HEADER    OXIDOREDUCTASE                          27-SEP-12   4BBQ              
TITLE     CRYSTAL STRUCTURE OF THE CXXC AND PHD DOMAIN OF HUMAN LYSINE-SPECIFIC 
TITLE    2 DEMETHYLASE 2A (KDM2A)(FBXL11)                                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 2A;                            
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 FRAGMENT: CXXC AND PHD DOMAIN, RESIDUES 567-681;                     
COMPND   5 SYNONYM: CXXC-TYPE ZINC FINGER PROTEIN 8, F-BOX AND LEUCINE-RICH     
COMPND   6 REPEAT PROTEIN 11, F-BOX PROTEIN FBL7, F-BOX PROTEIN LILINA, F-      
COMPND   7 BOX/LRR-REPEAT PROTEIN 11, JMJC DOMAIN-CONTAINING HISTONE            
COMPND   8 DEMETHYLATION PROTEIN 1A, [HISTONE-H3]-LYSINE-36 DEMETHYLASE 1A;     
COMPND   9 EC: 1.14.11.27;                                                      
COMPND  10 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   8 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2;                                
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4                               
KEYWDS    OXIDOREDUCTASE, UBIQUITIN, LIGASE, UBIQUITINATION, DEMETHYLATION, ZF- 
KEYWDS   2 CXXC DNA BINDING DOMAIN, CPG ISLAND, CHROMATIN, KDM2A, FBXL11        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    C.K.ALLERSTON,A.A.WATSON,C.EDLICH,B.LI,Y.CHEN,L.BALL,T.KROJER,        
AUTHOR   2 C.H.ARROWSMITH,A.EDWARDS,C.BOUNTRA,F.VON DELFT,E.D.LAUE,O.GILEADI    
REVDAT   3   08-MAY-24 4BBQ    1       REMARK LINK                              
REVDAT   2   24-JAN-18 4BBQ    1       AUTHOR JRNL                              
REVDAT   1   10-OCT-12 4BBQ    0                                                
JRNL        AUTH   C.K.ALLERSTON,A.A.WATSON,C.EDLICH,B.LI,Y.CHEN,L.BALL,        
JRNL        AUTH 2 T.KROJER,C.H.ARROWSMITH,A.EDWARDS,C.BOUNTRA,F.VON DELFT,     
JRNL        AUTH 3 E.D.LAUE,O.GILEADI                                           
JRNL        TITL   CRYSTAL STRUCTURE OF THE CXXC AND PHD DOMAIN OF HUMAN        
JRNL        TITL 2 LYSINE-SPECIFIC DEMETHYLASE 2A (KDM2A)(FBXL11)               
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.24 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : BUSTER 2.11.2                                        
REMARK   3   AUTHORS     : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,              
REMARK   3               : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,              
REMARK   3               : WOMACK,MATTHEWS,TEN EYCK,TRONRUD                     
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 90.79                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 13045                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD           : THROUGHOUT                     
REMARK   3   FREE R VALUE TEST SET SELECTION   : RANDOM                         
REMARK   3   R VALUE     (WORKING + TEST SET)  : 0.198                          
REMARK   3   R VALUE            (WORKING SET)  : 0.197                          
REMARK   3   FREE R VALUE                      : 0.221                          
REMARK   3   FREE R VALUE TEST SET SIZE   (%)  : 4.930                          
REMARK   3   FREE R VALUE TEST SET COUNT       : 643                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE   : NULL                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED               : 7                        
REMARK   3   BIN RESOLUTION RANGE HIGH   (ANGSTROMS) : 2.24                     
REMARK   3   BIN RESOLUTION RANGE LOW    (ANGSTROMS) : 2.42                     
REMARK   3   BIN COMPLETENESS (WORKING+TEST)     (%) : 98.98                    
REMARK   3   REFLECTIONS IN BIN (WORKING + TEST SET) : 2666                     
REMARK   3   BIN R VALUE        (WORKING + TEST SET) : 0.2015                   
REMARK   3   REFLECTIONS IN BIN        (WORKING SET) : 2530                     
REMARK   3   BIN R VALUE               (WORKING SET) : 0.1996                   
REMARK   3   BIN FREE R VALUE                        : 0.2343                   
REMARK   3   BIN FREE R VALUE TEST SET SIZE      (%) : 5.10                     
REMARK   3   BIN FREE R VALUE TEST SET COUNT         : 136                      
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE     : NULL                     
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 1564                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 12                                      
REMARK   3   SOLVENT ATOMS            : 106                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 39.61                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 48.63                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -11.99380                                            
REMARK   3    B22 (A**2) : 8.55890                                              
REMARK   3    B33 (A**2) : 3.43490                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 6.32550                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT                    (A) : 0.311               
REMARK   3   DPI (BLOW EQ-10) BASED ON R VALUE        (A) : 0.246               
REMARK   3   DPI (BLOW EQ-9) BASED ON FREE R VALUE    (A) : 0.182               
REMARK   3   DPI (CRUICKSHANK) BASED ON R VALUE       (A) : 0.225               
REMARK   3   DPI (CRUICKSHANK) BASED ON FREE R VALUE  (A) : 0.176               
REMARK   3                                                                      
REMARK   3   REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797                
REMARK   3               CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601     
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.919                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.889                         
REMARK   3                                                                      
REMARK   3   NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15                    
REMARK   3   TERM                          COUNT    WEIGHT   FUNCTION.          
