HEADER CELL ADHESION 25-SEP-12 4BBK TITLE STRUCTURAL AND FUNCTIONAL CHARACTERISATION OF THE KINDLIN-1 PLECKSTRIN TITLE 2 HOMOLOGY DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERMITIN FAMILY HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PLECKSTRIN HOMOLOGY DOMAIN, RESIDUES 178-323; COMPND 5 SYNONYM: KINDLIN-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA (PLYSS/RARE); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: POPINF KEYWDS PH DOMAIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR L.A.YATES,C.N.LUMB,N.N.BRAHME,R.ZALYTE,L.E.BIRD,L.DE COLIBUS, AUTHOR 2 R.J.OWENS,D.A.CALDERWOOD,M.S.P.SANSOM,R.J.C.GILBERT REVDAT 4 20-DEC-23 4BBK 1 REMARK REVDAT 3 16-JAN-13 4BBK 1 JRNL REVDAT 2 21-NOV-12 4BBK 1 JRNL REVDAT 1 14-NOV-12 4BBK 0 JRNL AUTH L.A.YATES,C.N.LUMB,N.N.BRAHME,R.ZALYTE,L.E.BIRD, JRNL AUTH 2 L.DE COLIBUS,R.J.OWENS,D.A.CALDERWOOD,M.S.P.SANSOM, JRNL AUTH 3 R.J.C.GILBERT JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERISATION OF THE KINDLIN-1 JRNL TITL 2 PLECKSTRIN HOMOLOGY DOMAIN JRNL REF J.BIOL.CHEM. V. 287 43246 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 23132860 JRNL DOI 10.1074/JBC.M112.422089 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 10323 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 483 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.7393 - 3.0288 0.95 3371 153 0.1780 0.2030 REMARK 3 2 3.0288 - 2.4041 0.95 3256 161 0.1828 0.2284 REMARK 3 3 2.4041 - 2.1003 0.95 3213 169 0.1988 0.2266 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 54.39 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.69550 REMARK 3 B22 (A**2) : 14.27070 REMARK 3 B33 (A**2) : -11.57520 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1011 REMARK 3 ANGLE : 1.011 1356 REMARK 3 CHIRALITY : 0.068 145 REMARK 3 PLANARITY : 0.005 169 REMARK 3 DIHEDRAL : 14.770 388 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 370:378) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8275 -13.4135 -16.6145 REMARK 3 T TENSOR REMARK 3 T11: 0.2492 T22: 0.2654 REMARK 3 T33: 0.3207 T12: 0.0844 REMARK 3 T13: -0.0460 T23: -0.0671 REMARK 3 L TENSOR REMARK 3 L11: 4.1069 L22: 0.6937 REMARK 3 L33: 6.5276 L12: 1.3925 REMARK 3 L13: 0.0424 L23: 1.0470 REMARK 3 S TENSOR REMARK 3 S11: -0.4317 S12: -0.3151 S13: 0.3691 REMARK 3 S21: 0.1144 S22: 0.0230 S23: 0.2141 REMARK 3 S31: -0.6568 S32: -1.0810 S33: 0.5109 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 379:390) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3319 -27.4055 -15.4295 REMARK 3 T TENSOR REMARK 3 T11: 0.6782 T22: 0.4543 REMARK 3 T33: 0.7415 T12: -0.2188 REMARK 3 T13: 0.1663 T23: 0.0750 REMARK 3 L TENSOR REMARK 3 L11: 8.1204 L22: 5.9013 REMARK 3 L33: 2.8824 L12: -4.0778 REMARK 3 L13: 1.4552 L23: -3.8921 REMARK 3 S TENSOR REMARK 3 S11: 0.3538 S12: -0.2295 S13: -1.8316 REMARK 3 S21: -0.3716 S22: -0.9264 S23: 0.0664 REMARK 3 S31: 2.1110 S32: -0.5337 S33: 0.3366 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 391:418) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8374 -14.5609 -14.2879 REMARK 3 T TENSOR REMARK 3 T11: 0.2293 T22: 0.6514 REMARK 3 T33: 0.3734 T12: 0.0568 REMARK 3 T13: 0.0766 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: 4.8852 L22: 1.4696 REMARK 3 L33: 4.3218 L12: 0.7174 REMARK 3 L13: 0.0681 L23: 0.2347 REMARK 3 S TENSOR REMARK 3 S11: -0.0039 S12: -0.1315 S13: 0.2546 REMARK 3 S21: 0.2094 S22: -0.2403 S23: 0.4932 REMARK 3 S31: -0.1494 S32: -1.9324 S33: 0.1017 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 419:447) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9335 -21.2398 -6.4586 REMARK 3 T TENSOR REMARK 3 T11: 0.3187 T22: 0.2105 REMARK 3 T33: 0.2308 T12: -0.0057 REMARK 3 T13: 0.0331 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 6.3339 L22: 1.9312 REMARK 3 L33: 8.1702 L12: 1.6919 REMARK 3 L13: -3.1570 L23: -0.5674 