HEADER OXIDOREDUCTASE 29-APR-13 4BKR TITLE ENOYL-ACP REDUCTASE FROM YERSINIA PESTIS (WILDTYPE, REMOVED HISTAG) TITLE 2 WITH COFACTOR NADH COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE REDUCTASE YPZ3_3519; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENOYL-ACP REDUCATSE, TRANS-2-ENOYL-COA REDUCTASE; COMPND 5 EC: 1.3.1.-, 1.3.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 1035377; SOURCE 4 STRAIN: A1122; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS OXIDOREDUCTASE, FATTY ACID BIOSYNTHESIS, ENOYL-ACP REDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.HIRSCHBECK,C.NECKLES,P.J.TONGE,C.KISKER REVDAT 4 20-DEC-23 4BKR 1 REMARK LINK REVDAT 3 15-JUN-16 4BKR 1 JRNL REVDAT 2 25-MAY-16 4BKR 1 JRNL REVDAT 1 14-MAY-14 4BKR 0 JRNL AUTH C.NECKLES,A.PSCHIBUL,C.LAI,M.HIRSCHBECK,J.KUPER,S.DAVOODI, JRNL AUTH 2 J.ZOU,N.LIU,P.PAN,S.SHAH,F.DARYAEE,G.R.BOMMINENI,C.LAI, JRNL AUTH 3 C.SIMMERLING,C.KISKER,P.J.TONGE JRNL TITL SELECTIVITY OF PYRIDONE- AND DIPHENYL ETHER-BASED INHIBITORS JRNL TITL 2 FOR THE YERSINIA PESTIS FABV ENOYL-ACP REDUCTASE. JRNL REF BIOCHEMISTRY V. 55 2992 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27136302 JRNL DOI 10.1021/ACS.BIOCHEM.5B01301 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 48335 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2410 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.5863 - 4.6194 1.00 2876 126 0.1716 0.1945 REMARK 3 2 4.6194 - 3.6680 1.00 2745 156 0.1426 0.1692 REMARK 3 3 3.6680 - 3.2048 1.00 2750 127 0.1643 0.1875 REMARK 3 4 3.2048 - 2.9119 1.00 2704 159 0.1762 0.2244 REMARK 3 5 2.9119 - 2.7033 1.00 2693 136 0.1785 0.2083 REMARK 3 6 2.7033 - 2.5440 1.00 2703 151 0.1763 0.2092 REMARK 3 7 2.5440 - 2.4166 1.00 2677 153 0.1845 0.2073 REMARK 3 8 2.4166 - 2.3115 1.00 2687 143 0.1854 0.2343 REMARK 3 9 2.3115 - 2.2225 1.00 2681 143 0.1916 0.2519 REMARK 3 10 2.2225 - 2.1458 1.00 2683 150 0.1930 0.2283 REMARK 3 11 2.1458 - 2.0787 1.00 2684 134 0.1960 0.2713 REMARK 3 12 2.0787 - 2.0193 1.00 2639 148 0.1989 0.2314 REMARK 3 13 2.0193 - 1.9662 1.00 2713 134 0.2114 0.2536 REMARK 3 14 1.9662 - 1.9182 1.00 2670 149 0.2110 0.2558 REMARK 3 15 1.9182 - 1.8746 1.00 2677 127 0.2271 0.2730 REMARK 3 16 1.8746 - 1.8347 1.00 2647 151 0.2383 0.2574 REMARK 3 17 1.8347 - 1.7980 1.00 2696 123 0.2638 0.3413 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 36.62 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.14460 REMARK 3 B22 (A**2) : 2.14460 REMARK 3 B33 (A**2) : -4.28910 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3413 REMARK 3 ANGLE : 1.084 4642 REMARK 3 CHIRALITY : 0.072 518 REMARK 3 PLANARITY : 0.004 603 REMARK 3 DIHEDRAL : 15.469 1304 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ -10:9999) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9306 -13.1815 6.2030 REMARK 3 T TENSOR REMARK 3 T11: 0.1799 T22: 0.0521 REMARK 3 T33: 0.1174 T12: -0.0079 REMARK 3 T13: -0.0295 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.3873 L22: 1.7673 REMARK 3 L33: 1.0423 L12: 0.0441 REMARK 3 L13: -0.0136 L23: 0.4973 REMARK 3 S TENSOR REMARK 3 S11: -0.0658 S12: 0.0349 S13: -0.0161 REMARK 3 S21: -0.2396 S22: -0.0461 S23: 0.1792 REMARK 3 S31: -0.1555 S32: -0.0519 S33: 0.0288 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BKR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-APR-13. REMARK 100 THE DEPOSITION ID IS D_1290056684. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48371 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 33.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.900 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3ZU3 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 MM (NH4)2SO4 25-38% PEG 4000 100 REMARK 280 MM MES PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.33000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.66000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.66000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.33000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A -6 REMARK 465 GLY A -5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2223 O HOH A 2429 1.69 REMARK 500 O HOH A 2126 O HOH A 2168 1.91 REMARK 500 O HOH A 2349 O HOH A 2361 1.94 REMARK 500 O HOH A 2049 O HOH A 2409 1.98 REMARK 500 O HOH A 2030 O HOH A 2075 1.98 REMARK 500 O HOH A 2041 O HOH A 2090 1.99 REMARK 500 O HOH A 2467 O HOH A 2470 2.02 REMARK 500 O HOH A 2494 O HOH A 2495 2.03 REMARK 500 O HOH A 2199 O HOH A 2201 2.03 REMARK 500 O HOH A 2113 O HOH A 2254 2.04 REMARK 500 O HOH A 2462 O HOH A 2463 2.05 REMARK 500 O HOH A 2378 O HOH A 2385 2.06 REMARK 500 O HOH A 2342 O HOH A 2343 2.07 REMARK 500 O HOH A 2124 O HOH A 2257 2.10 REMARK 500 O HOH A 2478 O HOH A 2479 2.12 REMARK 500 OE1 GLU A 256 O HOH A 2354 2.13 REMARK 500 OE1 GLU A 116 O HOH A 2212 2.13 REMARK 500 O HOH A 2115 O HOH A 2116 2.14 REMARK 500 OG1 THR A 185 O HOH A 2303 2.16 REMARK 500 O HOH A 2340 O HOH A 2346 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2135 O HOH A 2217 2545 2.08 REMARK 500 O HOH A 2135 O HOH A 2416 2545 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 138 49.58 -140.04 REMARK 500 LYS A 148 -68.38 -109.53 REMARK 500 LEU A 157 78.91 -113.27 REMARK 500 TYR A 235 -88.72 -108.04 REMARK 500 HIS A 261 68.70 -101.34 REMARK 500 HIS A 261 73.45 -105.85 REMARK 500 MET A 284 -20.34 80.24 REMARK 500 SER A 321 71.42 -119.37 REMARK 500 ASP A 362 47.96 -103.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2065 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A2113 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A2505 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A2506 DISTANCE = 6.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1404 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 51 O REMARK 620 2 GLY A 54 N 69.7 REMARK 620 3 SER A 138 OG 134.1 65.4 REMARK 620 4 NAI A1400 O1N 91.4 93.6 100.0 REMARK 620 5 NAI A1400 O5B 84.6 153.1 141.1 78.