REMARK   3    BOND LENGTHS              : 1592   ; 2.000  ; HARMONIC            
REMARK   3    BOND ANGLES               : 2139   ; 2.000  ; HARMONIC            
REMARK   3    TORSION ANGLES            : 750    ; 2.000  ; SINUSOIDAL          
REMARK   3    TRIGONAL CARBON PLANES    : 32     ; 2.000  ; HARMONIC            
REMARK   3    GENERAL PLANES            : 238    ; 5.000  ; HARMONIC            
REMARK   3    ISOTROPIC THERMAL FACTORS : 1592   ; 20.000 ; HARMONIC            
REMARK   3    BAD NON-BONDED CONTACTS   : 2      ; 5.000  ; SEMIHARMONIC        
REMARK   3    IMPROPER TORSIONS         : NULL   ; NULL   ; NULL                
REMARK   3    PSEUDOROTATION ANGLES     : NULL   ; NULL   ; NULL                
REMARK   3    CHIRAL IMPROPER TORSION   : 204    ; 5.000  ; SEMIHARMONIC        
REMARK   3    SUM OF OCCUPANCIES        : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY DISTANCES         : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY ANGLES            : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY TORSION           : NULL   ; NULL   ; NULL                
REMARK   3    IDEAL-DIST CONTACT TERM   : 1756   ; 4.000  ; SEMIHARMONIC        
REMARK   3                                                                      
REMARK   3   RMS DEVIATIONS FROM IDEAL VALUES.                                  
REMARK   3    BOND LENGTHS                       (A) : 0.010                    
REMARK   3    BOND ANGLES                  (DEGREES) : 1.09                     
REMARK   3    PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.41                     
REMARK   3    OTHER TORSION ANGLES         (DEGREES) : 2.95                     
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 2                                          
REMARK   3                                                                      
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN A                                                
REMARK   3    ORIGIN FOR THE GROUP (A):    4.1910   17.1060   65.8942           
REMARK   3    T TENSOR                                                          
REMARK   3     T11:    0.0153 T22:   -0.0778                                    
REMARK   3     T33:   -0.0405 T12:    0.0121                                    
REMARK   3     T13:   -0.0536 T23:   -0.0313                                    
REMARK   3    L TENSOR                                                          
REMARK   3     L11:    0.3334 L22:    2.0309                                    
REMARK   3     L33:    3.6596 L12:   -0.6868                                    
REMARK   3     L13:    1.1002 L23:   -2.9205                                    
REMARK   3    S TENSOR                                                          
REMARK   3     S11:    0.0444 S12:   -0.0131 S13:    0.0308                     
REMARK   3     S21:    0.2050 S22:   -0.0626 S23:   -0.0736                     
REMARK   3     S31:   -0.3318 S32:    0.2827 S33:    0.0181                     
REMARK   3                                                                      
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: CHAIN B                                                
REMARK   3    ORIGIN FOR THE GROUP (A):  -21.5774  -15.4700   71.4614           
REMARK   3    T TENSOR                                                          
REMARK   3     T11:   -0.0532 T22:   -0.0139                                    
REMARK   3     T33:   -0.0864 T12:    0.0064                                    
REMARK   3     T13:    0.0381 T23:    0.0218                                    
REMARK   3    L TENSOR                                                          
REMARK   3     L11:    1.4599 L22:    2.5425                                    
REMARK   3     L33:    4.3012 L12:    1.5757                                    
REMARK   3     L13:   -2.1276 L23:   -2.8803                                    
REMARK   3    S TENSOR                                                          
REMARK   3     S11:    0.0013 S12:    0.3406 S13:    0.0871                     
REMARK   3     S21:   -0.1763 S22:    0.1028 S23:   -0.1209                     
REMARK   3     S31:    0.1941 S32:   -0.0664 S33:   -0.1041                     
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP.    
