HEADER HYDROLASE 08-OCT-12 4BDW TITLE THE STRUCTURE OF THE FNI-EGF TANDEM DOMAIN OF COAGULATION FACTOR XII TITLE 2 IN COMPLEX WITH HOLMIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAGULATION FACTOR XIIA HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FNI-EGF, RESIDUES 133-215; COMPND 5 SYNONYM: COAGULATION FACTOR XII, HAGEMAN FACTOR, HAF; COMPND 6 EC: 3.4.21.38; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: X-33; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PPICZALPHA KEYWDS HYDROLASE, FNI DOMAIN, EGF DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR D.X.BERINGER,L.M.J.KROON-BATENBURG REVDAT 5 12-JUL-17 4BDW 1 REVDAT 4 28-DEC-16 4BDW 1 JRNL REVDAT 3 17-APR-13 4BDW 1 TITLE REMARK REVDAT 2 20-FEB-13 4BDW 1 JRNL REVDAT 1 13-FEB-13 4BDW 0 JRNL AUTH D.X.BERINGER,L.M.J.KROON-BATENBURG JRNL TITL THE STRUCTURE OF THE FNI-EGF-LIKE TANDEM DOMAIN OF JRNL TITL 2 COAGULATION FACTOR XII SOLVED USING SIRAS. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 69 94 2013 JRNL REFN ESSN 1744-3091 JRNL PMID 23385745 JRNL DOI 10.1107/S1744309113000286 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 4054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 332 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1314 - 3.1505 1.00 3521 157 0.1973 0.2006 REMARK 3 2 3.1505 - 2.5007 0.99 3451 175 0.2847 0.3142 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.00 REMARK 3 B_SOL : 0.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 675 REMARK 3 ANGLE : 0.699 906 REMARK 3 CHIRALITY : 0.051 92 REMARK 3 PLANARITY : 0.003 123 REMARK 3 DIHEDRAL : 14.551 247 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 3:27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1694 -0.0324 -25.1373 REMARK 3 T TENSOR REMARK 3 T11: 0.2739 T22: 0.3152 REMARK 3 T33: 0.3519 T12: -0.0009 REMARK 3 T13: 0.0481 T23: 0.0954 REMARK 3 L TENSOR REMARK 3 L11: 7.9157 L22: 8.4941 REMARK 3 L33: 6.5857 L12: -2.9984 REMARK 3 L13: -3.0808 L23: 2.8999 REMARK 3 S TENSOR REMARK 3 S11: -0.4568 S12: -0.3289 S13: -0.3910 REMARK 3 S21: 0.1004 S22: 0.1612 S23: -0.3085 REMARK 3 S31: 0.1657 S32: 0.6573 S33: 0.2960 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 28:33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4602 -1.7974 -27.8108 REMARK 3 T TENSOR REMARK 3 T11: 0.4987 T22: 0.8043 REMARK 3 T33: 0.4300 T12: 0.0074 REMARK 3 T13: 0.1191 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 2.0004 L22: 4.0901 REMARK 3 L33: 2.0021 L12: 3.0597 REMARK 3 L13: 5.2363 L23: 4.5634 REMARK 3 S TENSOR REMARK 3 S11: -0.5369 S12: 1.5613 S13: -1.6519 REMARK 3 S21: -0.2175 S22: 1.2191 S23: -0.5078 REMARK 3 S31: -0.3097 S32: 3.5708 S33: -0.6753 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 34:43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2608 -6.6759 -28.4130 REMARK 3 T TENSOR REMARK 3 T11: 0.6389 T22: 0.6022 REMARK 3 T33: 0.7600 T12: 0.0150 REMARK 3 T13: 0.2167 T23: -0.0264 REMARK 3 L TENSOR REMARK 3 L11: 2.0021 L22: 5.0075 REMARK 3 L33: 9.7085 L12: 8.2896 REMARK 3 L13: 8.4922 L23: 5.6119 REMARK 3 S TENSOR REMARK 3 S11: 0.7833 S12: 1.1640 S13: -1.9108 REMARK 3 S21: 0.3808 S22: -0.2237 S23: -0.6305 REMARK 3 S31: 1.2231 S32: 0.8252 S33: -0.5490 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 44:69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1296 6.5288 -13.6141 REMARK 3 T TENSOR REMARK 3 T11: 0.5840 T22: 0.8814 REMARK 3 T33: 0.4155 T12: -0.0019 REMARK 3 T13: 0.0188 T23: 0.1223 REMARK 3 L TENSOR REMARK 3 L11: 6.1845 L22: 5.7107 REMARK 3 L33: 9.4356 L12: -0.7553 REMARK 3 L13: -0.4373 L23: 5.3648 REMARK 3 S TENSOR REMARK 3 S11: 0.1888 S12: 0.5606 S13: 0.0527 REMARK 3 S21: -0.8477 S22: -0.7091 S23: -0.5076 REMARK 3 S31: -1.3265 S32: 0.4635 S33: 0.5109 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 70:85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8058 5.5369 -8.7253 REMARK 3 T TENSOR REMARK 3 T11: 0.4861 T22: 1.0130 REMARK 3 T33: 0.6367 T12: -0.0324 REMARK 3 T13: -0.1221 T23: -0.1613 REMARK 3 L TENSOR REMARK 3 L11: 4.5838 L22: 4.2404 REMARK 3 L33: 7.6539 L12: -3.9586 REMARK 3 L13: -1.6577 L23: -0.9763 REMARK 3 S TENSOR REMARK 3 S11: 0.2209 S12: 0.4812 S13: 0.0683 REMARK 3 S21: 0.2097 S22: -0.4194 S23: 0.7421 REMARK 3 S31: 0.1023 S32: -1.2696 S33: 0.1997 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BDW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1290054394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.53520 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : DYNAMICALLY BENDABLE MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4061 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 48.