HEADER VIRAL PROTEIN/RNA 03-APR-13 4BHH TITLE CRYSTAL STRUCTURE OF TETRAMER OF LA CROSSE VIRUS NUCLEOPROTEIN IN TITLE 2 COMPLEX WITH SSRNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: B, D, F, Z; COMPND 4 SYNONYM: NUCLEOCAPSID PROTEIN, PROTEIN N; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: POLY-URIDINE 45-MER; COMPND 8 CHAIN: R; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LA CROSSE VIRUS; SOURCE 3 ORGANISM_TAXID: 11577; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET9A; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630 KEYWDS VIRAL PROTEIN-RNA COMPLEX, RNA-BINDING, GENOME PACKAGING EXPDTA X-RAY DIFFRACTION AUTHOR J.REGUERA,H.MALET,F.WEBER,S.CUSACK REVDAT 3 20-DEC-23 4BHH 1 REMARK REVDAT 2 15-MAY-13 4BHH 1 JRNL REVDAT 1 24-APR-13 4BHH 0 JRNL AUTH J.REGUERA,H.MALET,F.WEBER,S.CUSACK JRNL TITL STRUCTURAL BASIS FOR ENCAPSIDATION OF GENOMIC RNA BY LA JRNL TITL 2 CROSSE ORTHOBUNYAVIRUS NUCLEOPROTEIN. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 7246 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23589854 JRNL DOI 10.1073/PNAS.1302298110 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 16130 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 867 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1197 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.3240 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7282 REMARK 3 NUCLEIC ACID ATOMS : 877 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.05000 REMARK 3 B22 (A**2) : -5.29000 REMARK 3 B33 (A**2) : 10.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.55000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.621 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.502 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 33.466 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8424 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7485 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11564 ; 1.120 ; 1.867 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17293 ; 0.864 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 903 ; 6.386 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 368 ;38.065 ;24.239 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1283 ;16.572 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;12.848 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1231 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8917 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1959 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 4 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B F REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 19 B 212 1 REMARK 3 1 F 19 F 212 