HEADER LYASE 14-SEP-12 4BAI TITLE MYCOBACTERIUM TUBERCULOSIS CHORISMATE SYNTHASE BEFORE EXPOSURE TO 266 TITLE 2 NM UV LASER COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHORISMATE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PHOSPHOLYASE; COMPND 5 EC: 4.2.3.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LYASE EXPDTA X-RAY DIFFRACTION AUTHOR P.J.B.PEREIRA,A.ROYANT,S.PANJIKAR,D.DE SANCTIS REVDAT 5 15-NOV-23 4BAI 1 REMARK LINK ATOM REVDAT 4 06-MAR-19 4BAI 1 REMARK LINK REVDAT 3 06-JUN-18 4BAI 1 REMARK REVDAT 2 04-APR-18 4BAI 1 JRNL REMARK REVDAT 1 17-APR-13 4BAI 0 JRNL AUTH P.J.PEREIRA,A.ROYANT,S.PANJIKAR,D.DE SANCTIS JRNL TITL IN-HOUSE UV RADIATION-DAMAGE-INDUCED PHASING OF JRNL TITL 2 SELENOMETHIONINE-LABELED PROTEIN STRUCTURES. JRNL REF J. STRUCT. BIOL. V. 181 89 2013 JRNL REFN ESSN 1095-8657 JRNL PMID 23178456 JRNL DOI 10.1016/J.JSB.2012.11.003 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.950 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 34935 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.8101 - 6.4542 0.92 2512 154 0.1717 0.1715 REMARK 3 2 6.4542 - 5.1954 0.97 2645 136 0.1938 0.1839 REMARK 3 3 5.1954 - 4.5606 0.98 2675 138 0.1506 0.1670 REMARK 3 4 4.5606 - 4.1537 0.96 2654 114 0.1452 0.1621 REMARK 3 5 4.1537 - 3.8616 0.96 2601 173 0.1428 0.1487 REMARK 3 6 3.8616 - 3.6375 0.97 2625 161 0.1575 0.1802 REMARK 3 7 3.6375 - 3.4578 0.98 2668 153 0.1713 0.2350 REMARK 3 8 3.4578 - 3.3090 0.99 2721 152 0.1773 0.1783 REMARK 3 9 3.3090 - 3.1829 1.00 2744 139 0.1917 0.2031 REMARK 3 10 3.1829 - 3.0741 1.00 2738 126 0.1981 0.2387 REMARK 3 11 3.0741 - 2.9788 1.00 2732 142 0.2014 0.2244 REMARK 3 12 2.9788 - 2.8943 1.00 2724 154 0.1978 0.2469 REMARK 3 13 2.8943 - 2.8186 1.00 2731 128 0.2026 0.2280 REMARK 3 14 2.8186 - 2.7503 1.00 2704 172 0.1906 0.2435 REMARK 3 15 2.7503 - 2.6881 1.00 2712 137 0.2026 0.2368 REMARK 3 16 2.6881 - 2.6313 1.00 2751 122 0.1986 0.2426 REMARK 3 17 2.6313 - 2.5789 1.00 2749 163 0.2040 0.2446 REMARK 3 18 2.5789 - 2.5305 0.98 2639 138 0.2087 0.2373 REMARK 3 19 2.5305 - 2.4855 0.97 2669 132 0.1992 0.2343 REMARK 3 20 2.4855 - 2.4436 0.86 2361 109 0.2082 0.2371 REMARK 3 21 2.4436 - 2.4043 0.79 2163 129 0.2236 0.2685 REMARK 3 22 2.4043 - 2.3675 0.74 1981 140 0.2210 0.2390 REMARK 3 23 2.3675 - 2.3328 0.68 1856 101 0.2318 0.2490 REMARK 3 24 2.3328 - 2.3001 0.65 1784 103 0.2385 0.2523 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.00 REMARK 3 B_SOL : 0.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2827 REMARK 3 ANGLE : 1.050 3837 REMARK 3 CHIRALITY : 0.069 440 REMARK 3 PLANARITY : 0.005 516 REMARK 3 DIHEDRAL : 13.510 1031 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BAI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1290054096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OXFORD DIFFRACTION GEMINI REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : AGILENT REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34968 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.8 M NH4-ACETATE, 0.1 M NA-ACETATE, REMARK 