HEADER OXIDOREDUCTASE 27-MAR-13 4BGL TITLE SUPEROXIDE REDUCTASE (NEELAREDOXIN) FROM ARCHAEOGLOBUS FULGIDUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE REDUCTASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: SOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PT7AFNLR KEYWDS OXIDOREDUCTASE, OXYGEN DETOXIFICATION EXPDTA X-RAY DIFFRACTION AUTHOR T.M.BANDEIRAS,J.V.RODRIGUES,C.M.SOUSA,A.R.BARRADAS,F.G.PINHO, AUTHOR 2 A.F.PINTO,M.TEIXEIRA,P.M.MATIAS,C.V.ROMAO REVDAT 5 08-MAY-24 4BGL 1 REMARK LINK REVDAT 4 13-JAN-16 4BGL 1 JRNL REVDAT 3 18-NOV-15 4BGL 1 JRNL REVDAT 2 14-OCT-15 4BGL 1 JRNL REVDAT 1 09-APR-14 4BGL 0 JRNL AUTH T.M.BANDEIRAS,J.V.RODRIGUES,C.M.SOUSA,A.R.BARRADAS, JRNL AUTH 2 F.G.PINHO,A.F.PINTO,M.TEIXEIRA,P.M.MATIAS,C.V.ROMAO JRNL TITL SUPEROXIDE REDUCTASE FROM GIARDIA INTESTINALIS: STRUCTURAL JRNL TITL 2 CHARACTERIZATION OF THE FIRST SOR FROM A EUKARYOTIC ORGANISM JRNL TITL 3 SHOWS AN IRON CENTRE THAT IS HIGHLY SENSITIVE TO JRNL TITL 4 PHOTOREDUCTION JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 2236 2015 JRNL REFN ISSN 0907-4449 JRNL PMID 26527141 JRNL DOI 10.1107/S1399004715015825 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.M.BANDEIRAS,C.V.ROMAO,J.V.RODRIGUES,M.TEIXEIRA,P.M.MATIAS REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND X-RAY CRYSTALLOGRAPHIC REMARK 1 TITL 2 ANALYSIS OF ARCHAEOGLOBUS FULGIDUS NEELAREDOXIN. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 66 316 2010 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 20208170 REMARK 1 DOI 10.1107/S1744309110000916 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 41259 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2184 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3008 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 153 REMARK 3 BIN FREE R VALUE : 0.3400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3834 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 342 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.143 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.881 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3988 ; 0.026 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5400 ; 1.951 ; 1.937 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 493 ; 6.711 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 168 ;36.395 ;24.524 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 616 ;13.747 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;18.604 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 588 ; 0.159 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3024 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2461 ; 2.184 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3972 ; 2.601 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1527 ; 9.570 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1427 ; 7.988 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 4BGL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1290056298. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42230 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 37.