data_4BMB
#
_entry.id 4BMB
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.383
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4BMB pdb_00004bmb 10.2210/pdb4bmb/pdb
PDBE EBI-56779 ? ?
WWPDB D_1290056779 ? ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 4BME
_pdbx_database_related.content_type unspecified
_pdbx_database_related.details 'CRYSTAL STRUCTURE OF THE N TERMINAL DOMAIN OF HUMAN GALECTIN 8, F19Y MUTANT'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 4BMB
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.SG_entry .
_pdbx_database_status.recvd_initial_deposition_date 2013-05-07
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Buzamet, E.' 1
'Ruiz, F.M.' 2
'Menendez, M.' 3
'Romero, A.' 4
'Gabius, H.J.' 5
'Solis, D.' 6
#
_citation.id primary
_citation.title
;Natural Single Amino Acid Polymorphism (F19Y) in Human Galectin-8: Detection of Structural Alterations and Increased Growth-Regulatory Activity on Tumor Cells.
;
_citation.journal_abbrev 'FEBS J.'
_citation.journal_volume 281
_citation.page_first 1446
_citation.page_last ?
_citation.year 2014
_citation.journal_id_ASTM ?
_citation.country UK
_citation.journal_id_ISSN 1742-464X
_citation.journal_id_CSD ?
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 24418318
_citation.pdbx_database_id_DOI 10.1111/FEBS.12716
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Ruiz, F.M.' 1 ?
primary 'Scholz, B.A.' 2 ?
primary 'Buzamet, E.' 3 ?
primary 'Kopitz, J.' 4 ?
primary 'Andre, S.' 5 ?
primary 'Menendez, M.' 6 ?
primary 'Romero, A.' 7 ?
primary 'Solis, D.' 8 ?
primary 'Gabius, H.J.' 9 ?
#
_cell.entry_id 4BMB
_cell.length_a 49.516
_cell.length_b 49.516
_cell.length_c 160.476
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 4BMB
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man GALECTIN-8 16992.561 1 ? ? 'N TERMINAL DOMAIN, RESIDUES 4-153' ?
2 branched man 'beta-D-galactopyranose-(1-4)-beta-D-glucopyranose' 342.297 1 ? ? ? ?
3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ?
4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ?
5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ?
6 water nat water 18.015 252 ? ? ? ?
#
loop_
_entity_name_com.entity_id
_entity_name_com.name
1 'GAL-8, PO66 CARBOHYDRATE-BINDING PROTEIN, PO66-CBP, PROSTATE CARCINOMA TUMOR ANTIGEN 1, PCTA-1'
2 beta-lactose
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;SLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLIN
EKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSF
;
_entity_poly.pdbx_seq_one_letter_code_can
;SLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLIN
EKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSF
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 SER n
1 2 LEU n
1 3 ASN n
1 4 ASN n
1 5 LEU n
1 6 GLN n
1 7 ASN n
1 8 ILE n
1 9 ILE n
1 10 TYR n
1 11 ASN n
1 12 PRO n
1 13 VAL n
1 14 ILE n
1 15 PRO n
1 16 PHE n
1 17 VAL n
1 18 GLY n
1 19 THR n
1 20 ILE n
1 21 PRO n
1 22 ASP n
1 23 GLN n
1 24 LEU n
1 25 ASP n
1 26 PRO n
1 27 GLY n
1 28 THR n
1 29 LEU n
1 30 ILE n
1 31 VAL n
1 32 ILE n
1 33 ARG n
1 34 GLY n
1 35 HIS n
1 36 VAL n
1 37 PRO n
1 38 SER n
1 39 ASP n
1 40 ALA n
1 41 ASP n
1 42 ARG n
1 43 PHE n
1 44 GLN n
1 45 VAL n
1 46 ASP n
1 47 LEU n
1 48 GLN n
1 49 ASN n
1 50 GLY n
1 51 SER n
1 52 SER n
1 53 MET n
1 54 LYS n
1 55 PRO n
1 56 ARG n
1 57 ALA n
1 58 ASP n
1 59 VAL n
1 60 ALA n
1 61 PHE n
1 62 HIS n
1 63 PHE n
1 64 ASN n
1 65 PRO n
1 66 ARG n
1 67 PHE n
1 68 LYS n
1 69 ARG n
1 70 ALA n
1 71 GLY n
1 72 CYS n
1 73 ILE n
1 74 VAL n
1 75 CYS n
1 76 ASN n
1 77 THR n
1 78 LEU n
1 79 ILE n
1 80 ASN n
1 81 GLU n
1 82 LYS n
1 83 TRP n
1 84 GLY n
1 85 ARG n
1 86 GLU n
1 87 GLU n
1 88 ILE n
1 89 THR n
1 90 TYR n
1 91 ASP n
1 92 THR n
1 93 PRO n
1 94 PHE n
1 95 LYS n
1 96 ARG n
1 97 GLU n
1 98 LYS n
1 99 SER n
1 100 PHE n
1 101 GLU n
1 102 ILE n
1 103 VAL n
1 104 ILE n
1 105 MET n
1 106 VAL n
1 107 LEU n
1 108 LYS n
1 109 ASP n
1 110 LYS n
1 111 PHE n
1 112 GLN n
1 113 VAL n
1 114 ALA n
1 115 VAL n
1 116 ASN n
1 117 GLY n
1 118 LYS n
1 119 HIS n
1 120 THR n
1 121 LEU n
1 122 LEU n
1 123 TYR n
1 124 GLY n
1 125 HIS n
1 126 ARG n
1 127 ILE n
1 128 GLY n
1 129 PRO n
1 130 GLU n
1 131 LYS n
1 132 ILE n
1 133 ASP n
1 134 THR n
1 135 LEU n
1 136 GLY n
1 137 ILE n
1 138 TYR n
1 139 GLY n
1 140 LYS n
1 141 VAL n
1 142 ASN n
1 143 ILE n
1 144 HIS n
1 145 SER n
1 146 ILE n
1 147 GLY n
1 148 PHE n
1 149 SER n
1 150 PHE n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name HUMAN
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene ?
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code LEG8_HUMAN
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_db_accession O00214
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4BMB
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 150
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession O00214
_struct_ref_seq.db_align_beg 4
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 153
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 4
_struct_ref_seq.pdbx_auth_seq_align_end 153
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409
#
_exptl.entry_id 4BMB
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.74
_exptl_crystal.density_percent_sol 55.2
_exptl_crystal.description NONE
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method ?
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details '20% W/V PEG 4000, 100 MM HEPES SODIUM SALT (PH 7.2) AND 10 MM ZINC CHLORIDE'
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 315r'
_diffrn_detector.pdbx_collection_date 2011-01-29
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.00591
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ESRF BEAMLINE ID23-1'
_diffrn_source.pdbx_synchrotron_site ESRF
_diffrn_source.pdbx_synchrotron_beamline ID23-1
_diffrn_source.pdbx_wavelength 1.00591
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.entry_id 4BMB
_reflns.observed_criterion_sigma_I 1.5
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 47.31
_reflns.d_resolution_high 1.35
_reflns.number_obs 43869
_reflns.number_all ?
