data_4BD3
# 
_entry.id   4BD3 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.371 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   4BD3         pdb_00004bd3 10.2210/pdb4bd3/pdb 
PDBE  EBI-54272    ?            ?                   
WWPDB D_1290054272 ?            ?                   
BMRB  18764        ?            ?                   
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.content_type 
_pdbx_database_related.details 
PDB  2B2T  unspecified 
'TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONEH3 TAIL CONTAINING TRIMETHYLLYSINE 4 AND PHOSPHOTHREONINE 3' 
PDB  2B2U  unspecified 
'TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONEH3 TAIL CONTAINING TRIMETHYLLYSINE 4 AND DIMETHYLARGININE 2' 
PDB  2B2V  unspecified 'CRYSTAL STRUCTURE ANALYSIS OF HUMAN CHD1 CHROMODOMAINS 1AND 2 BOUND TO HISTONE H3 RESI 1-15 MEK4' 
PDB  2B2W  unspecified 'TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONEH3 TAIL CONTAINING TRIMETHYLLYSINE 4' 
PDB  2C1J  unspecified 'MOLECULAR BASIS FOR THE RECOGNITION OF PHOSPHORYLATED AND PHOSPHOACETYLATED HISTONE H3 BY 14-3-3' 
PDB  2C1N  unspecified 'MOLECULAR BASIS FOR THE RECOGNITION OF PHOSPHORYLATED AND PHOSPHOACETYLATED HISTONE H3 BY 14-3-3' 
PDB  2CV5  unspecified 'CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE' 
PDB  2UXN  unspecified 'STRUCTURAL BASIS OF HISTONE DEMETHYLATION BY LSD1 REVEALED BY SUICIDE INACTIVATION' 
PDB  3ZVY  unspecified 'PHD FINGER OF HUMAN UHRF1 IN COMPLEX WITH UNMODIFIED HISTONE H3 N-TERMINAL TAIL' 
PDB  4A0J  unspecified 'CRYSTAL STRUCTURE OF SURVIVIN BOUND TO THE PHOSPHORYLATED N-TERMINAL TAIL OF HISTONE H3' 
PDB  4A0N  unspecified 'CRYSTAL STRUCTURE OF SURVIVIN BOUND TO THE PHOSPHORYLATED N-TERMINAL TAIL OF HISTONE H3' 
PDB  4A7J  unspecified 'SYMMETRIC DIMETHYLATION OF H3 ARGININE 2 IS A NOVEL HISTONE MARK THAT SUPPORTS EUCHROMATIN MAINTENANCE' 
BMRB 18764 unspecified . 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        4BD3 
_pdbx_database_status.deposit_site                    PDBE 
_pdbx_database_status.process_site                    PDBE 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.recvd_initial_deposition_date   2012-10-04 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  REL 
_pdbx_database_status.status_code_cs                  REL 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_nmr_data            REL 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Lapinaite, A.'  1 
'Simon, B.'      2 
'Carlomagno, T.' 3 
# 
_citation.id                        primary 
_citation.title                     'Phf19 Links Methylated Lys36 of Histone H3 to Regulation of Polycomb Activity' 
_citation.journal_abbrev            Nat.Struct.Mol.Biol. 
_citation.journal_volume            19 
_citation.page_first                1257 
_citation.page_last                 ? 
_citation.year                      2012 
_citation.journal_id_ASTM           ? 
_citation.country                   US 
_citation.journal_id_ISSN           1545-9993 
_citation.journal_id_CSD            ? 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   23104054 
_citation.pdbx_database_id_DOI      10.1038/NSMB.2434 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Ballare, C.'    1  ? 
primary 'Lange, M.'      2  ? 
primary 'Lapinaite, A.'  3  ? 
primary 'Mas Martin, G.' 4  ? 
primary 'Morey, L.'      5  ? 
primary 'Pascu, G.'      6  ? 
primary 'Liefke, R.'     7  ? 
primary 'Simon, B.'      8  ? 
primary 'Shi, Y.'        9  ? 
primary 'Gozani, O.'     10 ? 
primary 'Carlomagno, T.' 11 ? 
primary 'Benitah, S.A.'  12 ? 
primary 'Di Croce, L.'   13 ? 
# 
_cell.entry_id           4BD3 
_cell.length_a           1.000 
_cell.length_b           1.000 
_cell.length_c           1.000 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              2 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         4BD3 
_symmetry.space_group_name_H-M             'P 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                1 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer man 'PHD FINGER PROTEIN 19' 6721.652 1 ? ? 'TUDOR DOMAIN, RESIDUES 38-95'    ? 
