HEADER VIRAL PROTEIN 21-SEP-12 4BBB TITLE THE STRUCTURE OF VACCINIA VIRUS N1 Q61Y MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: N1L; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: N1L PROTEIN, VACV-DUKE-037, VACV026, VIROKINE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: C40S MUTATION WAS INTRODUCED TO AVOID INTERMOLECULAR COMPND 8 DISULPHIDE BOND DRIVEN AGGREGATION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VACCINIA VIRUS; SOURCE 3 ORGANISM_TAXID: 696871; SOURCE 4 STRAIN: WESTERN RESERVE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET24A KEYWDS VIRAL PROTEIN, BCL-LIKE PROTEIN, APOPTOSIS, VIRULENCE FACTOR EXPDTA X-RAY DIFFRACTION AUTHOR C.MALUQUER DE MOTES,S.COORAY,K.MCGOURTY,H.REN,M.W.BAHAR,D.I.STUART, AUTHOR 2 J.M.GRIMES,S.C.GRAHAM,G.L.SMITH REVDAT 2 20-DEC-23 4BBB 1 REMARK REVDAT 1 03-OCT-12 4BBB 0 JRNL AUTH C.MALUQUER DE MOTES,S.COORAY,H.REN,G.M.F.ALMEIDA,K.MCGOURTY, JRNL AUTH 2 M.W.BAHAR,D.I.STUART,J.M.GRIMES,S.C.GRAHAM,G.L.SMITH JRNL TITL INHIBITION OF APOPTOSIS AND NF-KAPPAB ACTIVATION BY VACCINIA JRNL TITL 2 PROTEIN N1 OCCUR VIA DISTINCT BINDING SURFACES AND MAKE JRNL TITL 3 DIFFERENT CONTRIBUTIONS TO VIRULENCE. JRNL REF PLOS PATHOG. V. 7 2430 2011 JRNL REFN ISSN 1553-7366 JRNL PMID 22194685 JRNL DOI 10.1371/JOURNAL.PPAT.1002430 REMARK 2 REMARK 2 RESOLUTION. 3.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 18134 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 918 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.09 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.28 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2826 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2566 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2676 REMARK 3 BIN R VALUE (WORKING SET) : 0.2541 REMARK 3 BIN FREE R VALUE : 0.2979 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.31 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 150 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5703 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 105.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 106.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 11.76510 REMARK 3 B22 (A**2) : -3.73550 REMARK 3 B33 (A**2) : -8.02960 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -13.98880 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.773 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5790 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7806 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2166 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 179 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 803 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5790 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 763 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7055 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.01 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.18 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.89 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 1-114 REMARK 3 ORIGIN FOR THE GROUP (A): 35.3762 -14.5769 -16.7133 REMARK 3 T TENSOR REMARK 3 T11: -0.1062 T22: -0.0684 REMARK 3 T33: 0.0398 T12: -0.0793 REMARK 3 T13: -0.2123 T23: -0.0774 REMARK 3 L TENSOR REMARK 3 L11: 5.1173 L22: 7.3897 REMARK 3 L33: 8.4468 L12: -0.0466 REMARK 3 L13: -1.9725 L23: -1.2180 REMARK 3 S TENSOR REMARK 3 S11: -0.3093 S12: 0.9124 S13: -0.6304 REMARK 3 S21: -1.0741 S22: 0.4179 S23: 0.5741 REMARK 3 S31: 1.1160 S32: -0.3594 S33: -0.1085 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND RESID 1-114 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5335 30.6870 -15.7351 REMARK 3 T TENSOR REMARK 3 T11: -0.1341 T22: -0.1857 REMARK 3 T33: 0.3548 T12: -0.1129 REMARK 3 T13: 0.3037 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 5.5720 L22: 7.2942 REMARK 3 L33: 7.6326 L12: -0.3064 REMARK 3 L13: -0.9165 L23: -2.9615 REMARK 3 S TENSOR REMARK 3 S11: -0.2199 S12: 0.0893 S13: -0.2294 REMARK 3 S21: 0.5895 S22: 0.3669 S23: 0.8318 REMARK 3 S31: -0.1510 S32: -1.3745 S33: -0.1470 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C AND RESID 1-114 REMARK 3 ORIGIN FOR THE GROUP (A): -3.1536 7.1696 -30.1920 REMARK 3 T TENSOR REMARK 3 T11: -0.0041 T22: -0.0992 REMARK 3 T33: 0.0230 T12: -0.1175 REMARK 3 T13: 0.1818 T23: 0.0610 REMARK 3 L TENSOR REMARK 3 L11: 9.0283 L22: 5.4099 REMARK 3 L33: 6.7171 L12: -0.4278 REMARK 3 L13: -3.5742 L23: 0.9677 REMARK 3 S TENSOR REMARK 3 S11: 0.7609 S12: 0.6978 S13: 1.1570 REMARK 3 S21: -0.8255 S22: -0.1317 S23: -0.4795 REMARK 3 S31: -1.0125 S32: -0.2478 S33: -0.6292 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D AND RESID 1-114 REMARK 3 ORIGIN FOR THE GROUP (A): 5.9182 -9.7547 -16.8053 REMARK 3 T TENSOR REMARK 3 T11: -0.1268 T22: 0.2951 REMARK 3 T33: -0.0104 T12: -0.0376 REMARK 3 T13: -0.1371 T23: 0.0550 REMARK 3 L TENSOR REMARK 3 L11: 5.6257 L22: 8.1951 REMARK 3 L33: 8.0919 L12: -1.0780 REMARK 3 L13: -2.5194 L23: 2.3141 REMARK 3 S TENSOR REMARK 3 S11: -0.2237 S12: -1.2087 S13: -0.4190 REMARK 3 S21: 1.1513 S22: 0.1572 S23: -0.5152 REMARK 3 S31: 0.8265 S32: 0.9799 S33: 0.0664 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN E AND RESID 1-114 REMARK 3 ORIGIN FOR THE GROUP (A): 35.3970 26.7060 -17.3782 REMARK 3 T TENSOR REMARK 3 T11: -0.0507 T22: -0.3042 REMARK 3 T33: 0.3533 T12: -0.0173 REMARK 3 T13: 0.2037 T23: -0.0663 REMARK 3 L TENSOR REMARK 3 L11: 5.5784 L22: 4.7432 REMARK 3 L33: 6.8434 L12: -0.3310 REMARK 3 L13: -0.5406 L23: 0.7398 REMARK 3 S TENSOR REMARK 3 S11: 0.0078 S12: 0.3083 S13: -0.3312 REMARK 3 S21: -0.0896 S22: -0.0106 S23: -0.4887 REMARK 3 S31: 0.2588 S32: 0.7056 S33: 0.0028 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN F AND RESID 1-114 REMARK 3 ORIGIN FOR THE GROUP (A): 39.9054 4.6526 -4.4987 REMARK 3 T TENSOR REMARK 3 T11: -0.0766 T22: 0.0041 REMARK 3 T33: 0.0537 T12: -0.0609 REMARK 3 T13: 0.1331 T23: -0.1747 REMARK 3 L TENSOR REMARK 3 L11: 8.5626 L22: 5.5278 REMARK 3 L33: 5.0780 L12: 0.2038 REMARK 3 L13: -2.1232 L23: -0.2071 REMARK 3 S TENSOR REMARK 3 S11: 0.6939 S12: -1.1974 S13: 0.8556 REMARK 3 S21: 0.8336 S22: -0.0984 S23: 0.5330 REMARK 3 S31: -0.8687 S32: 0.4723 S33: -0.5955 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY REMARK 4 REMARK 4 4BBB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1290054168. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9330 REMARK 200 MONOCHROMATOR : ASYMMETRIC LAUE 001 REMARK 200 OPTICS : TOROIDAL ZERODUR MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18168 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 42.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.99000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BUSTER-TNT REMARK 200 STARTING MODEL: PDB ID 2I39 REMARK 200 REMARK 200 REMARK: SOLVED BY ISOMORPHOUS DIFFERENCE FOURIER SYNTHESIS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 54.92400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 115 REMARK 465 GLU A 116 REMARK 465 LYS A 117 REMARK 465 LEU A 118 REMARK 465 GLU A 119 REMARK 465 HIS A 120 REMARK 465 HIS A 121 REMARK 465 HIS A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 GLY B 115 REMARK 465 GLU B 116 REMARK 465 LYS B 117 REMARK 465 LEU B 118 REMARK 465 GLU B 119 REMARK 465 HIS B 120 REMARK 465 HIS B 121 REMARK 465 HIS B 122 REMARK 465 HIS B 123 REMARK 465 HIS B 124 REMARK 465 HIS B 125 REMARK 465 GLY C 115 REMARK 465 GLU C 116 REMARK 465 LYS C 117 REMARK 465 LEU C 118 REMARK 465 GLU C 119 REMARK 465 HIS C 120 REMARK 465 HIS C 121 REMARK 465 HIS C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 HIS C 125 REMARK 465 THR D 18 REMARK 465 TYR D 19 REMARK 465 TYR D 20 REMARK 465 ASN D 21 REMARK 465 GLY D 115 REMARK 465 GLU D 116 REMARK 465 LYS D 117 REMARK 465 LEU D 118 REMARK 465 GLU D 119 REMARK 465 HIS D 120 REMARK 465 HIS D 121 REMARK 465 HIS D 122 REMARK 465 HIS D 123 REMARK 465 HIS D 124 REMARK 465 HIS D 125 REMARK 465 GLY E 115 REMARK 465 GLU E 116 REMARK 465 LYS E 117 REMARK 465 LEU E 118 REMARK 465 GLU E 119 REMARK 465 HIS E 120 REMARK 465 HIS E 121 REMARK 465 HIS E 122 REMARK 465 HIS E 123 REMARK 465 HIS E 124 REMARK 465 HIS E 125 REMARK 465 GLY F 115 REMARK 465 GLU F 116 REMARK 465 LYS F 117 REMARK 465 LEU F 118 REMARK 465 GLU F 119 REMARK 465 HIS F 120 REMARK 465 HIS F 121 REMARK 465 HIS F 122 REMARK 465 HIS F 123 REMARK 465 HIS F 124 REMARK 465 HIS F 125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP D 16 100.73 -50.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2I39 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF VACCINIA VIRUS N1L PROTEIN REMARK 900 RELATED ID: 2UXE RELATED DB: PDB REMARK 900 THE STRUCTURE OF VACCINIA VIRUS N1 REMARK 900 RELATED ID: 4BBC RELATED DB: PDB REMARK 900 THE STRUCTURE OF VACCINIA VIRUS N1 R71Y MUTANT REMARK 900 RELATED ID: 4BBD RELATED DB: PDB REMARK 900 THE STRUCTURE OF VACCINIA VIRUS N1 R58Y MUTANT REMARK 999 REMARK 999 SEQUENCE REMARK 999 Q61Y IS FUNCTIONAL MUTATION. C40S MUTATION WAS INTRODUCED REMARK 999 TO AVOID INTERMOLECULAR DISULPHIDE BOND DRIVEN AGGREGATION REMARK 999 (AS PDB ID 2UXE). C-TERMINAL LEHHHHHH SEQUENCE DERIVES REMARK 999 FROM EXPRESSION VECTOR. DBREF 