data_4B5F # _entry.id 4B5F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4B5F pdb_00004b5f 10.2210/pdb4b5f/pdb PDBE EBI-53620 ? ? WWPDB D_1290053620 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-17 2 'Structure model' 1 1 2012-11-07 3 'Structure model' 1 2 2018-02-28 4 'Structure model' 1 3 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' citation_author 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_database_status 7 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_abbrev' 2 3 'Structure model' '_citation.journal_id_ISSN' 3 3 'Structure model' '_citation.page_last' 4 3 'Structure model' '_citation.pdbx_database_id_DOI' 5 3 'Structure model' '_citation.title' 6 3 'Structure model' '_citation_author.name' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' 9 4 'Structure model' '_pdbx_database_status.status_code_sf' 10 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4B5F _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-08-03 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4B5G unspecified 'SUBSTRATE BOUND NEISSERIA AP ENDONUCLEASE IN ABSENCE OF METAL IONS (CRYSTAL FORM 2)' PDB 4B5H unspecified 'SUBSTATE BOUND INACTIVE MUTANT OF NEISSERIA AP ENDONUCLEASE IN PRESENCE OF METAL IONS' PDB 4B5I unspecified 'PRODUCT COMPLEX OF NEISSERIA AP ENDONUCLEASE IN PRESENCE OF METAL IONS' PDB 4B5J unspecified 'NEISSERIA AP ENDONUCLEASE BOUND TO THE SUBSTRATE WITH AN ORPHAN ADENINE BASE' PDB 4B5M unspecified 'NEISSERIA AP ENDONUCLEASE BOUND TO THE SUBSTRATE WITH A CYTOSINE ORPHAN BASE' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lu, D.' 1 'Silhan, J.' 2 'MacDonald, J.T.' 3 'Carpenter, E.P.' 4 'Jensen, K.' 5 'Tang, C.M.' 6 'Baldwin, G.S.' 7 'Freemont, P.S.' 8 # _citation.id primary _citation.title 'Structural basis for the recognition and cleavage of abasic DNA in Neisseria meningitidis.' _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_volume 109 _citation.page_first 16852 _citation.page_last 16857 _citation.year 2012 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 1091-6490 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23035246 _citation.pdbx_database_id_DOI 10.1073/pnas.1206563109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lu, D.' 1 ? primary 'Silhan, J.' 2 ? primary 'MacDonald, J.T.' 3 ? primary 'Carpenter, E.P.' 4 ? primary 'Jensen, K.' 5 ? primary 'Tang, C.M.' 6 ? primary 'Baldwin, G.S.' 7 ? primary 'Freemont, P.S.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PUTATIVE EXODEOXYRIBONUCLEASE' 29699.594 1 3.1.11.2 ? ? ? 2 polymer syn "5'-D(*GP*CP*TP*AP*CP*3DRP*GP*AP*TP*CP*GP)-3'" 3225.100 1 ? ? ? ? 3 polymer syn "5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP*CP)-3'" 3374.210 1 ? ? ? ? 4 water nat water 18.015 326 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'NEISSERIA AP ENDONUCLEASE' 2 'DNA 11MER CONTAINING ABASIC RESIDUE' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNV QIGMGIEEFDREGRFVRCDFGRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYK DEKFSDHAPLVVEYDYAAE ; ;MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNV QIGMGIEEFDREGRFVRCDFGRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYK DEKFSDHAPLVVEYDYAAE ; A ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DT)(DA)(DC)(3DR)(DG)(DA)(DT)(DC)(DG)' GCTACNGATCG U ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DA)(DT)(DC)(DG)(DG)(DT)(DA)(DG)(DC)' CGATCGGTAGC V ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 LYS n 1 4 ILE n 1 5 ILE n 1 6 SER n 1 7 ALA n 1 8 ASN n 1 9 VAL n 1 10 ASN n 1 11 GLY n 1 12 ILE n 1 13 ARG n 1 14 SER n 1 15 ALA n 1 16 TYR n 1 17 LYS n 1 18 LYS n 1 19 GLY n 1 20 PHE n 1 21 TYR n 1 22 GLU n 1 23 TYR n 1 24 ILE n 1 25 ALA n 1 26 ALA n 1 27 SER n 1 28 GLY n 1 29 ALA n 1 30 ASP n 1 31 ILE n 1 32 VAL n 1 33 CYS n 1 34 VAL n 1 35 GLN n 1 36 GLU n 1 37 LEU n 1 38 LYS n 1 39 ALA n 1 40 GLN n 1 41 GLU n 1 42 ALA n 1 43 ASP n 1 44 LEU n 1 45 SER n 1 46 ALA n 1 47 ASP n 1 48 MET n 1 49 LYS n 1 50 ASN n 1 51 PRO n 1 52 HIS n 1 53 GLY n 1 54 MET n 1 55 HIS n 1 56 GLY n 1 57 HIS n 1 58 TRP n 1 59 HIS n 1 60 CYS n 1 61 ALA n 1 62 GLU n 1 63 LYS n 1 64 ARG n 1 65 GLY n 1 66 TYR n 1 67 SER n 1 68 GLY n 1 69 VAL n 1 70 ALA n 1 71 VAL n 1 72 TYR n 1 73 SER n 1 74 LYS n 1 75 ARG n 1 76 LYS n 1 77 PRO n 1 78 ASP n 1 79 ASN n 1 80 VAL n 1 81 GLN n 1 82 ILE n 1 83 GLY n 1 84 MET n 1 85 GLY n 1 86 ILE n 1 87 GLU n 1 88 GLU n 1 89 PHE n 1 90 ASP n 1 91 ARG n 1 92 GLU n 1 93 GLY n 1 94 ARG n 1 95 PHE n 1 96 VAL n 1 97 ARG n 1 98 CYS n 1 99 ASP n 1 100 PHE n 1 101 GLY n 1 102 ARG n 1 103 LEU n 1 104 SER n 1 105 VAL n 1 106 ILE n 1 107 SER n 1 108 LEU n 1 109 TYR n 1 110 LEU n 1 111 PRO n 1 112 SER n 1 113 GLY n 1 114 SER n 1 115 SER n 1 116 ALA n 1 117 GLU n 1 118 GLU n 1 119 ARG n 1 120 GLN n 1 121 GLN n 1 122 VAL n 1 123 LYS n 1 124 TYR n 1 125 ARG n 1 126 PHE n 1 127 LEU n 1 128 ASP n 1 129 ALA n 1 130 PHE n 1 131 TYR n 1 132 PRO n 1 133 MET n 1 134 LEU n 1 135 GLU n 1 136 ALA n 1 137 MET n 1 138 LYS n 1 139 ASN n 1 140 GLU n 1 141 GLY n 1 142 ARG n 1 143 ASP n 1 144 ILE n 1 145 VAL n 1 146 VAL n 1 147 CYS n 1 148 GLY n 1 149 ASP n 1 150 TRP n 1 151 ASN n 1 152 ILE n 1 153 ALA n 1 154 HIS n 1 155 GLN n 1 156 ASN n 1 157 ILE n 1 158 ASP n 1 159 LEU n 1 160 LYS n 1 161 ASN n 1 162 TRP n 1 163 LYS n 1 164 GLY n 1 165 ASN n 1 166 GLN n 1 167 LYS n 1 168 ASN n 1 169 SER n 1 170 GLY n 1 171 PHE n 1 172 LEU n 1 173 PRO n 1 174 GLU n 1 175 GLU n 1 176 ARG n 1 177 GLU n 1 178 TRP n 1 179 ILE n 1 180 GLY n 1 181 LYS n 1 182 VAL n 1 183 ILE n 1 184 HIS n 1 185 LYS n 1 186 LEU n 1 187 GLY n 1 188 TRP n 1 189 THR n 1 190 ASP n 1 191 MET n 1 192 TRP n 1 193 ARG n 1 194 THR n 1 195 LEU n 1 196 TYR n 1 197 PRO n 1 198 ASP n 1 199 VAL n 1 200 PRO n 1 201 GLY n 1 202 TYR n 1 203 THR n 1 204 TRP n 1 205 TRP n 1 206 SER n 1 207 ASN n 1 208 ARG n 1 209 GLY n 1 210 GLN n 1 211 ALA n 1 212 TYR n 1 213 ALA n 1 214 LYS n 1 215 ASP n 1 216 VAL n 1 217 GLY n 1 218 TRP n 1 219 ARG n 1 220 ILE n 1 221 ASP n 1 222 TYR n 1 223 GLN n 1 224 MET n 1 225 VAL n 1 226 THR n 1 227 PRO n 1 228 GLU n 1 229 LEU n 1 230 ALA n 1 231 ALA n 1 232 LYS n 1 233 ALA n 1 234 VAL n 1 235 SER n 1 236 ALA n 1 237 HIS n 1 238 VAL n 1 239 TYR n 1 240 LYS n 1 241 ASP n 1 242 GLU n 1 243 LYS n 1 244 PHE n 1 245 SER n 1 246 ASP n 1 247 HIS n 1 248 ALA n 1 249 PRO n 1 250 LEU n 1 251 VAL n 1 252 VAL n 1 253 GLU n 1 254 TYR n 1 255 ASP n 1 256 TYR n 1 257 ALA n 1 258 ALA n 1 259 GLU n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DA n 2 5 DC n 2 6 3DR n 2 7 DG n 2 8 DA n 2 9 DT n 2 10 DC n 2 11 DG n 3 1 DC n 3 2 DG n 3 3 DA n 3 4 DT n 3 5 DC n 3 6 DG n 3 7 DG n 3 8 DT n 3 9 DA n 3 10 DG n 3 11 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'NEISSERIA MENINGITIDIS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 487 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'NEISSERIA MENINGITIDIS' ? 