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: HKL2MAP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM AMMONIUM SULFATE, 100 MM SODIUM REMARK 280 ACETATE PH 4.6, 15%(V/V) PEG 4000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.72150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.86150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.86150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.36075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.86150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.86150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 139.08225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.86150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.86150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.36075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.86150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.86150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 139.08225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 92.72150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 465 GLU D 125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG D 68 OE2 GLU D 70 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 68 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG D 68 NE - CZ - NH1 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG D 68 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 74 32.82 -140.19 REMARK 500 ALA C 23 86.98 -157.39 REMARK 500 HIS C 74 31.18 -142.31 REMARK 500 ALA D 23 47.01 -145.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A1001 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 12 OE2 REMARK 620 2 HIS A 14 NE2 84.5 REMARK 620 3 HIS A 40 NE2 79.5 84.3 REMARK 620 4 HIS A 46 NE2 82.3 166.6 90.9 REMARK 620 5 CYS A 110 SG 169.3 105.7 98.2 87.3 REMARK 620 6 HIS A 113 ND1 83.4 89.0 162.1 91.9 99.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B1001 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 12 OE2 REMARK 620 2 HIS B 14 NE2 82.5 REMARK 620 3 HIS B 40 NE2 80.4 86.3 REMARK 620 4 HIS B 46 NE2 84.5 166.5 88.3 REMARK 620 5 CYS B 110 SG 173.3 104.1 101.1 89.0 REMARK 620 6 HIS B 113 ND1 81.2 92.2 161.6 89.0 97.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE C1001 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 12 OE2 REMARK 620 2 HIS C 14 NE2 79.5 REMARK 620 3 HIS C 40 NE2 84.3 89.6 REMARK 620 4 HIS C 46 NE2 86.9 166.2 86.3 REMARK 620 5 CYS C 110 SG 172.7 107.5 97.4 86.1 REMARK 620 6 HIS C 113 ND1 78.4 85.1 162.6 95.0 100.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE D1001 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 12 OE2 REMARK 620 2 HIS D 14 NE2 79.9 REMARK 620 3 HIS D 40 NE2 82.0 91.3 REMARK 620 4 HIS D 46 NE2 86.6 166.4 85.3 REMARK 620 5 CYS D 110 SG 173.4 106.5 96.0 87.0 REMARK 620 6 HIS D 113 ND1 85.1 86.8 167.0 93.5 96.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE D 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 1125 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1126 DBREF 4BGL A 1 125 UNP O29903 SOR_ARCFU 1 125 DBREF 4BGL B 1 125 UNP O29903 SOR_ARCFU 1 125 DBREF 4BGL C 1 125 UNP O29903 SOR_ARCFU 1 125 DBREF 4BGL D 1 125 UNP O29903 SOR_ARCFU 1 125 SEQRES 1 A 125 MET GLU LEU PHE GLN THR ALA ASP TRP LYS LYS GLU LYS SEQRES 2 A 125 HIS VAL PRO VAL ILE GLU VAL LEU ARG ALA GLU GLY GLY SEQRES 3 A 