4BBB A 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBB B 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBB C 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBB D 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBB E 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBB F 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 SEQADV 4BBB LEU A 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB GLU A 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS A 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS A 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS A 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS A 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS A 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS A 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB SER A 40 UNP Q49PX0 CYS 40 CONFLICT SEQADV 4BBB TYR A 61 UNP Q49PX0 GLN 61 CONFLICT SEQADV 4BBB LEU B 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB GLU B 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS B 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS B 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS B 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS B 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS B 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS B 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB SER B 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBB TYR B 61 UNP Q49PX0 GLN 61 ENGINEERED MUTATION SEQADV 4BBB LEU C 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB GLU C 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS C 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS C 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS C 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS C 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS C 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS C 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB SER C 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBB TYR C 61 UNP Q49PX0 GLN 61 ENGINEERED MUTATION SEQADV 4BBB LEU D 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB GLU D 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS D 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS D 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS D 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS D 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS D 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS D 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB SER D 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBB TYR D 61 UNP Q49PX0 GLN 61 ENGINEERED MUTATION SEQADV 4BBB LEU E 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB GLU E 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS E 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS E 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS E 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS E 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS E 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS E 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB SER E 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBB TYR E 61 UNP Q49PX0 GLN 61 ENGINEERED MUTATION SEQADV 4BBB LEU F 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB GLU F 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS F 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS F 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS F 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS F 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS F 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB HIS F 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBB SER F 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBB TYR F 61 UNP Q49PX0 GLN 61 ENGINEERED MUTATION SEQRES 1 A 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 A 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 A 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 A 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 A 125 GLY PRO LEU LEU ASP ARG LEU ASN TYR PRO VAL ASN ASN SEQRES 6 A 125 ILE GLU ASP ALA LYS ARG MET ILE ALA ILE SER ALA LYS SEQRES 7 A 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 A 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 A 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 A 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 B 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 B 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 B 