HEADER SUGAR BINDING PROTEIN 30-AUG-12 4B8V TITLE CLADOSPORIUM FULVUM LYSM EFFECTOR ECP6 IN COMPLEX WITH A BETA-1,4- TITLE 2 LINKED N-ACETYL-D-GLUCOSAMINE TETRAMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRACELLULAR PROTEIN 6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FUNGAL EFFECTOR ECP6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PASSALORA FULVA; SOURCE 3 ORGANISM_COMMON: TOMATO LEAF MOLD; SOURCE 4 ORGANISM_TAXID: 5499; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PPIC9 KEYWDS SUGAR BINDING PROTEIN, CHITIN, LYSM EXPDTA X-RAY DIFFRACTION AUTHOR R.SALEEM-BATCHA,A.SANCHEZ-VALLET,G.HANSEN,B.P.H.J.THOMMA,J.R.MESTERS REVDAT 3 29-JUL-20 4B8V 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 25-SEP-13 4B8V 1 JRNL REVDAT 1 17-JUL-13 4B8V 0 JRNL AUTH A.SANCHEZ-VALLET,R.SALEEM-BATCHA,A.KOMBRINK,G.HANSEN, JRNL AUTH 2 D.J.VALKENBURG,B.P.H.J.THOMMA,J.R.MESTERS JRNL TITL FUNGAL EFFECTOR ECP6 OUTCOMPETES HOST IMMUNE RECEPTOR FOR JRNL TITL 2 CHITIN BINDING THROUGH INTRACHAIN LYSM DIMERIZATION JRNL REF ELIFE V. 2 00790 2013 JRNL REFN ESSN 2050-084X JRNL PMID 23840930 JRNL DOI 10.7554/ELIFE.00790 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.DE JONGE,H.P.VAN ESSE,A.KOMBRINK,T.SHINYA,Y.DESAKI, REMARK 1 AUTH 2 R.BOURS,S.VAN DER KROL,N.SHIBUYA,M.H.A.J.JOOSTEN, REMARK 1 AUTH 3 B.P.H.J.THOMMA REMARK 1 TITL CONSERVED FUNGAL LYSM EFFECTOR ECP6 PREVENTS REMARK 1 TITL 2 CHITIN-TRIGGERED IMMUNITY IN PLANTS. REMARK 1 REF SCIENCE V. 329 953 2010 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 20724636 REMARK 1 DOI 10.1126/SCIENCE.1190859 REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 30624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1546 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1850 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1387 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 99 REMARK 3 SOLVENT ATOMS : 119 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.21000 REMARK 3 B22 (A**2) : -0.21000 REMARK 3 B33 (A**2) : 0.32000 REMARK 3 B12 (A**2) : -0.11000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.088 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.086 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.523 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1521 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 947 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2094 ; 1.805 ; 2.049 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2352 ; 1.448 ; 3.007 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 190 ; 6.295 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;43.006 ;28.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 234 ;12.797 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 280 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1614 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 218 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1199 A 1202 REMARK 3 ORIGIN FOR THE GROUP (A): 12.4781 21.6547 22.9121 REMARK 3 T TENSOR REMARK 3 T11: 0.0834 T22: 0.0434 REMARK 3 T33: 0.0668 T12: 0.0237 REMARK 3 T13: -0.0316 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 5.1041 