_reflns.percent_possible_obs 98.1
_reflns.pdbx_Rmerge_I_obs 0.06
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 22.10
_reflns.B_iso_Wilson_estimate 15.69
_reflns.pdbx_redundancy 7.9
#
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_ordinal 1
_reflns_shell.d_res_high 1.35
_reflns_shell.d_res_low 1.37
_reflns_shell.percent_possible_all 93.4
_reflns_shell.Rmerge_I_obs 1.50
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 1.50
_reflns_shell.pdbx_redundancy 7.9
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 4BMB
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs 43818
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.40
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 26.932
_refine.ls_d_res_high 1.351
_refine.ls_percent_reflns_obs 97.89
_refine.ls_R_factor_obs 0.1595
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.1586
_refine.ls_R_factor_R_free 0.1773
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5.1
_refine.ls_number_reflns_R_free 4152
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean 19.50
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details 'FLAT BULK SOLVENT MODEL'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.11
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.90
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model 'PDB ENTRY 2YV8'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ML
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML 0.14
_refine.pdbx_overall_phase_error 17.33
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1198
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 31
_refine_hist.number_atoms_solvent 252
_refine_hist.number_atoms_total 1481
_refine_hist.d_res_high 1.351
_refine_hist.d_res_low 26.932
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
f_bond_d 0.006 ? ? 1272 'X-RAY DIFFRACTION' ?
f_angle_d 1.168 ? ? 1721 'X-RAY DIFFRACTION' ?
f_dihedral_angle_d 25.424 ? ? 506 'X-RAY DIFFRACTION' ?
f_chiral_restr 0.076 ? ? 195 'X-RAY DIFFRACTION' ?
f_plane_restr 0.005 ? ? 221 'X-RAY DIFFRACTION' ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_all
_refine_ls_shell.R_factor_all
'X-RAY DIFFRACTION' . 1.3511 1.3994 7563 0.3006 95.00 0.3088 . . 385 . .
'X-RAY DIFFRACTION' . 1.3994 1.4554 7715 0.2607 97.00 0.2628 . . 377 . .
'X-RAY DIFFRACTION' . 1.4554 1.5216 7675 0.2305 97.00 0.2393 . . 442 . .
'X-RAY DIFFRACTION' . 1.5216 1.6019 7742 0.1855 98.00 0.2087 . . 402 . .
'X-RAY DIFFRACTION' . 1.6019 1.7022 7722 0.1602 98.00 0.1653 . . 474 . .
'X-RAY DIFFRACTION' . 1.7022 1.8336 7833 0.1492 98.00 0.1823 . . 397 . .
'X-RAY DIFFRACTION' . 1.8336 2.0181 7823 0.1427 99.00 0.1543 . . 399 . .
'X-RAY DIFFRACTION' . 2.0181 2.3100 7874 0.1416 99.00 0.1687 . . 403 . .
'X-RAY DIFFRACTION' . 2.3100 2.9097 7889 0.1542 100.00 0.1736 . . 481 . .
'X-RAY DIFFRACTION' . 2.9097 26.9378 7781 0.1444 98.00 0.1627 . . 392 . .
#
_struct.entry_id 4BMB
_struct.title 'Crystal structure of the N terminal domain of human Galectin 8'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4BMB
_struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN'
_struct_keywords.text 'SUGAR BINDING PROTEIN, CARBOHYDRATE RECOGNITION'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
F N N 6 ?
#
_struct_biol.id 1
#
_struct_conf.conf_type_id HELX_P
_struct_conf.id HELX_P1
_struct_conf.pdbx_PDB_helix_id 1
_struct_conf.beg_label_comp_id GLY
_struct_conf.beg_label_asym_id A
_struct_conf.beg_label_seq_id 128
_struct_conf.pdbx_beg_PDB_ins_code ?
_struct_conf.end_label_comp_id ILE
_struct_conf.end_label_asym_id A
_struct_conf.end_label_seq_id 132
_struct_conf.pdbx_end_PDB_ins_code ?
_struct_conf.beg_auth_comp_id GLY
_struct_conf.beg_auth_asym_id A
_struct_conf.beg_auth_seq_id 131
_struct_conf.end_auth_comp_id ILE
_struct_conf.end_auth_asym_id A
_struct_conf.end_auth_seq_id 135
_struct_conf.pdbx_PDB_helix_class 5
_struct_conf.details ?
_struct_conf.pdbx_PDB_helix_length 5
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? B BGC . O4 ? ? ? 1_555 B GAL . C1 ? ? B BGC 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.403 sing ?
metalc1 metalc ? ? A ASP 22 OD1 ? ? ? 6_545 C ZN . ZN ? ? A ASP 25 A ZN 1154 1_555 ? ? ? ? ? ? ? 1.954 ? ?
metalc2 metalc ? ? A HIS 35 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 38 A ZN 1154 1_555 ? ? ? ? ? ? ? 2.114 ? ?
metalc3 metalc ? ? A ARG 56 NH2 ? ? ? 1_555 D NA . NA ? ? A ARG 59 A NA 1156 1_555 ? ? ? ? ? ? ? 3.056 ? ?
metalc4 metalc ? ? A HIS 144 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 147 A ZN 1154 1_555 ? ? ? ? ? ? ? 2.158 ? ?
metalc5 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 1154 A HOH 2099 1_555 ? ? ? ? ? ? ? 1.732 ? ?
metalc6 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 1154 A HOH 2100 1_555 ? ? ? ? ? ? ? 2.314 ? ?
metalc7 metalc ? ? D NA . NA ? ? ? 1_555 F HOH . O ? ? A NA 1156 A HOH 2248 1_555 ? ? ? ? ? ? ? 2.677 ? ?
metalc8 metalc ? ? D NA . NA ? ? ? 1_555 B GAL . O3 ? ? A NA 1156 B GAL 2 1_555 ? ? ? ? ? ? ? 2.911 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 ILE 14 A . ? ILE 17 A PRO 15 A ? PRO 18 A 1 6.47
2 LYS 54 A . ? LYS 57 A PRO 55 A ? PRO 58 A 1 0.13
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA ? 6 ?
AB ? 6 ?
AC ? 6 ?
