 2010 2010 HOH HOH A . H 7 HOH 11 2011 2011 HOH HOH A . H 7 HOH 12 2012 2012 HOH HOH A . H 7 HOH 13 2013 2013 HOH HOH A . H 7 HOH 14 2014 2014 HOH HOH A . H 7 HOH 15 2015 2015 HOH HOH A . H 7 HOH 16 2016 2016 HOH HOH A . H 7 HOH 17 2017 2017 HOH HOH A . H 7 HOH 18 2018 2018 HOH HOH A . H 7 HOH 19 2019 2019 HOH HOH A . H 7 HOH 20 2020 2020 HOH HOH A . H 7 HOH 21 2021 2021 HOH HOH A . H 7 HOH 22 2022 2022 HOH HOH A . H 7 HOH 23 2023 2023 HOH HOH A . H 7 HOH 24 2024 2024 HOH HOH A . H 7 HOH 25 2025 2025 HOH HOH A . H 7 HOH 26 2026 2026 HOH HOH A . H 7 HOH 27 2027 2027 HOH HOH A . H 7 HOH 28 2028 2028 HOH HOH A . H 7 HOH 29 2029 2029 HOH HOH A . H 7 HOH 30 2030 2030 HOH HOH A . H 7 HOH 31 2031 2031 HOH HOH A . H 7 HOH 32 2032 2032 HOH HOH A . H 7 HOH 33 2033 2033 HOH HOH A . H 7 HOH 34 2034 2034 HOH HOH A . H 7 HOH 35 2035 2035 HOH HOH A . H 7 HOH 36 2036 2036 HOH HOH A . H 7 HOH 37 2037 2037 HOH HOH A . H 7 HOH 38 2038 2038 HOH HOH A . H 7 HOH 39 2039 2039 HOH HOH A . H 7 HOH 40 2040 2040 HOH HOH A . H 7 HOH 41 2041 2041 HOH HOH A . H 7 HOH 42 2042 2042 HOH HOH A . H 7 HOH 43 2043 2043 HOH HOH A . H 7 HOH 44 2044 2044 HOH HOH A . H 7 HOH 45 2045 2045 HOH HOH A . H 7 HOH 46 2046 2046 HOH HOH A . H 7 HOH 47 2047 2047 HOH HOH A . H 7 HOH 48 2048 2048 HOH HOH A . H 7 HOH 49 2049 2049 HOH HOH A . H 7 HOH 50 2050 2050 HOH HOH A . H 7 HOH 51 2051 2051 HOH HOH A . H 7 HOH 52 2052 2052 HOH HOH A . H 7 HOH 53 2053 2053 HOH HOH A . H 7 HOH 54 2054 2054 HOH HOH A . H 7 HOH 55 2055 2055 HOH HOH A . H 7 HOH 56 2056 2056 HOH HOH A . H 7 HOH 57 2057 2057 HOH HOH A . H 7 HOH 58 2058 2058 HOH HOH A . H 7 HOH 59 2059 2059 HOH HOH A . H 7 HOH 60 2060 2060 HOH HOH A . H 7 HOH 61 2061 2061 HOH HOH A . H 7 HOH 62 2062 2062 HOH HOH A . H 7 HOH 63 2063 2063 HOH HOH A . H 7 HOH 64 2064 2064 HOH HOH A . H 7 HOH 65 2065 2065 HOH HOH A . H 7 HOH 66 2066 2066 HOH HOH A . H 7 HOH 67 2067 2067 HOH HOH A . H 7 HOH 68 2068 2068 HOH HOH A . H 7 HOH 69 2069 2069 HOH HOH A . H 7 HOH 70 2070 2070 HOH HOH A . H 7 HOH 71 2071 2071 HOH HOH A . H 7 HOH 72 2072 2072 HOH HOH A . H 7 HOH 73 2073 2073 HOH HOH A . H 7 HOH 74 2074 2074 HOH HOH A . H 7 HOH 75 2075 2075 HOH HOH A . H 7 HOH 76 2076 2076 HOH HOH A . H 7 HOH 77 2077 2077 HOH HOH A . H 7 HOH 78 2078 2078 HOH HOH A . H 7 HOH 79 2079 2079 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 33020 ? 1 MORE -592.7 ? 1 'SSA (A^2)' 25360 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 9_555 y,z,x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 3 'crystal symmetry operation' 5_555 z,x,y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 4 'crystal symmetry operation' 52_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 5 'crystal symmetry operation' 59_555 y,-z,-x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 6 'crystal symmetry operation' 54_555 z,-x,-y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 7 'crystal symmetry operation' 75_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 8 'crystal symmetry operation' 82_555 -y,z,-x 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 9 'crystal symmetry operation' 80_555 -z,x,-y 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 10 'crystal symmetry operation' 36_555 -y,-z,x 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 11 'crystal symmetry operation' 31_555 -z,-x,y 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 12 'crystal symmetry operation' 26_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A SO4 102 ? C SO4 . 