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 1 B (A**2): 3080 ; 8.64 ; 0.50 REMARK 3 TIGHT THERMAL 1 F (A**2): 3080 ; 8.64 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : D Z REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 D 19 D 212 1 REMARK 3 1 Z 19 Z 212 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 2 D (A**2): 3080 ; 9.40 ; 0.50 REMARK 3 TIGHT THERMAL 2 Z (A**2): 3080 ; 9.40 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : B F REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 221 B 231 1 REMARK 3 1 F 221 F 231 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 3 B (A**2): 175 ; 10.91 ; 0.50 REMARK 3 TIGHT THERMAL 3 F (A**2): 175 ; 10.91 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : D Z REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 D 221 D 231 1 REMARK 3 1 Z 221 Z 231 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 4 D (A**2): 175 ; 21.70 ; 0.50 REMARK 3 TIGHT THERMAL 4 Z (A**2): 175 ; 21.70 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 4BHH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-APR-13. REMARK 100 THE DEPOSITION ID IS D_1290056373. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18433 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.79000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.890 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4BGP REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE PH 9 AND 10% PEG 5K MME REMARK 280 PROTEIN:RNA RATIO 4:1.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.23000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -175.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, F, R, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LEU B 234 REMARK 465 PRO B 235 REMARK 465 GLY D 0 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ASP D 3 REMARK 465 VAL D 9 REMARK 465 ALA D 10 REMARK 465 SER D 11 REMARK 465 THR D 12 REMARK 465 GLY D 13 REMARK 465 ALA D 14 REMARK 465 ASN D 15 REMARK 465 LEU D 234 REMARK 465 PRO D 235 REMARK 465 GLY F 0 REMARK 465 MET F 1 REMARK 465 LEU F 234 REMARK 465 PRO F 235 REMARK 465 U R 45 REMARK 465 GLY Z 0 REMARK 465 MET Z 1 REMARK 465 SER Z 2 REMARK 465 ASP Z 3 REMARK 465 VAL Z 9 REMARK 465 ALA Z 10 REMARK 465 SER Z 11 REMARK 465 THR Z 12 REMARK 465 GLY Z 13 REMARK 465 ALA Z 14 REMARK 465 ASN Z 15 REMARK 465 LEU Z 234 REMARK 465 PRO Z 235 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU Z 117 OG1 THR Z 121 2.14 REMARK 500 O ALA B 14 N GLY B 16 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU B 4 52.15 72.36 REMARK 500 ALA B 14 -35.83 83.44 REMARK 500 ASN B 15 -55.18 27.34 REMARK 500 PHE B 17 99.43 -35.75 REMARK 500 GLU B 32 -61.93 -22.88 REMARK 500 