2 polymer syn 'HISTONE H3'            1259.500 1 ? ? 'H3(31-41)K36ME3, RESIDUES 32-42' ? 
# 
_entity_name_com.entity_id   1 
_entity_name_com.name        'POLYCOMB-LIKE PROTEIN 3, HPCL3' 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 'polypeptide(L)' no no  SKLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGE 
SKLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGE A ? 
2 'polypeptide(L)' no yes 'ATGGV(M3L)KPHRY'                                          ATGGVKKPHRY B ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  SER n 
1 2  LYS n 
1 3  LEU n 
1 4  THR n 
1 5  GLU n 
1 6  GLY n 
1 7  GLN n 
1 8  TYR n 
1 9  VAL n 
1 10 LEU n 
1 11 CYS n 
1 12 ARG n 
1 13 TRP n 
1 14 THR n 
1 15 ASP n 
1 16 GLY n 
1 17 LEU n 
1 18 TYR n 
1 19 TYR n 
1 20 LEU n 
1 21 GLY n 
1 22 LYS n 
1 23 ILE n 
1 24 LYS n 
1 25 ARG n 
1 26 VAL n 
1 27 SER n 
1 28 SER n 
1 29 SER n 
1 30 LYS n 
1 31 GLN n 
1 32 SER n 
1 33 CYS n 
1 34 LEU n 
1 35 VAL n 
1 36 THR n 
1 37 PHE n 
1 38 GLU n 
1 39 ASP n 
1 40 ASN n 
1 41 SER n 
1 42 LYS n 
1 43 TYR n 
1 44 TRP n 
1 45 VAL n 
1 46 LEU n 
1 47 TRP n 
1 48 LYS n 
1 49 ASP n 
1 50 ILE n 
1 51 GLN n 
1 52 HIS n 
1 53 ALA n 
1 54 GLY n 
1 55 VAL n 
1 56 PRO n 
1 57 GLY n 
1 58 GLU n 
2 1  ALA n 
2 2  THR n 
2 3  GLY n 
2 4  GLY n 
2 5  VAL n 
2 6  M3L n 
2 7  LYS n 
2 8  PRO n 
2 9  HIS n 
2 10 ARG n 
2 11 TYR n 
# 
_entity_src_gen.entity_id                          1 
_entity_src_gen.pdbx_src_id                        1 
_entity_src_gen.pdbx_alt_source_flag               sample 
_entity_src_gen.pdbx_seq_type                      ? 
_entity_src_gen.pdbx_beg_seq_num                   ? 
_entity_src_gen.pdbx_end_seq_num                   ? 
_entity_src_gen.gene_src_common_name               HUMAN 
_entity_src_gen.gene_src_genus                     ? 
_entity_src_gen.pdbx_gene_src_gene                 ? 
_entity_src_gen.gene_src_species                   ? 
_entity_src_gen.gene_src_strain                    ? 
_entity_src_gen.gene_src_tissue                    ? 
_entity_src_gen.gene_src_tissue_fraction           ? 
_entity_src_gen.gene_src_details                   ? 
_entity_src_gen.pdbx_gene_src_fragment             ? 
_entity_src_gen.pdbx_gene_src_scientific_name      'HOMO SAPIENS' 
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id     9606 
_entity_src_gen.pdbx_gene_src_variant              ? 
_entity_src_gen.pdbx_gene_src_cell_line            ? 
_entity_src_gen.pdbx_gene_src_atcc                 ? 
_entity_src_gen.pdbx_gene_src_organ                ? 
_entity_src_gen.pdbx_gene_src_organelle            ? 
_entity_src_gen.pdbx_gene_src_cell                 ? 
_entity_src_gen.pdbx_gene_src_cellular_location    ? 
_entity_src_gen.host_org_common_name               ? 
_entity_src_gen.pdbx_host_org_scientific_name      'ESCHERICHIA COLI BL21' 
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id     511693 
_entity_src_gen.host_org_genus                     ? 
_entity_src_gen.pdbx_host_org_gene                 ? 
_entity_src_gen.pdbx_host_org_organ                ? 
_entity_src_gen.host_org_species                   ? 
_entity_src_gen.pdbx_host_org_tissue               ? 
_entity_src_gen.pdbx_host_org_tissue_fraction      ? 