487 ? 3 1 sample ? ? 'NEISSERIA MENINGITIDIS' ? 487 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3DR 'DNA linking' . "1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE" 'ABASIC DIDEOXYRIBOSE' 'C5 H11 O6 P' 198.111 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 TYR 21 21 21 TYR TYR A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 CYS 33 33 33 CYS CYS A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 MET 48 48 48 MET MET A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 MET 54 54 54 MET MET A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 HIS 59 59 59 HIS HIS A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 MET 84 84 84 MET MET A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 CYS 98 98 98 CYS CYS A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 TYR 124 124 124 TYR TYR A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 MET 133 133 133 MET MET A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 MET 137 137 137 MET MET A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 CYS 147 147 147 CYS CYS A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 TRP 150 150 150 TRP TRP A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ILE 152 152 152 ILE ILE A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 HIS 154 154 154 HIS HIS A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 ASP 158 158 158 ASP ASP A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 TRP 162 162 162 TRP TRP A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 GLN 166 166 166 GLN GLN A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 ASN 168 168 168 ASN ASN A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 ARG 176 176 176 ARG ARG A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 TRP 178 178 178 TRP TRP A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 HIS 184 184 184 HIS HIS A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 GLY 187 187 187 GLY GLY A . n A 1 188 TRP 188 188 188 TRP TRP A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 TRP 192 192 192 TRP TRP A . n A 1 193 ARG 193 193 193 ARG ARG A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 TYR 196 196 196 TYR TYR A . n A 1 197 PRO 197 197 197 PRO PRO A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 TYR 202 202 202 TYR TYR A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 TRP 204 204 204 TRP TRP A . n A 1 205 TRP 205 205 205 TRP TRP A . n A 1 206 SER 206 206 206 SER SER A . n A 1 207 ASN 207 207 207 ASN ASN A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 GLN 210 210 210 GLN GLN A . n A 1 211 ALA 211 211 211 ALA ALA A . n A 1 212 TYR 212 212 212 TYR TYR A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 ASP 215 215 215 ASP ASP A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 TRP 218 218 218 TRP TRP A . n A 1 219 ARG 219 219 219 ARG ARG A . n A 1 220 ILE 220 220 220 ILE ILE A . n A 1 221 ASP 221 221 221 ASP ASP A . n A 1 222 TYR 222 222 222 TYR TYR A . n A 1 223 GLN 223 223 223 GLN GLN A . n A 1 224 MET 224 224 224 MET MET A . n A 1 225 VAL 225 225 225 VAL VAL A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 PRO 227 227 227 PRO PRO A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 LYS 232 232 232 LYS LYS A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 VAL 234 234 234 VAL VAL A . n A 1 235 SER 235 235 235 SER SER A . n A 1 236 ALA 236 236 236 ALA ALA A . n A 1 237 HIS 237 237 237 HIS HIS A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 TYR 239 239 239 TYR TYR A . n A 1 240 LYS 240 240 240 LYS LYS A . n A 1 241 ASP 241 241 241 ASP ASP A . n A 1 242 GLU 242 242 242 GLU GLU A . n A 1 243 LYS 243 243 243 LYS LYS A . n A 1 244 PHE 244 244 244 PHE PHE A . n A 1 245 SER 245 245 245 SER SER A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 HIS 247 247 247 HIS HIS A . n A 1 248 ALA 248 248 248 ALA ALA A . n A 1 249 PRO 249 249 249 PRO PRO A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 GLU 253 253 253 GLU GLU A . n A 1 254 TYR 254 254 254 TYR TYR A . n A 1 255 ASP 255 255 255 ASP ASP A . n A 1 256 TYR 256 256 256 TYR TYR A . n A 1 257 ALA 257 257 ? ? ? A . n A 1 258 ALA 258 258 ? ? ? A . n A 1 259 GLU 259 259 ? ? ? A . n B 2 1 DG 1 31 31 DG DG U . n B 2 2 DC 2 32 32 DC DC U . n B 2 3 DT 3 33 33 DT DT U . n B 2 4 DA 4 34 34 DA DA U . n B 2 5 DC 5 35 35 DC DC U . n B 2 6 3DR 6 36 36 3DR 3DR U . n B 2 7 DG 7 37 37 DG DG U . n B 2 8 DA 8 38 38 DA DA U . n B 2 9 DT 9 39 39 DT DT U . n B 2 10 DC 10 40 40 DC DC U . n B 2 11 DG 11 41 41 DG DG U . n C 3 1 DC 1 42 42 DC DC V . n C 3 2 DG 2 43 43 DG DG V . n C 3 3 DA 3 44 44 DA DA V . n C 3 4 DT 4 45 45 DT DT V . n C 3 5 DC 5 46 46 DC DC V . n C 3 6 DG 6 47 47 DG DG V . n C 3 7 DG 7 48 48 DG DG V . n C 3 8 DT 8 49 49 DT DT V . n C 3 9 DA 9 50 50 DA DA V . n C 3 10 DG 10 51 51 DG DG V . n C 3 11 DC 11 52 52 DC DC V . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . D 4 HOH 113 2113 2113 HOH HOH A . D 4 HOH 114 2114 2114 HOH HOH A . D 4 HOH 115 2115 2115 HOH HOH A . D 4 HOH 116 2116 2116 HOH HOH A . D 4 HOH 117 2117 2117 HOH HOH A . D 4 HOH 118 2118 2118 HOH HOH A . D 4 HOH 119 2119 2119 HOH HOH A . D 4 HOH 120 2120 2120 HOH HOH A . D 4 HOH 121 2121 2121 HOH HOH A . D 4 HOH 122 2122 2122 HOH HOH A . D 4 HOH 123 2123 2123 HOH HOH A . D 4 HOH 124 2124 2124 HOH HOH A . D 4 HOH 125 2125 2125 HOH HOH A . D 4 HOH 126 2126 2126 HOH HOH A . D 4 HOH 127 2127 2127 HOH HOH A . D 4 HOH 128 2128 2128 HOH HOH A . D 4 HOH 129 2129 2129 HOH HOH A . D 4 HOH 130 2130 2130 HOH HOH A . D 4 HOH 131 2131 2131 HOH HOH A . D 4 HOH 132 2132 2132 HOH HOH A . D 4 HOH 133 2133 2133 HOH HOH A . D 4 HOH 134 2134 2134 HOH HOH A . D 4 HOH 135 2135 2135 HOH HOH A . D 4 HOH 136 2136 2136 HOH HOH A . D 4 HOH 137 2137 2137 HOH HOH A . D 4 HOH 138 2138 2138 HOH HOH A . D 4 HOH 139 2139 2139 HOH HOH A . D 4 HOH 140 2140 2140 HOH HOH A . D 4 HOH 141 2141 2141 HOH HOH A . D 4 HOH 142 2142 2142 HOH HOH A . D 4 HOH 143 2143 2143 HOH HOH A . D 4 HOH 144 2144 2144 HOH HOH A . D 4 HOH 145 2145 2145 HOH HOH A . D 4 HOH 146 2146 2146 HOH HOH A . D 4 HOH 147 2147 2147 HOH HOH A . D 4 HOH 148 2148 2148 HOH HOH A . D 4 HOH 149 2149 2149 HOH HOH A . D 4 HOH 150 2150 2150 HOH HOH A . D 4 HOH 151 2151 2151 HOH HOH A . D 4 HOH 152 2152 2152 HOH HOH A . D 4 HOH 153 2153 2153 HOH HOH A . D 4 HOH 154 2154 2154 HOH HOH A . D 4 HOH 155 2155 2155 HOH HOH A . D 4 HOH 156 2156 2156 HOH