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 B 125 GLY PRO LEU LEU ASP ARG LEU ASN TYR PRO VAL ASN ASN SEQRES 6 B 125 ILE GLU ASP ALA LYS ARG MET ILE ALA ILE SER ALA LYS SEQRES 7 B 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 B 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 B 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 B 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 C 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 C 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 C 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 C 125 GLY PRO LEU LEU ASP ARG LEU ASN TYR PRO VAL ASN ASN SEQRES 6 C 125 ILE GLU ASP ALA LYS ARG MET ILE ALA ILE SER ALA LYS SEQRES 7 C 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 C 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 C 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 C 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 D 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 D 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 D 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 D 125 GLY PRO LEU LEU ASP ARG LEU ASN TYR PRO VAL ASN ASN SEQRES 6 D 125 ILE GLU ASP ALA LYS ARG MET ILE ALA ILE SER ALA LYS SEQRES 7 D 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 D 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 D 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 D 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 E 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 E 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 E 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 E 125 GLY PRO LEU LEU ASP ARG LEU ASN TYR PRO VAL ASN ASN SEQRES 6 E 125 ILE GLU ASP ALA LYS ARG MET ILE ALA ILE SER ALA LYS SEQRES 7 E 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 E 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 E 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 E 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 F 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 F 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 F 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 F 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 F 125 GLY PRO LEU LEU ASP ARG LEU ASN TYR PRO VAL ASN ASN SEQRES 6 F 125 ILE GLU ASP ALA LYS ARG MET ILE ALA ILE SER ALA LYS SEQRES 7 F 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 F 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 F 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 F 125 LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 MET A 1 ASN A 15 1 15 HELIX 2 2 ASP A 16 TYR A 20 5 5 HELIX 3 3 ASP A 23 LEU A 29 1 7 HELIX 4 4 LEU A 30 VAL A 34 5 5 HELIX 5 5 ASP A 35 LEU A 50 1 16 HELIX 6 6 ASP A 52 ASN A 60 1 9 HELIX 7 7 ASN A 65 GLY A 84 1 20 HELIX 8 8 ARG A 90 GLU A 103 1 14 HELIX 9 9 TYR A 105 TYR A 114 1 10 HELIX 10 10 MET B 1 ASN B 15 1 15 HELIX 11 11 ASP B 16 TYR B 20 5 5 HELIX 12 12 ASP B 23 LEU B 29 1 7 HELIX 13 13 LEU B 30 VAL B 34 5 5 HELIX 14 14 ASP B 35 LEU B 50 1 16 HELIX 15 15 ASP B 52 ASN B 60 1 9 HELIX 16 16 ASN B 65 GLY B 84 1 20 HELIX 17 17 ARG B 90 GLU B 103 1 14 HELIX 18 18 TYR B 105 TYR B 114 1 10 HELIX 19 19 MET C 1 ASN C 15 1 15 HELIX 20 20 ASP C 16 TYR C 20 5 5 HELIX 21 21 ASP C 23 LEU C 29 1 7 HELIX 22 22 LEU C 30 VAL C 34 5 5 HELIX 23 23 ASP C 35 LEU C 50 1 16 HELIX 24 24 ASP C 52 ASN C 60 1 9 HELIX 25 25 ASN C 65 GLY C 84 1 20 HELIX 26 26 ARG C 90 GLU C 103 1 14 HELIX 27 27 TYR C 105 TYR C 114 1 10 HELIX 28 28 MET D 1 ASN D 15 1 15 HELIX 29 29 ASP D 23 LEU D 29 1 7 HELIX 30 30 LEU D 30 VAL D 34 5 5 HELIX 31 31 ASP D 35 LEU D 50 1 16 HELIX 32 32 ASP D 52 ASN D 60 1 9 HELIX 33 33 ASN D 65 GLY D 84 1 20 HELIX 34 34 ARG D 90 GLU D 103 1 14 HELIX 35 35 TYR D 105 TYR D 114 1 10 HELIX 36 36 MET E 1 ASN E 15 1 15 HELIX 37 37 ASP E 16 TYR E 20 5 5 HELIX 38 38 ASP E 23 LEU E 29 1 7 HELIX 39 39 LEU E 30 VAL E 34 5 5 HELIX 40 40 ASP E 35 LEU E 50 1 16 HELIX 41 41 ASP E 52 ASN E 60 1 9 HELIX 42 42 ASN E 65 GLY E 84 1 20 HELIX 43 43 ARG E 90 GLU E 103 1 14 HELIX 44 44 TYR E 105 TYR E 114 1 10 HELIX 45 45 MET F 1 ASN F 15 1 15 HELIX 46 46 ASN F 21 LEU F 29 1 9 HELIX 47 47 LEU F 30 VAL F 34 5 5 HELIX 48 48 ASP F 35 LEU F 50 1 16 HELIX 49 49 ASP F 52 ASN F 60 1 9 HELIX 50 50 ASN F 65 GLY F 84 1 20 HELIX 51 51 ARG F 90 GLU F 103 1 14 HELIX 52 52 TYR F 105 TYR F 114 1 10 CRYST1 69.718 109.848 70.346 90.00 110.85 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014343 0.000000 0.005463 0.00000 SCALE2 0.000000 0.009103 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015212 0.00000