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI A 1400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BKO RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCATASE FABV FROM BURKHOLDERIA PSEUDOMALLEI (APO) REMARK 900 RELATED ID: 4BKQ RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCTASE FROM YERSINIA PESTIS (WILDTYPE)WITH COFACTOR REMARK 900 NADH REMARK 900 RELATED ID: 4BKU RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCTASE FABI FROM BURKHOLDERIA PSEUDOMALLEI WITH REMARK 900 COFACTOR NADH AND INHIBITOR PT155 REMARK 999 REMARK 999 SEQUENCE REMARK 999 NCBI REFERENCE SEQUENCE FOR THIS SEQUENCE IS REMARK 999 NP_671410.1 DBREF 4BKR A 1 399 UNP G0JFF6 G0JFF6_YERPE 1 399 SEQADV 4BKR ARG A -6 UNP G0JFF6 EXPRESSION TAG SEQADV 4BKR GLY A -5 UNP G0JFF6 EXPRESSION TAG SEQADV 4BKR SER A -4 UNP G0JFF6 EXPRESSION TAG SEQADV 4BKR HIS A -3 UNP G0JFF6 EXPRESSION TAG SEQADV 4BKR MET A -2 UNP G0JFF6 EXPRESSION TAG SEQADV 4BKR LEU A -1 UNP G0JFF6 EXPRESSION TAG SEQADV 4BKR GLU A 0 UNP G0JFF6 EXPRESSION TAG SEQRES 1 A 406 ARG GLY SER HIS MET LEU GLU MET ILE ILE LYS PRO ARG SEQRES 2 A 406 VAL ARG GLY PHE ILE CYS VAL THR ALA HIS PRO THR GLY SEQRES 3 A 406 CYS GLU ALA ASN VAL LYS LYS GLN ILE ASP TYR VAL THR SEQRES 4 A 406 THR GLU GLY PRO ILE ALA ASN GLY PRO LYS ARG VAL LEU SEQRES 5 A 406 VAL ILE GLY ALA SER THR GLY TYR GLY LEU ALA ALA ARG SEQRES 6 A 406 ILE THR ALA ALA PHE GLY CYS GLY ALA ASP THR LEU GLY SEQRES 7 A 406 VAL PHE PHE GLU ARG PRO GLY GLU GLU GLY LYS PRO GLY SEQRES 8 A 406 THR SER GLY TRP TYR ASN SER ALA ALA PHE HIS LYS PHE SEQRES 9 A 406 ALA ALA GLN LYS GLY LEU TYR ALA LYS SER ILE ASN GLY SEQRES 10 A 406 ASP ALA PHE SER ASP GLU ILE LYS GLN LEU THR ILE ASP SEQRES 11 A 406 ALA ILE LYS GLN ASP LEU GLY GLN VAL ASP GLN VAL ILE SEQRES 12 A 406 TYR SER LEU ALA SER PRO ARG ARG THR HIS PRO LYS THR SEQRES 13 A 406 GLY GLU VAL PHE ASN SER ALA LEU LYS PRO ILE GLY ASN SEQRES 14 A 406 ALA VAL ASN LEU ARG GLY LEU ASP THR ASP LYS GLU VAL SEQRES 15 A 406 ILE LYS GLU SER VAL LEU GLN PRO ALA THR GLN SER GLU SEQRES 16 A 406 ILE ASP SER THR VAL ALA VAL MET GLY GLY GLU ASP TRP SEQRES 17 A 406 GLN MET TRP ILE ASP ALA LEU LEU ASP ALA GLY VAL LEU SEQRES 18 A 406 ALA GLU GLY ALA GLN THR THR ALA PHE THR TYR LEU GLY SEQRES 19 A 406 GLU LYS ILE THR HIS ASP ILE TYR TRP ASN GLY SER ILE SEQRES 20 A 406 GLY ALA ALA LYS LYS ASP LEU ASP GLN LYS VAL LEU ALA SEQRES 21 A 406 ILE ARG GLU SER LEU ALA ALA HIS GLY GLY GLY ASP ALA SEQRES 22 A 406 ARG VAL SER VAL LEU LYS ALA VAL VAL THR GLN ALA SER SEQRES 23 A 406 SER ALA ILE PRO MET MET PRO LEU TYR LEU SER LEU LEU SEQRES 24 A 406 PHE LYS VAL MET LYS GLU LYS GLY THR HIS GLU GLY CYS SEQRES 25 A 406 ILE GLU GLN VAL TYR SER LEU TYR LYS ASP SER LEU CYS SEQRES 26 A 406 GLY ASP SER PRO HIS MET ASP GLN GLU GLY ARG LEU ARG SEQRES 27 A 406 ALA ASP TYR LYS GLU LEU ASP PRO GLU VAL GLN ASN GLN SEQRES 28 A 406 VAL GLN GLN LEU TRP ASP GLN VAL THR ASN ASP ASN ILE SEQRES 29 A 406 TYR GLN LEU THR ASP PHE VAL GLY TYR LYS SER GLU PHE SEQRES 30 A 406 LEU ASN LEU PHE GLY PHE GLY ILE ASP GLY VAL ASP TYR SEQRES 31 A 406 ASP ALA ASP VAL ASN PRO