HOH A . D 4 HOH 157 2157 2157 HOH HOH A . D 4 HOH 158 2158 2158 HOH HOH A . D 4 HOH 159 2159 2159 HOH HOH A . D 4 HOH 160 2160 2160 HOH HOH A . D 4 HOH 161 2161 2161 HOH HOH A . D 4 HOH 162 2162 2162 HOH HOH A . D 4 HOH 163 2163 2163 HOH HOH A . D 4 HOH 164 2164 2164 HOH HOH A . D 4 HOH 165 2165 2165 HOH HOH A . D 4 HOH 166 2166 2166 HOH HOH A . D 4 HOH 167 2167 2167 HOH HOH A . D 4 HOH 168 2168 2168 HOH HOH A . D 4 HOH 169 2169 2169 HOH HOH A . D 4 HOH 170 2170 2170 HOH HOH A . D 4 HOH 171 2171 2171 HOH HOH A . D 4 HOH 172 2172 2172 HOH HOH A . D 4 HOH 173 2173 2173 HOH HOH A . D 4 HOH 174 2174 2174 HOH HOH A . D 4 HOH 175 2175 2175 HOH HOH A . D 4 HOH 176 2176 2176 HOH HOH A . D 4 HOH 177 2177 2177 HOH HOH A . D 4 HOH 178 2178 2178 HOH HOH A . D 4 HOH 179 2179 2179 HOH HOH A . D 4 HOH 180 2180 2180 HOH HOH A . D 4 HOH 181 2181 2181 HOH HOH A . D 4 HOH 182 2182 2182 HOH HOH A . D 4 HOH 183 2183 2183 HOH HOH A . D 4 HOH 184 2184 2184 HOH HOH A . D 4 HOH 185 2185 2185 HOH HOH A . D 4 HOH 186 2186 2186 HOH HOH A . D 4 HOH 187 2187 2187 HOH HOH A . D 4 HOH 188 2188 2188 HOH HOH A . D 4 HOH 189 2189 2189 HOH HOH A . D 4 HOH 190 2190 2190 HOH HOH A . D 4 HOH 191 2191 2191 HOH HOH A . D 4 HOH 192 2192 2192 HOH HOH A . D 4 HOH 193 2193 2193 HOH HOH A . D 4 HOH 194 2194 2194 HOH HOH A . D 4 HOH 195 2195 2195 HOH HOH A . D 4 HOH 196 2196 2196 HOH HOH A . D 4 HOH 197 2197 2197 HOH HOH A . D 4 HOH 198 2198 2198 HOH HOH A . D 4 HOH 199 2199 2199 HOH HOH A . D 4 HOH 200 2200 2200 HOH HOH A . D 4 HOH 201 2201 2201 HOH HOH A . D 4 HOH 202 2202 2202 HOH HOH A . D 4 HOH 203 2203 2203 HOH HOH A . D 4 HOH 204 2204 2204 HOH HOH A . D 4 HOH 205 2205 2205 HOH HOH A . D 4 HOH 206 2206 2206 HOH HOH A . D 4 HOH 207 2207 2207 HOH HOH A . D 4 HOH 208 2208 2208 HOH HOH A . D 4 HOH 209 2209 2209 HOH HOH A . D 4 HOH 210 2210 2210 HOH HOH A . D 4 HOH 211 2211 2211 HOH HOH A . D 4 HOH 212 2212 2212 HOH HOH A . D 4 HOH 213 2213 2213 HOH HOH A . D 4 HOH 214 2214 2214 HOH HOH A . D 4 HOH 215 2215 2215 HOH HOH A . D 4 HOH 216 2216 2216 HOH HOH A . D 4 HOH 217 2217 2217 HOH HOH A . D 4 HOH 218 2218 2218 HOH HOH A . D 4 HOH 219 2219 2219 HOH HOH A . D 4 HOH 220 2220 2220 HOH HOH A . D 4 HOH 221 2221 2221 HOH HOH A . D 4 HOH 222 2222 2222 HOH HOH A . D 4 HOH 223 2223 2223 HOH HOH A . D 4 HOH 224 2224 2224 HOH HOH A . D 4 HOH 225 2225 2225 HOH HOH A . D 4 HOH 226 2226 2226 HOH HOH A . D 4 HOH 227 2227 2227 HOH HOH A . D 4 HOH 228 2228 2228 HOH HOH A . D 4 HOH 229 2229 2229 HOH HOH A . D 4 HOH 230 2230 2230 HOH HOH A . D 4 HOH 231 2231 2231 HOH HOH A . D 4 HOH 232 2232 2232 HOH HOH A . D 4 HOH 233 2233 2233 HOH HOH A . D 4 HOH 234 2234 2234 HOH HOH A . D 4 HOH 235 2235 2235 HOH HOH A . D 4 HOH 236 2236 2236 HOH HOH A . D 4 HOH 237 2237 2237 HOH HOH A . D 4 HOH 238 2238 2238 HOH HOH A . D 4 HOH 239 2239 2239 HOH HOH A . D 4 HOH 240 2240 2240 HOH HOH A . D 4 HOH 241 2241 2241 HOH HOH A . D 4 HOH 242 2242 2242 HOH HOH A . D 4 HOH 243 2243 2243 HOH HOH A . D 4 HOH 244 2244 2244 HOH HOH A . D 4 HOH 245 2245 2245 HOH HOH A . D 4 HOH 246 2246 2246 HOH HOH A . D 4 HOH 247 2247 2247 HOH HOH A . D 4 HOH 248 2248 2248 HOH HOH A . D 4 HOH 249 2249 2249 HOH HOH A . D 4 HOH 250 2250 2250 HOH HOH A . D 4 HOH 251 2251 2251 HOH HOH A . D 4 HOH 252 2252 2252 HOH HOH A . D 4 HOH 253 2253 2253 HOH HOH A . D 4 HOH 254 2254 2254 HOH HOH A . D 4 HOH 255 2255 2255 HOH HOH A . D 4 HOH 256 2256 2256 HOH HOH A . D 4 HOH 257 2257 2257 HOH HOH A . D 4 HOH 258 2258 2258 HOH HOH A . D 4 HOH 259 2259 2259 HOH HOH A . D 4 HOH 260 2260 2260 HOH HOH A . D 4 HOH 261 2261 2261 HOH HOH A . D 4 HOH 262 2262 2262 HOH HOH A . D 4 HOH 263 2263 2263 HOH HOH A . D 4 HOH 264 2264 2264 HOH HOH A . D 4 HOH 265 2265 2265 HOH HOH A . D 4 HOH 266 2266 2266 HOH HOH A . D 4 HOH 267 2267 2267 HOH HOH A . D 4 HOH 268 2268 2268 HOH HOH A . D 4 HOH 269 2269 2269 HOH HOH A . D 4 HOH 270 2270 2270 HOH HOH A . D 4 HOH 271 2271 2271 HOH HOH A . D 4 HOH 272 2272 2272 HOH HOH A . D 4 HOH 273 2273 2273 HOH HOH A . D 4 HOH 274 2274 2274 HOH HOH A . D 4 HOH 275 2275 2275 HOH HOH A . D 4 HOH 276 2276 2276 HOH HOH A . D 4 HOH 277 2277 2277 HOH HOH A . D 4 HOH 278 2278 2278 HOH HOH A . D 4 HOH 279 2279 2279 HOH HOH A . D 4 HOH 280 2280 2280 HOH HOH A . D 4 HOH 281 2281 2281 HOH HOH A . D 4 HOH 282 2282 2282 HOH HOH A . E 4 HOH 1 2001 2001 HOH HOH U . E 4 HOH 2 2002 2002 HOH HOH U . E 4 HOH 3 2003 2003 HOH HOH U . E 4 HOH 4 2004 2004 HOH HOH U . E 4 HOH 5 2005 2005 HOH HOH U . E 4 HOH 6 2006 2006 HOH HOH U . E 4 HOH 7 2007 2007 HOH HOH U . E 4 HOH 8 2008 2008 HOH HOH U . E 4 HOH 9 2009 2009 HOH HOH U . E 4 HOH 10 2010 2010 HOH HOH U . E 4 HOH 11 2011 2011 HOH HOH U . E 4 HOH 12 2012 2012 HOH HOH U . E 4 HOH 13 2013 2013 HOH HOH U . E 4 HOH 14 2014 2014 HOH HOH U . E 4 HOH 15 2015 2015 HOH HOH U . E 4 HOH 16 2016 2016 HOH HOH U . E 4 HOH 17 2017 2017 HOH HOH U . E 4 HOH 18 2018 2018 HOH HOH U . E 4 HOH 19 2019 2019 HOH HOH U . E 4 HOH 20 2020 2020 HOH HOH U . E 4 HOH 21 2021 2021 HOH HOH U . E 4 HOH 22 2022 2022 HOH HOH U . E 4 HOH 23 2023 2023 HOH HOH U . E 4 HOH 24 2024 2024 HOH HOH U . F 4 HOH 1 2001 2001 HOH HOH V . F 4 HOH 2 2002 2002 HOH HOH V . F 4 HOH 3 2003 2003 HOH HOH V . F 4 HOH 4 2004 2004 HOH HOH V . F 4 HOH 5 2005 2005 HOH HOH V . F 4 HOH 6 2006 2006 HOH HOH V . F 4 HOH 7 2007 2007 HOH HOH V . F 4 HOH 8 2008 2008 HOH HOH V . F 4 HOH 9 2009 2009 HOH HOH V . F 4 HOH 10 2010 2010 HOH HOH V . F 4 HOH 11 2011 2011 HOH HOH V . F 4 HOH 12 2012 2012 HOH HOH V . F 4 HOH 13 2013 2013 HOH HOH V . F 4 HOH 14 2014 2014 HOH HOH V . F 4 HOH 15 2015 2015 HOH HOH V . F 4 HOH 16 2016 2016 HOH HOH V . F 4 HOH 17 2017 2017 HOH HOH V . F 4 HOH 18 2018 2018 HOH HOH V . F 4 HOH 19 2019 2019 HOH HOH V . F 4 HOH 20 2020 2020 HOH HOH V . # _software.name PHENIX _software.classification refinement _software.version '(PHENIX.REFINE)' _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 4B5F _cell.length_a 67.789 _cell.length_b 67.789 _cell.length_c 125.165 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B5F _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 4B5F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_percent_sol 37.71 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX10.1' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX10.1 _diffrn_source.pdbx_wavelength 0.98 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4B5F _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 33.80 _reflns.d_resolution_high 2.00 _reflns.number_obs 20280 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4B5F _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20280 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.895 _refine.ls_d_res_high 2.005 _refine.ls_percent_reflns_obs 99.96 _refine.ls_R_factor_obs 0.1825 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1776 _refine.ls_R_factor_R_free 0.2268 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.28 _refine.ls_number_reflns_R_free 2065 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -1.6062 _refine.aniso_B[2][2] -1.6062 _refine.aniso_B[3][3] 3.2124 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.24 _refine.pdbx_overall_phase_error 19.01 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2072 _refine_hist.pdbx_number_atoms_nucleic_acid 437 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 326 _refine_hist.number_atoms_total 2835 _refine_hist.d_res_high 2.005 _refine_hist.d_res_low 33.895 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 ? ? 