L22: 10.2068 REMARK 3 L33: 2.1724 L12: -1.3216 REMARK 3 L13: 1.1822 L23: -4.6337 REMARK 3 S TENSOR REMARK 3 S11: -0.0794 S12: -0.2093 S13: 0.1190 REMARK 3 S21: 0.4097 S22: 0.0658 S23: 0.0021 REMARK 3 S31: -0.1899 S32: -0.0540 S33: 0.0136 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 1198 REMARK 3 ORIGIN FOR THE GROUP (A): 13.6107 16.9239 15.1726 REMARK 3 T TENSOR REMARK 3 T11: 0.0789 T22: 0.0985 REMARK 3 T33: 0.1916 T12: 0.0398 REMARK 3 T13: 0.0124 T23: 0.0697 REMARK 3 L TENSOR REMARK 3 L11: 0.5917 L22: 4.0364 REMARK 3 L33: 0.9510 L12: 0.0137 REMARK 3 L13: -0.0540 L23: 0.3776 REMARK 3 S TENSOR REMARK 3 S11: 0.0325 S12: 0.1366 S13: 0.3184 REMARK 3 S21: -0.1556 S22: -0.0352 S23: -0.2514 REMARK 3 S31: -0.2039 S32: -0.0677 S33: 0.0027 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4B8V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1290053340. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91814 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31231 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 49.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 0.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ECP6 IN 20 MM HEPES, PH 7.0, AND 50 MM REMARK 280 NACL. CRYSTALS WERE OBTAINED BY MICRO-SEEDING, USING A RESERVOIR REMARK 280 WITH 200 MM AMMONIUM SULPHATE, 100 MM SODIUM ACETATE, PH 4.6, REMARK 280 AND 20-30% PEG MME 200 (W/V). REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.15333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.57667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 39.57667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 79.15333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 53.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 39.57667 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -28 REMARK 465 GLN A -27 REMARK 465 SER A -26 REMARK 465 MET A -25 REMARK 465 ILE A -24 REMARK 465 LEU A -23 REMARK 465 PHE A -22 REMARK 465 ALA A -21 REMARK 465 ALA A -20 REMARK 465 ALA A -19 REMARK 465 LEU A -18 REMARK 465 MET A -17 REMARK 465 GLY A -16 REMARK 465 ALA A -15 REMARK 465 ALA A -14 REMARK 465 VAL A -13 REMARK 465 ASN A -12 REMARK 465 GLY A -11 REMARK 465 PHE A -10 REMARK 465 VAL A -9 REMARK 465 LEU A -8 REMARK 465 PRO A -7 REMARK 465 ARG A -6 REMARK 465 THR A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 ASP A -1 REMARK 465 CYS A 0 REMARK 465 GLU A 1 REMARK 465 THR A 2 REMARK 465 LYS A 3 REMARK 465 ALA A 4 REMARK 465 THR A 5 REMARK 465 ASP A 6 REMARK 465 THR A 196 REMARK 465 ALA A 197 REMARK 465 VAL A 198 REMARK 465 ALA A 199 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLU A 140 O GLU A 140 5555 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 32 -169.10 -108.22 REMARK 500 ALA A 141 82.98 -164.13 REMARK 500 THR A 162 -157.38 -135.98 REMARK 500 ASN A 171 55.81 -140.