280 PH 4.5, VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.46667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 106.93333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 53.46667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 106.93333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.46667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 106.93333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 53.46667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 106.93333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -114.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 131.82000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 131.82000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NH2 ARG A 3 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2037 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2107 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 45 REMARK 465 ARG A 46 REMARK 465 GLY A 47 REMARK 465 ALA A 48 REMARK 465 ARG A 49 REMARK 465 MSE A 50 REMARK 465 THR A 51 REMARK 465 PHE A 52 REMARK 465 GLU A 53 REMARK 465 ARG A 54 REMARK 465 ASP A 55 REMARK 465 ARG A 341 REMARK 465 SER A 342 REMARK 465 ASP A 343 REMARK 465 VAL A 344 REMARK 465 GLU A 393 REMARK 465 ALA A 394 REMARK 465 PRO A 395 REMARK 465 ALA A 396 REMARK 465 ALA A 397 REMARK 465 ARG A 398 REMARK 465 VAL A 399 REMARK 465 SER A 400 REMARK 465 GLY A 401 REMARK 465 HIS A 402 REMARK 465 HIS A 403 REMARK 465 HIS A 404 REMARK 465 HIS A 405 REMARK 465 HIS A 406 REMARK 465 HIS A 407 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 387 O HOH A 2106 1.59 REMARK 500 OH TYR A 44 OE2 GLU A 210 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 3 HH21 ARG A 3 11655 0.86 REMARK 500 NH2 ARG A 3 HH22 ARG A 3 11655 0.86 REMARK 500 CZ ARG A 3 HH22 ARG A 3 11655 1.27 REMARK 500 CZ ARG A 3 NH2 ARG A 3 11655 1.34 REMARK 500 CZ ARG A 3 HH21 ARG A 3 11655 1.54 REMARK 500 NH1 ARG A 3 HH22 ARG A 3 11655 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 257 -3.48 74.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 3 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1394 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZTB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHORISMATE SYNTHASE FROM REMARK 900 MYCOBACTERIUMTUBERCULOSIS REMARK 900 RELATED ID: 4BAJ RELATED DB: PDB REMARK 900 MYCOBACTERIUM TUBERCULOSIS CHORISMATE SYNTHASE AFTER EXPOSURE TO REMARK 900 266NM UV LASER DBREF 4BAI A 1 401 UNP P63611 AROC_MYCTU 1 401 SEQADV 4BAI HIS A 402 UNP P63611 EXPRESSION TAG SEQADV 4BAI HIS A 403 UNP P63611 EXPRESSION TAG SEQADV 4BAI HIS A 404 UNP P63611 EXPRESSION TAG SEQADV 4BAI HIS A 405 UNP P63611 EXPRESSION TAG SEQADV 4BAI HIS A 406 UNP P63611 EXPRESSION TAG SEQADV 4BAI HIS A 407 UNP P63611 EXPRESSION TAG SEQRES 1 A 407 MSE LEU ARG TRP ILE THR ALA GLY GLU SER HIS GLY ARG SEQRES 2 A 407 ALA LEU VAL ALA VAL VAL GLU GLY MSE VAL ALA GLY VAL SEQRES 3 A 407 HIS VAL THR SER ALA ASP ILE ALA ASP GLN LEU ALA ARG SEQRES 4 A 407 ARG ARG LEU GLY TYR GLY ARG GLY ALA ARG MSE THR PHE SEQRES 