AD ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA 1 2 ? anti-parallel
AA 2 3 ? anti-parallel
AA 3 4 ? anti-parallel
AA 4 5 ? anti-parallel
AA 5 6 ? anti-parallel
AB 1 2 ? anti-parallel
AB 2 3 ? anti-parallel
AB 3 4 ? anti-parallel
AB 4 5 ? anti-parallel
AB 5 6 ? anti-parallel
AC 1 2 ? anti-parallel
AC 2 3 ? anti-parallel
AC 3 4 ? anti-parallel
AC 4 5 ? anti-parallel
AC 5 6 ? anti-parallel
AD 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA 1 GLN A 6 ? TYR A 10 ? GLN A 9 TYR A 13
AA 2 ASN A 142 ? SER A 149 ? ASN A 145 SER A 152
AA 3 LEU A 29 ? HIS A 35 ? LEU A 32 HIS A 38
AA 4 SER A 99 ? VAL A 106 ? SER A 102 VAL A 109
AA 5 LYS A 110 ? VAL A 115 ? LYS A 113 VAL A 118
AA 6 LYS A 118 ? GLY A 124 ? LYS A 121 GLY A 127
AB 1 PHE A 16 ? THR A 19 ? PHE A 19 THR A 22
AB 2 THR A 134 ? GLY A 139 ? THR A 137 GLY A 142
AB 3 PHE A 43 ? ASN A 49 ? PHE A 46 ASN A 52
AB 4 ASP A 58 ? ARG A 66 ? ASP A 61 ARG A 69
AB 5 CYS A 72 ? ILE A 79 ? CYS A 75 ILE A 82
AB 6 LYS A 82 ? TRP A 83 ? LYS A 85 TRP A 86
AC 1 PHE A 16 ? THR A 19 ? PHE A 19 THR A 22
AC 2 THR A 134 ? GLY A 139 ? THR A 137 GLY A 142
AC 3 PHE A 43 ? ASN A 49 ? PHE A 46 ASN A 52
AC 4 ASP A 58 ? ARG A 66 ? ASP A 61 ARG A 69
AC 5 CYS A 72 ? ILE A 79 ? CYS A 75 ILE A 82
AC 6 GLU A 87 ? THR A 89 ? GLU A 90 THR A 92
AD 1 LYS A 82 ? TRP A 83 ? LYS A 85 TRP A 86
AD 2 CYS A 72 ? ILE A 79 ? CYS A 75 ILE A 82
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA 1 2 N ILE A 8 ? N ILE A 11 O ILE A 146 ? O ILE A 149
AA 2 3 N SER A 149 ? N SER A 152 O LEU A 29 ? O LEU A 32
AA 3 4 N GLY A 34 ? N GLY A 37 O PHE A 100 ? O PHE A 103
AA 4 5 N MET A 105 ? N MET A 108 O GLN A 112 ? O GLN A 115
AA 5 6 N VAL A 115 ? N VAL A 118 O LYS A 118 ? O LYS A 121
AB 1 2 N GLY A 18 ? N GLY A 21 O LEU A 135 ? O LEU A 138
AB 2 3 N TYR A 138 ? N TYR A 141 O GLN A 44 ? O GLN A 47
AB 3 4 N ASN A 49 ? N ASN A 52 O ASP A 58 ? O ASP A 61
AB 4 5 N ARG A 66 ? N ARG A 69 O CYS A 72 ? O CYS A 75
AB 5 6 N ILE A 79 ? N ILE A 82 O LYS A 82 ? O LYS A 85
AC 1 2 N GLY A 18 ? N GLY A 21 O LEU A 135 ? O LEU A 138
AC 2 3 N TYR A 138 ? N TYR A 141 O GLN A 44 ? O GLN A 47
AC 3 4 N ASN A 49 ? N ASN A 52 O ASP A 58 ? O ASP A 61
AC 4 5 N ARG A 66 ? N ARG A 69 O CYS A 72 ? O CYS A 75
AC 5 6 N CYS A 75 ? N CYS A 78 O GLU A 87 ? O GLU A 90
AD 1 2 N LYS A 82 ? N LYS A 85 O ILE A 79 ? O ILE A 82
#
_database_PDB_matrix.entry_id 4BMB
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 4BMB
_atom_sites.fract_transf_matrix[1][1] 0.020195
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.020195
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.006231
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
NA
O
S
ZN
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 SER 1 4 4 SER SER A . n
A 1 2 LEU 2 5 5 LEU LEU A . n
A 1 3 ASN 3 6 6 ASN ASN A . n
A 1 4 ASN 4 7 7 ASN ASN A . n
A 1 5 LEU 5 8 8 LEU LEU A . n
A 1 6 GLN 6 9 9 GLN GLN A . n
A 1 7 ASN 7 10 10 ASN ASN A . n
A 1 8 ILE 8 11 11 ILE ILE A . n
A 1 9 ILE 9 12 12 ILE ILE A . n
A 1 10 TYR 10 13 13 TYR TYR A . n
A 1 11 ASN 11 14 14 ASN ASN A . n
A 1 12 PRO 12 15 15 PRO PRO A . n
A 1 13 VAL 13 16 16 VAL VAL A . n
A 1 14 ILE 14 17 17 ILE ILE A . n
A 1 15 PRO 15 18 18 PRO PRO A . n
A 1 16 PHE 16 19 19 PHE PHE A . n
A 1 17 VAL 17 20 20 VAL VAL A . n
A 1 18 GLY 18 21 21 GLY GLY A . n
A 1 19 THR 19 22 22 THR THR A . n
A 1 20 ILE 20 23 23 ILE ILE A . n
A 1 21 PRO 21 24 24 PRO PRO A . n
A 1 22 ASP 22 25 25 ASP ASP A . n
A 1 23 GLN 23 26 26 GLN GLN A . n
A 1 24 LEU 24 27 27 LEU LEU A . n
A 1 25 ASP 25 28 28 ASP ASP A . n
A 1 26 PRO 26 29 29 PRO PRO A . n
A 1 27 GLY 27 30 30 GLY GLY A . n
A 1 28 THR 28 31 31 THR THR A . n
A 1 29 LEU 29 32 32 LEU LEU A . n
A 1 30 ILE 30 33 33 ILE ILE A . n
A 1 31 VAL 31 34 34 VAL VAL A . n
A 1 32 ILE 32 35 35 ILE ILE A . n
A 1 33 ARG 33 36 36 ARG ARG A . n
A 1 34 GLY 34 37 37 GLY GLY A . n
A 1 35 HIS 35 38 38 HIS HIS A . n
A 1 36 VAL 36 39 39 VAL VAL A . n
A 1 37 PRO 37 40 40 PRO PRO A . n
A 1 38 SER 38 41 41 SER SER A . n
A 1 39 ASP 39 42 42 ASP ASP A . n
A 1 40 ALA 40 43 43 ALA ALA A . n
A 1 41 ASP 41 44 44 ASP ASP A . n
A 1 42 ARG 42 45 45 ARG ARG A . n
A 1 43 PHE 43 46 46 PHE PHE A . n
A 1 44 GLN 44 47 47 GLN GLN A . n
A 1 45 VAL 45 48 48 VAL VAL A . n
A 1 46 ASP 46 49 49 ASP ASP A . n
A 1 47 LEU 47 50 50 LEU LEU A . n
A 1 48 GLN 48 51 51 GLN GLN A . n
A 1 49 ASN 49 52 52 ASN ASN A . n
A 1 50 GLY 50 53 53 GLY GLY A . n
A 1 51 SER 51 54 54 SER SER A . n
A 1 52 SER 52 55 55 SER SER A . n
A 1 53 MET 53 56 56 MET MET A . n
A 1 54 LYS 54 57 57 LYS LYS A . n
A 1 55 PRO 55 58 58 PRO PRO A . n
A 1 56 ARG 56 59 59 ARG ARG A . n
A 1 57 ALA 57 60 60 ALA ALA A . n
A 1 58 ASP 58 61 61 ASP ASP A . n
A 1 59 VAL 59 62 62 VAL VAL A . n