2 1 A SO4 102 ? C SO4 . 3 1 A NA 104 ? E NA . 4 1 A CL 106 ? G CL . 5 1 A HOH 2031 ? H HOH . 6 1 A HOH 2037 ? H HOH . 7 1 A HOH 2051 ? H HOH . 8 1 A HOH 2061 ? H HOH . 9 1 A HOH 2078 ? H HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 14 ? A GLU 14 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2021 ? 1_555 91.5 ? 2 OE2 ? A GLU 14 ? A GLU 14 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2023 ? 1_555 91.5 ? 3 O ? H HOH . ? A HOH 2021 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2023 ? 1_555 94.1 ? 4 OE2 ? A GLU 14 ? A GLU 14 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2027 ? 1_555 85.7 ? 5 O ? H HOH . ? A HOH 2021 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2027 ? 1_555 90.5 ? 6 O ? H HOH . ? A HOH 2023 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2027 ? 1_555 174.6 ? 7 OE2 ? A GLU 14 ? A GLU 14 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2028 ? 1_555 91.8 ? 8 O ? H HOH . ? A HOH 2021 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2028 ? 1_555 174.7 ? 9 O ? H HOH . ? A HOH 2023 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2028 ? 1_555 81.8 ? 10 O ? H HOH . ? A HOH 2027 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2028 ? 1_555 93.8 ? 11 OE2 ? A GLU 14 ? A GLU 14 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2079 ? 1_555 176.5 ? 12 O ? H HOH . ? A HOH 2021 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2079 ? 1_555 85.3 ? 13 O ? H HOH . ? A HOH 2023 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2079 ? 1_555 90.3 ? 14 O ? H HOH . ? A HOH 2027 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2079 ? 1_555 92.8 ? 15 O ? H HOH . ? A HOH 2028 ? 1_555 MG ? F MG . ? A MG 105 ? 1_555 O ? H HOH . ? A HOH 2079 ? 1_555 91.4 ? 16 OD2 ? A ASP 41 ? A ASP 41 ? 80_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2059 ? 80_555 94.5 ? 17 OD2 ? A ASP 41 ? A ASP 41 ? 80_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2072 ? 1_555 87.8 ? 18 O ? H HOH . ? A HOH 2059 ? 80_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2072 ? 1_555 79.7 ? 19 OD2 ? A ASP 41 ? A ASP 41 ? 80_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2073 ? 1_555 173.5 ? 20 O ? H HOH . ? A HOH 2059 ? 80_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2073 ? 1_555 89.7 ? 21 O ? H HOH . ? A HOH 2072 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2073 ? 1_555 97.9 ? 22 OD2 ? A ASP 41 ? A ASP 41 ? 80_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 82.8 ? 23 O ? H HOH . ? A HOH 2059 ? 80_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 177.3 ? 24 O ? H HOH . ? A HOH 2072 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 100.7 ? 25 O ? H HOH . ? A HOH 2073 ? 1_555 NA ? B NA . ? A NA 101 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 92.9 ? 26 CL ? G CL . ? A CL 106 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 CL ? G CL . ? A CL 106 ? 59_555 0.0 ? 27 CL ? G CL . ? A CL 106 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 CL ? G CL . ? A CL 106 ? 80_555 0.0 ? 28 CL ? G CL . ? A CL 106 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 CL ? G CL . ? A CL 106 ? 