ASP VAL LYS ILE PRO ASN LEU SEQRES 32 A 406 ILE GLN GLY HET NAI A1400 44 HET GOL A1401 6 HET GOL A1402 6 HET DMS A1403 4 HET NA A1404 1 HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETNAM GOL GLYCEROL HETNAM DMS DIMETHYL SULFOXIDE HETNAM NA SODIUM ION HETSYN NAI NADH HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAI C21 H29 N7 O14 P2 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 DMS C2 H6 O S FORMUL 6 NA NA 1+ FORMUL 7 HOH *505(H2 O) HELIX 1 1 HIS A 16 GLY A 35 1 20 HELIX 2 2 THR A 51 GLY A 64 1 14 HELIX 3 3 THR A 85 LYS A 101 1 17 HELIX 4 4 SER A 114 LEU A 129 1 16 HELIX 5 5 THR A 185 GLY A 197 1 13 HELIX 6 6 GLY A 198 ALA A 211 1 14 HELIX 7 7 GLU A 228 HIS A 232 5 5 HELIX 8 8 GLY A 238 ALA A 260 1 23 HELIX 9 9 THR A 276 ALA A 281 1 6 HELIX 10 10 MET A 284 LYS A 299 1 16 HELIX 11 11 GLY A 304 SER A 316 1 13 HELIX 12 12 ASP A 333 ASP A 338 1 6 HELIX 13 13 ASP A 338 ASP A 350 1 13 HELIX 14 14 ASN A 356 THR A 361 1 6 HELIX 15 15 ASP A 362 PHE A 374 1 13 SHEET 1 AA 2 VAL A 7 ARG A 8 0 SHEET 2 AA 2 ILE A 11 CYS A 12 -1 O ILE A 11 N ARG A 8 SHEET 1 AB 8 LEU A 330 ARG A 331 0 SHEET 2 AB 8 ASP A 265 VAL A 270 1 O VAL A 268 N LEU A 330 SHEET 3 AB 8 LEU A 214 THR A 224 1 O ALA A 218 N ASP A 265 SHEET 4 AB 8 VAL A 132 TYR A 137 1 O VAL A 132 N ALA A 215 SHEET 5 AB 8 ARG A 43 ILE A 47 1 O ARG A 43 N ASP A 133 SHEET 6 AB 8 ASP A 68 PHE A 73 1 O ASP A 68 N VAL A 44 SHEET 7 AB 8 ALA A 105 ASN A 109 1 O LYS A 106 N GLY A 71 SHEET 8 AB 8 LEU A 396 GLN A 398 1 O ILE A 397 N ASN A 109 SHEET 1 AC 2 ARG A 143 THR A 145 0 SHEET 2 AC 2 VAL A 152 ASN A 154 -1 O PHE A 153 N ARG A 144 SHEET 1 AD 2 VAL A 164 ASP A 170 0 SHEET 2 AD 2 VAL A 175 LEU A 181 -1 O VAL A 175 N ASP A 170 LINK O THR A 51 NA NA A1404 1555 1555 3.05 LINK N GLY A 54 NA NA A1404 1555 1555 3.09 LINK OG ASER A 138 NA NA A1404 1555 1555 3.05 LINK O1N NAI A1400 NA NA A1404 1555 1555 3.16 LINK O5B NAI A1400 NA NA A1404 1555 1555 3.08 SITE 1 AC1 37 GLY A 48 ALA A 49 SER A 50 THR A 51 SITE 2 AC1 37 GLY A 52 TYR A 53 PHE A 73 PHE A 74 SITE 3 AC1 37 GLU A 75 GLY A 110 ASP A 111 ALA A 112 SITE 4 AC1 37 SER A 138 LEU A 139 ALA A 140 SER A 141 SITE 5 AC1 37 PHE A 223 THR A 224 TYR A 225 LYS A 244 SITE 6 AC1 37 LEU A 271 LYS A 272 ALA A 273 VAL A 274 SITE 7 AC1 37 THR A 276 GLN A 277 ALA A 278 SER A 279 SITE 8 AC1 37 GOL A1402 DMS A1403 NA A1404 HOH A2129 SITE 9 AC1 37 HOH A2130 HOH A2246 HOH A2253 HOH A2256 SITE 10 AC1 37 HOH A2334 SITE 1 AC2 6 ASP A 111 PHE A 113 ARG A 143 ARG A 144 SITE 2 AC2 6 THR A 145 HOH A2503 SITE 1 AC3 7 ALA A 140 SER A 141 PRO A 142 NAI A1400 SITE 2 AC3 7 HOH A2149 HOH A2253 HOH A2256 SITE 1 AC4 8 TYR A 235 ALA A 273 SER A 279 ILE A 282 SITE 2 AC4 8 MET A 285 NAI A1400 HOH A2334 HOH A2370 SITE 1 AC5 5 GLY A 48 THR A 51 GLY A 54 SER A 138 SITE 2 AC5 5 NAI A1400 CRYST1 102.590 102.590 84.990 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009748 0.005628 0.000000 0.00000 SCALE2 0.000000 0.011255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011766 0.00000