ASN B 75 42.54 -146.04 REMARK 500 ASN B 87 10.87 -66.54 REMARK 500 THR B 122 -70.89 -84.90 REMARK 500 PHE B 158 -4.25 63.48 REMARK 500 TYR B 186 77.81 -111.48 REMARK 500 LYS B 198 46.05 -82.20 REMARK 500 LYS B 216 105.50 -174.99 REMARK 500 ASP D 112 113.38 -35.78 REMARK 500 PHE D 158 5.97 58.70 REMARK 500 PHE D 230 39.53 -97.48 REMARK 500 SER F 11 -65.17 -98.70 REMARK 500 THR F 12 73.65 32.75 REMARK 500 ALA F 14 -90.30 88.81 REMARK 500 ASN F 15 -17.00 61.46 REMARK 500 GLU F 32 -62.81 -24.06 REMARK 500 ASN F 75 42.02 -145.52 REMARK 500 ASN F 87 8.41 -66.79 REMARK 500 THR F 122 -71.04 -85.91 REMARK 500 PHE F 158 -5.15 63.64 REMARK 500 TYR F 186 74.39 -108.26 REMARK 500 LYS F 198 46.89 -79.92 REMARK 500 TRP F 214 99.83 -65.63 REMARK 500 LYS F 216 109.70 53.11 REMARK 500 TYR Z 7 -124.09 -141.17 REMARK 500 ASP Z 112 113.00 -35.32 REMARK 500 TRP Z 214 30.59 -88.71 REMARK 500 LYS Z 216 159.66 -42.54 REMARK 500 LEU Z 219 -165.13 57.13 REMARK 500 PHE Z 230 36.74 -97.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BGP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LA CROSSE VIRUS NUCLEOPROTEIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 EXTRA G AT N-TERMINUS AFTER HIS-TAG CLEAVAGE DBREF 4BHH B 1 235 UNP P04873 NCAP_BUNLC 1 235 DBREF 4BHH D 1 235 UNP P04873 NCAP_BUNLC 1 235 DBREF 4BHH F 1 235 UNP P04873 NCAP_BUNLC 1 235 DBREF 4BHH R 1 45 PDB 4BHH 4BHH 1 45 DBREF 4BHH Z 1 235 UNP P04873 NCAP_BUNLC 1 235 SEQADV 4BHH GLY B 0 UNP P04873 EXPRESSION TAG SEQADV 4BHH GLY D 0 UNP P04873 EXPRESSION TAG SEQADV 4BHH GLY F 0 UNP P04873 EXPRESSION TAG SEQADV 4BHH GLY Z 0 UNP P04873 EXPRESSION TAG SEQRES 1 B 236 GLY MET SER ASP LEU VAL PHE TYR ASP VAL ALA SER THR SEQRES 2 B 236 GLY ALA ASN GLY PHE ASP PRO ASP ALA GLY TYR MET ASP SEQRES 3 B 236 PHE CYS VAL LYS ASN ALA GLU SER LEU ASN LEU ALA ALA SEQRES 4 B 236 VAL ARG ILE PHE PHE LEU ASN ALA ALA LYS ALA LYS ALA SEQRES 5 B 236 ALA LEU SER ARG LYS PRO GLU ARG LYS ALA ASN PRO LYS SEQRES 6 B 236 PHE GLY GLU TRP GLN VAL GLU VAL ILE ASN ASN HIS PHE SEQRES 7 B 236 PRO GLY ASN ARG ASN ASN PRO ILE GLY ASN ASN ASP LEU SEQRES 8 B 236 THR ILE HIS ARG LEU SER GLY TYR LEU ALA ARG TRP VAL SEQRES 9 B 236 LEU ASP GLN TYR ASN GLU ASN ASP ASP GLU SER GLN HIS SEQRES 10 B 236 GLU LEU ILE ARG THR THR ILE ILE ASN PRO ILE ALA GLU SEQRES 11 B 236 SER ASN GLY VAL GLY TRP ASP SER GLY PRO GLU ILE TYR SEQRES 12 B 236 LEU SER PHE PHE PRO GLY THR GLU MET PHE LEU GLU THR SEQRES 13 B 236 PHE LYS PHE TYR PRO LEU THR ILE GLY ILE HIS ARG VAL SEQRES 14 B 236 LYS GLN GLY MET MET ASP PRO GLN TYR LEU LYS LYS ALA SEQRES 15 B 236 LEU ARG GLN ARG TYR GLY THR LEU THR ALA ASP LYS TRP SEQRES 16 B 236 MET SER GLN LYS VAL ALA ALA ILE ALA LYS SER