80_555 0.0 ? 29 CL ? G CL . ? A CL 106 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 59_555 96.5 ? 30 CL ? G CL . ? A CL 106 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 59_555 96.5 ? 31 CL ? G CL . ? A CL 106 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 59_555 96.5 ? 32 CL ? G CL . ? A CL 106 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 80_555 96.5 ? 33 CL ? G CL . ? A CL 106 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 80_555 96.5 ? 34 CL ? G CL . ? A CL 106 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 80_555 96.5 ? 35 O ? H HOH . ? A HOH 2008 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 80_555 118.7 ? 36 CL ? G CL . ? A CL 106 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 1_555 96.5 ? 37 CL ? G CL . ? A CL 106 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 1_555 96.5 ? 38 CL ? G CL . ? A CL 106 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 1_555 96.5 ? 39 O ? H HOH . ? A HOH 2008 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 1_555 118.7 ? 40 O ? H HOH . ? A HOH 2008 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2008 ? 1_555 118.7 ? 41 CL ? G CL . ? A CL 106 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 1_555 180.0 ? 42 CL ? G CL . ? A CL 106 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 1_555 180.0 ? 43 CL ? G CL . ? A CL 106 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 1_555 180.0 ? 44 O ? H HOH . ? A HOH 2008 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 1_555 83.5 ? 45 O ? H HOH . ? A HOH 2008 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 1_555 83.5 ? 46 O ? H HOH . ? A HOH 2008 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 1_555 83.5 ? 47 CL ? G CL . ? A CL 106 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 59_555 180.0 ? 48 CL ? G CL . ? A CL 106 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 59_555 180.0 ? 49 CL ? G CL . ? A CL 106 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 59_555 180.0 ? 50 O ? H HOH . ? A HOH 2008 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 59_555 83.5 ? 51 O ? H HOH . ? A HOH 2008 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 59_555 83.5 ? 52 O ? H HOH . ? A HOH 2008 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 59_555 83.5 ? 53 O ? H HOH . ? A HOH 2078 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 59_555 0.0 ? 54 CL ? G CL . ? A CL 106 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 180.0 ? 55 CL ? G CL . ? A CL 106 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 180.0 ? 56 CL ? G CL . ? A CL 106 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 180.0 ? 57 O ? H HOH . ? A HOH 2008 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 83.5 ? 58 O ? H HOH . ? A HOH 2008 ? 80_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 83.5 ? 59 O ? H HOH . ? A HOH 2008 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 83.5 ? 60 O ? H HOH . ? A HOH 2078 ? 1_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 0.0 ? 61 O ? H HOH . ? A HOH 2078 ? 59_555 NA ? E NA . ? A NA 104 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 0.