5 A 407 GLU ARG ASP ALA VAL THR VAL LEU SER GLY ILE ARG HIS SEQRES 6 A 407 GLY SER THR LEU GLY GLY PRO ILE ALA ILE GLU ILE GLY SEQRES 7 A 407 ASN THR GLU TRP PRO LYS TRP GLU THR VAL MSE ALA ALA SEQRES 8 A 407 ASP PRO VAL ASP PRO ALA GLU LEU ALA ASP VAL ALA ARG SEQRES 9 A 407 ASN ALA PRO LEU THR ARG PRO ARG PRO GLY HIS ALA ASP SEQRES 10 A 407 TYR ALA GLY MSE LEU LYS TYR GLY PHE ASP ASP ALA ARG SEQRES 11 A 407 PRO VAL LEU GLU ARG ALA SER ALA ARG GLU THR ALA ALA SEQRES 12 A 407 ARG VAL ALA ALA GLY THR VAL ALA ARG ALA PHE LEU ARG SEQRES 13 A 407 GLN ALA LEU GLY VAL GLU VAL LEU SER HIS VAL ILE SER SEQRES 14 A 407 ILE GLY ALA SER ALA PRO TYR GLU GLY PRO PRO PRO ARG SEQRES 15 A 407 ALA GLU ASP LEU PRO ALA ILE ASP ALA SER PRO VAL ARG SEQRES 16 A 407 ALA TYR ASP LYS ALA ALA GLU ALA ASP MSE ILE ALA GLN SEQRES 17 A 407 ILE GLU ALA ALA LYS LYS ASP GLY ASP THR LEU GLY GLY SEQRES 18 A 407 VAL VAL GLU ALA VAL ALA LEU GLY LEU PRO VAL GLY LEU SEQRES 19 A 407 GLY SER PHE THR SER GLY ASP HIS ARG LEU ASP SER GLN SEQRES 20 A 407 LEU ALA ALA ALA VAL MSE GLY ILE GLN ALA ILE LYS GLY SEQRES 21 A 407 VAL GLU ILE GLY ASP GLY PHE GLN THR ALA ARG ARG ARG SEQRES 22 A 407 GLY SER ARG ALA HIS ASP GLU MSE TYR PRO GLY PRO ASP SEQRES 23 A 407 GLY VAL VAL ARG SER THR ASN ARG ALA GLY GLY LEU GLU SEQRES 24 A 407 GLY GLY MSE THR ASN GLY GLN PRO LEU ARG VAL ARG ALA SEQRES 25 A 407 ALA MSE LYS PRO ILE SER THR VAL PRO ARG ALA LEU ALA SEQRES 26 A 407 THR VAL ASP LEU ALA THR GLY ASP GLU ALA VAL ALA ILE SEQRES 27 A 407 HIS GLN ARG SER ASP VAL CYS ALA VAL PRO ALA ALA GLY SEQRES 28 A 407 VAL VAL VAL GLU THR MSE VAL ALA LEU VAL LEU ALA ARG SEQRES 29 A 407 ALA ALA LEU GLU LYS PHE GLY GLY ASP SER LEU ALA GLU SEQRES 30 A 407 THR GLN ARG ASN ILE ALA ALA TYR GLN ARG SER VAL ALA SEQRES 31 A 407 ASP ARG GLU ALA PRO ALA ALA ARG VAL SER GLY HIS HIS SEQRES 32 A 407 HIS HIS HIS HIS MODRES 4BAI MSE A 1 MET SELENOMETHIONINE MODRES 4BAI MSE A 22 MET SELENOMETHIONINE MODRES 4BAI MSE A 89 MET SELENOMETHIONINE MODRES 4BAI MSE A 121 MET SELENOMETHIONINE MODRES 4BAI MSE A 205 MET SELENOMETHIONINE MODRES 4BAI MSE A 253 MET SELENOMETHIONINE MODRES 4BAI MSE A 281 MET SELENOMETHIONINE MODRES 4BAI MSE A 302 MET SELENOMETHIONINE MODRES 4BAI MSE A 314 MET SELENOMETHIONINE MODRES 4BAI MSE A 357 MET SELENOMETHIONINE HET MSE A 1 19 HET MSE A 22 17 HET MSE A 89 17 HET MSE A 121 17 HET MSE A 205 17 HET MSE A 253 17 HET MSE A 281 17 HET MSE A 302 17 HET MSE A 314 17 HET MSE A 357 17 HET ACT A1393 7 HET ACT A1394 7 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 4 HOH *110(H2 O) HELIX 1 1 THR A 29 ARG A 41 1 13 HELIX 2 2 GLU A 81 GLU A 86 1 6 HELIX 3 3 ASP A 95 ASP A 101 1 7 HELIX 4 4 VAL A 102 ALA A 106 5 5 HELIX 5 5 ALA A 116 GLY A 125 1 10 HELIX 6 6 ALA A 129 SER A 137 1 9 HELIX 7 7 GLU A 140 GLY A 160 1 21 HELIX 8 8 ARG A 182 GLU A 184 5 3 HELIX 9 9 ASP A 185 SER A 192 1 8 HELIX 10 10 ASP A 198 ASP A 215 1 18 HELIX 11 11 ARG A 243 GLY A 254 1 12 HELIX 12 12 ASP A 265 ALA A 270 1 6 HELIX 13 13 ARG A 273 HIS A 278 1 6 HELIX 14 14 ALA A 346 GLY A 371 1 26 HELIX 15 