2763 'X-RAY DIFFRACTION' ? f_angle_d 0.600 ? ? 3755 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.095 ? ? 1030 'X-RAY DIFFRACTION' ? f_chiral_restr 0.038 ? ? 384 'X-RAY DIFFRACTION' ? f_plane_restr 0.001 ? ? 398 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.0047 2.0763 1768 0.2122 100.00 0.2736 . . 201 . . 'X-RAY DIFFRACTION' . 2.0763 2.1594 1782 0.1974 100.00 0.2731 . . 198 . . 'X-RAY DIFFRACTION' . 2.1594 2.2577 1779 0.1830 100.00 0.2489 . . 219 . . 'X-RAY DIFFRACTION' . 2.2577 2.3767 1768 0.1753 100.00 0.2301 . . 204 . . 'X-RAY DIFFRACTION' . 2.3767 2.5256 1823 0.1831 100.00 0.2374 . . 190 . . 'X-RAY DIFFRACTION' . 2.5256 2.7205 1799 0.1896 100.00 0.2438 . . 211 . . 'X-RAY DIFFRACTION' . 2.7205 2.9941 1777 0.1915 100.00 0.2605 . . 232 . . 'X-RAY DIFFRACTION' . 2.9941 3.4270 1875 0.1724 100.00 0.2386 . . 179 . . 'X-RAY DIFFRACTION' . 3.4270 4.3163 1862 0.1583 100.00 0.1816 . . 210 . . 'X-RAY DIFFRACTION' . 4.3163 33.8993 1982 0.1603 100.00 0.1914 . . 221 . . # _database_PDB_matrix.entry_id 4B5F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4B5F _struct.title 'Substrate bound Neisseria AP endonuclease in absence of metal ions (crystal form 1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4B5F _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP C9X331_NEIM8 1 ? ? C9X331 ? 2 PDB 4B5F 2 ? ? 4B5F ? 3 PDB 4B5F 3 ? ? 4B5F ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4B5F A 1 ? 259 ? C9X331 1 ? 259 ? 1 259 2 2 4B5F U 1 ? 11 ? 4B5F 31 ? 41 ? 31 41 3 3 4B5F V 1 ? 11 ? 4B5F 42 ? 52 ? 42 52 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4B5F _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 101 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code C9X331 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 101 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 101 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3570 ? 1 MORE -11.0 ? 1 'SSA (A^2)' 12840 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 11 ? TYR A 16 ? GLY A 11 TYR A 16 1 ? 6 HELX_P HELX_P2 2 GLY A 19 ? SER A 27 ? GLY A 19 SER A 27 1 ? 9 HELX_P HELX_P3 3 GLN A 40 ? LEU A 44 ? GLN A 40 LEU A 44 5 ? 5 HELX_P HELX_P4 4 SER A 45 ? ASN A 50 ? SER A 45 ASN A 50 1 ? 6 HELX_P HELX_P5 5 PRO A 51 ? MET A 54 ? PRO A 51 MET A 54 5 ? 4 HELX_P HELX_P6 6 ILE A 86 ? ARG A 91 ? ILE A 86 ARG A 91 1 ? 6 HELX_P HELX_P7 7 ALA A 116 ? GLU A 140 ? ALA A 116 GLU A 140 1 ? 25 HELX_P HELX_P8 8 GLN A 155 ? ASP A 158 ? GLN A 155 ASP A 158 5 ? 4 HELX_P HELX_P9 9 LEU A 172 ? LYS A 185 ? LEU A 172 LYS A 185 1 ? 14 HELX_P HELX_P10 10 MET A 191 ? TYR A 196 ? MET A 191 TYR A 196 1 ? 6 HELX_P HELX_P11 11 GLN A 210 ? ASP A 215 ? GLN A 210 ASP A 215 1 ? 6 HELX_P HELX_P12 12 THR A 226 ? ALA A 231 ? THR A 226 ALA A 231 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 5 "O3'" ? ? ? 1_555 B 3DR 6 P ? ? U DC 35 U 3DR 36 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale both ? B 3DR 6 "O3'" ? ? ? 1_555 B DG 7 P ? ? U 3DR 36 U DG 37 1_555 ? ? ? ? ? ? ? 1.608 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 11 N3 ? ? U DG 31 V DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 11 O2 ? ? U DG 31 V DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 11 N4 ? ? U DG 31 V DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 10 N1 ? ? U DC 32 V DG 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 10 O6 ? ? U DC 32 V DG 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 10 N2 ? ? U DC 32 V DG 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 9 N1 ? ? U DT 33 V DA 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 9 N6 ? ? U DT 33 V DA 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 8 N3 ? ? U DA 34 V DT 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 8 O4 ? ? U DA 34 V DT 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 7 N1 A ? U DC 35 V DG 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 7 N1 C ? U DC 35 V DG 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 7 O6 A ? U DC 35 V DG 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 7 O6 C ? U DC 35 V DG 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 7 N2 A ? U DC 35 V DG 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 7 N2 C ? U DC 35 V DG 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 5 O2 A ? U DG 37 V DC 46 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog18 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 4 N3 ? ? U DA 38 V DT 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 8 N6 ? ? ? 1_555 C DT 4 O4 ? ? U DA 38 V DT 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 3 N1 ? ? U DT 39 V DA 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 3 N6 ? ? U DT 39 V DA 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 2 N1 ? ? U DC 40 V DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 2 O6 ? ? U DC 40 V DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 2 N2 ? ? U DC 40 V DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 1 N3 ? ? U DG 41 V DC 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 1 O2 ? ? U DG 41 V DC 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 1 N4 ? ? U DG 41 V DC 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 6 ? AC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 HIS A 55 ? HIS A 59 ? HIS A 55 HIS A 59 AA 2 VAL A 69 ? SER A 73 ? VAL A 69 SER A 73 AA 3 ILE A 31 ? GLN A 35 ? ILE A 31 GLN A 35 AA 4 LEU A 2 ? ASN A 8 ? LEU A 2 ASN A 8 AA 5 LEU A 250 ? TYR A 254 ? LEU A 250 TYR A 254 AA 6 ALA A 233 ? VAL A 238 ? ALA A 233 VAL A 238 AB 1 ASN A 79 ? ILE A 82 ? ASN A 79 ILE A 82 AB 2 PHE A 95 ? PHE A 100 ? PHE A 95 PHE A 100 AB 3 LEU A 103 ? TYR A 109 ? LEU A 103 TYR A 109 AB 4 ASP A 143 ? ASP A 149 ? ASP A 143 ASP A 149 AB 5 ASP A 221 ? VAL A 225 ? ASP A 221 VAL A 225 AB 6 THR A 189 ? ASP A 190 ? THR A 189 ASP A 190 AC 1 TRP A 204 ? TRP A 205 ? TRP A 204 TRP A 205 AC 2 GLY A 217 ? TRP A 218 ? GLY A 217 TRP A 218 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N HIS A 59 ? N HIS A 59 O VAL A 69 ? O VAL A 69 AA 2 3 N TYR A 72 ? N TYR A 72 O VAL A 32 ? O VAL A 32 AA 3 4 N CYS A 33 ? N CYS A 33 O ILE A 5 ? O ILE A 5 AA 4 5 N SER A 6 ? N SER A 6 O LEU A 250 ? O LEU A 250 AA 5 6 O GLU A 253 ? O GLU A 253 N VAL A 234 ? N VAL A 234 AB 1 2 N GLN A 81 ? N GLN A 81 O ARG A 97 ? O ARG A 97 AB 2 3 N PHE A 100 ? N PHE A 100 O LEU A 103 ? O LEU A 103 AB 3 4 N SER A 104 ? N SER A 104 O ASP A 143 ? O ASP A 143 AB 4 5 N GLY A 148 ? N GLY A 148 O TYR A 222 ? O TYR A 222 AB 5 6 N VAL A 225 ? N VAL A 225 O THR A 189 ? O THR A 189 AC 1 2 O TRP A 204 ? O TRP A 204 N TRP A 218 ? N TRP A 218 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2209 ? ? O A HOH 2210 ? ? 