HEADER ALLERGEN 03-OCT-12 4BCT TITLE CRYSTAL STRUCTURE OF KIWI-FRUIT ALLERGEN ACT D 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: THAUMATIN-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 25-225; COMPND 5 SYNONYM: ACT D 2, ALLERGEN ACT D 2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINIDIA DELICIOSA; SOURCE 3 ORGANISM_COMMON: KIWIFRUIT; SOURCE 4 ORGANISM_TAXID: 3627 KEYWDS ALLERGEN, TLP EXPDTA X-RAY DIFFRACTION AUTHOR T.PAVKOV-KELLER,M.BUBLIN,M.JANKOVIC,H.BREITENEDER,W.KELLER REVDAT 1 16-OCT-13 4BCT 0 JRNL AUTH T.PAVKOV-KELLER,M.BUBLIN,M.JANKOVIC,H.BREITENEDER,W.KELLER JRNL TITL CRYSTAL STRUCTURE OF KIWI-FRUIT ALLERGEN ACT D 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 0.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 99.85 REMARK 3 NUMBER OF REFLECTIONS : 91955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.11406 REMARK 3 R VALUE (WORKING SET) : 0.11315 REMARK 3 FREE R VALUE : 0.13125 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 4842 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 0.980 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.006 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6673 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.222 REMARK 3 BIN FREE R VALUE SET COUNT : 339 REMARK 3 BIN FREE R VALUE : 0.250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1618 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 339 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.476 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04 REMARK 3 B22 (A**2) : 0.00 REMARK 3 B33 (A**2) : 0.03 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : -0.03 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.018 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.019 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.010 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.398 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.976 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1710 ; 0.025 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2351 ; 2.394 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 228 ; 6.805 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;40.870 ;24.762 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 247 ; 9.827 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;17.346 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 233 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1396 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1064 ; 1.973 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1727 ; 2.949 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 646 ; 4.628 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 619 ; 6.546 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1710 ; 2.276 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. U VALUES - REFINED INDIVIDUALLY REMARK 4 REMARK 4 4BCT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-12. REMARK 100 THE PDBE ID CODE IS EBI-54031. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97776 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.98 REMARK 200 RESOLUTION RANGE LOW (A) : 50.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.5 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4 REMARK 200 R MERGE (I) : 0.04 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.70 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22-30% PEG 6000, PH 6.8-7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.77050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.15600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.77050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.15600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD LYS A 83 O HOH A 2129 2.13 REMARK 500 NE2B GLN A 94 O HOH A 2156 2.03 REMARK 500 OE1B GLN A 96 O HOH A 2158 2.17 REMARK 500 OD1B ASP A 125 O HOH A 2087 2.04 REMARK 500 O HOH A 2087 O HOH A 2185 2.11 REMARK 500 O HOH A 2109 O HOH A 2110 2.03 REMARK 500 O HOH A 2184 O HOH A 2252 2.17 REMARK 500 O HOH A 2191 O HOH A 2328 1.83 REMARK 500 O HOH A 2268 O HOH A 2270 2.08 REMARK 500 O HOH A 2271 O HOH A 2272 1.94 REMARK 500 O HOH A 2327 O HOH A 2329 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN A 75 OD1 ASN A 75 2555 2.18 REMARK 500 NH1B ARG A 81 O HOH A 2202 3455 2.18 REMARK 500 OE1B GLN A 96 O