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-05-29 2 'Structure model' 1 1 2019-10-16 3 'Structure model' 1 2 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' Other 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_database_status 2 2 'Structure model' pdbx_struct_special_symmetry 3 2 'Structure model' reflns 4 2 'Structure model' reflns_shell 5 3 'Structure model' chem_comp_atom 6 3 'Structure model' chem_comp_bond 7 3 'Structure model' database_2 8 3 'Structure model' pdbx_initial_refinement_model 9 3 'Structure model' pdbx_struct_conn_angle 10 3 'Structure model' struct_conn 11 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_status.status_code_sf' 2 2 'Structure model' '_reflns.pdbx_Rmerge_I_obs' 3 2 'Structure model' '_reflns_shell.Rmerge_I_obs' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 25 3 'Structure model' '_pdbx_struct_conn_angle.value' 26 3 'Structure model' '_struct_conn.pdbx_dist_value' 27 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 3 'Structure model' '_struct_conn.ptnr1_symmetry' 34 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 40 3 'Structure model' '_struct_conn.ptnr2_symmetry' 41 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 42 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 43 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.6.0117 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 REFMAC phasing . ? 4 # _pdbx_entry_details.entry_id 4B2H _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, GLU 45 TO ALA' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;[4-(7,8-DIMETHYL-2,4-DIOXO-3, 4-DIHYDROBENZO[G]PTERIDIN-10(2H)-YL)PROPYL]CARBAMIC ACID (C3F): ISOALLOXAZINE RING CONNECTED TO DNA VIA PROPYL CHAIN ; _pdbx_entry_details.sequence_details ;MUTATION OF E45A AND DELETION OF GLU50 AND GLU51 OE3073R AT HALOLEX DATABASE ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2035 ? ? O A HOH 2036 ? ? 1.82 2 1 O A HOH 2004 ? ? O A HOH 2005 ? ? 2.07 3 1 O A HOH 2066 ? ? O A HOH 2067 ? ? 2.12 4 1 O A HOH 2054 ? ? O A HOH 2055 ? ? 2.18 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 2050 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 2059 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 80_555 _pdbx_validate_symm_contact.dist 1.91 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG1 A VAL 6 ? A CB A VAL 6 ? A CG2 A VAL 6 ? A 120.84 110.90 9.94 1.60 N 2 1 OE1 A GLU 14 ? ? CD A GLU 14 ? ? OE2 A GLU 14 ? ? 130.67 123.30 7.37 1.20 N 3 1 CB A ASP 21 ? ? CG A ASP 21 ? ? OD1 A ASP 21 ? ? 125.43 118.30 7.13 0.90 N 4 1 CB A ASP 22 ? ? CG A ASP 22 ? ? OD2 A ASP 22 ? ? 128.11 118.30 9.81 0.90 N 5 1 CB A ASP 25 ? ? CG A ASP 25 ? ? OD2 A ASP 25 ? ? 112.08 118.30 -6.22 0.90 N 6 1 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH2 A ARG 26 ? ? 115.48 120.30 -4.82 0.50 N 7 1 CB A TYR 52 ? ? CG A TYR 52 ? ? CD2 A TYR 52 ? ? 115.31 121.00 -5.69 0.60 N 8 1 CB A TYR 52 ? ? CG A TYR 52 ? ? CD1 A TYR 52 ? ? 124.93 121.00 3.93 0.60 N 9 1 CB A PHE 60 ? ? CG A PHE 60 ? ? CD1 A PHE 60 ? ? 115.13 120.80 -5.67 0.70 N 10 1 CB A ASP 63 ? ? CG A ASP 63 ? ? OD1 A ASP 63 ? ? 