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, 16-18% PEG4,000, 0.2 M REMARK 280 POTASSIUM ACETATE SOAKED IN SAME BUFFER WITH 10 MM HOLMIUM REMARK 280 CHLORIDE, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.12250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 48.12250 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.66550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.12250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 11.83275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.12250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.49825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.12250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.49825 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.12250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 11.83275 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 48.12250 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 48.12250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 23.66550 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 48.12250 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 48.12250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 23.66550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 48.12250 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 35.49825 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 48.12250 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 11.83275 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 48.12250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 11.83275 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 48.12250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 35.49825 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 48.12250 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 48.12250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 23.66550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HO HO A1087 LIES ON A SPECIAL POSITION. REMARK 375 CL CL A1088 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2013 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 17 -7.93 73.12 REMARK 500 THR A 83 -100.61 -133.48 REMARK 500 ALA A 84 32.36 -82.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HO A 1086 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HO A 1087 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1088 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BDX RELATED DB: PDB REMARK 900 THE STRUCTURE OF THE FNI-EGF TANDEM DOMAIN OF COAGULATION FACTOR XII DBREF 4BDW A 3 85 UNP P00748 FA12_HUMAN 133 215 SEQADV 4BDW GLY A 1 UNP P00748 EXPRESSION TAG SEQADV 4BDW SER A 2 UNP P00748 EXPRESSION TAG SEQADV 4BDW PRO A 77 UNP P00748 ALA 207 VARIANT SEQADV 4BDW ALA A 84 UNP P00748 LYS 214 CLONING ARTIFACT SEQRES 1 A 85 GLY SER GLU LYS CYS PHE GLU PRO GLN LEU LEU ARG PHE SEQRES 2 A 85 PHE HIS LYS ASN GLU ILE TRP TYR ARG THR GLU GLN ALA SEQRES 3 A 85 ALA VAL ALA ARG CYS GLN CYS LYS GLY PRO ASP ALA HIS SEQRES 4 A 85 CYS GLN ARG LEU ALA SER GLN ALA CYS ARG THR ASN PRO SEQRES 5 A 85 CYS LEU HIS GLY GLY ARG CYS LEU GLU VAL GLU GLY HIS SEQRES 6 A 85 ARG LEU CYS HIS CYS PRO VAL GLY TYR THR GLY PRO PHE SEQRES 7 A 85 CYS ASP VAL ASP THR ALA ALA HET HO A1086 1 HET HO A1087 1 HET CL A1088 1 HETNAM HO HOLMIUM ATOM HETNAM CL CHLORIDE ION FORMUL 2 HO 2(HO) FORMUL 4 CL CL 1- FORMUL 5 HOH *15(H2 O) SHEET 1 AA 2 CYS A 5 GLU A 7 0 SHEET 2 AA 2 ARG A 12 PHE A 14 -1 O ARG A 12 N GLU A 7 SHEET 1 AB 3 ILE A 19 THR A 23 0 SHEET 2 AB 3 VAL A 28 CYS A 33 -1 O ALA A 29 N ARG A 22 SHEET 3 AB 3 ALA A 38 LEU A 43 -1 O HIS A 39 N GLN A 32 SHEET 1 AC 3 GLN A 46 ALA A 47 0 SHEET 2 AC 3 ARG A 58 GLU A 61 -1 O GLU A 61 N GLN A 46 SHEET 3 AC 3 ARG A 66 HIS A 69 -1 O LEU A 67 N LEU A 60 SHEET 1 AD 2 TYR A 74 THR A 75 0 SHEET 2 AD 2 VAL A 81 ASP A 82 -1 O VAL A 81 N THR A 75 SSBOND 1 CYS A 5 CYS A 33 1555 1555 2.04 SSBOND 2 CYS A 31 CYS A 40 1555 1555 2.04 SSBOND 3 CYS A 48 CYS A 59 1555 1555 2.03 SSBOND 4 CYS A 53 CYS A 68 1555 1555 2.03 SSBOND 5 CYS A 70 CYS A 79 1555 1555 2.03 CISPEP 1 GLY A 35 PRO A 36 0 -1.34 SITE 1 AC1 3 ASP A 82 THR A 83 ALA A 85 SITE 1 AC2 5 ALA A 85 HOH A2012 HOH A2013 HOH A2014 SITE 2 AC2 5 HOH A2015 SITE 1 AC3 1 LYS A 4 CRYST1 96.245 96.245 47.331 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010390 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010390 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021128 0.00000