2.10 2 1 O A HOH 2214 ? ? O A HOH 2215 ? ? 2.17 3 1 O A HOH 2068 ? ? O A HOH 2152 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" U DC 40 ? ? "C1'" U DC 40 ? ? N1 U DC 40 ? ? 110.40 108.30 2.10 0.30 N 2 1 "O4'" V DG 51 ? ? "C1'" V DG 51 ? ? N9 V DG 51 ? ? 110.12 108.30 1.82 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 67 ? ? 51.12 -143.46 2 1 ASN A 161 ? ? -105.08 75.37 3 1 PHE A 171 ? ? -141.44 31.47 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2257 ? D HOH . 2 1 U HOH 2023 ? E HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 257 ? A ALA 257 2 1 Y 1 A ALA 258 ? A ALA 258 3 1 Y 1 A GLU 259 ? A GLU 259 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3DR "O5'" O N N 1 3DR P P N N 2 3DR OP1 O N N 3 3DR OP2 O N N 4 3DR OP3 O N N 5 3DR "C2'" C N N 6 3DR "C5'" C N N 7 3DR "C4'" C N R 8 3DR "O4'" O N N 9 3DR "C1'" C N N 10 3DR "C3'" C N S 11 3DR "O3'" O N N 12 3DR HOP2 H N N 13 3DR HOP3 H N N 14 3DR "H2'" H N N 15 3DR "H2''" H N N 16 3DR "H5'" H N N 17 3DR "H5''" H N N 18 3DR "H4'1" H N N 19 3DR "H1'1" H N N 20 3DR "H1'2" H N N 21 3DR "H3'" H N N 22 3DR "HO3'" H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 ASN N N N N 64 ASN CA C N S 65 ASN C C N N 66 ASN O O N N 67 ASN CB C N N 68 ASN CG C N N 69 ASN OD1 O N N 70 ASN ND2 N N N 71 ASN OXT O N N 72 ASN H H N N 73 ASN H2 H N N 74 ASN HA H N N 75 ASN HB2 H N N 76 ASN HB3 H N N 77 ASN HD21 H N N 78 ASN HD22 H N N 79 ASN HXT H N N 80 ASP N N N N 81 ASP CA C N S 82 ASP C C N N 83 ASP O O N N 84 ASP CB C N N 85 ASP CG C N N 86 ASP OD1 O N N 87 ASP OD2 O N N 88 ASP OXT O N N 89 ASP H H N N 90 ASP H2 H N N 91 ASP HA H N N 92 ASP HB2 H N N 93 ASP HB3 H N N 94 ASP HD2 H N N 95 ASP HXT H N N 96 CYS N N N N 97 CYS CA C N R 98 CYS C C N N 99 CYS O O N N 100 CYS CB C N N 101 CYS SG S N N 102 CYS OXT O N N 103 CYS H H N N 104 CYS H2 H N N 105 CYS HA H N N 106 CYS HB2 H N N 107 CYS HB3 H N N 108 CYS HG H N N 109 CYS HXT H N N 110 DA OP3 O N N 111 DA P P N N 112 DA OP1 O N N 113 DA OP2 O N N 114 DA "O5'" O N N 115 DA "C5'" C N N 116 DA "C4'" C N R 117 DA "O4'" O N N 118 DA "C3'" C N S 119 DA "O3'" O N N 120 DA "C2'" C N N 121 DA "C1'" C N R 122 DA N9 N Y N 123 DA C8 C Y N 124 DA N7 N Y N 125 DA C5 C Y N 126 DA C6 C Y N 127 DA N6 N N N 128 DA N1 N Y N 129 DA C2 C Y N 130 DA N3 N Y N 131 DA C4 C Y N 132 DA HOP3 H N N 133 DA HOP2 H N N 134 DA "H5'" H N N 135 DA "H5''" H N N 136 DA "H4'" H N N 137 DA "H3'" H N N 138 DA "HO3'" H N N 139 DA "H2'" H N N 140 DA "H2''" H N N 141 DA "H1'" H N N 142 DA H8 H N N 143 DA H61 H N N 144 DA H62 H N N 145 DA H2 H N N 146 DC OP3 O N N 147 DC P P N N 148 DC OP1 O N N 149 DC OP2 O N N 150 DC "O5'" O N N 151 DC "C5'" C N N 152 DC "C4'" C N R 153 DC "O4'" O N N 154 DC "C3'" C N S 155 DC "O3'" O N N 156 DC "C2'" C N N 157 DC "C1'" C N R 158 DC N1 N N N 159 DC C2 C N N 160 DC O2 O N N 161 DC N3 N N N 162 DC C4 C N N 163 DC N4 N N N 164 DC C5 C N N 165 DC C6 C N N 166 DC HOP3 H N N 167 DC HOP2 H N N 168 DC "H5'" H N N 169 DC "H5''" H N N 170 DC "H4'" H N N 171 DC "H3'" H N N 172 DC "HO3'" H N N 173 DC "H2'" H N N 174 DC "H2''" H N N 175 DC "H1'" H N N 176 DC H41 H N N 177 DC H42 H N N 178 DC H5 H N N 179 DC H6 H N N 180 DG OP3 O N N 181 DG P P N N 182 DG OP1 O N N 183 DG OP2 O N N 184 DG "O5'" O N N 185 DG "C5'" C N N 186 DG "C4'" C N R 187 DG "O4'" O N N 188 DG "C3'" C N S 189 DG "O3'" O N N 190 DG "C2'" C N N 191 DG "C1'" C N R 192 DG N9 N Y N 193 DG C8 C Y N 194 DG N7 N Y N 195 DG C5 C Y N 196 DG C6 C N N 197 DG O6 O N N 198 DG N1 N N N 199 DG C2 C N N 200 DG N2 N N N 201 DG N3 N N N 202 DG C4 C Y N 203 DG HOP3 H N N 204 DG HOP2 H N N 205 DG "H5'" H N N 206 DG "H5''" H N N 207 DG "H4'" H N N 208 DG "H3'" H N N 209 DG "HO3'" H N N 210 DG "H2'" H N N 211 DG "H2''" H N N 212 DG "H1'" H N N 213 DG H8 H N N 214 DG H1 H N N 215 DG H21 H N N 216 DG H22 H N N 217 DT OP3 O N N 218 DT P P N N 219 DT OP1 O N N 220 DT OP2 O N N 221 DT "O5'" O N N 222 DT "C5'" C N N 223 DT "C4'" C N R 224 DT "O4'" O N N 225 DT "C3'" C N S 226 DT "O3'" O N N 227 DT "C2'" C N N 228 DT "C1'" C N R 229 DT N1 N N N 230 DT C2 C N N 231 DT O2 O N N 232 DT N3 N N N 233 DT C4 C N N 234 DT O4 O N N 235 DT C5 C N N 236 DT C7 C N N 237 DT C6 C N N 238 DT HOP3 H N N 239 DT HOP2 H N N 240 DT "H5'" H N N 241 DT "H5''" H N N 242 DT "H4'" H N N 243 DT "H3'" H N N 244 DT "HO3'" H N N 245 DT "H2'" H N N 246 DT "H2''" H N N 247 DT "H1'" H N N 248 DT H3 H N N 249 DT H71 H N N 250 DT H72 H N N 251 DT H73 H N N 252 DT H6 H N N 253 GLN N N N N 254 GLN CA C N S 255 GLN C C N N 256 GLN O O N N 257 GLN CB C N N 258 GLN CG C N N 259 GLN CD C N N 260 GLN OE1 O N N 261 GLN NE2 N N N 262 GLN OXT O N N 263 GLN H H N N 264 GLN H2 H N N 265 GLN HA H N N 266 GLN HB2 H N N 267 GLN HB3 H N N 268 GLN HG2 H N N 269 GLN HG3 H N N 270 GLN HE21 H N N 271 GLN HE22 H N N 272 GLN HXT H N N 273 GLU N N N N 274 GLU CA C N S 275 GLU C C N N 276 GLU O O N N 277 GLU CB C N N 278 GLU CG C N N 279 GLU CD C N N 280 GLU OE1 O N N 281 GLU OE2 O N N 282 GLU OXT O N N 283 GLU H H N N 284 GLU H2 H N N 285 GLU HA H N N 286 GLU HB2 H N N 287 GLU HB3 H N N 288 GLU HG2 H N N 289 GLU HG3 H N N 290 GLU HE2 H N N 291 GLU HXT H N N 292 GLY N N N N 293 GLY CA C N N 294 GLY C C N N 295 GLY O O N N 296 GLY OXT O N N 297 GLY H H N N 298 GLY H2 H N N 299 GLY HA2 H N N 300 GLY HA3 H N N 301 GLY HXT H N N 302 HIS N N N N 303 HIS CA C N S 304 HIS C C N N 305 HIS O O N N 306 HIS CB C N N 307 HIS CG C Y N 308 HIS ND1 N Y N 309 HIS CD2 C Y N 310 HIS CE1 C Y N 311 HIS NE2 N Y N 312 HIS OXT O N N 313 HIS H H N N 314 HIS H2 H N N 315 HIS HA H N N 316 HIS HB2 H N N 317 HIS HB3 H N N 318 HIS HD1 H N N 319 HIS HD2 H N N 320 HIS HE1 H N N 321 HIS HE2 H N N 322 HIS HXT H N N 323 HOH O O N N 324 HOH H1 H N N 325 HOH H2 H N