111.63 118.30 -6.67 0.90 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLY 64 ? A GLY 64 3 1 Y 1 A SER 65 ? A SER 65 4 1 Y 1 A GLN 66 ? A GLN 66 5 1 Y 1 A LEU 67 ? A LEU 67 6 1 Y 1 A GLU 68 ? A GLU 68 7 1 Y 1 A HIS 69 ? A HIS 69 8 1 Y 1 A HIS 70 ? A HIS 70 9 1 Y 1 A HIS 71 ? A HIS 71 10 1 Y 1 A HIS 72 ? A HIS 72 11 1 Y 1 A HIS 73 ? A HIS 73 12 1 Y 1 A HIS 74 ? A HIS 74 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C3F O4 O N N 74 C3F C4 C N N 75 C3F N3 N N N 76 C3F C2 C N N 77 C3F O2 O N N 78 C3F N1 N N N 79 C3F C4A C N N 80 C3F C10 C N N 81 C3F N5 N N N 82 C3F C5A C Y N 83 C3F C6 C Y N 84 C3F C7 C Y N 85 C3F C7M C N N 86 C3F C8 C Y N 87 C3F C8M C N N 88 C3F C9 C Y N 89 C3F C9A C Y N 90 C3F N10 N N N 91 C3F "C1'" C N N 92 C3F "C2'" C N N 93 C3F "C3'" C N N 94 C3F "C5'" C N N 95 C3F "N1'" N N N 96 C3F "O2'" O N N 97 C3F "O1'" O N N 98 C3F H3 H N N 99 C3F H6 H N N 100 C3F H7M1 H N N 101 C3F H7M2 H N N 102 C3F H7M3 H N N 103 C3F H8M1 H N N 104 C3F H8M2 H N N 105 C3F H8M3 H N N 106 C3F H9 H N N 107 C3F "H1'1" H N N 108 C3F "H1'2" H N N 109 C3F "H2'1" H N N 110 C3F "H2'2" H N N 111 C3F "H3'1" H N N 112 C3F "H3'2" H N N 113 C3F "H1'" H N N 114 C3F "H2'" H N N 115 CL CL CL N N 116 GLN N N N N 117 GLN CA C N S 118 GLN C C N N 119 GLN O O N N 120 GLN CB C N N 121 GLN CG C N N 122 GLN CD C N N 123 GLN OE1 O N N 124 GLN NE2 N N N 125 GLN OXT O N N 126 GLN H H N N 127 GLN H2 H N N 128 GLN HA H N N 129 GLN HB2 H N N 130 GLN HB3 H N N 131 GLN HG2 H N N 132 GLN HG3 H N N 133 GLN HE21 H N N 134 GLN HE22 H N N 135 GLN HXT H N N 136 GLU N N N N 137 GLU CA C N S 138 GLU C C N N 139 GLU O O N N 140 GLU CB C N N 141 GLU CG C N N 142 GLU CD C N N 143 GLU OE1 O N N 144 GLU OE2 O N N 145 GLU OXT O N N 146 GLU H H N N 147 GLU H2 H N N 148 GLU HA H N N 149 GLU HB2 H N N 150 GLU HB3 H N N 151 GLU HG2 H N N 152 GLU HG3 H N N 153 GLU HE2 H N N 154 GLU HXT H N N 155 GLY N N N N 156 GLY CA C N N 157 GLY C C N N 158 GLY O O N N 159 GLY OXT O N N 160 GLY H H N N 161 GLY H2 H N N 162 GLY HA2 H N N 163 GLY HA3 H N N 164 GLY HXT H N N 165 HIS N N N N 166 HIS CA C N S 167 HIS C C N N 168 HIS O O N N 169 HIS CB C N N 170 HIS CG C Y N 171 HIS ND1 N Y N 172 HIS CD2 C Y N 173 HIS CE1 C Y N 174 HIS NE2 N Y N 175 HIS OXT O N N 176 HIS H H N N 177 HIS H2 H N N 178 HIS HA H N N 179 HIS HB2 H N N 180 HIS HB3 H N N 181 HIS HD1 H N N 182 HIS HD2 H N N 183 HIS HE1 H N N 184 HIS HE2 H N N 185 HIS HXT H N N 186 HOH O O N N 187 HOH H1 H N N 188 HOH H2 H N N 189 ILE N N N N 190 ILE CA C N S 191 ILE C C N N 192 ILE O O N N 193 ILE CB C N S 194 ILE CG1 C N N 195 ILE CG2 C N N 196 ILE CD1 C N N 197 ILE OXT O N N 198 ILE H H N N 199 ILE H2 H N N 200 ILE HA H N N 201 ILE HB H N N 202 ILE HG12 H N N 203 ILE HG13 H N N 204 ILE HG21 H N N 205 ILE HG22 H N N 206 ILE HG23 H N N 207 ILE HD11 H N N 208 ILE HD12 H N N 209 ILE HD13 H N N 210 ILE HXT H N N 211 LEU N N N N 212 LEU CA C N S 213 LEU C C N N 214 LEU O O N N 215 LEU CB C N N 216 LEU CG C N N 217 LEU CD1 C N N 218 LEU CD2 C N N 219 LEU OXT O N N 220 LEU H H N N 221 LEU H2 H N N 222 LEU HA H N N 223 LEU HB2 H N N 224 LEU HB3 H N N 225 LEU HG H N N 226 LEU HD11 H N N 227 LEU HD12 H N N 228 LEU HD13 H N N 229 LEU HD21 H N N 230 LEU HD22 H N N 231 LEU HD23 H N N 232 LEU HXT H N N 233 LYS N N N N 234 LYS CA C N S 235 LYS C C N N 236 LYS O O N N 237 LYS CB C N N 238 LYS CG C N N 239 LYS CD C N N 240 LYS CE C N N 241 LYS NZ N N N 242 LYS OXT O N N 243 LYS H H N N 244 LYS H2 H N N 245 LYS HA H N N 246 LYS HB2 H N N 247 LYS HB3 H N N 248 LYS HG2 H N N 249 LYS HG3 H N N 250 LYS HD2 H N N 251 LYS HD3 H N N 