_entity_src_gen.pdbx_host_org_strain               ? 
_entity_src_gen.pdbx_host_org_variant              'ROSETTA 2' 
_entity_src_gen.pdbx_host_org_cell_line            ? 
_entity_src_gen.pdbx_host_org_atcc                 ? 
_entity_src_gen.pdbx_host_org_culture_collection   ? 
_entity_src_gen.pdbx_host_org_cell                 ? 
_entity_src_gen.pdbx_host_org_organelle            ? 
_entity_src_gen.pdbx_host_org_cellular_location    ? 
_entity_src_gen.pdbx_host_org_vector_type          PLASMID 
_entity_src_gen.pdbx_host_org_vector               PET-MCN 
_entity_src_gen.host_org_details                   ? 
_entity_src_gen.expression_system_id               ? 
_entity_src_gen.plasmid_name                       ? 
_entity_src_gen.plasmid_details                    ? 
_entity_src_gen.pdbx_description                   ? 
# 
_pdbx_entity_src_syn.entity_id              2 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    'HOMO SAPIENS' 
_pdbx_entity_src_syn.organism_common_name   HUMAN 
_pdbx_entity_src_syn.ncbi_taxonomy_id       9606 
_pdbx_entity_src_syn.details                ? 
# 
loop_
_struct_ref.id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.entity_id 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
_struct_ref.pdbx_db_accession 
_struct_ref.pdbx_db_isoform 
1 UNP PHF19_HUMAN 1 ? ? Q5T6S3 ? 
2 UNP H31_HUMAN   2 ? ? P68431 ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 4BD3 A 1 ? 58 ? Q5T6S3 38 ? 95 ? 38 95 
2 2 4BD3 B 1 ? 11 ? P68431 32 ? 42 ? 31 41 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
ALA 'L-peptide linking' y ALANINE           ? 'C3 H7 N O2'     89.093  
ARG 'L-peptide linking' y ARGININE          ? 'C6 H15 N4 O2 1' 175.209 
ASN 'L-peptide linking' y ASPARAGINE        ? 'C4 H8 N2 O3'    132.118 
ASP 'L-peptide linking' y 'ASPARTIC ACID'   ? 'C4 H7 N O4'     133.103 
CYS 'L-peptide linking' y CYSTEINE          ? 'C3 H7 N O2 S'   121.158 
GLN 'L-peptide linking' y GLUTAMINE         ? 'C5 H10 N2 O3'   146.144 
GLU 'L-peptide linking' y 'GLUTAMIC ACID'   ? 'C5 H9 N O4'     147.129 
GLY 'peptide linking'   y GLYCINE           ? 'C2 H5 N O2'     75.067  
HIS 'L-peptide linking' y HISTIDINE         ? 'C6 H10 N3 O2 1' 156.162 
ILE 'L-peptide linking' y ISOLEUCINE        ? 'C6 H13 N O2'    131.173 
LEU 'L-peptide linking' y LEUCINE           ? 'C6 H13 N O2'    131.173 
LYS 'L-peptide linking' y LYSINE            ? 'C6 H15 N2 O2 1' 147.195 
M3L 'L-peptide linking' n N-TRIMETHYLLYSINE ? 'C9 H21 N2 O2 1' 189.275 
PHE 'L-peptide linking' y PHENYLALANINE     ? 'C9 H11 N O2'    165.189 
PRO 'L-peptide linking' y PROLINE           ? 'C5 H9 N O2'     115.130 
SER 'L-peptide linking' y SERINE            ? 'C3 H7 N O3'     105.093 
THR 'L-peptide linking' y THREONINE         ? 'C4 H9 N O3'     119.119 
TRP 'L-peptide linking' y TRYPTOPHAN        ? 'C11 H12 N2 O2'  204.225 
TYR 'L-peptide linking' y TYROSINE          ? 'C9 H11 N O3'    181.189 
VAL 'L-peptide linking' y VALINE            ? 'C5 H11 N O2'    117.146 
# 
loop_
_pdbx_nmr_exptl.experiment_id 
_pdbx_nmr_exptl.conditions_id 
_pdbx_nmr_exptl.type 
_pdbx_nmr_exptl.solution_id 
1 1 'TRIPLE RESONANCE' 1 
2 1 NOESY              1 
3 1 'EDITED -FILTERED' 1 
# 
_pdbx_nmr_exptl_sample_conditions.conditions_id          1 
_pdbx_nmr_exptl_sample_conditions.temperature            298.0 
_pdbx_nmr_exptl_sample_conditions.pressure_units         atm 
_pdbx_nmr_exptl_sample_conditions.pressure               1.0 
_pdbx_nmr_exptl_sample_conditions.pH                     7.0 
_pdbx_nmr_exptl_sample_conditions.ionic_strength         200 
_pdbx_nmr_exptl_sample_conditions.ionic_strength_units   mM 
_pdbx_nmr_exptl_sample_conditions.pH_units               pH 
_pdbx_nmr_exptl_sample_conditions.temperature_units      K 
# 
_pdbx_nmr_sample_details.solution_id   1 
_pdbx_nmr_sample_details.contents      '90% WATER/10% D2O' 
# 
_pdbx_nmr_spectrometer.spectrometer_id   1 
_pdbx_nmr_spectrometer.model             AVANCE 
_pdbx_nmr_spectrometer.manufacturer      Bruker 
_pdbx_nmr_spectrometer.field_strength    600 
# 
_pdbx_nmr_refine.entry_id           4BD3 
_pdbx_nmr_refine.method             ARIA 
_pdbx_nmr_refine.details            ? 