N 326 ILE N N N N 327 ILE CA C N S 328 ILE C C N N 329 ILE O O N N 330 ILE CB C N S 331 ILE CG1 C N N 332 ILE CG2 C N N 333 ILE CD1 C N N 334 ILE OXT O N N 335 ILE H H N N 336 ILE H2 H N N 337 ILE HA H N N 338 ILE HB H N N 339 ILE HG12 H N N 340 ILE HG13 H N N 341 ILE HG21 H N N 342 ILE HG22 H N N 343 ILE HG23 H N N 344 ILE HD11 H N N 345 ILE HD12 H N N 346 ILE HD13 H N N 347 ILE HXT H N N 348 LEU N N N N 349 LEU CA C N S 350 LEU C C N N 351 LEU O O N N 352 LEU CB C N N 353 LEU CG C N N 354 LEU CD1 C N N 355 LEU CD2 C N N 356 LEU OXT O N N 357 LEU H H N N 358 LEU H2 H N N 359 LEU HA H N N 360 LEU HB2 H N N 361 LEU HB3 H N N 362 LEU HG H N N 363 LEU HD11 H N N 364 LEU HD12 H N N 365 LEU HD13 H N N 366 LEU HD21 H N N 367 LEU HD22 H N N 368 LEU HD23 H N N 369 LEU HXT H N N 370 LYS N N N N 371 LYS CA C N S 372 LYS C C N N 373 LYS O O N N 374 LYS CB C N N 375 LYS CG C N N 376 LYS CD C N N 377 LYS CE C N N 378 LYS NZ N N N 379 LYS OXT O N N 380 LYS H H N N 381 LYS H2 H N N 382 LYS HA H N N 383 LYS HB2 H N N 384 LYS HB3 H N N 385 LYS HG2 H N N 386 LYS HG3 H N N 387 LYS HD2 H N N 388 LYS HD3 H N N 389 LYS HE2 H N N 390 LYS HE3 H N N 391 LYS HZ1 H N N 392 LYS HZ2 H N N 393 LYS HZ3 H N N 394 LYS HXT H N N 395 MET N N N N 396 MET CA C N S 397 MET C C N N 398 MET O O N N 399 MET CB C N N 400 MET CG C N N 401 MET SD S N N 402 MET CE C N N 403 MET OXT O N N 404 MET H H N N 405 MET H2 H N N 406 MET HA H N N 407 MET HB2 H N N 408 MET HB3 H N N 409 MET HG2 H N N 410 MET HG3 H N N 411 MET HE1 H N N 412 MET HE2 H N N 413 MET HE3 H N N 414 MET HXT H N N 415 PHE N N N N 416 PHE CA C N S 417 PHE C C N N 418 PHE O O N N 419 PHE CB C N N 420 PHE CG C Y N 421 PHE CD1 C Y N 422 PHE CD2 C Y N 423 PHE CE1 C Y N 424 PHE CE2 C Y N 425 PHE CZ C Y N 426 PHE OXT O N N 427 PHE H H N N 428 PHE H2 H N N 429 PHE HA H N N 430 PHE HB2 H N N 431 PHE HB3 H N N 432 PHE HD1 H N N 433 PHE HD2 H N N 434 PHE HE1 H N N 435 PHE HE2 H N N 436 PHE HZ H N N 437 PHE HXT H N N 438 PRO N N N N 439 PRO CA C N S 440 PRO C C N N 441 PRO O O N N 442 PRO CB C N N 443 PRO CG C N N 444 PRO CD C N N 445 PRO OXT O N N 446 PRO H H N N 447 PRO HA H N N 448 PRO HB2 H N N 449 PRO HB3 H N N 450 PRO HG2 H N N 451 PRO HG3 H N N 452 PRO HD2 H N N 453 PRO HD3 H N N 454 PRO HXT H N N 455 SER N N N N 456 SER CA C N S 457 SER C C N N 458 SER O O N N 459 SER CB C N N 460 SER OG O N N 461 SER OXT O N N 462 SER H H N N 463 SER H2 H N N 464 SER HA H N N 465 SER HB2 H N N 466 SER HB3 H N N 467 SER HG H N N 468 SER HXT H N N 469 THR N N N N 470 THR CA C N S 471 THR C C N N 472 THR O O N N 473 THR CB C N R 474 THR OG1 O N N 475 THR CG2 C N N 476 THR OXT O N N 477 THR H H N N 478 THR H2 H N N 479 THR HA H N N 480 THR HB H N N 481 THR HG1 H N N 482 THR HG21 H N N 483 THR HG22 H N N 484 THR HG23 H N N 485 THR HXT H N N 486 TRP N N N N 487 TRP CA C N S 488 TRP C C N N 489 TRP O O N N 490 TRP CB C N N 491 TRP CG C Y N 492 TRP CD1 C Y N 493 TRP CD2 C Y N 494 TRP NE1 N Y N 495 TRP CE2 C Y N 496 TRP CE3 C Y N 497 TRP CZ2 C Y N 498 TRP CZ3 C Y N 499 TRP CH2 C Y N 500 TRP OXT O N N 501 TRP H H N N 502 TRP H2 H N N 503 TRP HA H N N 504 TRP HB2 H N N 505 TRP HB3 H N N 506 TRP HD1 H N N 507 TRP HE1 H N N 508 TRP HE3 H N N 509 TRP HZ2 H N N 510 TRP HZ3 H N N 511 TRP HH2 H N N 512 TRP HXT H N N 513 TYR N N N N 514 TYR CA C N S 515 TYR C C N N 516 TYR O O N N 517 TYR CB C N N 518 TYR CG C Y N 519 TYR CD1 C Y N 520 TYR CD2 C Y N 521 TYR CE1 C Y N 522 TYR CE2 C Y N 523 TYR CZ C Y N 524 TYR OH O N N 525 TYR OXT O N N 526 TYR H H N N 527 TYR H2 H N N 528 TYR HA H N N 529 TYR HB2 H N N 530 TYR HB3 H N N 531 TYR HD1 H N N 532 TYR HD2 H N N 533 TYR HE1 H N N 534 TYR HE2 H N N 535 TYR HH H N N 536 TYR HXT H N N 537 VAL N N N N 538 VAL CA C N S 539 VAL C C N N 540 VAL O O N N 541 VAL CB C N N 542 VAL CG1 C N N 543 VAL CG2 C N N 544 VAL OXT O N N 545 VAL H H N N 546 VAL H2 H N N 547 VAL HA H N N 548 VAL HB H N N 549 VAL HG11 H N N 550 VAL HG12 H N N 551 VAL HG13 H N N 552 VAL HG21 H N N 553 VAL HG22 H N N 554 VAL HG23 H N N 555 VAL HXT H N N 556 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3DR "O5'" P sing N N 1 3DR "O5'" "C5'" sing N N 2 3DR P OP1 doub N N 3 3DR P OP2 sing N N 4 3DR P OP3 sing N N 5 3DR OP2 HOP2 sing N N 6 3DR OP3 HOP3 sing N N 7 3DR "C2'" "C1'" sing N N 8 3DR "C2'" "C3'" sing N N 9 3DR "C2'" "H2'" sing N N 10 3DR "C2'" "H2''" sing N N 11 3DR "C5'" "C4'" sing N N 12 3DR "C5'" "H5'" sing N N 13 3DR "C5'" "H5''" sing N N 14 3DR "C4'" "O4'" sing N N 15 3DR "C4'" "C3'" sing N N 16 3DR "C4'" "H4'1" sing N N 17 3DR "O4'" "C1'" sing N N 18 3DR "C1'" "H1'1" sing N N 19 3DR "C1'" "H1'2" sing N N 20 3DR "C3'" "O3'" sing N N 21 3DR "C3'" "H3'" sing N N 22 3DR "O3'" "HO3'" sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ARG N CA sing N N 36 ARG N H sing N N 37 ARG N H2 sing N N 38 ARG CA C sing N N 39 ARG CA CB sing N N 40 ARG CA HA sing N N 41 ARG C O doub N N 42 ARG C OXT sing N N 43 ARG CB CG sing N N 44 ARG CB HB2 sing N N 45 ARG CB HB3 sing N N 46 ARG CG CD sing N N 47 ARG CG HG2 sing N N 48 ARG CG HG3 sing N N 49 ARG CD NE sing N N 50 ARG CD HD2 sing N N 51 ARG CD HD3 sing N N 52 ARG NE CZ sing N N 53 ARG NE HE sing N N 54 ARG CZ NH1 sing N N 55 ARG CZ NH2 doub N N 56 ARG NH1 HH11 sing N N 57 ARG NH1 HH12 sing N N 58 ARG NH2 HH21 sing N N 59 ARG NH2 HH22 sing N N 60 ARG OXT HXT sing N N 61 ASN N CA sing N N 62 ASN N H sing N N 63 ASN N H2 sing N N 64 ASN CA C sing N N 65 ASN CA CB sing N N 66 ASN CA HA sing N N 67 ASN C O doub N N 68 ASN C OXT sing N N 69 ASN CB CG sing N N 70 ASN CB HB2 sing N N 71 ASN CB HB3 sing N N 72 ASN CG OD1 doub N N 73 ASN CG ND2 sing N N 74 ASN ND2 HD21 sing N N 75 ASN ND2 HD22 sing N N 76 ASN OXT HXT sing N N 77 ASP N CA sing N N 78 ASP N H sing N N 79 ASP N H2 sing N N 80 ASP CA C sing N N 81 ASP CA CB sing N N 82 ASP CA HA sing N N 83 ASP C O doub N N 84 ASP C OXT sing N N 85 ASP CB CG sing N N 86 ASP CB HB2 sing N N 87 ASP CB HB3 sing N N 88 ASP CG OD1 doub N N 89 ASP CG OD2 sing N N 90 ASP OD2 HD2 sing N N 91 ASP OXT HXT sing N N 92 CYS N CA sing N N 93 CYS N H sing N N 94 CYS N H2 sing N N 95 CYS CA C sing N N 96 CYS CA CB sing N N 97 CYS CA HA sing N N 98 CYS C O doub N N 99 CYS C OXT sing N N 100 CYS CB SG sing N N 101 CYS CB HB2 sing N N 102 CYS CB HB3 sing N N 103 CYS SG HG sing N N 104 CYS OXT HXT sing N N 105 DA OP3 P sing N N 106 DA OP3 HOP3 sing N N 107 DA P OP1 doub N N 108 DA P OP2 sing N N 109 DA P "O5'" sing N N 110 DA OP2 HOP2 sing N N 111 DA "O5'" "C5'" sing N N 112 DA "C5'" "C4'" sing N N 113 DA "C5'" "H5'" sing N N 114 DA "C5'" "H5''" sing N N 115 DA "C4'" "O4'" sing N N 116 DA "C4'" "C3'" sing N N 117 DA "C4'" "H4'" sing