LEU LYS SEQRES 17 B 236 ASP VAL GLU GLN LEU LYS TRP GLY LYS GLY GLY LEU SER SEQRES 18 B 236 ASP THR ALA LYS THR PHE LEU GLN LYS PHE GLY ILE ARG SEQRES 19 B 236 LEU PRO SEQRES 1 D 236 GLY MET SER ASP LEU VAL PHE TYR ASP VAL ALA SER THR SEQRES 2 D 236 GLY ALA ASN GLY PHE ASP PRO ASP ALA GLY TYR MET ASP SEQRES 3 D 236 PHE CYS VAL LYS ASN ALA GLU SER LEU ASN LEU ALA ALA SEQRES 4 D 236 VAL ARG ILE PHE PHE LEU ASN ALA ALA LYS ALA LYS ALA SEQRES 5 D 236 ALA LEU SER ARG LYS PRO GLU ARG LYS ALA ASN PRO LYS SEQRES 6 D 236 PHE GLY GLU TRP GLN VAL GLU VAL ILE ASN ASN HIS PHE SEQRES 7 D 236 PRO GLY ASN ARG ASN ASN PRO ILE GLY ASN ASN ASP LEU SEQRES 8 D 236 THR ILE HIS ARG LEU SER GLY TYR LEU ALA ARG TRP VAL SEQRES 9 D 236 LEU ASP GLN TYR ASN GLU ASN ASP ASP GLU SER GLN HIS SEQRES 10 D 236 GLU LEU ILE ARG THR THR ILE ILE ASN PRO ILE ALA GLU SEQRES 11 D 236 SER ASN GLY VAL GLY TRP ASP SER GLY PRO GLU ILE TYR SEQRES 12 D 236 LEU SER PHE PHE PRO GLY THR GLU MET PHE LEU GLU THR SEQRES 13 D 236 PHE LYS PHE TYR PRO LEU THR ILE GLY ILE HIS ARG VAL SEQRES 14 D 236 LYS GLN GLY MET MET ASP PRO GLN TYR LEU LYS LYS ALA SEQRES 15 D 236 LEU ARG GLN ARG TYR GLY THR LEU THR ALA ASP LYS TRP SEQRES 16 D 236 MET SER GLN LYS VAL ALA ALA ILE ALA LYS SER LEU LYS SEQRES 17 D 236 ASP VAL GLU GLN LEU LYS TRP GLY LYS GLY GLY LEU SER SEQRES 18 D 236 ASP THR ALA LYS THR PHE LEU GLN LYS PHE GLY ILE ARG SEQRES 19 D 236 LEU PRO SEQRES 1 F 236 GLY MET SER ASP LEU VAL PHE TYR ASP VAL ALA SER THR SEQRES 2 F 236 GLY ALA ASN GLY PHE ASP PRO ASP ALA GLY TYR MET ASP SEQRES 3 F 236 PHE CYS VAL LYS ASN ALA GLU SER LEU ASN LEU ALA ALA SEQRES 4 F 236 VAL ARG ILE PHE PHE LEU ASN ALA ALA LYS ALA LYS ALA SEQRES 5 F 236 ALA LEU SER ARG LYS PRO GLU ARG LYS ALA ASN PRO LYS SEQRES 6 F 236 PHE GLY GLU TRP GLN VAL GLU VAL ILE ASN ASN HIS PHE SEQRES 7 F 236 PRO GLY ASN ARG ASN ASN PRO ILE GLY ASN ASN ASP LEU SEQRES 8 F 236 THR ILE HIS ARG LEU SER GLY TYR LEU ALA ARG TRP VAL SEQRES 9 F 236 LEU ASP GLN TYR ASN GLU ASN ASP ASP GLU SER GLN HIS SEQRES 10 F 236 GLU LEU ILE ARG THR THR ILE ILE ASN PRO ILE ALA GLU SEQRES 11 F 236 SER ASN GLY VAL GLY TRP ASP SER GLY PRO GLU ILE TYR SEQRES 12 F 236 LEU SER PHE PHE PRO GLY THR GLU MET PHE LEU GLU THR SEQRES 13 F 236 PHE LYS PHE TYR PRO LEU THR ILE GLY ILE HIS ARG VAL SEQRES 14 F 236 LYS GLN GLY MET MET ASP PRO GLN TYR LEU LYS LYS ALA SEQRES 15 F 236 LEU ARG GLN ARG TYR GLY THR LEU THR ALA ASP LYS TRP SEQRES 16 F 236 MET SER GLN LYS VAL ALA ALA ILE ALA LYS SER LEU LYS SEQRES 17 F 236 ASP VAL GLU GLN LEU LYS TRP GLY LYS GLY GLY LEU SER SEQRES 18 F 236 ASP THR ALA LYS THR PHE LEU GLN LYS PHE GLY ILE ARG SEQRES 19 F 236 LEU PRO SEQRES 1 R 45 U U U U U U U U U U U U U SEQRES 