A 1 60 ALA 60 63 63 ALA ALA A . n
A 1 61 PHE 61 64 64 PHE PHE A . n
A 1 62 HIS 62 65 65 HIS HIS A . n
A 1 63 PHE 63 66 66 PHE PHE A . n
A 1 64 ASN 64 67 67 ASN ASN A . n
A 1 65 PRO 65 68 68 PRO PRO A . n
A 1 66 ARG 66 69 69 ARG ARG A . n
A 1 67 PHE 67 70 70 PHE PHE A . n
A 1 68 LYS 68 71 71 LYS LYS A . n
A 1 69 ARG 69 72 72 ARG ARG A . n
A 1 70 ALA 70 73 73 ALA ALA A . n
A 1 71 GLY 71 74 74 GLY GLY A . n
A 1 72 CYS 72 75 75 CYS CYS A . n
A 1 73 ILE 73 76 76 ILE ILE A . n
A 1 74 VAL 74 77 77 VAL VAL A . n
A 1 75 CYS 75 78 78 CYS CYS A . n
A 1 76 ASN 76 79 79 ASN ASN A . n
A 1 77 THR 77 80 80 THR THR A . n
A 1 78 LEU 78 81 81 LEU LEU A . n
A 1 79 ILE 79 82 82 ILE ILE A . n
A 1 80 ASN 80 83 83 ASN ASN A . n
A 1 81 GLU 81 84 84 GLU GLU A . n
A 1 82 LYS 82 85 85 LYS LYS A . n
A 1 83 TRP 83 86 86 TRP TRP A . n
A 1 84 GLY 84 87 87 GLY GLY A . n
A 1 85 ARG 85 88 88 ARG ARG A . n
A 1 86 GLU 86 89 89 GLU GLU A . n
A 1 87 GLU 87 90 90 GLU GLU A . n
A 1 88 ILE 88 91 91 ILE ILE A . n
A 1 89 THR 89 92 92 THR THR A . n
A 1 90 TYR 90 93 93 TYR TYR A . n
A 1 91 ASP 91 94 94 ASP ASP A . n
A 1 92 THR 92 95 95 THR THR A . n
A 1 93 PRO 93 96 96 PRO PRO A . n
A 1 94 PHE 94 97 97 PHE PHE A . n
A 1 95 LYS 95 98 98 LYS LYS A . n
A 1 96 ARG 96 99 99 ARG ARG A . n
A 1 97 GLU 97 100 100 GLU GLU A . n
A 1 98 LYS 98 101 101 LYS LYS A . n
A 1 99 SER 99 102 102 SER SER A . n
A 1 100 PHE 100 103 103 PHE PHE A . n
A 1 101 GLU 101 104 104 GLU GLU A . n
A 1 102 ILE 102 105 105 ILE ILE A . n
A 1 103 VAL 103 106 106 VAL VAL A . n
A 1 104 ILE 104 107 107 ILE ILE A . n
A 1 105 MET 105 108 108 MET MET A . n
A 1 106 VAL 106 109 109 VAL VAL A . n
A 1 107 LEU 107 110 110 LEU LEU A . n
A 1 108 LYS 108 111 111 LYS LYS A . n
A 1 109 ASP 109 112 112 ASP ASP A . n
A 1 110 LYS 110 113 113 LYS LYS A . n
A 1 111 PHE 111 114 114 PHE PHE A . n
A 1 112 GLN 112 115 115 GLN GLN A . n
A 1 113 VAL 113 116 116 VAL VAL A . n
A 1 114 ALA 114 117 117 ALA ALA A . n
A 1 115 VAL 115 118 118 VAL VAL A . n
A 1 116 ASN 116 119 119 ASN ASN A . n
A 1 117 GLY 117 120 120 GLY GLY A . n
A 1 118 LYS 118 121 121 LYS LYS A . n
A 1 119 HIS 119 122 122 HIS HIS A . n
A 1 120 THR 120 123 123 THR THR A . n
A 1 121 LEU 121 124 124 LEU LEU A . n
A 1 122 LEU 122 125 125 LEU LEU A . n
A 1 123 TYR 123 126 126 TYR TYR A . n
A 1 124 GLY 124 127 127 GLY GLY A . n
A 1 125 HIS 125 128 128 HIS HIS A . n
A 1 126 ARG 126 129 129 ARG ARG A . n
A 1 127 ILE 127 130 130 ILE ILE A . n
A 1 128 GLY 128 131 131 GLY GLY A . n
A 1 129 PRO 129 132 132 PRO PRO A . n
A 1 130 GLU 130 133 133 GLU GLU A . n
A 1 131 LYS 131 134 134 LYS LYS A . n
A 1 132 ILE 132 135 135 ILE ILE A . n
A 1 133 ASP 133 136 136 ASP ASP A . n
A 1 134 THR 134 137 137 THR THR A . n
A 1 135 LEU 135 138 138 LEU LEU A . n
A 1 136 GLY 136 139 139 GLY GLY A . n
A 1 137 ILE 137 140 140 ILE ILE A . n
A 1 138 TYR 138 141 141 TYR TYR A . n
A 1 139 GLY 139 142 142 GLY GLY A . n
A 1 140 LYS 140 143 143 LYS LYS A . n
A 1 141 VAL 141 144 144 VAL VAL A . n
A 1 142 ASN 142 145 145 ASN ASN A . n
A 1 143 ILE 143 146 146 ILE ILE A . n
A 1 144 HIS 144 147 147 HIS HIS A . n
A 1 145 SER 145 148 148 SER SER A . n
A 1 146 ILE 146 149 149 ILE ILE A . n
A 1 147 GLY 147 150 150 GLY GLY A . n
A 1 148 PHE 148 151 151 PHE PHE A . n
A 1 149 SER 149 152 152 SER SER A . n
A 1 150 PHE 150 153 153 PHE PHE A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN 1 1154 1154 ZN ZN A .
D 4 NA 1 1156 1156 NA NA A .
E 5 GOL 1 1157 1157 GOL GOL A .
F 6 HOH 1 2001 2001 HOH HOH A .
F 6 HOH 2 2002 2002 HOH HOH A .
F 6 HOH 3 2003 2003 HOH HOH A .
F 6 HOH 4 2004 2004 HOH HOH A .
F 6 HOH 5 2005 2005 HOH HOH A .
F 6 HOH 6 2006 2006 HOH HOH A .
F 6 HOH 7 2007 2007 HOH HOH A .
F 6 HOH 8 2008 2008 HOH HOH A .
F 6 HOH 9 2009 2009 HOH HOH A .
F 6 HOH 10 2010 2010 HOH HOH A .
F 6 HOH 11 2011 2011 HOH HOH A .
F 6 HOH 12 2012 2012 HOH HOH A .
F 6 HOH 13 2013 2013 HOH HOH A .
F 6 HOH 14 2014 2014 HOH HOH A .
F 6 HOH 15 2015 2015 HOH HOH A .
F 6 HOH 16 2016 2016 HOH HOH A .
F 6 HOH 17 2017 2017 HOH HOH A .
F 6 HOH 18 2018 2018 HOH HOH A .
F 6 HOH 19 2019 2019 HOH HOH A .
F 6 HOH 20 2020 2020 HOH HOH A .
F 6 HOH 21 2021 2021 HOH HOH A .
F 6 HOH 22 2022 2022 HOH HOH A .
F 6 HOH 23 2023 2023 HOH HOH A .
F 6 HOH 24 2024 2024 HOH HOH A .
F 6 HOH 25 2025 2025 HOH HOH A .
F 6 HOH 26 2026 2026 HOH HOH A .
F 6 HOH 27 2027 2027 HOH HOH A .
F 6 HOH 28 2028 2028 HOH HOH A .
F 6 HOH 29 2029 2029 HOH HOH A .
F 6 HOH 30 2030 2030 HOH HOH A .
F 6 HOH 31 2031 2031 HOH HOH A .
F 6 HOH 32 2032 2032 HOH HOH A .
F 6 HOH 33 2033 2033 HOH HOH A .
F 6 HOH 34 2034 2034 HOH HOH A .
F 6 HOH 35 2035 2035 HOH HOH A .
F 6 HOH 36 2036 2036 HOH HOH A .
F 6 HOH 37 2037 2037 HOH HOH A .
F 6 HOH 38 2038 2038 HOH HOH A .
F 6 HOH 39 2039 2039 HOH HOH A .