_pdbx_nmr_refine.software_ordinal   1 
# 
_pdbx_nmr_details.entry_id   4BD3 
_pdbx_nmr_details.text       NONE 
# 
_pdbx_nmr_ensemble.entry_id                             4BD3 
_pdbx_nmr_ensemble.conformers_calculated_total_number   100 
_pdbx_nmr_ensemble.conformers_submitted_total_number    10 
_pdbx_nmr_ensemble.conformer_selection_criteria         'LEAST RESTRAINT VIOLATION' 
# 
_pdbx_nmr_representative.entry_id             4BD3 
_pdbx_nmr_representative.conformer_id         6 
_pdbx_nmr_representative.selection_criteria   ? 
# 
loop_
_pdbx_nmr_software.classification 
_pdbx_nmr_software.name 
_pdbx_nmr_software.version 
_pdbx_nmr_software.authors 
_pdbx_nmr_software.ordinal 
refinement           CNS     1.2 BRUNGER 1 
'structure solution' NMRView ?   ?       2 
# 
_exptl.entry_id          4BD3 
_exptl.method            'SOLUTION NMR' 
_exptl.crystals_number   ? 
# 
_struct.entry_id                  4BD3 
_struct.title                     'Phf19 links methylated lysine 36 of histone H3 to regulation of Polycomb activity' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        4BD3 
_struct_keywords.pdbx_keywords   TRANSCRIPTION 
_struct_keywords.text            'PHF-19, HISTONE RECOGNITION, H3K36ME3, TRANSCRIPTION' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
# 
_struct_biol.id   1 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1 covale both ? B VAL 5 C ? ? ? 1_555 B M3L 6 N ? ? B VAL 35 B M3L 36 1_555 ? ? ? ? ? ? ? 1.323 ? ? 
covale2 covale both ? B M3L 6 C ? ? ? 1_555 B LYS 7 N ? ? B M3L 36 B LYS 37 1_555 ? ? ? ? ? ? ? 1.325 ? ? 
# 
_struct_conn_type.id          covale 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_struct_sheet.id 
_struct_sheet.type 
_struct_sheet.number_strands 
_struct_sheet.details 
AA ? 4 ? 
AB ? 5 ? 
BA ? 2 ? 