2 R 45 U U U U U U U U U U U U U SEQRES 3 R 45 U U U U U U U U U U U U U SEQRES 4 R 45 U U U U U U SEQRES 1 Z 236 GLY MET SER ASP LEU VAL PHE TYR ASP VAL ALA SER THR SEQRES 2 Z 236 GLY ALA ASN GLY PHE ASP PRO ASP ALA GLY TYR MET ASP SEQRES 3 Z 236 PHE CYS VAL LYS ASN ALA GLU SER LEU ASN LEU ALA ALA SEQRES 4 Z 236 VAL ARG ILE PHE PHE LEU ASN ALA ALA LYS ALA LYS ALA SEQRES 5 Z 236 ALA LEU SER ARG LYS PRO GLU ARG LYS ALA ASN PRO LYS SEQRES 6 Z 236 PHE GLY GLU TRP GLN VAL GLU VAL ILE ASN ASN HIS PHE SEQRES 7 Z 236 PRO GLY ASN ARG ASN ASN PRO ILE GLY ASN ASN ASP LEU SEQRES 8 Z 236 THR ILE HIS ARG LEU SER GLY TYR LEU ALA ARG TRP VAL SEQRES 9 Z 236 LEU ASP GLN TYR ASN GLU ASN ASP ASP GLU SER GLN HIS SEQRES 10 Z 236 GLU LEU ILE ARG THR THR ILE ILE ASN PRO ILE ALA GLU SEQRES 11 Z 236 SER ASN GLY VAL GLY TRP ASP SER GLY PRO GLU ILE TYR SEQRES 12 Z 236 LEU SER PHE PHE PRO GLY THR GLU MET PHE LEU GLU THR SEQRES 13 Z 236 PHE LYS PHE TYR PRO LEU THR ILE GLY ILE HIS ARG VAL SEQRES 14 Z 236 LYS GLN GLY MET MET ASP PRO GLN TYR LEU LYS LYS ALA SEQRES 15 Z 236 LEU ARG GLN ARG TYR GLY THR LEU THR ALA ASP LYS TRP SEQRES 16 Z 236 MET SER GLN LYS VAL ALA ALA ILE ALA LYS SER LEU LYS SEQRES 17 Z 236 ASP VAL GLU GLN LEU LYS TRP GLY LYS GLY GLY LEU SER SEQRES 18 Z 236 ASP THR ALA LYS THR PHE LEU GLN LYS PHE GLY ILE ARG SEQRES 19 Z 236 LEU PRO HELIX 1 1 ASP B 18 ALA B 31 1 14 HELIX 2 2 GLU B 32 LEU B 34 5 3 HELIX 3 3 ASN B 35 SER B 54 1 20 HELIX 4 4 PHE B 77 ARG B 81 5 5 HELIX 5 5 THR B 91 ASN B 110 1 20 HELIX 6 6 ASP B 112 ILE B 123 1 12 HELIX 7 7 ASN B 125 SER B 130 1 6 HELIX 8 8 GLY B 134 SER B 137 5 4 HELIX 9 9 GLY B 138 PHE B 145 1 8 HELIX 10 10 GLY B 148 LEU B 153 5 6 HELIX 11 11 PHE B 158 GLN B 170 1 13 HELIX 12 12 ASP B 174 TYR B 177 5 4 HELIX 13 13 LEU B 178 ARG B 183 1 6 HELIX 14 14 THR B 190 LYS B 198 1 9 HELIX 15 15 LYS B 198 GLN B 211 1 14 HELIX 16 16 SER B 220 GLN B 228 1 9 HELIX 17 17 LYS B 229 GLY B 231 5 3 HELIX 18 18 ASP D 18 GLU D 32 1 15 HELIX 19 19 ASN D 35 LYS D 56 1 22 HELIX 20 20 PHE D 77 ASN D 83 5 7 HELIX 21 21 THR D 91 GLU D 109 1 19 HELIX 22 22 ASP D 112 ILE D 123 1 12 HELIX 23 23 ASN D 125 SER D 130 1 6 HELIX 24 24 GLY D 134 SER D 137 5 4 HELIX 25 25 GLY D 138 SER D 144 1 7 HELIX 26 26 GLY D 148 LEU D 153 5 6 HELIX 27 27 PHE D 158 GLN D 170 1 13 HELIX 28 28 ASP D 174 TYR D 177 5 4 HELIX 29 29 LEU D 178 GLN D 184 1 7 HELIX 30 30 THR D 190 LYS D 198 1 9 HELIX 31 31 LYS D 198 GLN D 211 1 14 HELIX 32 32 SER D 220 PHE D 230 1 11 HELIX 33 33 ASP F 18 ALA F 31 1 14 HELIX 34 34 GLU F 32 LEU F 34 5 3 HELIX 35 35 ASN F 35 ASN F 45 1 11 HELIX 36 36 ASN F 45 SER F 54 1 10 HELIX 37 37 PHE F 77 ARG F 81 5 5 HELIX 38 38 THR F 91 ASN F 110 1 20 HELIX 39 