REMARK   3  RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=ZN. NUMBER WITH     
REMARK   3  APPROX DEFAULT CCP4 ATOM TYPE=0. NUMBER TREATED BY BAD NON-         
REMARK   3  BONDED CONTACTS=8.                                                  
REMARK   4                                                                      
REMARK   4 4BBQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-SEP-12.                  
REMARK 100 THE DEPOSITION ID IS D_1290054219.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 04-AUG-12                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : DIAMOND                            
REMARK 200  BEAMLINE                       : I04-1                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.92                               
REMARK 200  MONOCHROMATOR                  : DOUBLE CRYSTAL                     
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC CCD                           
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : AUTOPROC                           
REMARK 200  DATA SCALING SOFTWARE          : AP_SCALE                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 13091                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.240                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 90.790                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.7                               
REMARK 200  DATA REDUNDANCY                : 7.500                              
REMARK 200  R MERGE                    (I) : 0.08000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 16.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.36                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 98.2                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 7.50                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.49000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.800                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD                          
REMARK 200 SOFTWARE USED: SHARP                                                 
REMARK 200 STARTING MODEL: NONE                                                 
REMARK 200                                                                      
REMARK 200 REMARK: ANOMALOUS SCATTERING FROM ENDOGENOUS ZINC USED FOR PHASING   
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 51.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, PH 6.5, 20%(W/V) PEG      
REMARK 280  METHYL ETHER 5000, PH 7.5                                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       15.02650            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     SER A    -1                                                      
REMARK 465     GLN A   677                                                      
REMARK 465     GLU A   678                                                      
REMARK 465     ASP A   679                                                      
REMARK 465     SER A   680                                                      
REMARK 465     SER A   681                                                      
REMARK 465     SER B    -1                                                      
REMARK 465     GLU B   630                                                      
REMARK 465     GLU B   631                                                      
REMARK 465     THR B   632                                                      
REMARK 465     GLN B   633                                                      
REMARK 465     ASP B   634                                                      
REMARK 465     GLN B   677                                                      
REMARK 465     GLU B   678                                                      
REMARK 465     ASP B   679                                                      
REMARK 465     SER B   680                                                      
REMARK 465     SER B   681                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ARG A 567    CD   NE   CZ   NH1  NH2                             
REMARK 470     LYS A 573    NZ                                                  
REMARK 470     LYS A 575    CD   CE   NZ                                        
REMARK 470     LYS A 592    CE   NZ                                             
REMARK 470     ARG A 613    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     HIS A 616    CG   ND1  CD2  CE1  NE2                             
REMARK 470     GLU A 625    CD   OE1  OE2                                       
REMARK 470     GLU A 630    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 631    CG   CD   OE1  OE2                                  
REMARK 470     THR A 632    OG1  CG2                                            
