HEADER TRANSLATION 10-MAR-13 4BEH TITLE SOLUTION STRUCTURE OF HUMAN RIBOSOMAL PROTEIN P1.P2 HETERODIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: 60S ACIDIC RIBOSOMAL PROTEIN P1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 60S ACIDIC RIBOSOMAL PROTEIN P2; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: RENAL CARCINOMA ANTIGEN NY-REN-44; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET3A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VARIANT: C41; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_VECTOR: PET3A KEYWDS STALK, RIBOSOME, TRANSLATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.M.LEE,K.YUSA,L.O.CHU,C.WING-HENG YU,P.C.SHAW,M.OONO,T.MIYOSHI, AUTHOR 2 K.ITO,K.B.WONG,T.UCHIUMI REVDAT 3 14-JUN-23 4BEH 1 REMARK ATOM REVDAT 2 30-OCT-13 4BEH 1 JRNL REVDAT 1 14-AUG-13 4BEH 0 JRNL AUTH K.M.LEE,K.YUSA,L.O.CHU,C.WING-HENG YU,M.OONO,T.MIYOSHI, JRNL AUTH 2 K.ITO,P.C.SHAW,K.B.WONG,T.UCHIUMI JRNL TITL SOLUTION STRUCTURE OF HUMAN P1P2 HETERODIMER PROVIDES JRNL TITL 2 INSIGHTS INTO THE ROLE OF EUKARYOTIC STALK IN RECRUITING THE JRNL TITL 3 RIBOSOME-INACTIVATING PROTEIN TRICHOSANTHIN TO THE RIBOSOME. JRNL REF NUCLEIC ACIDS RES. V. 41 8776 2013 JRNL REFN ISSN 0305-1048 JRNL PMID 23892290 JRNL DOI 10.1093/NAR/GKT636 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BEH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1290056090. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1.0 ATM REMARK 210 SAMPLE CONTENTS : 10% WATER/90% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; TOCSY; COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW REMARK 210 METHOD USED : ARIA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION AND REMARK 210 LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 8 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ASYMMETRICALLY LABELED P1.P2 HETERODIMER. C13, REMARK 210 N15P1.P2 AND P1.C13,N15P2. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 95 HZ1 LYS A 98 1.54 REMARK 500 OD2 ASP B 222 HZ2 LYS B 225 1.59 REMARK 500 HG SER B 286 OE1 GLU B 301 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 17 -78.26 -17.27 REMARK 500 1 ASP A 18 73.61 -158.97 REMARK 500 1 ASP A 19 -158.56 -132.46 REMARK 500 1 LEU A 51 -131.02 -88.38 REMARK 500 1 ALA A 52 -12.61 68.97 REMARK 500 1 ASN A 55 -95.55 -7.46 REMARK 500 1 ILE A 56 -66.24 -153.69 REMARK 500 1 ALA A 65 -70.58 -165.89 REMARK 500 1 THR A 84 168.85 54.25 REMARK 500 1 ALA A 86 143.96 67.90 REMARK 500 1 ALA A 96 -62.81 -120.18 REMARK 500 1 GLU A 102 36.80 -86.17 REMARK 500 1 GLU A 103 122.92 -170.30 REMARK 500 1 ASP A 105 -127.30 -139.37 REMARK 500 1 ARG B 202 -128.39 -128.34 REMARK 500 1 PRO B 218 92.69 -59.82 REMARK 500 1 ASN B 247 109.43 -58.84 REMARK 500 1 LEU B 262 -98.05 -114.16 REMARK 500 1 SER B 264 -150.96 168.98 REMARK 500 1 VAL B 271 112.45 43.83 REMARK 