39 ASP F 112 ILE F 123 1 12 HELIX 40 40 ASN F 125 SER F 130 1 6 HELIX 41 41 GLY F 134 SER F 137 5 4 HELIX 42 42 GLY F 138 PHE F 145 1 8 HELIX 43 43 GLY F 148 LEU F 153 5 6 HELIX 44 44 PHE F 158 GLN F 170 1 13 HELIX 45 45 ASP F 174 TYR F 177 5 4 HELIX 46 46 LEU F 178 ARG F 183 1 6 HELIX 47 47 THR F 190 LYS F 198 1 9 HELIX 48 48 LYS F 198 GLN F 211 1 14 HELIX 49 49 SER F 220 GLN F 228 1 9 HELIX 50 50 LYS F 229 GLY F 231 5 3 HELIX 51 51 ASP Z 18 GLU Z 32 1 15 HELIX 52 52 ASN Z 35 LYS Z 56 1 22 HELIX 53 53 PHE Z 77 ASN Z 83 5 7 HELIX 54 54 THR Z 91 GLU Z 109 1 19 HELIX 55 55 ASP Z 112 ILE Z 123 1 12 HELIX 56 56 ASN Z 125 SER Z 130 1 6 HELIX 57 57 GLY Z 134 SER Z 137 5 4 HELIX 58 58 GLY Z 138 SER Z 144 1 7 HELIX 59 59 GLY Z 148 LEU Z 153 5 6 HELIX 60 60 PHE Z 158 GLN Z 170 1 13 HELIX 61 61 ASP Z 174 TYR Z 177 5 4 HELIX 62 62 LEU Z 178 GLN Z 184 1 7 HELIX 63 63 THR Z 190 LYS Z 198 1 9 HELIX 64 64 LYS Z 198 GLN Z 211 1 14 HELIX 65 65 SER Z 220 PHE Z 230 1 11 SHEET 1 BA 3 VAL B 5 PHE B 6 0 SHEET 2 BA 3 LYS D 64 PHE D 65 1 O LYS D 64 N PHE B 6 SHEET 3 BA 3 TRP D 68 GLN D 69 -1 O TRP D 68 N PHE D 65 SHEET 1 BB 2 LYS B 60 ALA B 61 0 SHEET 2 BB 2 VAL B 72 ILE B 73 -1 O VAL B 72 N ALA B 61 SHEET 1 BC 3 TRP B 68 GLN B 69 0 SHEET 2 BC 3 LYS B 64 PHE B 65 -1 O PHE B 65 N TRP B 68 SHEET 3 BC 3 VAL Z 5 PHE Z 6 1 N PHE Z 6 O LYS B 64 SHEET 1 DA 3 VAL D 5 PHE D 6 0 SHEET 2 DA 3 LYS F 64 PHE F 65 1 O LYS F 64 N PHE D 6 SHEET 3 DA 3 TRP F 68 GLN F 69 -1 O TRP F 68 N PHE F 65 SHEET 1 DB 2 LYS D 60 ALA D 61 0 SHEET 2 DB 2 VAL D 72 ILE D 73 -1 O VAL D 72 N ALA D 61 SHEET 1 FA 3 VAL F 5 PHE F 6 0 SHEET 2 FA 3 LYS Z 64 PHE Z 65 1 O LYS Z 64 N PHE F 6 SHEET 3 FA 3 TRP Z 68 GLN Z 69 -1 O TRP Z 68 N PHE Z 65 SHEET 1 FB 2 LYS F 60 ALA F 61 0 SHEET 2 FB 2 VAL F 72 ILE F 73 -1 O VAL F 72 N ALA F 61 SHEET 1 ZA 2 LYS Z 60 ALA Z 61 0 SHEET 2 ZA 2 VAL Z 72 ILE Z 73 -1 O VAL Z 72 N ALA Z 61 CRYST1 82.950 86.460 90.190 90.00 106.63 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012055 0.000000 0.003601 0.00000 SCALE2 0.000000 0.011566 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011572 0.00000 MTRIX1 1 -0.999566 0.004473 -0.029106 -34.99912 1 MTRIX2 1 -0.006917 0.925079 0.379712 6.35817 1 MTRIX3 1 0.028624 0.379748 -0.924647 -24.62289 1 MTRIX1 2 -0.998958 0.033076 -0.031438 -34.62398 1 MTRIX2 2 0.012472 0.860589 0.509148 4.22588 1 MTRIX3 2 0.043895 0.508225 -0.860105 -23.98873 1 MTRIX1 3 -0.996873 0.045714 0.064448 -32.20720 1 MTRIX2 3 0.072349 0.855987 0.511911 11.56417 1 MTRIX3 3 -0.031765 0.514973 -0.856618 -23.61895 1 MTRIX1 4 -0.996060 -0.071507 -0.052459 -37.33685 1 MTRIX2 4 -0.086800 0.907372 0.411268 3.92409 1 MTRIX3 4 0.018192 0.414201 -0.910004 -23.55891 1