N N 118 DA "O4'" "C1'" sing N N 119 DA "C3'" "O3'" sing N N 120 DA "C3'" "C2'" sing N N 121 DA "C3'" "H3'" sing N N 122 DA "O3'" "HO3'" sing N N 123 DA "C2'" "C1'" sing N N 124 DA "C2'" "H2'" sing N N 125 DA "C2'" "H2''" sing N N 126 DA "C1'" N9 sing N N 127 DA "C1'" "H1'" sing N N 128 DA N9 C8 sing Y N 129 DA N9 C4 sing Y N 130 DA C8 N7 doub Y N 131 DA C8 H8 sing N N 132 DA N7 C5 sing Y N 133 DA C5 C6 sing Y N 134 DA C5 C4 doub Y N 135 DA C6 N6 sing N N 136 DA C6 N1 doub Y N 137 DA N6 H61 sing N N 138 DA N6 H62 sing N N 139 DA N1 C2 sing Y N 140 DA C2 N3 doub Y N 141 DA C2 H2 sing N N 142 DA N3 C4 sing Y N 143 DC OP3 P sing N N 144 DC OP3 HOP3 sing N N 145 DC P OP1 doub N N 146 DC P OP2 sing N N 147 DC P "O5'" sing N N 148 DC OP2 HOP2 sing N N 149 DC "O5'" "C5'" sing N N 150 DC "C5'" "C4'" sing N N 151 DC "C5'" "H5'" sing N N 152 DC "C5'" "H5''" sing N N 153 DC "C4'" "O4'" sing N N 154 DC "C4'" "C3'" sing N N 155 DC "C4'" "H4'" sing N N 156 DC "O4'" "C1'" sing N N 157 DC "C3'" "O3'" sing N N 158 DC "C3'" "C2'" sing N N 159 DC "C3'" "H3'" sing N N 160 DC "O3'" "HO3'" sing N N 161 DC "C2'" "C1'" sing N N 162 DC "C2'" "H2'" sing N N 163 DC "C2'" "H2''" sing N N 164 DC "C1'" N1 sing N N 165 DC "C1'" "H1'" sing N N 166 DC N1 C2 sing N N 167 DC N1 C6 sing N N 168 DC C2 O2 doub N N 169 DC C2 N3 sing N N 170 DC N3 C4 doub N N 171 DC C4 N4 sing N N 172 DC C4 C5 sing N N 173 DC N4 H41 sing N N 174 DC N4 H42 sing N N 175 DC C5 C6 doub N N 176 DC C5 H5 sing N N 177 DC C6 H6 sing N N 178 DG OP3 P sing N N 179 DG OP3 HOP3 sing N N 180 DG P OP1 doub N N 181 DG P OP2 sing N N 182 DG P "O5'" sing N N 183 DG OP2 HOP2 sing N N 184 DG "O5'" "C5'" sing N N 185 DG "C5'" "C4'" sing N N 186 DG "C5'" "H5'" sing N N 187 DG "C5'" "H5''" sing N N 188 DG "C4'" "O4'" sing N N 189 DG "C4'" "C3'" sing N N 190 DG "C4'" "H4'" sing N N 191 DG "O4'" "C1'" sing N N 192 DG "C3'" "O3'" sing N N 193 DG "C3'" "C2'" sing N N 194 DG "C3'" "H3'" sing N N 195 DG "O3'" "HO3'" sing N N 196 DG "C2'" "C1'" sing N N 197 DG "C2'" "H2'" sing N N 198 DG "C2'" "H2''" sing N N 199 DG "C1'" N9 sing N N 200 DG "C1'" "H1'" sing N N 201 DG N9 C8 sing Y N 202 DG N9 C4 sing Y N 203 DG C8 N7 doub Y N 204 DG C8 H8 sing N N 205 DG N7 C5 sing Y N 206 DG C5 C6 sing N N 207 DG C5 C4 doub Y N 208 DG C6 O6 doub N N 209 DG C6 N1 sing N N 210 DG N1 C2 sing N N 211 DG N1 H1 sing N N 212 DG C2 N2 sing N N 213 DG C2 N3 doub N N 214 DG N2 H21 sing N N 215 DG N2 H22 sing N N 216 DG N3 C4 sing N N 217 DT OP3 P sing N N 218 DT OP3 HOP3 sing N N 219 DT P OP1 doub N N 220 DT P OP2 sing N N 221 DT P "O5'" sing N N 222 DT OP2 HOP2 sing N N 223 DT "O5'" "C5'" sing N N 224 DT "C5'" "C4'" sing N N 225 DT "C5'" "H5'" sing N N 226 DT "C5'" "H5''" sing N N 227 DT "C4'" "O4'" sing N N 228 DT "C4'" "C3'" sing N N 229 DT "C4'" "H4'" sing N N 230 DT "O4'" "C1'" sing N N 231 DT "C3'" "O3'" sing N N 232 DT "C3'" "C2'" sing N N 233 DT "C3'" "H3'" sing N N 234 DT "O3'" "HO3'" sing N N 235 DT "C2'" "C1'" sing N N 236 DT "C2'" "H2'" sing N N 237 DT "C2'" "H2''" sing N N 238 DT "C1'" N1 sing N N 239 DT "C1'" "H1'" sing N N 240 DT N1 C2 sing N N 241 DT N1 C6 sing N N 242 DT C2 O2 doub N N 243 DT C2 N3 sing N N 244 DT N3 C4 sing N N 245 DT N3 H3 sing N N 246 DT C4 O4 doub N N 247 DT C4 C5 sing N N 248 DT C5 C7 sing N N 249 DT C5 C6 doub N N 250 DT C7 H71 sing N N 251 DT C7 H72 sing N N 252 DT C7 H73 sing N N 253 DT C6 H6 sing N N 254 GLN N CA sing N N 255 GLN N H sing N N 256 GLN N H2 sing N N 257 GLN CA C sing N N 258 GLN CA CB sing N N 259 GLN CA HA sing N N 260 GLN C O doub N N 261 GLN C OXT sing N N 262 GLN CB CG sing N N 263 GLN CB HB2 sing N N 264 GLN CB HB3 sing N N 265 GLN CG CD sing N N 266 GLN CG HG2 sing N N 267 GLN CG HG3 sing N N 268 GLN CD OE1 doub N N 269 GLN CD NE2 sing N N 270 GLN NE2 HE21 sing N N 271 GLN NE2 HE22 sing N N 272 GLN OXT HXT sing N N 273 GLU N CA sing N N 274 GLU N H sing N N 275 GLU N H2 sing N N 276 GLU CA C sing N N 277 GLU CA CB sing N N 278 GLU CA HA sing N N 279 GLU C O doub N N 280 GLU C OXT sing N N 281 GLU CB CG sing N N 282 GLU CB HB2 sing N N 283 GLU CB HB3 sing N N 284 GLU CG CD sing N N 285 GLU CG HG2 sing N N 286 GLU CG HG3 sing N N 287 GLU CD OE1 doub N N 288 GLU CD OE2 sing N N 289 GLU OE2 HE2 sing N N 290 GLU OXT HXT sing N N 291 GLY N CA sing N N 292 GLY N H sing N N 293 GLY N H2 sing N N 294 GLY CA C sing N N 295 GLY CA HA2 sing N N 296 GLY CA HA3 sing N N 297 GLY C O doub N N 298 GLY C OXT sing N N 299 GLY OXT HXT sing N N 300 HIS N CA sing N N 301 HIS N H sing N N 302 HIS N H2 sing N N 303 HIS CA C sing N N 304 HIS CA CB sing N N 305 HIS CA HA sing N N 306 HIS C O doub N N 307 HIS C OXT sing N N 308 HIS CB CG sing N N 309 HIS CB HB2 sing N N 310 HIS CB HB3 sing N N 311 HIS CG ND1 sing Y N 312 HIS CG CD2 doub Y N 313 HIS ND1 CE1 doub Y N 314 HIS ND1 HD1 sing N N 315 HIS CD2 NE2 sing Y N 316 HIS CD2 HD2 sing N N 317 HIS CE1 NE2 sing Y N 318 HIS CE1 HE1 sing N N 319 HIS NE2 HE2 sing N N 320 HIS OXT HXT sing N N 321 HOH O H1 sing N N 322 HOH O H2 sing N N 323 ILE N CA sing N N 324 ILE N H sing N N 325 ILE N H2 sing N N 326 ILE CA C sing N N 327 ILE CA CB sing N N 328 ILE CA HA sing N N 329 ILE C O doub N N 330 ILE C OXT sing N N 331 ILE CB CG1 sing N N 332 ILE CB CG2 sing N N 333 ILE CB HB sing N N 334 ILE CG1 CD1 sing N N 335 ILE CG1 HG12 sing N N 336 ILE CG1 HG13 sing N N 337 ILE CG2 HG21 sing N N 338 ILE CG2 HG22 sing N N 339 ILE CG2 HG23 sing N N 340 ILE CD1 HD11 sing N N 341 ILE CD1 HD12 sing N N 342 ILE CD1 HD13 sing N N 343 ILE OXT HXT sing N N 344 LEU N CA sing N N 345 LEU N H sing N N 346 LEU N H2 sing N N 347 LEU CA C sing N N 348 LEU CA CB sing N N 349 LEU CA HA sing N N 350 LEU C O doub N N 351 LEU C OXT sing N N 352 LEU CB CG sing N N 353 LEU CB HB2 sing N N 354 LEU CB HB3 sing N N 355 LEU CG CD1 sing N N 356 LEU CG CD2 sing N N 357 LEU CG HG sing N N 358 LEU CD1 HD11 sing N N 359 LEU CD1 HD12 sing N N 360 LEU CD1 HD13 sing N N 361 LEU CD2 HD21 sing N N 362 LEU CD2 HD22 sing N N 363 LEU CD2 HD23 sing N N 364 LEU OXT HXT sing N N 365 LYS N CA sing N N 366 LYS N H sing N N 367 LYS N H2 sing N N 368 LYS CA C sing N N 369 LYS CA CB sing N N 370 LYS CA HA sing N N 371 LYS C O doub N N 372 LYS C OXT sing N N 373 LYS CB CG sing N N 374 LYS CB HB2 sing N N 375 LYS CB HB3 sing N N 376 LYS CG CD sing N N 377 LYS CG HG2 sing N N 378 LYS CG HG3 sing N N 379 LYS CD CE sing N N 380 LYS CD HD2 sing N N 381 LYS CD HD3 sing N N 382 LYS CE NZ sing N N 383 LYS CE HE2 sing N N 384 LYS CE HE3 sing N N 385 LYS NZ HZ1 sing N N 386 LYS NZ HZ2 sing N N 387 LYS NZ HZ3 sing N N 388 LYS OXT HXT sing N N 389 MET N CA sing N N 390 MET N H sing