REMARK 470     GLN A 633    CG   CD   OE1  NE2                                  
REMARK 470     LYS A 637    CG   CD   CE   NZ                                   
REMARK 470     LEU A 662    CD1  CD2                                            
REMARK 470     GLU A 664    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 665    OE1  OE2                                            
REMARK 470     ARG B 567    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG B 572    NE   CZ   NH1  NH2                                  
REMARK 470     LYS B 573    CG   CD   CE   NZ                                   
REMARK 470     LYS B 575    CG   CD   CE   NZ                                   
REMARK 470     ARG B 589    NE   CZ   NH1  NH2                                  
REMARK 470     ARG B 599    NE   CZ   NH1  NH2                                  
REMARK 470     GLU B 625    CG   CD   OE1  OE2                                  
REMARK 470     GLN B 628    CG   CD   OE1  NE2                                  
REMARK 470     ASN B 629    CG   OD1  ND2                                       
REMARK 470     GLU B 636    CG   CD   OE1  OE2                                  
REMARK 470     LYS B 637    CG   CD   CE   NZ                                   
REMARK 470     ILE B 644    CG1  CG2  CD1                                       
REMARK 470     GLN B 655    CG   CD   OE1  NE2                                  
REMARK 470     GLU B 659    CG   CD   OE1  OE2                                  
REMARK 470     LEU B 662    CD1  CD2                                            
REMARK 470     GLU B 664    CG   CD   OE1  OE2                                  
REMARK 470     GLU B 665    CG   CD   OE1  OE2                                  
REMARK 470     LYS B 674    CE   NZ                                             
REMARK 470     TYR B 676    CG   CD1  CD2  CE1  CE2  CZ   OH                    
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ILE A 644      -60.16   -102.50                                   
REMARK 500    ILE B 644      -60.39   -101.96                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1679  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 571   SG                                                     
REMARK 620 2 CYS A 574   SG  107.8                                              
REMARK 620 3 CYS A 577   SG  114.0 102.9                                        
REMARK 620 4 CYS A 609   SG  101.5 121.9 109.2                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1678  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 582   SG                                                     
REMARK 620 2 CYS A 585   SG  104.5                                              
REMARK 620 3 CYS A 588   SG  117.7 107.2                                        
REMARK 620 4 CYS A 604   SG  105.2 115.6 107.1                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1681  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 620   SG                                                     
REMARK 620 2 CYS A 623   SG  106.8                                              
REMARK 620 3 HIS A 650   ND1 107.1  96.1                                        
REMARK 620 4 CYS A 653   SG  121.7 110.9 111.1                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1680  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 642   SG                                                     
REMARK 620 2 CYS A 645   SG  101.7                                              
REMARK 620 3 CYS A 672   SG  112.5 116.0                                        
REMARK 620 4 CYS A 675   SG  109.2 103.9 112.7                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN B1678  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS B 571   SG                                                     
REMARK 620 2 CYS B 574   SG  104.9                                              
REMARK 620 3 CYS B 577   SG  116.5 102.7                                        
REMARK 620 4 CYS B 609   SG  103.4 117.3 112.3                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN B1677  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS B 582   SG                                                     
REMARK 620 2 CYS B 585   SG  107.7                                              
REMARK 620 3 CYS B 588   SG  117.9 106.5                                        
REMARK 620 4 CYS B 604   SG  105.3 115.2 104.7                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN B1680  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS B 620   SG                                                     
REMARK 620 2 CYS B 623   SG  111.5                                              