# 
loop_
_struct_sheet_order.sheet_id 
_struct_sheet_order.range_id_1 
_struct_sheet_order.range_id_2 
_struct_sheet_order.offset 
_struct_sheet_order.sense 
AA 1 2 ? anti-parallel 
AA 2 3 ? anti-parallel 
AA 3 4 ? parallel      
AB 1 2 ? anti-parallel 
AB 2 3 ? anti-parallel 
AB 3 4 ? anti-parallel 
AB 4 5 ? anti-parallel 
BA 1 2 ? parallel      
# 
loop_
_struct_sheet_range.sheet_id 
_struct_sheet_range.id 
_struct_sheet_range.beg_label_comp_id 
_struct_sheet_range.beg_label_asym_id 
_struct_sheet_range.beg_label_seq_id 
_struct_sheet_range.pdbx_beg_PDB_ins_code 
_struct_sheet_range.end_label_comp_id 
_struct_sheet_range.end_label_asym_id 
_struct_sheet_range.end_label_seq_id 
_struct_sheet_range.pdbx_end_PDB_ins_code 
_struct_sheet_range.beg_auth_comp_id 
_struct_sheet_range.beg_auth_asym_id 
_struct_sheet_range.beg_auth_seq_id 
_struct_sheet_range.end_auth_comp_id 
_struct_sheet_range.end_auth_asym_id 
_struct_sheet_range.end_auth_seq_id 
AA 1 LYS A 42 ? LEU A 46 ? LYS A 79 LEU A 83 
AA 2 SER A 32 ? PHE A 37 ? SER A 69 PHE A 74 
AA 3 TYR A 18 ? SER A 27 ? TYR A 55 SER A 64 
AA 4 PRO B 8  ? HIS B 9  ? PRO B 38 HIS B 39 
AB 1 LYS A 42 ? LEU A 46 ? LYS A 79 LEU A 83 
AB 2 SER A 32 ? PHE A 37 ? SER A 69 PHE A 74 
AB 3 TYR A 18 ? SER A 27 ? TYR A 55 SER A 64 
AB 4 TYR A 8  ? ARG A 12 ? TYR A 45 ARG A 49 
AB 5 ILE A 50 ? HIS A 52 ? ILE A 87 HIS A 89 
BA 1 PRO B 8  ? HIS B 9  ? PRO B 38 HIS B 39 
BA 2 TYR A 18 ? SER A 27 ? TYR A 55 SER A 64 
# 
loop_
_pdbx_struct_sheet_hbond.sheet_id 
_pdbx_struct_sheet_hbond.range_id_1 
_pdbx_struct_sheet_hbond.range_id_2 
_pdbx_struct_sheet_hbond.range_1_label_atom_id 
_pdbx_struct_sheet_hbond.range_1_label_comp_id 
_pdbx_struct_sheet_hbond.range_1_label_asym_id 
_pdbx_struct_sheet_hbond.range_1_label_seq_id 
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_1_auth_atom_id 
_pdbx_struct_sheet_hbond.range_1_auth_comp_id 
_pdbx_struct_sheet_hbond.range_1_auth_asym_id 
_pdbx_struct_sheet_hbond.range_1_auth_seq_id 
_pdbx_struct_sheet_hbond.range_2_label_atom_id 
_pdbx_struct_sheet_hbond.range_2_label_comp_id 
_pdbx_struct_sheet_hbond.range_2_label_asym_id 
_pdbx_struct_sheet_hbond.range_2_label_seq_id 
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_2_auth_atom_id 
_pdbx_struct_sheet_hbond.range_2_auth_comp_id 
_pdbx_struct_sheet_hbond.range_2_auth_asym_id 
_pdbx_struct_sheet_hbond.range_2_auth_seq_id 
AA 1 2 N VAL A 45 ? N VAL A 82 O CYS A 33 ? O CYS A 70 
AA 2 3 N THR A 36 ? N THR A 73 O LYS A 22 ? O LYS A 59 
AA 3 4 N TYR A 18 ? N TYR A 55 O HIS B 9  ? O HIS B 39 
AB 1 2 N VAL A 45 ? N VAL A 82 O CYS A 33 ? O CYS A 70 
AB 2 3 N THR A 36 ? N THR A 73 O LYS A 22 ? O LYS A 59 
AB 3 4 N GLY A 21 ? N GLY A 58 O VAL A 9  ? O VAL A 46 
AB 4 5 N LEU A 10 ? N LEU A 47 O GLN A 51 ? O GLN A 88 
BA 1 2 N HIS B 9  ? N HIS B 39 O TYR A 18 ? O TYR A 55 
# 
_database_PDB_matrix.entry_id          4BD3 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_atom_sites.entry_id                    4BD3 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