125 VAL VAL GLU VAL LYS VAL SER VAL GLY LYS GLU ILE PRO SEQRES 4 A 125 HIS PRO ASN THR THR GLU HIS HIS ILE ALA TRP ILE GLU SEQRES 5 A 125 LEU VAL PHE GLN PRO GLU GLY SER LYS PHE PRO TYR VAL SEQRES 6 A 125 VAL GLY ARG ALA GLU PHE ALA ALA HIS GLY ALA SER VAL SEQRES 7 A 125 ASP GLY PRO ASN THR SER GLY VAL TYR THR ASP PRO VAL SEQRES 8 A 125 ALA VAL PHE ALA PHE LYS ALA GLU LYS SER GLY LYS LEU SEQRES 9 A 125 THR ALA PHE SER TYR CYS ASN ILE HIS GLY LEU TRP MET SEQRES 10 A 125 GLY GLU ALA THR LEU SER LEU GLU SEQRES 1 B 125 MET GLU LEU PHE GLN THR ALA ASP TRP LYS LYS GLU LYS SEQRES 2 B 125 HIS VAL PRO VAL ILE GLU VAL LEU ARG ALA GLU GLY GLY SEQRES 3 B 125 VAL VAL GLU VAL LYS VAL SER VAL GLY LYS GLU ILE PRO SEQRES 4 B 125 HIS PRO ASN THR THR GLU HIS HIS ILE ALA TRP ILE GLU SEQRES 5 B 125 LEU VAL PHE GLN PRO GLU GLY SER LYS PHE PRO TYR VAL SEQRES 6 B 125 VAL GLY ARG ALA GLU PHE ALA ALA HIS GLY ALA SER VAL SEQRES 7 B 125 ASP GLY PRO ASN THR SER GLY VAL TYR THR ASP PRO VAL SEQRES 8 B 125 ALA VAL PHE ALA PHE LYS ALA GLU LYS SER GLY LYS LEU SEQRES 9 B 125 THR ALA PHE SER TYR CYS ASN ILE HIS GLY LEU TRP MET SEQRES 10 B 125 GLY GLU ALA THR LEU SER LEU GLU SEQRES 1 C 125 MET GLU LEU PHE GLN THR ALA ASP TRP LYS LYS GLU LYS SEQRES 2 C 125 HIS VAL PRO VAL ILE GLU VAL LEU ARG ALA GLU GLY GLY SEQRES 3 C 125 VAL VAL GLU VAL LYS VAL SER VAL GLY LYS GLU ILE PRO SEQRES 4 C 125 HIS PRO ASN THR THR GLU HIS HIS ILE ALA TRP ILE GLU SEQRES 5 C 125 LEU VAL PHE GLN PRO GLU GLY SER LYS PHE PRO TYR VAL SEQRES 6 C 125 VAL GLY ARG ALA GLU PHE ALA ALA HIS GLY ALA SER VAL SEQRES 7 C 125 ASP GLY PRO ASN THR SER GLY VAL TYR THR ASP PRO VAL SEQRES 8 C 125 ALA VAL PHE ALA PHE LYS ALA GLU LYS SER GLY LYS LEU SEQRES 9 C 125 THR ALA PHE SER TYR CYS ASN ILE HIS GLY LEU TRP MET SEQRES 10 C 125 GLY GLU ALA THR LEU SER LEU GLU SEQRES 1 D 125 MET GLU LEU PHE GLN THR ALA ASP TRP LYS LYS GLU LYS SEQRES 2 D 125 HIS VAL PRO VAL ILE GLU VAL LEU ARG ALA GLU GLY GLY SEQRES 3 D 125 VAL VAL GLU VAL LYS VAL SER VAL GLY LYS GLU ILE PRO SEQRES 4 D 125 HIS PRO ASN THR THR GLU HIS HIS ILE ALA TRP ILE GLU SEQRES 5 D 125 LEU VAL PHE GLN PRO GLU GLY SER LYS PHE PRO TYR VAL SEQRES 6 D 125 VAL GLY ARG ALA GLU PHE ALA ALA HIS GLY ALA SER VAL SEQRES 7 D 125 ASP GLY PRO ASN THR SER GLY VAL TYR THR ASP PRO VAL SEQRES 8 D 125 ALA VAL PHE ALA PHE LYS ALA GLU LYS SER GLY LYS LEU SEQRES 9 D 125 THR ALA PHE SER TYR CYS ASN ILE HIS GLY LEU TRP MET SEQRES 10 D 125 GLY GLU ALA THR LEU SER LEU GLU HET FE A1001 1 HET FE B1001 1 HET GOL B1126 12 HET FE C1001 1 HET FE D1001 1 HET GOL D1125 6 HETNAM FE FE (III) ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 FE 4(FE 3+) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 11 HOH *342(H2 O) SHEET 1 AA10 PHE A 4 GLN A 5 0 SHEET 2 AA10 GLY A 114 LEU A 122 1 O LEU A 115 N GLN A 5 SHEET 3 AA10 GLY A 102 CYS A 110 -1 O GLY A 102 N LEU A 122 SHEET 4 AA10 ILE A 48 PRO A 57 -1 N ALA A 49 O TYR A 109 SHEET 5 AA10 TYR A 64 PHE A 71 -1 O TYR A 64 N PHE A 55 SHEET 6 AA10 TYR C 64 PHE C 71 -1 O ARG C 68 N GLU A 70 SHEET 7 AA10 ILE C 48 PRO C 57 -1 O ALA C 49 N PHE C 71 SHEET 8 AA10 GLY C 102 CYS C 110 -1 O LYS C 103 N GLN C 56 SHEET 9 AA10 GLY C 114 LEU C 122 -1 O GLY C 114 N CYS C 110 SHEET 10 AA10 PHE C 4 