HOH A 2261 4556 1.72 REMARK 500 OE1B GLN A 112 OE1B GLN A 112 2656 2.13 REMARK 500 O HOH A 2077 O HOH A 2269 2656 1.66 REMARK 500 O HOH A 2100 O HOH A 2100 2555 1.09 REMARK 500 O HOH A 2105 O HOH A 2105 2555 1.79 REMARK 500 O HOH A 2185 O HOH A 2289 4556 1.84 REMARK 500 O HOH A 2230 O HOH A 2272 4546 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 67 CD ARG A 67 NE -0.144 REMARK 500 VAL A 129 CA VAL A 129 CB 0.134 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 33 CB - CA - C ANGL. DEV. = -7.2 DEGREES REMARK 500 ARG A 51 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 PHE A 118 CB - CG - CD1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ASP A 120 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 120 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 125 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 CYS A 183 CA - CB - SG ANGL. DEV. = -7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 34 37.07 -84.86 REMARK 500 CYS A 183 168.88 172.57 REMARK 500 ASP A 205 36.91 -82.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A1226 DBREF 4BCT A 25 225 UNP P81370 TLP_ACTDE 25 225 SEQRES 1 A 201 ALA THR PHE ASN ILE ILE ASN ASN CYS PRO PHE THR VAL SEQRES 2 A 201 TRP ALA ALA ALA VAL PRO GLY GLY GLY LYS ARG LEU ASP SEQRES 3 A 201 ARG GLY GLN ASN TRP ILE ILE ASN PRO GLY ALA GLY THR SEQRES 4 A 201 LYS GLY ALA ARG VAL TRP PRO ARG THR GLY CYS ASN PHE SEQRES 5 A 201 ASP GLY ALA GLY ARG GLY LYS CYS GLN THR GLY ASP CYS SEQRES 6 A 201 ASN GLY LEU LEU GLN CYS GLN ALA PHE GLY GLN PRO PRO SEQRES 7 A 201 ASN THR LEU ALA GLU TYR ALA LEU ASN GLN PHE ASN ASN SEQRES 8 A 201 LEU ASP PHE PHE ASP ILE SER LEU VAL ASP GLY PHE ASN SEQRES 9 A 201 VAL ALA MET GLU PHE SER PRO THR SER GLY GLY CYS THR SEQRES 10 A 201 ARG GLY ILE LYS CYS THR ALA ASP ILE ASN GLY GLN CYS SEQRES 11 A 201 PRO ASN GLU LEU ARG ALA PRO GLY GLY CYS ASN ASN PRO SEQRES 12 A 201 CYS THR VAL PHE LYS THR ASP GLN TYR CYS CYS ASN SER SEQRES 13 A 201 GLY ASN CYS GLY LEU THR ASN PHE SER LYS PHE PHE LYS SEQRES 14 A 201 ASP ARG CYS PRO ASP ALA TYR SER TYR PRO LYS ASP ASP SEQRES 15 A 201 GLN THR SER THR PHE THR CYS PRO ALA GLY THR ASN TYR SEQRES 16 A 201 LYS VAL VAL PHE CYS PRO HET EPE A1226 30 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE HETNAM 2 EPE ETHANESULFONIC ACID HETSYN EPE HEPES FORMUL 2 EPE C8 H18 N2 O4 S FORMUL 3 HOH *339(H2 O) HELIX 1 1 ASP A 149 CYS A 154 1 6 HELIX 2 2 PRO A 155 GLU A 157 5 3 HELIX 3 3 ASN A 166 LYS A 172 1 7 HELIX 4 4 THR A 173 CYS A 178 1 6 HELIX 5 5 THR A 186 CYS A 196 1 11 HELIX 6 6 ASP A 205 SER A 209 5 5 SHEET 1 AA 5 ASN A 54 ILE A 57 0 SHEET 2 AA 5 PHE A 27 ASN A 31 -1 O PHE A 27 N ILE A 57 SHEET 3 AA 5 TYR A 219 PHE A 223 1 O TYR A 219 N ASN A 28 SHEET 4 AA 5 MET A 131 PRO A 135 -1 O GLU A 132 N VAL A 222 SHEET 5 AA 5 ILE A 144 CYS A 146 -1 O ILE A 144 N PHE A 133 SHEET 1 AB 4 GLY A 45 LEU A 49 0 SHEET 2 AB 4 VAL A 37 VAL A 42 -1 O VAL A 37 N LEU A 49 SHEET 3 AB 4 ALA A 66 PHE A 76 -1 O ARG A 67 N VAL A 42 SHEET 4 AB 4 GLY A 82 THR A 86 -1 O LYS A 83 N ASN A 75 SHEET 1 AC 6 GLY A 45 LEU A 49 0 SHEET 2 AC 6 VAL A 37 VAL A 42 -1 O VAL A 37 N LEU A 49 SHEET 3 AC 6 ALA A 66 PHE A 76 -1 O ARG A 67 N VAL A 42 SHEET 4 AC 6 LEU A 105 PHE A 113 -1 O ALA A 106 N VAL A 68 SHEET 5 AC 6 LEU A 116 SER A 122 -1 O LEU A 116 N GLN A 112 SHEET 6 AC 6 PHE A 211 PRO A 214 -1 O PHE A 211 N PHE A 119 SHEET 1 AD 2 GLY A 82 THR A 86 0 SHEET 2 AD 2 ALA A 66 PHE A 76 -1 O THR A 72 N THR A 86 SHEET 1 AE 2 ARG A 159 ALA A 160 0 SHEET 2 AE 2 GLY A 163 CYS A 164 -1 O GLY A 163 N ALA A 160 SSBOND 1 CYS A 33 CYS A 224 1555 1555 2.02 SSBOND 2 CYS A 74 CYS A 84 1555 1555 2.07 SSBOND 3 CYS A 89 CYS A 95 1555 1555 2.02 SSBOND 4 CYS A 140 CYS A 213 1555 1555 2.03 SSBOND 5 CYS A 146 CYS A 196 1555 1555 2.02 SSBOND 6 CYS A 154 CYS A 164 1555 1555 2.03 SSBOND 7 CYS A 168 CYS A 177 1555 1555 2.04 SSBOND 8 CYS A 178 CYS A 183 1555 1555 2.01 CISPEP 1 VAL A 42 PRO A 43 0 1.86 CISPEP 2 PRO A 101 PRO A 102 0 3.75 SITE 1 AC1 11 GLU A 107 PHE A 113 ASN A 114 ASP A 120 SITE 2 AC1 11 SER A 122 VAL A 124 TYR A 200 HOH A2169 SITE 3 AC1 11 HOH A2335 HOH A2336 HOH A2338 CRYST1 71.541 48.312 50.580 90.00 100.72 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013978 0.000000 0.002646 0.00000 SCALE2 0.000000 0.020699 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020122 0.00000