F 6 HOH 40 2040 2040 HOH HOH A .
F 6 HOH 41 2041 2041 HOH HOH A .
F 6 HOH 42 2042 2042 HOH HOH A .
F 6 HOH 43 2043 2043 HOH HOH A .
F 6 HOH 44 2044 2044 HOH HOH A .
F 6 HOH 45 2045 2045 HOH HOH A .
F 6 HOH 46 2046 2046 HOH HOH A .
F 6 HOH 47 2047 2047 HOH HOH A .
F 6 HOH 48 2048 2048 HOH HOH A .
F 6 HOH 49 2049 2049 HOH HOH A .
F 6 HOH 50 2050 2050 HOH HOH A .
F 6 HOH 51 2051 2051 HOH HOH A .
F 6 HOH 52 2052 2052 HOH HOH A .
F 6 HOH 53 2053 2053 HOH HOH A .
F 6 HOH 54 2054 2054 HOH HOH A .
F 6 HOH 55 2055 2055 HOH HOH A .
F 6 HOH 56 2056 2056 HOH HOH A .
F 6 HOH 57 2057 2057 HOH HOH A .
F 6 HOH 58 2058 2058 HOH HOH A .
F 6 HOH 59 2059 2059 HOH HOH A .
F 6 HOH 60 2060 2060 HOH HOH A .
F 6 HOH 61 2061 2061 HOH HOH A .
F 6 HOH 62 2062 2062 HOH HOH A .
F 6 HOH 63 2063 2063 HOH HOH A .
F 6 HOH 64 2064 2064 HOH HOH A .
F 6 HOH 65 2065 2065 HOH HOH A .
F 6 HOH 66 2066 2066 HOH HOH A .
F 6 HOH 67 2067 2067 HOH HOH A .
F 6 HOH 68 2068 2068 HOH HOH A .
F 6 HOH 69 2069 2069 HOH HOH A .
F 6 HOH 70 2070 2070 HOH HOH A .
F 6 HOH 71 2071 2071 HOH HOH A .
F 6 HOH 72 2072 2072 HOH HOH A .
F 6 HOH 73 2073 2073 HOH HOH A .
F 6 HOH 74 2074 2074 HOH HOH A .
F 6 HOH 75 2075 2075 HOH HOH A .
F 6 HOH 76 2076 2076 HOH HOH A .
F 6 HOH 77 2077 2077 HOH HOH A .
F 6 HOH 78 2078 2078 HOH HOH A .
F 6 HOH 79 2079 2079 HOH HOH A .
F 6 HOH 80 2080 2080 HOH HOH A .
F 6 HOH 81 2081 2081 HOH HOH A .
F 6 HOH 82 2082 2082 HOH HOH A .
F 6 HOH 83 2083 2083 HOH HOH A .
F 6 HOH 84 2084 2084 HOH HOH A .
F 6 HOH 85 2085 2085 HOH HOH A .
F 6 HOH 86 2086 2086 HOH HOH A .
F 6 HOH 87 2087 2087 HOH HOH A .
F 6 HOH 88 2088 2088 HOH HOH A .
F 6 HOH 89 2089 2089 HOH HOH A .
F 6 HOH 90 2090 2090 HOH HOH A .
F 6 HOH 91 2091 2091 HOH HOH A .
F 6 HOH 92 2092 2092 HOH HOH A .
F 6 HOH 93 2093 2093 HOH HOH A .
F 6 HOH 94 2094 2094 HOH HOH A .
F 6 HOH 95 2095 2095 HOH HOH A .
F 6 HOH 96 2096 2096 HOH HOH A .
F 6 HOH 97 2097 2097 HOH HOH A .
F 6 HOH 98 2098 2098 HOH HOH A .
F 6 HOH 99 2099 2099 HOH HOH A .
F 6 HOH 100 2100 2100 HOH HOH A .
F 6 HOH 101 2101 2101 HOH HOH A .
F 6 HOH 102 2102 2102 HOH HOH A .
F 6 HOH 103 2103 2103 HOH HOH A .
F 6 HOH 104 2104 2104 HOH HOH A .
F 6 HOH 105 2105 2105 HOH HOH A .
F 6 HOH 106 2106 2106 HOH HOH A .
F 6 HOH 107 2107 2107 HOH HOH A .
F 6 HOH 108 2108 2108 HOH HOH A .
F 6 HOH 109 2109 2109 HOH HOH A .
F 6 HOH 110 2110 2110 HOH HOH A .
F 6 HOH 111 2111 2111 HOH HOH A .
F 6 HOH 112 2112 2112 HOH HOH A .
F 6 HOH 113 2113 2113 HOH HOH A .
F 6 HOH 114 2114 2114 HOH HOH A .
F 6 HOH 115 2115 2115 HOH HOH A .
F 6 HOH 116 2116 2116 HOH HOH A .
F 6 HOH 117 2117 2117 HOH HOH A .
F 6 HOH 118 2118 2118 HOH HOH A .
F 6 HOH 119 2119 2119 HOH HOH A .
F 6 HOH 120 2120 2120 HOH HOH A .
F 6 HOH 121 2121 2121 HOH HOH A .
F 6 HOH 122 2122 2122 HOH HOH A .
F 6 HOH 123 2123 2123 HOH HOH A .
F 6 HOH 124 2124 2124 HOH HOH A .
F 6 HOH 125 2125 2125 HOH HOH A .
F 6 HOH 126 2126 2126 HOH HOH A .
F 6 HOH 127 2127 2127 HOH HOH A .
F 6 HOH 128 2128 2128 HOH HOH A .
F 6 HOH 129 2129 2129 HOH HOH A .
F 6 HOH 130 2130 2130 HOH HOH A .
F 6 HOH 131 2131 2131 HOH HOH A .
F 6 HOH 132 2132 2132 HOH HOH A .
F 6 HOH 133 2133 2133 HOH HOH A .
F 6 HOH 134 2134 2134 HOH HOH A .
F 6 HOH 135 2135 2135 HOH HOH A .
F 6 HOH 136 2136 2136 HOH HOH A .
F 6 HOH 137 2137 2137 HOH HOH A .
F 6 HOH 138 2138 2138 HOH HOH A .
F 6 HOH 139 2139 2139 HOH HOH A .
F 6 HOH 140 2140 2140 HOH HOH A .
F 6 HOH 141 2141 2141 HOH HOH A .
F 6 HOH 142 2142 2142 HOH HOH A .
F 6 HOH 143 2143 2143 HOH HOH A .
F 6 HOH 144 2144 2144 HOH HOH A .
F 6 HOH 145 2145 2145 HOH HOH A .
F 6 HOH 146 2146 2146 HOH HOH A .
F 6 HOH 147 2147 2147 HOH HOH A .
F 6 HOH 148 2148 2148 HOH HOH A .
F 6 HOH 149 2149 2149 HOH HOH A .
F 6 HOH 150 2150 2150 HOH HOH A .
F 6 HOH 151 2151 2151 HOH HOH A .
F 6 HOH 152 2152 2152 HOH HOH A .
F 6 HOH 153 2153 2153 HOH HOH A .
F 6 HOH 154 2154 2154 HOH HOH A .
F 6 HOH 155 2155 2155 HOH HOH A .
F 6 HOH 156 2156 2156 HOH HOH A .
F 6 HOH 157 2157 2157 HOH HOH A .
F 6 HOH 158 2158 2158 HOH HOH A .
