HEADER VIRAL PROTEIN 21-SEP-12 4BBC TITLE THE STRUCTURE OF VACCINIA VIRUS N1 R71Y MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: N1L; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: N1L PROTEIN, VACV-DUKE-037, VACV026, VIROKINE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: C40S MUTATION WAS INTRODUCED TO AVOID INTERMOLECULAR COMPND 8 DISULPHIDE BOND DRIVEN AGGREGATION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VACCINIA VIRUS; SOURCE 3 ORGANISM_TAXID: 696871; SOURCE 4 STRAIN: WESTERN RESERVE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET24A KEYWDS VIRAL PROTEIN, BCL-LIKE PROTEIN, APOPTOSIS, VIRULENCE FACTOR EXPDTA X-RAY DIFFRACTION AUTHOR C.MALUQUER DE MOTES,S.COORAY,K.MCGOURTY,H.REN,M.W.BAHAR,D.I.STUART, AUTHOR 2 J.M.GRIMES,S.C.GRAHAM,G.L.SMITH REVDAT 2 20-DEC-23 4BBC 1 REMARK REVDAT 1 03-OCT-12 4BBC 0 JRNL AUTH C.MALUQUER DE MOTES,S.COORAY,H.REN,G.M.F.ALMEIDA,K.MCGOURTY, JRNL AUTH 2 M.W.BAHAR,D.I.STUART,J.M.GRIMES,S.C.GRAHAM,G.L.SMITH JRNL TITL INHIBITION OF APOPTOSIS AND NF-KAPPAB ACTIVATION BY VACCINIA JRNL TITL 2 PROTEIN N1 OCCUR VIA DISTINCT BINDING SURFACES AND MAKE JRNL TITL 3 DIFFERENT CONTRIBUTIONS TO VIRULENCE. JRNL REF PLOS PATHOG. V. 7 2430 2011 JRNL REFN ISSN 1553-7366 JRNL PMID 22194685 JRNL DOI 10.1371/JOURNAL.PPAT.1002430 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 18233 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 926 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.29 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2902 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2418 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2746 REMARK 3 BIN R VALUE (WORKING SET) : 0.2407 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.38 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 156 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5711 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 107.9 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 111.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 15.95270 REMARK 3 B22 (A**2) : 4.81490 REMARK 3 B33 (A**2) : -20.76760 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -14.54800 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.744 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5799 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7823 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2160 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 186 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 800 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5799 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 765 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6970 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.04 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.23 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.72 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 1 - 114 REMARK 3 ORIGIN FOR THE GROUP (A): 35.8029 -14.6702 -16.6051 REMARK 3 T TENSOR REMARK 3 T11: -0.1898 T22: -0.2605 REMARK 3 T33: -0.1194 T12: -0.0948 REMARK 3 T13: -0.2754 T23: -0.1518 REMARK 3 L TENSOR REMARK 3 L11: 5.4948 L22: 8.3087 REMARK 3 L33: 7.5071 L12: 0.8784 REMARK 3 L13: -2.8663 L23: -1.9916 REMARK 3 S TENSOR REMARK 3 S11: -0.2566 S12: 0.9891 S13: -0.5847 REMARK 3 S21: -1.3099 S22: 0.4172 S23: 0.4600 REMARK 3 S31: 1.0859 S32: -0.3752 S33: -0.1606 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND RESID 1 - 114 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5230 30.8549 -16.2441 REMARK 3 T TENSOR REMARK 3 T11: -0.1184 T22: -0.1162 REMARK 3 T33: 0.1948 T12: -0.1211 REMARK 3 T13: 0.1652 