H 
N 
O 
S 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  SER 1  38 38 SER SER A . n 
A 1 2  LYS 2  39 39 LYS LYS A . n 
A 1 3  LEU 3  40 40 LEU LEU A . n 
A 1 4  THR 4  41 41 THR THR A . n 
A 1 5  GLU 5  42 42 GLU GLU A . n 
A 1 6  GLY 6  43 43 GLY GLY A . n 
A 1 7  GLN 7  44 44 GLN GLN A . n 
A 1 8  TYR 8  45 45 TYR TYR A . n 
A 1 9  VAL 9  46 46 VAL VAL A . n 
A 1 10 LEU 10 47 47 LEU LEU A . n 
A 1 11 CYS 11 48 48 CYS CYS A . n 
A 1 12 ARG 12 49 49 ARG ARG A . n 
A 1 13 TRP 13 50 50 TRP TRP A . n 
A 1 14 THR 14 51 51 THR THR A . n 
A 1 15 ASP 15 52 52 ASP ASP A . n 
A 1 16 GLY 16 53 53 GLY GLY A . n 
A 1 17 LEU 17 54 54 LEU LEU A . n 
A 1 18 TYR 18 55 55 TYR TYR A . n 
A 1 19 TYR 19 56 56 TYR TYR A . n 
A 1 20 LEU 20 57 57 LEU LEU A . n 
A 1 21 GLY 21 58 58 GLY GLY A . n 
A 1 22 LYS 22 59 59 LYS LYS A . n 
A 1 23 ILE 23 60 60 ILE ILE A . n 
A 1 24 LYS 24 61 61 LYS LYS A . n 
A 1 25 ARG 25 62 62 ARG ARG A . n 
A 1 26 VAL 26 63 63 VAL VAL A . n 
A 1 27 SER 27 64 64 SER SER A . n 
A 1 28 SER 28 65 65 SER SER A . n 
A 1 29 SER 29 66 66 SER SER A . n 
A 1 30 LYS 30 67 67 LYS LYS A . n 
A 1 31 GLN 31 68 68 GLN GLN A . n 
A 1 32 SER 32 69 69 SER SER A . n 
A 1 33 CYS 33 70 70 CYS CYS A . n 
A 1 34 LEU 34 71 71 LEU LEU A . n 
A 1 35 VAL 35 72 72 VAL VAL A . n 
A 1 36 THR 36 73 73 THR THR A . n 
A 1 37 PHE 37 74 74 PHE PHE A . n 
A 1 38 GLU 38 75 75 GLU GLU A . n 
A 1 39 ASP 39 76 76 ASP ASP A . n 
A 1 40 ASN 40 77 77 ASN ASN A . n 
A 1 41 SER 41 78 78 SER SER A . n 
A 1 42 LYS 42 79 79 LYS LYS A . n 
A 1 43 TYR 43 80 80 TYR TYR A . n 
A 1 44 TRP 44 81 81 TRP TRP A . n 
A 1 45 VAL 45 82 82 VAL VAL A . n 
A 1 46 LEU 46 83 83 LEU LEU A . n 
A 1 47 TRP 47 84 84 TRP TRP A . n 
A 1 48 LYS 48 85 85 LYS LYS A . n 
A 1 49 ASP 49 86 86 ASP ASP A . n 
A 1 50 ILE 50 87 87 ILE ILE A . n 
A 1 51 GLN 51 88 88 GLN GLN A . n 
A 1 52 HIS 52 89 89 HIS HIS A . n 
A 1 53 ALA 53 90 90 ALA ALA A . n 
A 1 54 GLY 54 91 91 GLY GLY A . n 
A 1 55 VAL 55 92 92 VAL VAL A . n 
A 1 56 PRO 56 93 93 PRO PRO A . n 
A 1 57 GLY 57 94 94 GLY GLY A . n 
A 1 58 GLU 58 95 95 GLU GLU A . n 
B 2 1  ALA 1  31 31 ALA ALA B . n 
B 2 2  THR 2  32 32 THR THR B . n 
B 2 3  GLY 3  33 33 GLY GLY B . n 
B 2 4  GLY 4  34 34 GLY GLY B . n 
B 2 5  VAL 5  35 35 VAL VAL B . n 
B 2 6  M3L 6  36 36 M3L M3L B . n 
B 2 7  LYS 7  37 37 LYS LYS B . n 
B 2 8  PRO 8  38 38 PRO PRO B . n 
B 2 9  HIS 9  39 39 HIS HIS B . n 
B 2 10 ARG 10 40 40 ARG ARG B . n 
B 2 11 TYR 11 41 41 TYR TYR B . n 
# 
_pdbx_struct_mod_residue.id               1 
_pdbx_struct_mod_residue.label_asym_id    B 
_pdbx_struct_mod_residue.label_comp_id    M3L 
_pdbx_struct_mod_residue.label_seq_id     6 
_pdbx_struct_mod_residue.auth_asym_id     B 
_pdbx_struct_mod_residue.auth_comp_id     M3L 
_pdbx_struct_mod_residue.auth_seq_id      36 
_pdbx_struct_mod_residue.PDB_ins_code     ? 