15 SER A 374 ARG A 392 1 19 SHEET 1 AA 4 ARG A 3 ALA A 7 0 SHEET 2 AA 4 ALA A 14 GLU A 20 -1 O VAL A 16 N ALA A 7 SHEET 3 AA 4 ILE A 73 GLY A 78 -1 O ILE A 73 N VAL A 19 SHEET 4 AA 4 VAL A 57 SER A 61 -1 O THR A 58 N GLU A 76 SHEET 1 AB 2 ILE A 63 ARG A 64 0 SHEET 2 AB 2 SER A 67 THR A 68 -1 O SER A 67 N ARG A 64 SHEET 1 AC 4 GLU A 162 ILE A 170 0 SHEET 2 AC 4 GLY A 221 LEU A 228 -1 O VAL A 222 N ILE A 168 SHEET 3 AC 4 LEU A 308 MSE A 314 -1 O LEU A 308 N ALA A 227 SHEET 4 AC 4 ILE A 258 ILE A 263 -1 N LYS A 259 O ALA A 313 SHEET 1 AD 2 MSE A 281 TYR A 282 0 SHEET 2 AD 2 VAL A 289 ARG A 290 -1 O VAL A 289 N TYR A 282 SHEET 1 AE 2 LEU A 298 GLU A 299 0 SHEET 2 AE 2 MSE A 302 THR A 303 -1 O MSE A 302 N GLU A 299 SHEET 1 AF 2 ALA A 325 VAL A 327 0 SHEET 2 AF 2 GLU A 334 VAL A 336 -1 O ALA A 335 N THR A 326 LINK C MSE A 1 N LEU A 2 1555 1555 1.32 LINK C GLY A 21 N MSE A 22 1555 1555 1.33 LINK C MSE A 22 N VAL A 23 1555 1555 1.34 LINK C VAL A 88 N MSE A 89 1555 1555 1.33 LINK C MSE A 89 N ALA A 90 1555 1555 1.33 LINK C GLY A 120 N MSE A 121 1555 1555 1.33 LINK C MSE A 121 N LEU A 122 1555 1555 1.33 LINK C ASP A 204 N MSE A 205 1555 1555 1.33 LINK C MSE A 205 N ILE A 206 1555 1555 1.33 LINK C VAL A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N GLY A 254 1555 1555 1.33 LINK C GLU A 280 N MSE A 281 1555 1555 1.33 LINK C MSE A 281 N TYR A 282 1555 1555 1.33 LINK C GLY A 301 N MSE A 302 1555 1555 1.33 LINK C MSE A 302 N THR A 303 1555 1555 1.33 LINK C ALA A 313 N MSE A 314 1555 1555 1.33 LINK C MSE A 314 N LYS A 315 1555 1555 1.33 LINK C THR A 356 N MSE A 357 1555 1555 1.32 LINK C MSE A 357 N VAL A 358 1555 1555 1.34 SITE 1 AC1 8 TRP A 4 ASP A 241 ALA A 250 MSE A 357 SITE 2 AC1 8 HOH A2004 HOH A2050 HOH A2099 HOH A2110 SITE 1 AC2 6 ALA A 172 GLN A 208 LEU A 219 ARG A 271 SITE 2 AC2 6 ARG A 273 HOH A2068 CRYST1 131.820 131.820 160.400 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007586 0.004380 0.000000 0.00000 SCALE2 0.000000 0.008760 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006234 0.00000 HETATM 1 N MSE A 1 55.303 4.459 -0.347 1.00 54.23 N HETATM 2 CA MSE A 1 56.158 4.152 0.796 1.00 46.06 C HETATM 3 C MSE A 1 56.946 5.377 1.263 1.00 28.25 C HETATM 4 O MSE A 1 57.840 5.893 0.585 1.00 27.16 O HETATM 5 CB MSE A 1 57.074 2.965 0.498 1.00 47.21 C HETATM 6 CG MSE A 1 57.996 3.149 -0.696 1.00 48.04 C HETATM 7 SE MSE A 1 59.844 3.262 -0.069 1.00120.16 SE HETATM 8 CE MSE A 1 59.565 2.877 1.850 1.00 43.20 C HETATM 9 H2 MSE A 1 55.023 3.642 -0.766 1.00 54.23 H HETATM 10 H MSE A 1 55.792 4.991 -0.979 1.00 54.23 H HETATM 11 H3 MSE A 1 54.532 4.946 -0.048 1.00 54.23 H HETATM 12 HA MSE A 1 55.576 3.877 1.535 1.00 46.06 H HETATM 13 HB2 MSE A 1 57.631 2.802 1.275 1.00 47.21 H HETATM 14 HB3 MSE A 1 56.523 2.186 0.325 1.00 47.21 H HETATM 15 HG2 MSE A 1 57.916 2.388 -1.292 1.00 48.04 H HETATM 16 HG3 MSE A 1 57.773 3.972 -1.158 1.00 48.04 H HETATM 17 HE1 MSE A 1 58.980 3.542 2.220 1.00 43.20 H HETATM 18 HE2 MSE A 1 59.169 2.007 1.939 1.00 43.20 H HETATM 19 HE3 MSE A 1 60.413 2.899 2.299 1.00 43.20 H