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 5.0134 L22: 6.3382 REMARK 3 L33: 7.6153 L12: -0.3062 REMARK 3 L13: -1.5466 L23: -2.7457 REMARK 3 S TENSOR REMARK 3 S11: -0.2391 S12: 0.1583 S13: -0.1683 REMARK 3 S21: 0.4119 S22: 0.4652 S23: 0.8638 REMARK 3 S31: 0.0778 S32: -1.3576 S33: -0.2261 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C AND RESID 1 - 114 REMARK 3 ORIGIN FOR THE GROUP (A): -3.3435 7.3545 -30.8561 REMARK 3 T TENSOR REMARK 3 T11: -0.0597 T22: -0.2131 REMARK 3 T33: -0.0687 T12: -0.1498 REMARK 3 T13: 0.0743 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 8.8635 L22: 5.1990 REMARK 3 L33: 7.2733 L12: -0.6483 REMARK 3 L13: -2.5069 L23: 0.3619 REMARK 3 S TENSOR REMARK 3 S11: 0.6222 S12: 0.6873 S13: 1.0498 REMARK 3 S21: -0.9016 S22: -0.0765 S23: -0.3344 REMARK 3 S31: -0.9490 S32: 0.0751 S33: -0.5458 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D AND RESID 1 - 114 REMARK 3 ORIGIN FOR THE GROUP (A): 5.8744 -9.6404 -17.2907 REMARK 3 T TENSOR REMARK 3 T11: -0.1832 T22: 0.4859 REMARK 3 T33: -0.1824 T12: 0.0945 REMARK 3 T13: -0.2211 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 4.5289 L22: 8.5206 REMARK 3 L33: 8.2052 L12: -1.1479 REMARK 3 L13: -2.3045 L23: 2.5392 REMARK 3 S TENSOR REMARK 3 S11: -0.3415 S12: -1.4556 S13: -0.2238 REMARK 3 S21: 1.2280 S22: 0.5583 S23: -0.4794 REMARK 3 S31: 0.9028 S32: 1.5203 S33: -0.2168 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN E AND RESID 1 - 114 REMARK 3 ORIGIN FOR THE GROUP (A): 35.3009 26.7356 -17.8375 REMARK 3 T TENSOR REMARK 3 T11: -0.0514 T22: -0.3824 REMARK 3 T33: 0.2577 T12: -0.0120 REMARK 3 T13: 0.1523 T23: -0.0533 REMARK 3 L TENSOR REMARK 3 L11: 5.4703 L22: 4.5530 REMARK 3 L33: 7.2272 L12: 0.4634 REMARK 3 L13: -0.5507 L23: 0.4904 REMARK 3 S TENSOR REMARK 3 S11: -0.2060 S12: 0.4890 S13: -0.4476 REMARK 3 S21: -0.2145 S22: 0.0279 S23: -0.6829 REMARK 3 S31: 0.4811 S32: 0.5643 S33: 0.1780 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN F AND RESID 1 - 114 REMARK 3 ORIGIN FOR THE GROUP (A): 40.3061 4.8025 -5.0459 REMARK 3 T TENSOR REMARK 3 T11: 0.0369 T22: -0.0658 REMARK 3 T33: 0.2241 T12: -0.0410 REMARK 3 T13: 0.0993 T23: -0.2543 REMARK 3 L TENSOR REMARK 3 L11: 8.8508 L22: 4.1636 REMARK 3 L33: 5.0191 L12: 0.9058 REMARK 3 L13: -1.6271 L23: -1.2776 REMARK 3 S TENSOR REMARK 3 S11: 0.6838 S12: -0.9926 S13: 1.0385 REMARK 3 S21: 0.7201 S22: -0.0360 S23: 0.6987 REMARK 3 S31: -0.7452 S32: 0.2322 S33: -0.6478 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BBC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1290054179. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9900 REMARK 200 MONOCHROMATOR : DOUBLE SI(111) CRYSTAL REMARK 200 OPTICS : KIRKPATRICK BAEZ BIMORPH MIRROR REMARK 200 PAIR FOR HORIZONTAL AND VERTICAL REMARK 200 FOCUSSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18280 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.74000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BUSTER-TNT REMARK 200 STARTING MODEL: PDB ID 2I39 REMARK 200 REMARK 200 REMARK: SOLVED BY ISOMORPHOUS DIFFERENCE FOURIER SYNTHESIS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 54.46000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 115 REMARK 465 GLU A 116 REMARK 465 LYS A 117 REMARK 465 LEU A 118 REMARK 465 GLU A 119 REMARK 465 HIS A 120 REMARK 465 HIS A 121 REMARK 465 HIS A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 GLY B 115 REMARK 465 GLU B 116 REMARK 465 LYS B 117 REMARK 465 LEU B 118 REMARK 465 GLU B 119 REMARK 465 HIS B 120 REMARK 465 HIS B 121 REMARK 465 HIS B 122 REMARK 465 HIS B 123 REMARK 465 HIS B 124 REMARK 465 HIS B 125 REMARK 465 GLY C 115 REMARK 465 GLU C 116 REMARK 