_pdbx_struct_mod_residue.parent_comp_id   LYS 
_pdbx_struct_mod_residue.details          N-TRIMETHYLLYSINE 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_and_software_defined_assembly 
_pdbx_struct_assembly.method_details       PQS 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2012-10-31 
2 'Structure model' 1 1 2012-11-07 
3 'Structure model' 1 2 2012-12-19 
4 'Structure model' 1 3 2023-06-14 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Atomic model'         
2 2 'Structure model' 'Database references'  
3 3 'Structure model' 'Database references'  
4 4 'Structure model' 'Data collection'      
5 4 'Structure model' 'Database references'  
6 4 'Structure model' 'Derived calculations' 
7 4 'Structure model' Other                  
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' database_2            
2 4 'Structure model' pdbx_database_status  
3 4 'Structure model' pdbx_nmr_software     
4 4 'Structure model' pdbx_nmr_spectrometer 
5 4 'Structure model' struct_conn           
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_database_2.pdbx_DOI'                       
2  4 'Structure model' '_database_2.pdbx_database_accession'        
3  4 'Structure model' '_pdbx_database_status.status_code_cs'       
4  4 'Structure model' '_pdbx_database_status.status_code_mr'       
5  4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 
6  4 'Structure model' '_pdbx_nmr_software.name'                    
7  4 'Structure model' '_pdbx_nmr_spectrometer.model'               
8  4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'        
9  4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'            
10 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'             
11 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'           
12 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'           
13 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'            
14 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'            
15 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'             
16 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'           
17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'           
18 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'            
# 
loop_
_pdbx_validate_close_contact.id 
_pdbx_validate_close_contact.PDB_model_num 
_pdbx_validate_close_contact.auth_atom_id_1 
_pdbx_validate_close_contact.auth_asym_id_1 
_pdbx_validate_close_contact.auth_comp_id_1 
_pdbx_validate_close_contact.auth_seq_id_1 
_pdbx_validate_close_contact.PDB_ins_code_1 
_pdbx_validate_close_contact.label_alt_id_1 
_pdbx_validate_close_contact.auth_atom_id_2 
_pdbx_validate_close_contact.auth_asym_id_2 
_pdbx_validate_close_contact.auth_comp_id_2 
_pdbx_validate_close_contact.auth_seq_id_2 
_pdbx_validate_close_contact.PDB_ins_code_2 
_pdbx_validate_close_contact.label_alt_id_2 
_pdbx_validate_close_contact.dist 
1 2 HB2  A ASP 76 ? ? HB2 B M3L 36 ? ? 1.32 
2 7 HD23 A LEU 47 ? ? HE2 B HIS 39 ? ? 1.30 
3 7 OE1  A GLU 75 ? ? HZ2 B LYS 37 ? ? 1.58 
# 
loop_
_pdbx_validate_torsion.id 
_pdbx_validate_torsion.PDB_model_num 
_pdbx_validate_torsion.auth_comp_id 
_pdbx_validate_torsion.auth_asym_id 
_pdbx_validate_torsion.auth_seq_id 
_pdbx_validate_torsion.PDB_ins_code 
_pdbx_validate_torsion.label_alt_id 
_pdbx_validate_torsion.phi 
_pdbx_validate_torsion.psi 
1  1  PRO A 93 ? ? -77.56  42.07  
2  2  ASN A 77 ? ? 76.08   -31.62 
3  3  LYS A 39 ? ? 67.13   103.04 
4  3  PRO A 93 ? ? -54.54  109.90 
5  3  M3L B 36 ? ? 60.06   78.69  
6  4  ASN A 77 ? ? 74.01   -3.20  
7  4  THR B 32 ? ? -107.13 -69.89 
8  4  ARG B 40 ? ? 68.68   179.44 
9  5  LYS A 39 ? ? 65.44   81.95  
10 5  ASN A 77 ? ? 77.76   -31.28 
11 6  VAL B 35 ? ? 62.27   93.83  
12 7  LYS A 39 ? ? 62.96   102.74 
13 7  THR B 32 ? ? 49.46   -98.91 
14 8  ASN A 77 ? ? 72.22   -1.03  
15 9  M3L B 36 ? ? -167.17 114.53 
16 9  ARG B 40 ? ? 71.31   153.74 
17 10 ARG B 40 ? ? 62.69   97.52  
#