N N 391 MET N H2 sing N N 392 MET CA C sing N N 393 MET CA CB sing N N 394 MET CA HA sing N N 395 MET C O doub N N 396 MET C OXT sing N N 397 MET CB CG sing N N 398 MET CB HB2 sing N N 399 MET CB HB3 sing N N 400 MET CG SD sing N N 401 MET CG HG2 sing N N 402 MET CG HG3 sing N N 403 MET SD CE sing N N 404 MET CE HE1 sing N N 405 MET CE HE2 sing N N 406 MET CE HE3 sing N N 407 MET OXT HXT sing N N 408 PHE N CA sing N N 409 PHE N H sing N N 410 PHE N H2 sing N N 411 PHE CA C sing N N 412 PHE CA CB sing N N 413 PHE CA HA sing N N 414 PHE C O doub N N 415 PHE C OXT sing N N 416 PHE CB CG sing N N 417 PHE CB HB2 sing N N 418 PHE CB HB3 sing N N 419 PHE CG CD1 doub Y N 420 PHE CG CD2 sing Y N 421 PHE CD1 CE1 sing Y N 422 PHE CD1 HD1 sing N N 423 PHE CD2 CE2 doub Y N 424 PHE CD2 HD2 sing N N 425 PHE CE1 CZ doub Y N 426 PHE CE1 HE1 sing N N 427 PHE CE2 CZ sing Y N 428 PHE CE2 HE2 sing N N 429 PHE CZ HZ sing N N 430 PHE OXT HXT sing N N 431 PRO N CA sing N N 432 PRO N CD sing N N 433 PRO N H sing N N 434 PRO CA C sing N N 435 PRO CA CB sing N N 436 PRO CA HA sing N N 437 PRO C O doub N N 438 PRO C OXT sing N N 439 PRO CB CG sing N N 440 PRO CB HB2 sing N N 441 PRO CB HB3 sing N N 442 PRO CG CD sing N N 443 PRO CG HG2 sing N N 444 PRO CG HG3 sing N N 445 PRO CD HD2 sing N N 446 PRO CD HD3 sing N N 447 PRO OXT HXT sing N N 448 SER N CA sing N N 449 SER N H sing N N 450 SER N H2 sing N N 451 SER CA C sing N N 452 SER CA CB sing N N 453 SER CA HA sing N N 454 SER C O doub N N 455 SER C OXT sing N N 456 SER CB OG sing N N 457 SER CB HB2 sing N N 458 SER CB HB3 sing N N 459 SER OG HG sing N N 460 SER OXT HXT sing N N 461 THR N CA sing N N 462 THR N H sing N N 463 THR N H2 sing N N 464 THR CA C sing N N 465 THR CA CB sing N N 466 THR CA HA sing N N 467 THR C O doub N N 468 THR C OXT sing N N 469 THR CB OG1 sing N N 470 THR CB CG2 sing N N 471 THR CB HB sing N N 472 THR OG1 HG1 sing N N 473 THR CG2 HG21 sing N N 474 THR CG2 HG22 sing N N 475 THR CG2 HG23 sing N N 476 THR OXT HXT sing N N 477 TRP N CA sing N N 478 TRP N H sing N N 479 TRP N H2 sing N N 480 TRP CA C sing N N 481 TRP CA CB sing N N 482 TRP CA HA sing N N 483 TRP C O doub N N 484 TRP C OXT sing N N 485 TRP CB CG sing N N 486 TRP CB HB2 sing N N 487 TRP CB HB3 sing N N 488 TRP CG CD1 doub Y N 489 TRP CG CD2 sing Y N 490 TRP CD1 NE1 sing Y N 491 TRP CD1 HD1 sing N N 492 TRP CD2 CE2 doub Y N 493 TRP CD2 CE3 sing Y N 494 TRP NE1 CE2 sing Y N 495 TRP NE1 HE1 sing N N 496 TRP CE2 CZ2 sing Y N 497 TRP CE3 CZ3 doub Y N 498 TRP CE3 HE3 sing N N 499 TRP CZ2 CH2 doub Y N 500 TRP CZ2 HZ2 sing N N 501 TRP CZ3 CH2 sing Y N 502 TRP CZ3 HZ3 sing N N 503 TRP CH2 HH2 sing N N 504 TRP OXT HXT sing N N 505 TYR N CA sing N N 506 TYR N H sing N N 507 TYR N H2 sing N N 508 TYR CA C sing N N 509 TYR CA CB sing N N 510 TYR CA HA sing N N 511 TYR C O doub N N 512 TYR C OXT sing N N 513 TYR CB CG sing N N 514 TYR CB HB2 sing N N 515 TYR CB HB3 sing N N 516 TYR CG CD1 doub Y N 517 TYR CG CD2 sing Y N 518 TYR CD1 CE1 sing Y N 519 TYR CD1 HD1 sing N N 520 TYR CD2 CE2 doub Y N 521 TYR CD2 HD2 sing N N 522 TYR CE1 CZ doub Y N 523 TYR CE1 HE1 sing N N 524 TYR CE2 CZ sing Y N 525 TYR CE2 HE2 sing N N 526 TYR CZ OH sing N N 527 TYR OH HH sing N N 528 TYR OXT HXT sing N N 529 VAL N CA sing N N 530 VAL N H sing N N 531 VAL N H2 sing N N 532 VAL CA C sing N N 533 VAL CA CB sing N N 534 VAL CA HA sing N N 535 VAL C O doub N N 536 VAL C OXT sing N N 537 VAL CB CG1 sing N N 538 VAL CB CG2 sing N N 539 VAL CB HB sing N N 540 VAL CG1 HG11 sing N N 541 VAL CG1 HG12 sing N N 542 VAL CG1 HG13 sing N N 543 VAL CG2 HG21 sing N N 544 VAL CG2 HG22 sing N N 545 VAL CG2 HG23 sing N N 546 VAL OXT HXT sing N N 547 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4B5F 'double helix' 4B5F 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 11 1_555 -0.870 -0.261 0.248 4.180 -17.772 3.376 1 U_DG31:DC52_V U 31 ? V 52 ? 19 1 1 B DC 2 1_555 C DG 10 1_555 -0.262 -0.143 0.253 -16.008 -16.339 1.023 2 U_DC32:DG51_V U 32 ? V 51 ? 19 1 1 B DT 3 1_555 C DA 9 1_555 -0.562 -0.104 0.367 -13.553 -9.228 4.965 3 U_DT33:DA50_V U 33 ? V 50 ? 20 1 1 B DA 4 1_555 C DT 8 1_555 -0.061 -0.182 0.450 -1.784 -7.363 6.548 4 U_DA34:DT49_V U 34 ? V 49 ? 20 1 1 B DC 5 1_555 C DG 7 1_555 0.659 -0.114 0.135 8.435 -1.009 3.405 5 U_DC35:DG48_V U 35 ? V 48 ? 19 1 1 B DG 7 1_555 C DC 5 1_555 -1.494 0.796 -1.555 -31.569 -7.546 31.684 6 U_DG37:DC46_V U 37 ? V 46 ? ? 1 1 B DA 8 1_555 C DT 4 1_555 -0.122 -0.006 0.212 -3.446 -21.673 2.629 7 U_DA38:DT45_V U 38 ? V 45 ? 20 1 1 B DT 9 1_555 C DA 3 1_555 0.110 0.014 0.462 -8.241 -21.089 5.004 8 U_DT39:DA44_V U 39 ? V 44 ? 20 1 1 B DC 10 1_555 C DG 2 1_555 0.569 -0.216 -0.266 5.185 -13.129 0.502 9 U_DC40:DG43_V U 40 ? V 43 ? 19 1 1 B DG 11 1_555 C DC 1 1_555 -0.213 -0.173 0.506 1.224 -11.797 -2.961 10 U_DG41:DC42_V U 41 ? V 42 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 11 1_555 B DC 2 1_555 C DG 10 1_555 0.180 -1.137 3.730 2.116 -3.756 41.955 -1.134 0.001 3.818 -5.229 -2.947 42.166 1 UU_DG31DC32:DG51DC52_VV U 31 ? V 52 ? U 32 ? V 51 ? 1 B DC 2 1_555 C DG 10 1_555 B DT 3 1_555 C DA 9 1_555 -0.232 -0.576 3.294 -0.378 12.104 29.106 -3.269 0.358 2.837 22.875 0.714 31.474 2 UU_DC32DT33:DA50DG51_VV U 32 ? V 51 ? U 33 ? V 50 ? 1 B DT 3 1_555 C DA 9 1_555 B DA 4 1_555 C DT 8 1_555 0.662 0.071 3.056 0.452 7.825 32.998 -1.059 -1.067 3.002 13.539 -0.782 33.891 3 UU_DT33DA34:DT49DA50_VV U 33 ? V 50 ? U 34 ? V 49 ? 1 B DA 4 1_555 C DT 8 1_555 B DC 5 1_555 C DG 7 1_555 0.150 -0.467 3.196 1.751 4.447 31.428 -1.641 0.036 3.106 8.150 -3.209 31.780 4 UU_DA34DC35:DG48DT49_VV U 34 ? V 49 ? U 35 ? V 48 ? 1 B DG 7 1_555 C DC 5 1_555 B DA 8 1_555 C DT 4 1_555 -2.484 2.441 2.805 -16.503 -10.092 51.500 3.203 1.801 2.928 -11.175 18.274 54.780 5 UU_DG37DA38:DT45DC46_VV U 37 ? V 46 ? U 38 ? V 45 ? 1 B DA 8 1_555 C DT 4 1_555 B DT 9 1_555 C DA 3 1_555 -0.020 -0.564 3.376 -2.248 -2.844 31.532 -0.489 -0.394 3.405 -5.212 4.119 31.734 6 UU_DA38DT39:DA44DT45_VV U 38 ? V 45 ? U 39 ? V 44 ? 1 B DT 9 1_555 C DA 3 1_555 B DC 10 1_555 C DG 2 1_555 0.232 0.038 2.899 5.002 -2.901 38.325 0.374 0.195 2.895 -4.388 -7.566 38.742 7 UU_DT39DC40:DG43DA44_VV U 39 ? V 44 ? U 40 ? V 43 ? 1 B DC 10 1_555 C DG 2 1_555 B DG 11 1_555 C DC 1 1_555 -0.761 0.337 3.336 -12.453 10.730 36.176 -0.856 -0.446 3.376 16.285 18.900 39.621 8 UU_DC40DG41:DC42DG43_VV U 40 ? V 43 ? U 41 ? V 42 ? # _atom_sites.entry_id 4B5F _atom_sites.fract_transf_matrix[1][1] 0.014752 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014752 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007989 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_