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: -0.6403 S13: -0.0606 REMARK 3 S21: 0.3374 S22: -0.1453 S23: -0.0129 REMARK 3 S31: 0.8145 S32: 0.2764 S33: 0.3765 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 448:454) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9206 -24.5193 -8.2451 REMARK 3 T TENSOR REMARK 3 T11: 0.4501 T22: 0.2877 REMARK 3 T33: 0.4420 T12: -0.0780 REMARK 3 T13: 0.0888 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 4.6543 L22: 2.5593 REMARK 3 L33: 3.0411 L12: 1.2119 REMARK 3 L13: -0.9650 L23: -2.4312 REMARK 3 S TENSOR REMARK 3 S11: -0.6402 S12: -0.3547 S13: -1.1004 REMARK 3 S21: 0.1143 S22: -0.4228 S23: -0.5651 REMARK 3 S31: 1.3049 S32: -0.4451 S33: 0.7014 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 455:489) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8426 -9.3157 -9.2299 REMARK 3 T TENSOR REMARK 3 T11: 0.2319 T22: 0.1491 REMARK 3 T33: 0.2474 T12: 0.0174 REMARK 3 T13: -0.0320 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 3.4124 L22: 5.3719 REMARK 3 L33: 7.7126 L12: 0.3504 REMARK 3 L13: -0.1293 L23: 1.8472 REMARK 3 S TENSOR REMARK 3 S11: -0.0267 S12: -0.0923 S13: 0.3799 REMARK 3 S21: 0.1798 S22: -0.1944 S23: -0.0575 REMARK 3 S31: -0.6474 S32: 0.0938 S33: 0.1437 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 490:497) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4018 -12.9522 -14.9308 REMARK 3 T TENSOR REMARK 3 T11: 0.1468 T22: 1.1089 REMARK 3 T33: 0.8597 T12: -0.0140 REMARK 3 T13: 0.0449 T23: -0.2110 REMARK 3 L TENSOR REMARK 3 L11: 6.0179 L22: 5.3180 REMARK 3 L33: 4.9306 L12: 0.5997 REMARK 3 L13: -5.0247 L23: 1.4940 REMARK 3 S TENSOR REMARK 3 S11: 0.2595 S12: 0.3609 S13: 0.2085 REMARK 3 S21: -0.4409 S22: 0.4111 S23: -1.1615 REMARK 3 S31: 0.3015 S32: 2.2999 S33: 0.0551 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: A LOOP FROM RESIDUES 381-387 WAS REMARK 3 DISORDERED IN THE STRUCTURE AND WAS THEREFORE NOT MODELLED. REMARK 4 REMARK 4 4BBK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1290054192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9745 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : SI (111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR. KIRKPATRICK BAEZ REMARK 200 BIMORPH MIRROR PAIR FOR REMARK 200 HORIZONTAL AND VERTICAL FOCUSSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10324 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.56000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2YS3 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5MG/ML - 12MG/ML IN 20MM TRIS-HCL, PH REMARK 280 7.5, 200MM NACL, 0.5MM TCEP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.99500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.99500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 22.64500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.39000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 22.64500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.39000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.99500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 22.64500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.39000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.99500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 22.64500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.39000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2005 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 345 REMARK 465 ALA A 346 REMARK 465 HIS A 347 REMARK 465 HIS A 348 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 HIS A 351 REMARK 465 HIS A 352 REMARK 465 SER A 353 REMARK 465 SER A 354 REMARK 465 GLY A 355 REMARK 465 LEU A 356 REMARK 465 GLU A 357 REMARK 465 VAL A 358 REMARK 465 LEU A 359 REMARK 465 PHE A 360 REMARK 465 GLN A 361 REMARK 465 GLY A 362 REMARK 465 PRO A 363 REMARK 465 GLU A 364 REMARK 465 ASP A 365 REMARK 