F 6 HOH 159 2159 2159 HOH HOH A .
F 6 HOH 160 2160 2160 HOH HOH A .
F 6 HOH 161 2161 2161 HOH HOH A .
F 6 HOH 162 2162 2162 HOH HOH A .
F 6 HOH 163 2163 2163 HOH HOH A .
F 6 HOH 164 2164 2164 HOH HOH A .
F 6 HOH 165 2165 2165 HOH HOH A .
F 6 HOH 166 2166 2166 HOH HOH A .
F 6 HOH 167 2167 2167 HOH HOH A .
F 6 HOH 168 2168 2168 HOH HOH A .
F 6 HOH 169 2169 2169 HOH HOH A .
F 6 HOH 170 2170 2170 HOH HOH A .
F 6 HOH 171 2171 2171 HOH HOH A .
F 6 HOH 172 2172 2172 HOH HOH A .
F 6 HOH 173 2173 2173 HOH HOH A .
F 6 HOH 174 2174 2174 HOH HOH A .
F 6 HOH 175 2175 2175 HOH HOH A .
F 6 HOH 176 2176 2176 HOH HOH A .
F 6 HOH 177 2177 2177 HOH HOH A .
F 6 HOH 178 2178 2178 HOH HOH A .
F 6 HOH 179 2179 2179 HOH HOH A .
F 6 HOH 180 2180 2180 HOH HOH A .
F 6 HOH 181 2181 2181 HOH HOH A .
F 6 HOH 182 2182 2182 HOH HOH A .
F 6 HOH 183 2183 2183 HOH HOH A .
F 6 HOH 184 2184 2184 HOH HOH A .
F 6 HOH 185 2185 2185 HOH HOH A .
F 6 HOH 186 2186 2186 HOH HOH A .
F 6 HOH 187 2187 2187 HOH HOH A .
F 6 HOH 188 2188 2188 HOH HOH A .
F 6 HOH 189 2189 2189 HOH HOH A .
F 6 HOH 190 2190 2190 HOH HOH A .
F 6 HOH 191 2191 2191 HOH HOH A .
F 6 HOH 192 2192 2192 HOH HOH A .
F 6 HOH 193 2193 2193 HOH HOH A .
F 6 HOH 194 2194 2194 HOH HOH A .
F 6 HOH 195 2195 2195 HOH HOH A .
F 6 HOH 196 2196 2196 HOH HOH A .
F 6 HOH 197 2197 2197 HOH HOH A .
F 6 HOH 198 2198 2198 HOH HOH A .
F 6 HOH 199 2199 2199 HOH HOH A .
F 6 HOH 200 2200 2200 HOH HOH A .
F 6 HOH 201 2201 2201 HOH HOH A .
F 6 HOH 202 2202 2202 HOH HOH A .
F 6 HOH 203 2203 2203 HOH HOH A .
F 6 HOH 204 2204 2204 HOH HOH A .
F 6 HOH 205 2205 2205 HOH HOH A .
F 6 HOH 206 2206 2206 HOH HOH A .
F 6 HOH 207 2207 2207 HOH HOH A .
F 6 HOH 208 2208 2208 HOH HOH A .
F 6 HOH 209 2209 2209 HOH HOH A .
F 6 HOH 210 2210 2210 HOH HOH A .
F 6 HOH 211 2211 2211 HOH HOH A .
F 6 HOH 212 2212 2212 HOH HOH A .
F 6 HOH 213 2213 2213 HOH HOH A .
F 6 HOH 214 2214 2214 HOH HOH A .
F 6 HOH 215 2215 2215 HOH HOH A .
F 6 HOH 216 2216 2216 HOH HOH A .
F 6 HOH 217 2217 2217 HOH HOH A .
F 6 HOH 218 2218 2218 HOH HOH A .
F 6 HOH 219 2219 2219 HOH HOH A .
F 6 HOH 220 2220 2220 HOH HOH A .
F 6 HOH 221 2221 2221 HOH HOH A .
F 6 HOH 222 2222 2222 HOH HOH A .
F 6 HOH 223 2223 2223 HOH HOH A .
F 6 HOH 224 2224 2224 HOH HOH A .
F 6 HOH 225 2225 2225 HOH HOH A .
F 6 HOH 226 2226 2226 HOH HOH A .
F 6 HOH 227 2227 2227 HOH HOH A .
F 6 HOH 228 2228 2228 HOH HOH A .
F 6 HOH 229 2229 2229 HOH HOH A .
F 6 HOH 230 2230 2230 HOH HOH A .
F 6 HOH 231 2231 2231 HOH HOH A .
F 6 HOH 232 2232 2232 HOH HOH A .
F 6 HOH 233 2233 2233 HOH HOH A .
F 6 HOH 234 2234 2234 HOH HOH A .
F 6 HOH 235 2235 2235 HOH HOH A .
F 6 HOH 236 2236 2236 HOH HOH A .
F 6 HOH 237 2237 2237 HOH HOH A .
F 6 HOH 238 2238 2238 HOH HOH A .
F 6 HOH 239 2239 2239 HOH HOH A .
F 6 HOH 240 2240 2240 HOH HOH A .
F 6 HOH 241 2241 2241 HOH HOH A .
F 6 HOH 242 2242 2242 HOH HOH A .
F 6 HOH 243 2243 2243 HOH HOH A .
F 6 HOH 244 2244 2244 HOH HOH A .
F 6 HOH 245 2245 2245 HOH HOH A .
F 6 HOH 246 2246 2246 HOH HOH A .
F 6 HOH 247 2247 2247 HOH HOH A .
F 6 HOH 248 2248 2248 HOH HOH A .
F 6 HOH 249 2249 2249 HOH HOH A .
F 6 HOH 250 2250 2250 HOH HOH A .
F 6 HOH 251 2251 2251 HOH HOH A .
F 6 HOH 252 2252 2252 HOH HOH A .
#
_pdbx_molecule_features.prd_id PRD_900004
_pdbx_molecule_features.name beta-lactose
_pdbx_molecule_features.type Oligosaccharide
_pdbx_molecule_features.class Nutrient
_pdbx_molecule_features.details oligosaccharide
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_900004
_pdbx_molecule.asym_id B
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 2098
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id F
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 OD1 ? A ASP 22 ? A ASP 25 ? 6_545 ZN ? C ZN . ? A ZN 1154 ? 1_555 ND1 ? A HIS 35 ? A HIS 38 ? 1_555 133.4 ?