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 GLMU EXISTS AS A BIFUNCTIONAL ENZYME IN MANY BACTERIA INCLUDING MTU, REMARK 600 CATALYSING TWO CONSECUTIVE REACTIONS-FIRST, ACETYLTRANSFERASE REMARK 600 REACTION CONVERTING ALPHA-D-GLUCOSAMINE-1-PHOSPHATE (GLCN1P)(NAG) REMARK 600 TO N-ACETYL-ALPHA-D-GLUCOSAMINE-1-PHOSPHATE (GLCNAC1P)(NDG). REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4B9H RELATED DB: PDB REMARK 900 CLADOSPORIUM FULVUM LYSM EFFECTOR ECP6 IN COMPLEX WITH A BETA-1,4- REMARK 900 LINKED N-ACETYL-D-GLUCOSAMINE TETRAMER: I3C HEAVY ATOM DERIVATIVE DBREF 4B8V A -28 199 UNP B3VBK9 B3VBK9_PASFU 1 228 SEQRES 1 A 228 MET GLN SER MET ILE LEU PHE ALA ALA ALA LEU MET GLY SEQRES 2 A 228 ALA ALA VAL ASN GLY PHE VAL LEU PRO ARG THR ASP ASP SEQRES 3 A 228 PRO ASP CYS GLU THR LYS ALA THR ASP CYS GLY SER THR SEQRES 4 A 228 SER ASN ILE LYS TYR THR VAL VAL LYS GLY ASP THR LEU SEQRES 5 A 228 THR SER ILE ALA LYS LYS PHE LYS SER GLY ILE CYS ASN SEQRES 6 A 228 ILE VAL SER VAL ASN LYS LEU ALA ASN PRO ASN LEU ILE SEQRES 7 A 228 GLU LEU GLY ALA THR LEU ILE ILE PRO GLU ASN CYS SER SEQRES 8 A 228 ASN PRO ASP ASN LYS SER CYS VAL SER THR PRO ALA GLU SEQRES 9 A 228 PRO THR GLU THR CYS VAL PRO GLY LEU PRO GLY SER TYR SEQRES 10 A 228 THR ILE VAL SER GLY ASP THR LEU THR ASN ILE SER GLN SEQRES 11 A 228 ASP PHE ASN ILE THR LEU ASP SER LEU ILE ALA ALA ASN SEQRES 12 A 228 THR GLN ILE GLU ASN PRO ASP ALA ILE ASP VAL GLY GLN SEQRES 13 A 228 ILE ILE THR VAL PRO VAL CYS PRO SER SER GLN CYS GLU SEQRES 14 A 228 ALA VAL GLY THR TYR ASN ILE VAL ALA GLY ASP LEU PHE SEQRES 15 A 228 VAL ASP LEU ALA ALA THR TYR HIS THR THR ILE GLY GLN SEQRES 16 A 228 ILE LYS ALA LEU ASN ASN ASN VAL ASN PRO SER LYS LEU SEQRES 17 A 228 LYS VAL GLY GLN GLN ILE ILE LEU PRO GLN ASP CYS LYS SEQRES 18 A 228 ASN VAL THR THR ALA VAL ALA MODRES 4B8V ASN A 104 ASN GLYCOSYLATION SITE MODRES 4B8V ASN A 193 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NDG C 1 15 HET NAG C 2 14 HET NAG C 3 14 HET NAG C 4 14 HET NAG A1198 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM NDG 2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE FORMUL 2 NAG 6(C8 H15 N O6) FORMUL 3 NDG C8 H15 N O6 FORMUL 5 HOH *119(H2 O) HELIX 1 1 THR A 22 PHE A 30 1 9 HELIX 2 2 GLY A 33 ASN A 41 1 9 HELIX 3 3 THR A 95 PHE A 103 1 9 HELIX 4 4 THR A 106 ALA A 113 1 8 HELIX 5 5 LEU A 152 HIS A 161 1 10 HELIX 6 6 THR A 163 ASN A 171 1 9 HELIX 7 7 ASN A 175 LEU A 179 5 5 SHEET 1 AA 2 SER A 11 THR A 16 0 SHEET 2 AA 2 THR A 54 GLU A 59 -1 O LEU A 55 N TYR A 15 SHEET 1 AB 2 SER A 87 THR A 89 0 SHEET 2 AB 2 ILE A 128 THR A 130 -1 O ILE A 129 N TYR A 88 SHEET 1 AC 2 SER A 137 CYS A 139 0 SHEET 2 AC 2 CYS A 191 ASN A 193 -1 O LYS A 192 N GLN A 138 SHEET 1 AD 2 GLY A 143 ASN A 146 0 SHEET 2 AD 2 GLN A 184 LEU A 187 -1 O ILE A 185 N TYR A 145 SSBOND 1 CYS A 7 CYS A 61 1555 1555 2.04 SSBOND 2 CYS A 35 CYS A 69 1555 1555 2.09 SSBOND 3 CYS A 80 CYS A 134 1555 1555 2.29 SSBOND 4 CYS A 139 CYS A 191 1555 1555 2.19 LINK ND2 ASN A 104 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 193 C1 NAG A1198 1555 1555 1.42 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.43 LINK O4 NDG C 1 C1 NAG C 2 1555 1555 1.40 LINK O4 NAG C 2 C1 NAG C 3 1555 1555 1.41 LINK O4 NAG C 3 C1 NAG C 4 1555 1555 1.40 CISPEP 1 LEU A 84 PRO A 85 0 -3.66 CRYST1 57.500 57.500 118.730 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017391 0.010041 0.000000 0.00000 SCALE2 0.000000 0.020082 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008422 0.00000