GLN C 5 1 O GLN C 5 N MET C 117 SHEET 1 AB 4 VAL A 17 GLU A 24 0 SHEET 2 AB 4 VAL A 27 SER A 33 -1 O VAL A 27 N GLU A 24 SHEET 3 AB 4 VAL A 91 LYS A 97 -1 O ALA A 92 N VAL A 32 SHEET 4 AB 4 TYR C 87 THR C 88 -1 O TYR C 87 N LYS A 97 SHEET 1 AC 4 TYR A 87 THR A 88 0 SHEET 2 AC 4 VAL C 91 LYS C 97 -1 O LYS C 97 N TYR A 87 SHEET 3 AC 4 VAL C 27 SER C 33 -1 O VAL C 28 N PHE C 96 SHEET 4 AC 4 VAL C 17 GLU C 24 -1 O VAL C 17 N SER C 33 SHEET 1 BA10 PHE B 4 GLN B 5 0 SHEET 2 BA10 GLY B 114 LEU B 122 1 O LEU B 115 N GLN B 5 SHEET 3 BA10 GLY B 102 CYS B 110 -1 O GLY B 102 N LEU B 122 SHEET 4 BA10 ILE B 48 PRO B 57 -1 N ALA B 49 O TYR B 109 SHEET 5 BA10 TYR B 64 PHE B 71 -1 O TYR B 64 N PHE B 55 SHEET 6 BA10 TYR D 64 PHE D 71 -1 O ARG D 68 N GLU B 70 SHEET 7 BA10 ILE D 48 PRO D 57 -1 O ALA D 49 N PHE D 71 SHEET 8 BA10 GLY D 102 CYS D 110 -1 O LYS D 103 N GLN D 56 SHEET 9 BA10 GLY D 114 LEU D 122 -1 O GLY D 114 N CYS D 110 SHEET 10 BA10 PHE D 4 GLN D 5 1 O GLN D 5 N MET D 117 SHEET 1 BB 4 VAL B 17 GLU B 24 0 SHEET 2 BB 4 VAL B 27 SER B 33 -1 O VAL B 27 N GLU B 24 SHEET 3 BB 4 VAL B 91 LYS B 97 -1 O ALA B 92 N VAL B 32 SHEET 4 BB 4 TYR D 87 THR D 88 -1 O TYR D 87 N LYS B 97 SHEET 1 BC 4 TYR B 87 THR B 88 0 SHEET 2 BC 4 VAL D 91 LYS D 97 -1 O LYS D 97 N TYR B 87 SHEET 3 BC 4 VAL D 27 SER D 33 -1 O VAL D 28 N PHE D 96 SHEET 4 BC 4 VAL D 17 ALA D 23 -1 O VAL D 17 N SER D 33 LINK OE2 GLU A 12 FE FE A1001 1555 1555 2.32 LINK NE2 HIS A 14 FE FE A1001 1555 1555 2.00 LINK NE2 HIS A 40 FE FE A1001 1555 1555 2.04 LINK NE2 HIS A 46 FE FE A1001 1555 1555 2.02 LINK SG CYS A 110 FE FE A1001 1555 1555 2.40 LINK ND1 HIS A 113 FE FE A1001 1555 1555 2.02 LINK OE2 GLU B 12 FE FE B1001 1555 1555 2.37 LINK NE2 HIS B 14 FE FE B1001 1555 1555 2.02 LINK NE2 HIS B 40 FE FE B1001 1555 1555 2.02 LINK NE2 HIS B 46 FE FE B1001 1555 1555 2.08 LINK SG CYS B 110 FE FE B1001 1555 1555 2.37 LINK ND1 HIS B 113 FE FE B1001 1555 1555 2.07 LINK OE2 GLU C 12 FE FE C1001 1555 1555 2.30 LINK NE2 HIS C 14 FE FE C1001 1555 1555 2.01 LINK NE2 HIS C 40 FE FE C1001 1555 1555 2.04 LINK NE2 HIS C 46 FE FE C1001 1555 1555 2.01 LINK SG CYS C 110 FE FE C1001 1555 1555 2.38 LINK ND1 HIS C 113 FE FE C1001 1555 1555 2.07 LINK OE2 GLU D 12 FE FE D1001 1555 1555 2.31 LINK NE2 HIS D 14 FE FE D1001 1555 1555 2.03 LINK NE2 HIS D 40 FE FE D1001 1555 1555 2.06 LINK NE2 HIS D 46 FE FE D1001 1555 1555 2.02 LINK SG CYS D 110 FE FE D1001 1555 1555 2.41 LINK ND1 HIS D 113 FE FE D1001 1555 1555 2.05 SITE 1 AC1 6 GLU A 12 HIS A 14 HIS A 40 HIS A 46 SITE 2 AC1 6 CYS A 110 HIS A 113 SITE 1 AC2 6 GLU B 12 HIS B 14 HIS B 40 HIS B 46 SITE 2 AC2 6 CYS B 110 HIS B 113 SITE 1 AC3 6 GLU C 12 HIS C 14 HIS C 40 HIS C 46 SITE 2 AC3 6 CYS C 110 HIS C 113 SITE 1 AC4 6 GLU D 12 HIS D 14 HIS D 40 HIS D 46 SITE 2 AC4 6 CYS D 110 HIS D 113 SITE 1 AC5 8 HIS A 47 PHE A 71 HIS A 74 HOH A2043 SITE 2 AC5 8 HIS D 47 PHE D 71 HIS D 74 HOH D2043 SITE 1 AC6 7 HIS B 47 ALA B 49 PHE B 71 HIS B 74 SITE 2 AC6 7 HOH B2037 HOH B2074 HIS C 47 CRYST1 75.723 75.723 185.443 90.00 90.00 90.00 P 41 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013206 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013206 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005392 0.00000