2 OD1 ? A ASP 22 ? A ASP 25 ? 6_545 ZN ? C ZN . ? A ZN 1154 ? 1_555 NE2 ? A HIS 144 ? A HIS 147 ? 1_555 98.0 ?
3 ND1 ? A HIS 35 ? A HIS 38 ? 1_555 ZN ? C ZN . ? A ZN 1154 ? 1_555 NE2 ? A HIS 144 ? A HIS 147 ? 1_555 125.3 ?
4 OD1 ? A ASP 22 ? A ASP 25 ? 6_545 ZN ? C ZN . ? A ZN 1154 ? 1_555 O ? F HOH . ? A HOH 2099 ? 1_555 87.1 ?
5 ND1 ? A HIS 35 ? A HIS 38 ? 1_555 ZN ? C ZN . ? A ZN 1154 ? 1_555 O ? F HOH . ? A HOH 2099 ? 1_555 111.0 ?
6 NE2 ? A HIS 144 ? A HIS 147 ? 1_555 ZN ? C ZN . ? A ZN 1154 ? 1_555 O ? F HOH . ? A HOH 2099 ? 1_555 84.5 ?
7 OD1 ? A ASP 22 ? A ASP 25 ? 6_545 ZN ? C ZN . ? A ZN 1154 ? 1_555 O ? F HOH . ? A HOH 2100 ? 1_555 151.2 ?
8 ND1 ? A HIS 35 ? A HIS 38 ? 1_555 ZN ? C ZN . ? A ZN 1154 ? 1_555 O ? F HOH . ? A HOH 2100 ? 1_555 72.4 ?
9 NE2 ? A HIS 144 ? A HIS 147 ? 1_555 ZN ? C ZN . ? A ZN 1154 ? 1_555 O ? F HOH . ? A HOH 2100 ? 1_555 65.1 ?
10 O ? F HOH . ? A HOH 2099 ? 1_555 ZN ? C ZN . ? A ZN 1154 ? 1_555 O ? F HOH . ? A HOH 2100 ? 1_555 68.8 ?
11 NH2 ? A ARG 56 ? A ARG 59 ? 1_555 NA ? D NA . ? A NA 1156 ? 1_555 O ? F HOH . ? A HOH 2248 ? 1_555 99.4 ?
12 NH2 ? A ARG 56 ? A ARG 59 ? 1_555 NA ? D NA . ? A NA 1156 ? 1_555 O3 ? B GAL . ? B GAL 2 ? 1_555 153.2 ?
13 O ? F HOH . ? A HOH 2248 ? 1_555 NA ? D NA . ? A NA 1156 ? 1_555 O3 ? B GAL . ? B GAL 2 ? 1_555 95.4 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2014-03-19
2 'Structure model' 2 0 2020-07-29
3 'Structure model' 2 1 2023-12-20
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Atomic model'
2 2 'Structure model' 'Data collection'
3 2 'Structure model' 'Derived calculations'
4 2 'Structure model' 'Non-polymer description'
5 2 'Structure model' Other
6 2 'Structure model' 'Structure summary'
7 3 'Structure model' 'Data collection'
8 3 'Structure model' 'Database references'
9 3 'Structure model' 'Refinement description'
10 3 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' atom_site
2 2 'Structure model' chem_comp
3 2 'Structure model' entity
4 2 'Structure model' entity_name_com
5 2 'Structure model' pdbx_branch_scheme
6 2 'Structure model' pdbx_chem_comp_identifier
7 2 'Structure model' pdbx_database_status
8 2 'Structure model' pdbx_entity_branch
9 2 'Structure model' pdbx_entity_branch_descriptor
10 2 'Structure model' pdbx_entity_branch_link
11 2 'Structure model' pdbx_entity_branch_list
12 2 'Structure model' pdbx_entity_nonpoly
13 2 'Structure model' pdbx_molecule_features
14 2 'Structure model' pdbx_nonpoly_scheme
15 2 'Structure model' pdbx_struct_conn_angle
16 2 'Structure model' struct_conn
17 2 'Structure model' struct_conn_type
18 2 'Structure model' struct_site
19 2 'Structure model' struct_site_gen
20 3 'Structure model' chem_comp
21 3 'Structure model' chem_comp_atom
22 3 'Structure model' chem_comp_bond
23 3 'Structure model' database_2
24 3 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_atom_site.B_iso_or_equiv'
2 2 'Structure model' '_atom_site.Cartn_x'
3 2 'Structure model' '_atom_site.Cartn_y'
4 2 'Structure model' '_atom_site.Cartn_z'
5 2 'Structure model' '_atom_site.auth_asym_id'
6 2 'Structure model' '_atom_site.auth_atom_id'
7 2 'Structure model' '_atom_site.auth_comp_id'
8 2 'Structure model' '_atom_site.auth_seq_id'
9 2 'Structure model' '_atom_site.label_asym_id'
10 2 'Structure model' '_atom_site.label_atom_id'
11 2 'Structure model' '_atom_site.label_comp_id'
12 2 'Structure model' '_atom_site.label_entity_id'
13 2 'Structure model' '_atom_site.occupancy'
14 2 'Structure model' '_atom_site.type_symbol'
15 2 'Structure model' '_chem_comp.formula'
16 2 'Structure model' '_chem_comp.formula_weight'
17 2 'Structure model' '_chem_comp.id'
18 2 'Structure model' '_chem_comp.mon_nstd_flag'
19 2 'Structure model' '_chem_comp.name'
20 2 'Structure model' '_chem_comp.pdbx_synonyms'
21 2 'Structure model' '_chem_comp.type'
22 2 'Structure model' '_entity.formula_weight'
23 2 'Structure model' '_entity.pdbx_description'
24 2 'Structure model' '_entity.src_method'
25 2 'Structure model' '_entity.type'
26 2 'Structure model' '_pdbx_database_status.status_code_sf'
27 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
28 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
29 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
30 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
31 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
32 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
33 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry'
34 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
35 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
36 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
37 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
38 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
39 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
40 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
41 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
42 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry'
43 2 'Structure model' '_pdbx_struct_conn_angle.value'
44 3 'Structure model' '_chem_comp.pdbx_synonyms'
45 3 'Structure model' '_database_2.pdbx_DOI'
46 3 'Structure model' '_database_2.pdbx_database_accession'
#
loop_
_pdbx_refine_tls.pdbx_refine_id
_pdbx_refine_tls.id
_pdbx_refine_tls.details
_pdbx_refine_tls.method
_pdbx_refine_tls.origin_x
_pdbx_refine_tls.origin_y
_pdbx_refine_tls.origin_z
_pdbx_refine_tls.T[1][1]
_pdbx_refine_tls.T[2][2]
_pdbx_refine_tls.T[3][3]
_pdbx_refine_tls.T[1][2]
_pdbx_refine_tls.T[1][3]
_pdbx_refine_tls.T[2][3]
_pdbx_refine_tls.L[1][1]
_pdbx_refine_tls.L[2][2]
_pdbx_refine_tls.L[3][3]