500 1 VAL B 273 75.36 51.98 REMARK 500 1 PRO B 277 85.92 -66.11 REMARK 500 1 ALA B 287 85.87 66.32 REMARK 500 1 GLU B 292 65.21 -117.72 REMARK 500 1 LYS B 294 5.50 -162.40 REMARK 500 1 ASP B 296 96.06 66.61 REMARK 500 1 GLU B 300 -89.59 -124.53 REMARK 500 1 GLU B 301 78.83 58.84 REMARK 500 1 GLU B 303 -73.86 -150.77 REMARK 500 1 ASP B 307 117.26 67.55 REMARK 500 1 MET B 309 -34.79 70.32 REMARK 500 1 LEU B 313 76.49 -104.42 REMARK 500 2 ASP A 18 -84.68 -154.31 REMARK 500 2 VAL A 23 95.21 -67.17 REMARK 500 2 PRO A 41 -17.11 -47.13 REMARK 500 2 LEU A 51 -128.29 -83.16 REMARK 500 2 ALA A 52 -1.47 65.41 REMARK 500 2 ASN A 53 -46.74 -144.56 REMARK 500 2 ASN A 62 34.18 -88.75 REMARK 500 2 ALA A 69 75.46 50.92 REMARK 500 2 ALA A 71 114.87 64.30 REMARK 500 2 THR A 84 122.83 71.27 REMARK 500 2 PRO A 88 73.09 -63.60 REMARK 500 2 ALA A 89 -85.74 67.07 REMARK 500 2 GLU A 90 74.05 47.34 REMARK 500 2 ALA A 96 88.10 -163.32 REMARK 500 2 LYS A 98 -48.00 -132.79 REMARK 500 2 GLU A 99 72.23 57.85 REMARK 500 2 GLU A 103 101.94 63.62 REMARK 500 2 ILE B 232 -89.13 -99.25 REMARK 500 REMARK 500 THIS ENTRY HAS 635 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19086 RELATED DB: BMRB DBREF 4BEH A 1 114 UNP P05386 RLA1_HUMAN 1 114 DBREF 4BEH B 201 315 UNP P05387 RLA2_HUMAN 1 115 SEQADV 4BEH ALA B 200 UNP P05387 EXPRESSION TAG SEQRES 1 A 114 MET ALA SER VAL SER GLU LEU ALA CYS ILE TYR SER ALA SEQRES 2 A 114 LEU ILE LEU HIS ASP ASP GLU VAL THR VAL THR GLU ASP SEQRES 3 A 114 LYS ILE ASN ALA LEU ILE LYS ALA ALA GLY VAL ASN VAL SEQRES 4 A 114 GLU PRO PHE TRP PRO GLY LEU PHE ALA LYS ALA LEU ALA SEQRES 5 A 114 ASN VAL ASN ILE GLY SER LEU ILE CYS ASN VAL GLY ALA SEQRES 6 A 114 GLY GLY PRO ALA PRO ALA ALA GLY ALA ALA PRO ALA GLY SEQRES 7 A 114 GLY PRO ALA PRO SER THR ALA ALA ALA PRO ALA GLU GLU SEQRES 8 A 114 LYS LYS VAL GLU ALA LYS LYS GLU GLU SER GLU GLU SER SEQRES 9 A 114 ASP ASP ASP MET GLY PHE GLY LEU PHE ASP SEQRES 1 B 116 ALA MET ARG TYR VAL ALA SER TYR LEU LEU ALA ALA LEU SEQRES 2 B 116 GLY GLY ASN SER SER PRO SER ALA LYS ASP ILE LYS LYS SEQRES 3 B 116 ILE LEU ASP SER VAL GLY ILE GLU ALA ASP ASP ASP ARG SEQRES 4 B 116 LEU ASN LYS VAL ILE SER GLU LEU ASN GLY LYS ASN ILE SEQRES 5 B 116 GLU ASP VAL ILE ALA GLN GLY ILE GLY LYS LEU ALA SER SEQRES 6 B 116 VAL PRO ALA GLY GLY ALA VAL ALA VAL SER ALA ALA PRO SEQRES 7 B 116 GLY SER ALA ALA PRO ALA ALA GLY SER ALA PRO ALA ALA SEQRES 8 B 116 ALA GLU GLU LYS LYS ASP GLU LYS LYS GLU GLU SER GLU SEQRES 9 B 116 GLU SER ASP ASP ASP MET GLY PHE GLY LEU PHE ASP HELIX 1 1 SER A 3 HIS A 17 1 15 HELIX 2 2 THR A 24 GLY A 36 1 13 HELIX 3 3 PRO A 41 LEU A 51 1 11 HELIX 4 4 ILE A 56 CYS A 61 5 6 HELIX 5 5 TYR B 203 GLY B 213 1 11 HELIX 6 6 SER B 219 GLY B 231 1 13 HELIX 7 7 ASP B 235 ASN B 247 1 13 HELIX 8 8 ASN B 250 GLN B 257 1 8 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1