465 LYS C 117 REMARK 465 LEU C 118 REMARK 465 GLU C 119 REMARK 465 HIS C 120 REMARK 465 HIS C 121 REMARK 465 HIS C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 HIS C 125 REMARK 465 THR D 18 REMARK 465 TYR D 19 REMARK 465 GLY D 115 REMARK 465 GLU D 116 REMARK 465 LYS D 117 REMARK 465 LEU D 118 REMARK 465 GLU D 119 REMARK 465 HIS D 120 REMARK 465 HIS D 121 REMARK 465 HIS D 122 REMARK 465 HIS D 123 REMARK 465 HIS D 124 REMARK 465 HIS D 125 REMARK 465 GLY E 115 REMARK 465 GLU E 116 REMARK 465 LYS E 117 REMARK 465 LEU E 118 REMARK 465 GLU E 119 REMARK 465 HIS E 120 REMARK 465 HIS E 121 REMARK 465 HIS E 122 REMARK 465 HIS E 123 REMARK 465 HIS E 124 REMARK 465 HIS E 125 REMARK 465 GLY F 115 REMARK 465 GLU F 116 REMARK 465 LYS F 117 REMARK 465 LEU F 118 REMARK 465 GLU F 119 REMARK 465 HIS F 120 REMARK 465 HIS F 121 REMARK 465 HIS F 122 REMARK 465 HIS F 123 REMARK 465 HIS F 124 REMARK 465 HIS F 125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN F 15 17.77 51.52 REMARK 500 THR F 18 -60.70 -129.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2I39 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF VACCINIA VIRUS N1L PROTEIN REMARK 900 RELATED ID: 2UXE RELATED DB: PDB REMARK 900 THE STRUCTURE OF VACCINIA VIRUS N1 REMARK 900 RELATED ID: 4BBB RELATED DB: PDB REMARK 900 THE STRUCTURE OF VACCINIA VIRUS N1 Q61Y MUTANT REMARK 900 RELATED ID: 4BBD RELATED DB: PDB REMARK 900 THE STRUCTURE OF VACCINIA VIRUS N1 R58Y MUTANT REMARK 999 REMARK 999 SEQUENCE REMARK 999 R71Y IS FUNCTIONAL MUTATION. C40S MUTATION WAS INTRODUCED REMARK 999 TO AVOID INTERMOLECULAR DISULPHIDE BOND DRIVEN AGGREGATION REMARK 999 (AS PDB ID 2UXE). C-TERMINAL LEHHHHHH SEQUENCE DERIVES REMARK 999 FROM EXPRESSION VECTOR. DBREF 4BBC A 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBC B 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBC C 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBC D 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBC E 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 DBREF 4BBC F 1 117 UNP Q49PX0 Q49PX0_9POXV 1 117 SEQADV 4BBC LEU A 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC GLU A 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS A 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS A 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS A 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS A 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS A 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS A 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC SER A 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBC TYR A 71 UNP Q49PX0 ARG 71 ENGINEERED MUTATION SEQADV 4BBC LEU B 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC GLU B 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS B 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS B 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS B 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS B 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS B 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS B 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC SER B 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBC TYR B 71 UNP Q49PX0 ARG 71 ENGINEERED MUTATION SEQADV 4BBC LEU C 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC GLU C 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS C 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS C 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS C 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS C 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS C 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS C 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC SER C 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBC TYR C 71 UNP Q49PX0 ARG 71 ENGINEERED MUTATION SEQADV 4BBC LEU D 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC GLU D 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS D 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS D 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS D 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS D 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS D 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS D 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC SER D 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBC TYR D 71 UNP Q49PX0 ARG 71 ENGINEERED MUTATION SEQADV 4BBC LEU E 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC GLU E 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS E 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS E 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS E 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS E 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS E 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS E 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC SER E 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBC TYR E 71 UNP Q49PX0 ARG 71 ENGINEERED MUTATION SEQADV 4BBC LEU F 118 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC GLU F 119 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS F 120 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS F 121 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS F 122 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS F 123 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS F 124 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC HIS F 125 UNP Q49PX0 EXPRESSION TAG SEQADV 4BBC SER F 40 UNP Q49PX0 CYS 40 ENGINEERED MUTATION SEQADV 4BBC TYR F 71 UNP Q49PX0 ARG 71 ENGINEERED MUTATION SEQRES 1 A 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 A 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 A 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 A 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 A 125 GLY PRO LEU LEU ASP ARG LEU ASN GLN PRO VAL ASN ASN SEQRES 6 A 125 ILE GLU ASP ALA LYS TYR MET ILE ALA ILE SER ALA LYS SEQRES 7 A 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 A 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 A 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 A 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 B 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 B 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 B 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 B 125 GLY PRO LEU LEU ASP ARG LEU ASN GLN PRO VAL ASN ASN SEQRES 6 B 125 ILE GLU ASP ALA LYS TYR MET ILE ALA ILE SER ALA LYS SEQRES 7 B 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 B 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 B 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 B 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 C 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 C 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 C 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 C 125 GLY PRO LEU LEU ASP ARG LEU ASN GLN PRO VAL ASN ASN SEQRES 6 C 125 ILE GLU ASP ALA LYS TYR MET ILE ALA ILE SER ALA LYS SEQRES 7 C 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 C 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 C 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 C 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 D 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 D 