REMARK 620 3 HIS B 650   ND1 107.2  94.3                                        
REMARK 620 4 CYS B 653   SG  126.3 109.6 102.6                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN B1679  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS B 642   SG                                                     
REMARK 620 2 CYS B 645   SG  105.4                                              
REMARK 620 3 CYS B 672   SG  111.8 112.5                                        
REMARK 620 4 CYS B 675   SG  114.0 104.5 108.6                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1677                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1677                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1678                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1679                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1678                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1680                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1681                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1679                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1680                 
DBREF  4BBQ A  567   681  UNP    Q9Y2K7   KDM2A_HUMAN    567    681             
DBREF  4BBQ B  567   681  UNP    Q9Y2K7   KDM2A_HUMAN    567    681             
SEQADV 4BBQ SER A   -1  UNP  Q9Y2K7              EXPRESSION TAG                 
SEQADV 4BBQ MET A    0  UNP  Q9Y2K7              EXPRESSION TAG                 
SEQADV 4BBQ SER B   -1  UNP  Q9Y2K7              EXPRESSION TAG                 
SEQADV 4BBQ MET B    0  UNP  Q9Y2K7              EXPRESSION TAG                 
SEQRES   1 A  117  SER MET ARG ARG VAL ARG CYS ARG LYS CYS LYS ALA CYS          
SEQRES   2 A  117  VAL GLN GLY GLU CYS GLY VAL CYS HIS TYR CYS ARG ASP          
SEQRES   3 A  117  MET LYS LYS PHE GLY GLY PRO GLY ARG MET LYS GLN SER          
SEQRES   4 A  117  CYS VAL LEU ARG GLN CYS LEU ALA PRO ARG LEU PRO HIS          
SEQRES   5 A  117  SER VAL THR CYS SER LEU CYS GLY GLU VAL ASP GLN ASN          
SEQRES   6 A  117  GLU GLU THR GLN ASP PHE GLU LYS LYS LEU MET GLU CYS          
SEQRES   7 A  117  CYS ILE CYS ASN GLU ILE VAL HIS PRO GLY CYS LEU GLN          
SEQRES   8 A  117  MET ASP GLY GLU GLY LEU LEU ASN GLU GLU LEU PRO ASN          
SEQRES   9 A  117  CYS TRP GLU CYS PRO LYS CYS TYR GLN GLU ASP SER SER          
SEQRES   1 B  117  SER MET ARG ARG VAL ARG CYS ARG LYS CYS LYS ALA CYS          
SEQRES   2 B  117  VAL GLN GLY GLU CYS GLY VAL CYS HIS TYR CYS ARG ASP          
SEQRES   3 B  117  MET LYS LYS PHE GLY GLY PRO GLY ARG MET LYS GLN SER          
SEQRES   4 B  117  CYS VAL LEU ARG GLN CYS LEU ALA PRO ARG LEU PRO HIS          
SEQRES   5 B  117  SER VAL THR CYS SER LEU CYS GLY GLU VAL ASP GLN ASN          
SEQRES   6 B  117  GLU GLU THR GLN ASP PHE GLU LYS LYS LEU MET GLU CYS          
SEQRES   7 B  117  CYS ILE CYS ASN GLU ILE VAL HIS PRO GLY CYS LEU GLN          
SEQRES   8 B  117  MET ASP GLY GLU GLY LEU LEU ASN GLU GLU LEU PRO ASN          
SEQRES   9 B  117  CYS TRP GLU CYS PRO LYS CYS TYR GLN GLU ASP SER SER          
HET    EDO  A1677       4                                                       
HET     ZN  A1678       1                                                       
HET     ZN  A1679       1                                                       
HET     ZN  A1680       1                                                       
HET     ZN  A1681       1                                                       
HET     ZN  B1677       1                                                       
HET     ZN  B1678       1                                                       
HET     ZN  B1679       1                                                       
HET     ZN  B1680       1                                                       
HETNAM     EDO 1,2-ETHANEDIOL                                                   
HETNAM      ZN ZINC ION                                                         
HETSYN     EDO ETHYLENE GLYCOL                                                  
FORMUL   3  EDO    C2 H6 O2                                                     
FORMUL   4   ZN    8(ZN 2+)                                                     
FORMUL  12  HOH   *106(H2 O)                                                    
HELIX    1   1 CYS A  574  GLN A  579  1                                   6    
HELIX    2   2 CYS A  585  MET A  591  1                                   7    
HELIX    3   3 LYS A  592  GLY A  595  5                                   4    
HELIX    4   4 CYS A  604  GLN A  608  5                                   5    
HELIX    5   5 GLN A  628  GLN A  633  1                                   6    
HELIX    6   6 ASP A  634  LYS A  638  5                                   5    