252 LYS HE2 H N N 253 LYS HE3 H N N 254 LYS HZ1 H N N 255 LYS HZ2 H N N 256 LYS HZ3 H N N 257 LYS HXT H N N 258 MET N N N N 259 MET CA C N S 260 MET C C N N 261 MET O O N N 262 MET CB C N N 263 MET CG C N N 264 MET SD S N N 265 MET CE C N N 266 MET OXT O N N 267 MET H H N N 268 MET H2 H N N 269 MET HA H N N 270 MET HB2 H N N 271 MET HB3 H N N 272 MET HG2 H N N 273 MET HG3 H N N 274 MET HE1 H N N 275 MET HE2 H N N 276 MET HE3 H N N 277 MET HXT H N N 278 MG MG MG N N 279 NA NA NA N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 SO4 S S N N 318 SO4 O1 O N N 319 SO4 O2 O N N 320 SO4 O3 O N N 321 SO4 O4 O N N 322 THR N N N N 323 THR CA C N S 324 THR C C N N 325 THR O O N N 326 THR CB C N R 327 THR OG1 O N N 328 THR CG2 C N N 329 THR OXT O N N 330 THR H H N N 331 THR H2 H N N 332 THR HA H N N 333 THR HB H N N 334 THR HG1 H N N 335 THR HG21 H N N 336 THR HG22 H N N 337 THR HG23 H N N 338 THR HXT H N N 339 TRP N N N N 340 TRP CA C N S 341 TRP C C N N 342 TRP O O N N 343 TRP CB C N N 344 TRP CG C Y N 345 TRP CD1 C Y N 346 TRP CD2 C Y N 347 TRP NE1 N Y N 348 TRP CE2 C Y N 349 TRP CE3 C Y N 350 TRP CZ2 C Y N 351 TRP CZ3 C Y N 352 TRP CH2 C Y N 353 TRP OXT O N N 354 TRP H H N N 355 TRP H2 H N N 356 TRP HA H N N 357 TRP HB2 H N N 358 TRP HB3 H N N 359 TRP HD1 H N N 360 TRP HE1 H N N 361 TRP HE3 H N N 362 TRP HZ2 H N N 363 TRP HZ3 H N N 364 TRP HH2 H N N 365 TRP HXT H N N 366 TYR N N N N 367 TYR CA C N S 368 TYR C C N N 369 TYR O O N N 370 TYR CB C N N 371 TYR CG C Y N 372 TYR CD1 C Y N 373 TYR CD2 C Y N 374 TYR CE1 C Y N 375 TYR CE2 C Y N 376 TYR CZ C Y N 377 TYR OH O N N 378 TYR OXT O N N 379 TYR H H N N 380 TYR H2 H N N 381 TYR HA H N N 382 TYR HB2 H N N 383 TYR HB3 H N N 384 TYR HD1 H N N 385 TYR HD2 H N N 386 TYR HE1 H N N 387 TYR HE2 H N N 388 TYR HH H N N 389 TYR HXT H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C3F O4 C4 doub N N 70 C3F C4 N3 sing N N 71 C3F C4 C4A sing N N 72 C3F N3 C2 sing N N 73 C3F C2 O2 doub N N 74 C3F C2 N1 sing N N 75 C3F N1 C10 doub N N 76 C3F C4A C10 sing N N 77 C3F C4A N5 doub N N 78 C3F C10 N10 sing N N 79 C3F N5 C5A sing N N 80 C3F C5A C6 sing Y N 81 C3F C5A C9A doub Y N 82 C3F C6 C7 doub Y N 83 C3F C7 C7M sing N N 84 C3F C7 C8 sing Y N 85 C3F C8 C8M sing N N 86 C3F C8 C9 doub Y N 87 C3F C9 C9A sing Y N 88 C3F C9A N10 sing N N 89 C3F N10 "C1'" sing N N 90 C3F "C1'" "C2'" sing N N 91 C3F "C2'" "C3'" sing N N 92 C3F "C3'" "N1'" sing N N 93 C3F "C5'" "O1'" doub N N 94 C3F "C5'" "O2'" sing N N 95 C3F "C5'" "N1'" sing N N 96 C3F N3 H3 sing N N 97 C3F C6 H6 sing N N 98 C3F C7M H7M1 sing N N 99 C3F C7M H7M2 sing N N 100 C3F C7M H7M3 sing N N 101 C3F C8M H8M1 sing N N 102 C3F C8M H8M2 sing N N 103 C3F C8M H8M3 sing N N 104 C3F C9 H9 sing N N 105 C3F "C1'" "H1'1" sing N N 106 C3F "C1'" "H1'2" sing N N 107 C3F "C2'" "H2'1" sing N N 108 C3F "C2'" "H2'2" sing N N 109 C3F "C3'" "H3'1" sing N N 110 C3F "C3'" "H3'2" sing N N 111 C3F "N1'" "H1'" sing N N 112 C3F "H2'" "O2'" sing N N 113 GLN N CA sing N N 114 GLN N H sing N N 115 GLN N H2 sing N N 116 GLN CA C sing N N 117 GLN CA CB sing N N 118 GLN CA HA sing N N 119 GLN C O doub N N 120 GLN C OXT sing N N 121 GLN CB CG sing N N 122 GLN CB HB2 sing N N 123 GLN CB HB3 sing N N 124 GLN CG CD sing N N 125 GLN CG HG2 sing N N 126 GLN CG HG3 sing N N 127 GLN