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 D 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 D 125 GLY PRO LEU LEU ASP ARG LEU ASN GLN PRO VAL ASN ASN SEQRES 6 D 125 ILE GLU ASP ALA LYS TYR MET ILE ALA ILE SER ALA LYS SEQRES 7 D 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 D 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 D 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 D 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 E 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 E 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 E 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 E 125 GLY PRO LEU LEU ASP ARG LEU ASN GLN PRO VAL ASN ASN SEQRES 6 E 125 ILE GLU ASP ALA LYS TYR MET ILE ALA ILE SER ALA LYS SEQRES 7 E 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 E 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 E 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 E 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 F 125 MET ARG THR LEU LEU ILE ARG TYR ILE LEU TRP ARG ASN SEQRES 2 F 125 ASP ASN ASP GLN THR TYR TYR ASN ASP ASP PHE LYS LYS SEQRES 3 F 125 LEU MET LEU LEU ASP GLU LEU VAL ASP ASP GLY ASP VAL SEQRES 4 F 125 SER THR LEU ILE LYS ASN MET ARG MET THR LEU SER ASP SEQRES 5 F 125 GLY PRO LEU LEU ASP ARG LEU ASN GLN PRO VAL ASN ASN SEQRES 6 F 125 ILE GLU ASP ALA LYS TYR MET ILE ALA ILE SER ALA LYS SEQRES 7 F 125 VAL ALA ARG ASP ILE GLY GLU ARG SER GLU ILE ARG TRP SEQRES 8 F 125 GLU GLU SER PHE THR ILE LEU PHE ARG MET ILE GLU THR SEQRES 9 F 125 TYR PHE ASP ASP LEU MET ILE ASP LEU TYR GLY GLU LYS SEQRES 10 F 125 LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 MET A 1 ASN A 15 1 15 HELIX 2 2 ASP A 16 TYR A 20 5 5 HELIX 3 3 ASP A 23 LEU A 29 1 7 HELIX 4 4 LEU A 30 VAL A 34 5 5 HELIX 5 5 ASP A 35 LEU A 50 1 16 HELIX 6 6 ASP A 52 ASN A 60 1 9 HELIX 7 7 ASN A 65 GLY A 84 1 20 HELIX 8 8 ARG A 90 GLU A 103 1 14 HELIX 9 9 TYR A 105 TYR A 114 1 10 HELIX 10 10 MET B 1 ASN B 15 1 15 HELIX 11 11 ASP B 16 TYR B 20 5 5 HELIX 12 12 ASP B 23 LEU B 29 1 7 HELIX 13 13 LEU B 30 VAL B 34 5 5 HELIX 14 14 ASP B 35 LEU B 50 1 16 HELIX 15 15 ASP B 52 ASN B 60 1 9 HELIX 16 16 ASN B 65 GLY B 84 1 20 HELIX 17 17 ARG B 90 GLU B 103 1 14 HELIX 18 18 TYR B 105 TYR B 114 1 10 HELIX 19 19 MET C 1 ASN C 15 1 15 HELIX 20 20 ASP C 16 TYR C 20 5 5 HELIX 21 21 ASP C 23 LEU C 29 1 7 HELIX 22 22 LEU C 30 VAL C 34 5 5 HELIX 23 23 ASP C 35 LEU C 50 1 16 HELIX 24 24 ASP C 52 ASN C 60 1 9 HELIX 25 25 ASN C 65 GLY C 84 1 20 HELIX 26 26 ARG C 90 GLU C 103 1 14 HELIX 27 27 TYR C 105 TYR C 114 1 10 HELIX 28 28 MET D 1 ASP D 14 1 14 HELIX 29 29 ASN D 21 LEU D 29 1 9 HELIX 30 30 LEU D 30 VAL D 34 5 5 HELIX 31 31 ASP D 35 LEU D 50 1 16 HELIX 32 32 ASP D 52 ASN D 60 1 9 HELIX 33 33 ASN D 65 GLY D 84 1 20 HELIX 34 34 ARG D 90 GLU D 103 1 14 HELIX 35 35 TYR D 105 TYR D 114 1 10 HELIX 36 36 MET E 1 ASN E 15 1 15 HELIX 37 37 ASP E 16 TYR E 20 5 5 HELIX 38 38 ASP E 22 LEU E 29 1 8 HELIX 39 39 LEU E 30 VAL E 34 5 5 HELIX 40 40 ASP E 35 LEU E 50 1 16 HELIX 41 41 ASP E 52 ASN E 60 1 9 HELIX 42 42 ASN E 65 GLY E 84 1 20 HELIX 43 43 ARG E 90 GLU E 103 1 14 HELIX 44 44 TYR E 105 TYR E 114 1 10 HELIX 45 45 MET F 1 ASN F 15 1 15 HELIX 46 46 ASN F 21 LEU F 29 1 9 HELIX 47 47 LEU F 30 VAL F 34 5 5 HELIX 48 48 ASP F 35 LEU F 50 1 16 HELIX 49 49 ASP F 52 ASN F 60 1 9 HELIX 50 50 ASN F 65 GLY F 84 1 20 HELIX 51 51 ARG F 90 GLU F 103 1 14 HELIX 52 52 TYR F 105 TYR F 114 1 10 CRYST1 69.910 108.920 71.570 90.00 110.80 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014304 0.000000 0.005434 0.00000 SCALE2 0.000000 0.009181 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014946 0.00000