HELIX    7   7 HIS A  650  LEU A  654  5                                   5    
HELIX    8   8 CYS B  574  GLN B  579  1                                   6    
HELIX    9   9 CYS B  585  MET B  591  1                                   7    
HELIX   10  10 LYS B  592  GLY B  595  5                                   4    
HELIX   11  11 CYS B  604  GLN B  608  5                                   5    
HELIX   12  12 HIS B  650  LEU B  654  5                                   5    
SHEET    1  AA 4 ILE A 648  VAL A 649  0                                        
SHEET    2  AA 4 MET A 640  CYS A 642 -1  O  MET A 640   N  VAL A 649           
SHEET    3  AA 4 CYS A 669  GLU A 671  1  N  TRP A 670   O  GLU A 641           
SHEET    4  AA 4 LEU A 661  LEU A 662 -1  O  LEU A 661   N  GLU A 671           
SHEET    1  BA 4 ILE B 648  VAL B 649  0                                        
SHEET    2  BA 4 MET B 640  CYS B 642 -1  O  MET B 640   N  VAL B 649           
SHEET    3  BA 4 CYS B 669  GLU B 671  1  N  TRP B 670   O  GLU B 641           
SHEET    4  BA 4 LEU B 661  LEU B 662 -1  O  LEU B 661   N  GLU B 671           
LINK         SG  CYS A 571                ZN    ZN A1679     1555   1555  2.52  
LINK         SG  CYS A 574                ZN    ZN A1679     1555   1555  2.23  
LINK         SG  CYS A 577                ZN    ZN A1679     1555   1555  2.35  
LINK         SG  CYS A 582                ZN    ZN A1678     1555   1555  2.39  
LINK         SG  CYS A 585                ZN    ZN A1678     1555   1555  2.51  
LINK         SG  CYS A 588                ZN    ZN A1678     1555   1555  2.29  
LINK         SG  CYS A 604                ZN    ZN A1678     1555   1555  2.28  
LINK         SG  CYS A 609                ZN    ZN A1679     1555   1555  2.22  
LINK         SG  CYS A 620                ZN    ZN A1681     1555   1555  2.31  
LINK         SG  CYS A 623                ZN    ZN A1681     1555   1555  2.43  
LINK         SG  CYS A 642                ZN    ZN A1680     1555   1555  2.26  
LINK         SG  CYS A 645                ZN    ZN A1680     1555   1555  2.42  
LINK         ND1 HIS A 650                ZN    ZN A1681     1555   1555  2.17  
LINK         SG  CYS A 653                ZN    ZN A1681     1555   1555  2.30  
LINK         SG  CYS A 672                ZN    ZN A1680     1555   1555  2.37  
LINK         SG  CYS A 675                ZN    ZN A1680     1555   1555  2.30  
LINK         SG  CYS B 571                ZN    ZN B1678     1555   1555  2.47  
LINK         SG  CYS B 574                ZN    ZN B1678     1555   1555  2.33  
LINK         SG  CYS B 577                ZN    ZN B1678     1555   1555  2.30  
LINK         SG  CYS B 582                ZN    ZN B1677     1555   1555  2.31  
LINK         SG  CYS B 585                ZN    ZN B1677     1555   1555  2.46  
LINK         SG  CYS B 588                ZN    ZN B1677     1555   1555  2.33  
LINK         SG  CYS B 604                ZN    ZN B1677     1555   1555  2.30  
LINK         SG  CYS B 609                ZN    ZN B1678     1555   1555  2.16  
LINK         SG  CYS B 620                ZN    ZN B1680     1555   1555  2.24  
LINK         SG  CYS B 623                ZN    ZN B1680     1555   1555  2.42  
LINK         SG  CYS B 642                ZN    ZN B1679     1555   1555  2.17  
LINK         SG  CYS B 645                ZN    ZN B1679     1555   1555  2.41  
LINK         ND1 HIS B 650                ZN    ZN B1680     1555   1555  2.27  
LINK         SG  CYS B 653                ZN    ZN B1680     1555   1555  2.26  
LINK         SG  CYS B 672                ZN    ZN B1679     1555   1555  2.53  
LINK         SG  CYS B 675                ZN    ZN B1679     1555   1555  2.23  
SITE     1 AC1  7 ASP A 657  GLY A 658  HOH A2049  LYS B 601                    
SITE     2 AC1  7 GLN B 602  HOH B2006  HOH B2029                               
SITE     1 AC2  4 CYS B 582  CYS B 585  CYS B 588  CYS B 604                    
SITE     1 AC3  4 CYS A 582  CYS A 585  CYS A 588  CYS A 604                    
SITE     1 AC4  4 CYS A 571  CYS A 574  CYS A 577  CYS A 609                    
SITE     1 AC5  4 CYS B 571  CYS B 574  CYS B 577  CYS B 609                    
SITE     1 AC6  4 CYS A 642  CYS A 645  CYS A 672  CYS A 675                    
SITE     1 AC7  4 CYS A 620  CYS A 623  HIS A 650  CYS A 653                    
SITE     1 AC8  4 CYS B 642  CYS B 645  CYS B 672  CYS B 675                    
SITE     1 AC9  4 CYS B 620  CYS B 623  HIS B 650  CYS B 653                    
CRYST1   49.024   30.053   90.824  90.00  91.66  90.00 P 1 21 1      4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.020398  0.000000  0.000591        0.00000                         
SCALE2      0.000000  0.033275  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011015        0.00000