CD OE1 doub N N 128 GLN CD NE2 sing N N 129 GLN NE2 HE21 sing N N 130 GLN NE2 HE22 sing N N 131 GLN OXT HXT sing N N 132 GLU N CA sing N N 133 GLU N H sing N N 134 GLU N H2 sing N N 135 GLU CA C sing N N 136 GLU CA CB sing N N 137 GLU CA HA sing N N 138 GLU C O doub N N 139 GLU C OXT sing N N 140 GLU CB CG sing N N 141 GLU CB HB2 sing N N 142 GLU CB HB3 sing N N 143 GLU CG CD sing N N 144 GLU CG HG2 sing N N 145 GLU CG HG3 sing N N 146 GLU CD OE1 doub N N 147 GLU CD OE2 sing N N 148 GLU OE2 HE2 sing N N 149 GLU OXT HXT sing N N 150 GLY N CA sing N N 151 GLY N H sing N N 152 GLY N H2 sing N N 153 GLY CA C sing N N 154 GLY CA HA2 sing N N 155 GLY CA HA3 sing N N 156 GLY C O doub N N 157 GLY C OXT sing N N 158 GLY OXT HXT sing N N 159 HIS N CA sing N N 160 HIS N H sing N N 161 HIS N H2 sing N N 162 HIS CA C sing N N 163 HIS CA CB sing N N 164 HIS CA HA sing N N 165 HIS C O doub N N 166 HIS C OXT sing N N 167 HIS CB CG sing N N 168 HIS CB HB2 sing N N 169 HIS CB HB3 sing N N 170 HIS CG ND1 sing Y N 171 HIS CG CD2 doub Y N 172 HIS ND1 CE1 doub Y N 173 HIS ND1 HD1 sing N N 174 HIS CD2 NE2 sing Y N 175 HIS CD2 HD2 sing N N 176 HIS CE1 NE2 sing Y N 177 HIS CE1 HE1 sing N N 178 HIS NE2 HE2 sing N N 179 HIS OXT HXT sing N N 180 HOH O H1 sing N N 181 HOH O H2 sing N N 182 ILE N CA sing N N 183 ILE N H sing N N 184 ILE N H2 sing N N 185 ILE CA C sing N N 186 ILE CA CB sing N N 187 ILE CA HA sing N N 188 ILE C O doub N N 189 ILE C OXT sing N N 190 ILE CB CG1 sing N N 191 ILE CB CG2 sing N N 192 ILE CB HB sing N N 193 ILE CG1 CD1 sing N N 194 ILE CG1 HG12 sing N N 195 ILE CG1 HG13 sing N N 196 ILE CG2 HG21 sing N N 197 ILE CG2 HG22 sing N N 198 ILE CG2 HG23 sing N N 199 ILE CD1 HD11 sing N N 200 ILE CD1 HD12 sing N N 201 ILE CD1 HD13 sing N N 202 ILE OXT HXT sing N N 203 LEU N CA sing N N 204 LEU N H sing N N 205 LEU N H2 sing N N 206 LEU CA C sing N N 207 LEU CA CB sing N N 208 LEU CA HA sing N N 209 LEU C O doub N N 210 LEU C OXT sing N N 211 LEU CB CG sing N N 212 LEU CB HB2 sing N N 213 LEU CB HB3 sing N N 214 LEU CG CD1 sing N N 215 LEU CG CD2 sing N N 216 LEU CG HG sing N N 217 LEU CD1 HD11 sing N N 218 LEU CD1 HD12 sing N N 219 LEU CD1 HD13 sing N N 220 LEU CD2 HD21 sing N N 221 LEU CD2 HD22 sing N N 222 LEU CD2 HD23 sing N N 223 LEU OXT HXT sing N N 224 LYS N CA sing N N 225 LYS N H sing N N 226 LYS N H2 sing N N 227 LYS CA C sing N N 228 LYS CA CB sing N N 229 LYS CA HA sing N N 230 LYS C O doub N N 231 LYS C OXT sing N N 232 LYS CB CG sing N N 233 LYS CB HB2 sing N N 234 LYS CB HB3 sing N N 235 LYS CG CD sing N N 236 LYS CG HG2 sing N N 237 LYS CG HG3 sing N N 238 LYS CD CE sing N N 239 LYS CD HD2 sing N N 240 LYS CD HD3 sing N N 241 LYS CE NZ sing N N 242 LYS CE HE2 sing N N 243 LYS CE HE3 sing N N 244 LYS NZ HZ1 sing N N 245 LYS NZ HZ2 sing N N 246 LYS NZ HZ3 sing N N 247 LYS OXT HXT sing N N 248 MET N CA sing N N 249 MET N H sing N N 250 MET N H2 sing N N 251 MET CA C sing N N 252 MET CA CB sing N N 253 MET CA HA sing N N 254 MET C O doub N N 255 MET C OXT sing N N 256 MET CB CG sing N N 257 MET CB HB2 sing N N 258 MET CB HB3 sing N N 259 MET CG SD sing N N 260 MET CG HG2 sing N N 261 MET CG HG3 sing N N 262 MET SD CE sing N N 263 MET CE HE1 sing N N 264 MET CE HE2 sing N N 265 MET CE HE3 sing N N 266 MET OXT HXT sing N N 267 