465 ILE A 366 REMARK 465 THR A 367 REMARK 465 ASP A 368 REMARK 465 ILE A 369 REMARK 465 PRO A 381 REMARK 465 LYS A 382 REMARK 465 LYS A 383 REMARK 465 LEU A 384 REMARK 465 MET A 385 REMARK 465 LEU A 386 REMARK 465 LYS A 387 REMARK 465 ARG A 498 REMARK 465 ASN A 499 REMARK 465 SER A 500 REMARK 465 SER A 501 REMARK 465 PRO A 502 REMARK 465 LEU A 503 REMARK 465 VAL A 504 REMARK 465 ALA A 505 REMARK 465 SER A 506 REMARK 465 SER A 507 REMARK 465 LEU A 508 REMARK 465 GLU A 509 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2015 O HOH A 2016 1.86 REMARK 500 NZ LYS A 390 O HOH A 2015 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 398 -120.61 59.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1498 REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE IS A FRAGMENT - THE PH DOMAIN - AND INCLUDES THE REMARK 999 CLONING ARTEFACT HIS6 TAG DBREF 4BBK A 364 509 UNP E9Q7J9 E9Q7J9_MOUSE 178 323 SEQADV 4BBK MET A 345 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK ALA A 346 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK HIS A 347 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK HIS A 348 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK HIS A 349 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK HIS A 350 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK HIS A 351 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK HIS A 352 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK SER A 353 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK SER A 354 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK GLY A 355 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK LEU A 356 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK GLU A 357 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK VAL A 358 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK LEU A 359 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK PHE A 360 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK GLN A 361 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK GLY A 362 UNP E9Q7J9 EXPRESSION TAG SEQADV 4BBK PRO A 363 UNP E9Q7J9 EXPRESSION TAG SEQRES 1 A 165 MET ALA HIS HIS HIS HIS HIS HIS SER SER GLY LEU GLU SEQRES 2 A 165 VAL LEU PHE GLN GLY PRO GLU ASP ILE THR ASP ILE PRO SEQRES 3 A 165 LYS LEU ALA ASP TYR LEU LYS LEU PHE ARG PRO LYS LYS SEQRES 4 A 165 LEU MET LEU LYS ALA CYS LYS GLN TYR TRP PHE VAL PHE SEQRES 5 A 165 LYS ASP THR SER ILE ALA TYR PHE LYS ASN LYS GLU LEU SEQRES 6 A 165 GLU GLN GLY GLU PRO ILE GLU LYS LEU ASN LEU ARG GLY SEQRES 7 A 165 CYS GLU ILE VAL PRO ASP VAL ASN VAL SER GLY ARG LYS SEQRES 8 A 165 PHE GLY ILE LYS LEU LEU ILE PRO VAL ALA ASP GLY MET SEQRES 9 A 165 ASN GLU VAL TYR LEU ARG CYS ASP HIS GLU ASP GLN TYR SEQRES 10 A 165 ALA ARG TRP MET ALA ALA CYS ILE LEU ALA SER LYS GLY SEQRES 11 A 165 LYS THR MET ALA ASP SER SER TYR GLN PRO GLU VAL ILE SEQRES 12 A 165 SER ILE LEU SER PHE LEU LYS MET LYS ASN ARG ASN SER SEQRES 13 A 165 SER PRO LEU VAL ALA SER SER LEU GLU HET GOL A1498 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *49(H2 O) HELIX 1 1 ASN A 406 GLU A 410 5 5 HELIX 2 2 HIS A 457 LYS A 473 1 17 HELIX 3 3 SER A 481 ASN A 497 1 17 SHEET 1 AA 7 GLU A 416 ASN A 419 0 SHEET 2 AA 7 SER A 400 PHE A 404 -1 O ILE A 401 N LEU A 418 SHEET 3 AA 7 LYS A 390 LYS A 397 -1 O TRP A 393 N PHE A 404 SHEET 4 AA 7 LEU A 372 PHE A 379 -1 O LEU A 372 N PHE A 396 SHEET 5 AA 7 GLY A 447 CYS A 455 -1 O TYR A 452 N PHE A 379 SHEET 6 AA 7 LYS A 435 VAL A 444 -1 O PHE A 436 N CYS A 455 SHEET 7 AA 7 GLU A 424 ASN A 430 -1 O GLU A 424 N LEU A 441 SITE 1 AC1 6 ILE A 425 VAL A 444 ALA A 445 ASP A 446 SITE 2 AC1 6 HOH A2029 HOH A2037 CRYST1 45.290 82.780 95.990 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022080 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012080 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010418 0.00000