PHE N CA sing N N 268 PHE N H sing N N 269 PHE N H2 sing N N 270 PHE CA C sing N N 271 PHE CA CB sing N N 272 PHE CA HA sing N N 273 PHE C O doub N N 274 PHE C OXT sing N N 275 PHE CB CG sing N N 276 PHE CB HB2 sing N N 277 PHE CB HB3 sing N N 278 PHE CG CD1 doub Y N 279 PHE CG CD2 sing Y N 280 PHE CD1 CE1 sing Y N 281 PHE CD1 HD1 sing N N 282 PHE CD2 CE2 doub Y N 283 PHE CD2 HD2 sing N N 284 PHE CE1 CZ doub Y N 285 PHE CE1 HE1 sing N N 286 PHE CE2 CZ sing Y N 287 PHE CE2 HE2 sing N N 288 PHE CZ HZ sing N N 289 PHE OXT HXT sing N N 290 SER N CA sing N N 291 SER N H sing N N 292 SER N H2 sing N N 293 SER CA C sing N N 294 SER CA CB sing N N 295 SER CA HA sing N N 296 SER C O doub N N 297 SER C OXT sing N N 298 SER CB OG sing N N 299 SER CB HB2 sing N N 300 SER CB HB3 sing N N 301 SER OG HG sing N N 302 SER OXT HXT sing N N 303 SO4 S O1 doub N N 304 SO4 S O2 doub N N 305 SO4 S O3 sing N N 306 SO4 S O4 sing N N 307 THR N CA sing N N 308 THR N H sing N N 309 THR N H2 sing N N 310 THR CA C sing N N 311 THR CA CB sing N N 312 THR CA HA sing N N 313 THR C O doub N N 314 THR C OXT sing N N 315 THR CB OG1 sing N N 316 THR CB CG2 sing N N 317 THR CB HB sing N N 318 THR OG1 HG1 sing N N 319 THR CG2 HG21 sing N N 320 THR CG2 HG22 sing N N 321 THR CG2 HG23 sing N N 322 THR OXT HXT sing N N 323 TRP N CA sing N N 324 TRP N H sing N N 325 TRP N H2 sing N N 326 TRP CA C sing N N 327 TRP CA CB sing N N 328 TRP CA HA sing N N 329 TRP C O doub N N 330 TRP C OXT sing N N 331 TRP CB CG sing N N 332 TRP CB HB2 sing N N 333 TRP CB HB3 sing N N 334 TRP CG CD1 doub Y N 335 TRP CG CD2 sing Y N 336 TRP CD1 NE1 sing Y N 337 TRP CD1 HD1 sing N N 338 TRP CD2 CE2 doub Y N 339 TRP CD2 CE3 sing Y N 340 TRP NE1 CE2 sing Y N 341 TRP NE1 HE1 sing N N 342 TRP CE2 CZ2 sing Y N 343 TRP CE3 CZ3 doub Y N 344 TRP CE3 HE3 sing N N 345 TRP CZ2 CH2 doub Y N 346 TRP CZ2 HZ2 sing N N 347 TRP CZ3 CH2 sing Y N 348 TRP CZ3 HZ3 sing N N 349 TRP CH2 HH2 sing N N 350 TRP OXT HXT sing N N 351 TYR N CA sing N N 352 TYR N H sing N N 353 TYR N H2 sing N N 354 TYR CA C sing N N 355 TYR CA CB sing N N 356 TYR CA HA sing N N 357 TYR C O doub N N 358 TYR C OXT sing N N 359 TYR CB CG sing N N 360 TYR CB HB2 sing N N 361 TYR CB HB3 sing N N 362 TYR CG CD1 doub Y N 363 TYR CG CD2 sing Y N 364 TYR CD1 CE1 sing Y N 365 TYR CD1 HD1 sing N N 366 TYR CD2 CE2 doub Y N 367 TYR CD2 HD2 sing N N 368 TYR CE1 CZ doub Y N 369 TYR CE1 HE1 sing N N 370 TYR CE2 CZ sing Y N 371 TYR CE2 HE2 sing N N 372 TYR CZ OH sing N N 373 TYR OH HH sing N N 374 TYR OXT HXT sing N N 375 VAL N CA sing N N 376 VAL N H sing N N 377 VAL N H2 sing N N 378 VAL CA C sing N N 379 VAL CA CB sing N N 380 VAL CA HA sing N N 381 VAL C O doub N N 382 VAL C OXT sing N N 383 VAL CB CG1 sing N N 384 VAL CB CG2 sing N N 385 VAL CB HB sing N N 386 VAL CG1 HG11 sing N N 387 VAL CG1 HG12 sing N N 388 VAL CG1 HG13 sing N N 389 VAL CG2 HG21 sing N N 390 VAL CG2 HG22 sing N N 391 VAL CG2 HG23 sing N N 392 VAL OXT HXT sing N N 393 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'SULFATE ION' SO4 4 '3-[7,8-dimethyl-2,4-bis(oxidanylidene)benzo[g]pteridin-10-yl]propylcarbamic acid' C3F 5 'MAGNESIUM ION' MG 6 'CHLORIDE ION' CL 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2CCC _pdbx_initial_refinement_model.details 'PDB ENTRY 2CCC' #