_pdbx_refine_tls.L[1][2]
_pdbx_refine_tls.L[1][3]
_pdbx_refine_tls.L[2][3]
_pdbx_refine_tls.S[1][1]
_pdbx_refine_tls.S[1][2]
_pdbx_refine_tls.S[1][3]
_pdbx_refine_tls.S[2][1]
_pdbx_refine_tls.S[2][2]
_pdbx_refine_tls.S[2][3]
_pdbx_refine_tls.S[3][1]
_pdbx_refine_tls.S[3][2]
_pdbx_refine_tls.S[3][3]
'X-RAY DIFFRACTION' 1 ? refined 10.6616 -14.4761 21.5068 0.1534 0.1896 0.1788 0.0211 -0.0296 0.0277 2.2681 5.2598 3.0254 1.5193
1.3357 2.3463 -0.0939 -0.1885 0.1524 0.0285 -0.0493 0.1313 -0.1634 -0.1032 0.1284
'X-RAY DIFFRACTION' 2 ? refined 6.2765 -12.2796 7.5774 0.0633 0.0923 0.0951 -0.0012 0.0032 0.0127 1.5959 1.2450 1.5333 -0.1447
0.5468 -0.2535 -0.0107 0.0680 -0.0016 -0.0761 -0.0102 -0.1309 0.0654 0.1353 0.0035
#
loop_
_pdbx_refine_tls_group.pdbx_refine_id
_pdbx_refine_tls_group.id
_pdbx_refine_tls_group.refine_tls_id
_pdbx_refine_tls_group.beg_auth_asym_id
_pdbx_refine_tls_group.beg_auth_seq_id
_pdbx_refine_tls_group.beg_label_asym_id
_pdbx_refine_tls_group.beg_label_seq_id
_pdbx_refine_tls_group.end_auth_asym_id
_pdbx_refine_tls_group.end_auth_seq_id
_pdbx_refine_tls_group.end_label_asym_id
_pdbx_refine_tls_group.end_label_seq_id
_pdbx_refine_tls_group.selection
_pdbx_refine_tls_group.selection_details
'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 4:18)'
'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 19:153)'
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
PHENIX refinement '(PHENIX.REFINE)' ? 1
XDS 'data reduction' . ? 2
Aimless 'data scaling' . ? 3
PHENIX phasing . ? 4
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 O A HOH 2056 ? ? O A HOH 2060 ? ? 2.12
2 1 O A HOH 2095 ? ? O A HOH 2208 ? ? 2.17
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id ARG
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 72
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi 51.71
_pdbx_validate_torsion.psi -125.95
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
BGC C2 C N R 74
BGC C3 C N S 75
BGC C4 C N S 76
BGC C5 C N R 77
BGC C6 C N N 78
BGC C1 C N R 79
BGC O1 O N N 80
BGC O2 O N N 81
BGC O3 O N N 82
BGC O4 O N N 83
BGC O5 O N N 84
BGC O6 O N N 85
BGC H2 H N N 86
BGC H3 H N N 87
BGC H4 H N N 88
BGC H5 H N N 89
BGC H61 H N N 90
BGC H62 H N N 91
BGC H1 H N N 92
BGC HO1 H N N 93
BGC HO2 H N N 94
BGC HO3 H N N 95
BGC HO4 H N N 96
BGC HO6 H N N 97
CYS N N N N 98
CYS CA C N R 99
CYS C C N N 100
CYS O O N N 101
CYS CB C N N 102
CYS SG S N N 103
CYS OXT O N N 104
CYS H H N N 105
CYS H2 H N N 106
CYS HA H N N 107
CYS HB2 H N N 108
CYS HB3 H N N 109
CYS HG H N N 110
CYS HXT H N N 111
GAL C1 C N R 112
GAL C2 C N R 113
GAL C3 C N S 114
GAL C4 C N R 115
GAL C5 C N R 116
GAL C6 C N N 117
GAL O1 O N N 118
GAL O2 O N N 119
GAL O3 O N N 120
GAL O4 O N N 121
GAL O5 O N N 122
GAL O6 O N N 123
GAL H1 H N N 124
GAL H2 H N N 125
GAL H3 H N N 126
GAL H4 H N N 127
GAL H5 H N N 128
GAL H61 H N N 129
GAL H62 H N N 130
GAL HO1 H N N 131
GAL HO2 H N N 132
GAL HO3 H N N 133
GAL HO4 H N N 134
GAL HO6 H N N 135
GLN N N N N 136
GLN CA C N S 137
GLN C C N N 138
GLN O O N N 139
GLN CB C N N 140
GLN CG C N N 141
GLN CD C N N 142
GLN OE1 O N N 143
GLN NE2 N N N 144
GLN OXT O N N 145
GLN H H N N 146
GLN H2 H N N 147
GLN HA H N N 148
GLN HB2 H N N 149
GLN HB3 H N N 150
GLN HG2 H N N 151
GLN HG3 H N N 152
GLN HE21 H N N 153
GLN HE22 H N N 154
GLN HXT H N N 155
GLU N N N N 156
GLU CA C N S 157
GLU C C N N 158
GLU O O N N 159
GLU CB C N N 160
GLU CG C N N 161
GLU CD C N N 162
GLU OE1 O N N 163
GLU OE2 O N N 164
GLU OXT O N N 165
GLU H H N N 166
GLU H2 H N N 167
GLU HA H N N 168
GLU HB2 H N N 169
GLU HB3 H N N 170
GLU HG2 H N N 171
GLU HG3 H N N 172
GLU HE2 H N N 173
GLU HXT H N N 174
GLY N N N N 175
GLY CA C N N 176
GLY C C N N 177
GLY O O N N 178
GLY OXT O N N 179
GLY H H N N 180
GLY H2 H N N 181
GLY HA2 H N N 182
GLY HA3 H N N 183
GLY HXT H N N 184
GOL C1 C N N 185
GOL O1 O N N 186
GOL C2 C N N 187
GOL O2 O N N 188
GOL C3 C N N 189
GOL O3 O N N 190
GOL H11 H N N 191
GOL H12 H N N 192
GOL HO1 H N N 193
GOL H2 H N N 194
GOL HO2 H N N 195
GOL H31 H N N 196
GOL H32 H N N 197
GOL HO3 H N N 198
HIS N N N N 199
HIS CA C N S 200
HIS C C N N 201
HIS O O N N 202
HIS CB C N N 203
HIS CG C Y N 204
HIS ND1 N Y N 205
HIS CD2 C Y N 206
HIS CE1 C Y N 207
HIS NE2 N Y N 208
HIS OXT O N N 209
HIS H H N N 210
HIS H2 H N N 211
HIS HA H N N 212
HIS HB2 H N N 213
HIS HB3 H N N 214
HIS HD1 H N N 215
HIS HD2 H N N 216
HIS HE1 H N N 217
HIS HE2 H N N 218
HIS HXT H N N 219
HOH O O N N 220
HOH H1 H N N 221
HOH H2 H N N 222
ILE N N N N 223
ILE CA C N S 224
ILE C C N N 225
ILE O O N N 226
ILE CB C N S 227
ILE CG1 C N N 228
ILE CG2 C N N 229
ILE CD1 C N N 230
ILE OXT O N N 231
ILE H H N N 232
ILE H2 H N N 233
ILE HA H N N 234
ILE HB H N N 235
ILE HG12 H N N 236
ILE HG13 H N N 237
ILE HG21 H N N 238
ILE HG22 H N N 239
ILE HG23 H N N 240
ILE HD11 H N N 241
ILE HD12 H N N 242
ILE HD13 H N N 243
ILE HXT H N N 244
LEU N N N N 245
LEU CA C N S 246
LEU C C N N 247
LEU O O N N 248
LEU CB C N N 249
LEU CG C N N 250
LEU CD1 C N N 251
LEU CD2 C N N 252
LEU OXT O N N 253
LEU H H N N 254
LEU H2 H N N 255
LEU HA H N N 256
LEU HB2 H N N 257
LEU HB3 H N N 258
LEU HG H N N 259
LEU HD11 H N N 260
LEU HD12 H N N 261
LEU HD13 H N N 262
LEU HD21 H N N 263
LEU HD22 H N N 264
LEU HD23 H N N 265
LEU HXT H N N 266
LYS N N N N 267
LYS CA C N S 268
LYS C C N N 269
LYS O O N N 270
LYS CB C N N 271
LYS CG C N N 272
LYS CD C N N 273
LYS CE C N N 274
LYS NZ N N N 275
LYS OXT O N N 276
LYS H H N N 277
LYS H2 H N N 278
LYS HA H N N 279
LYS HB2 H N N 280
LYS HB3 H N N 281
LYS HG2 H N N 282
LYS HG3 H N N 283
LYS HD2 H N N 284
LYS HD3 H N N 285
LYS HE2 H N N 286
LYS HE3 H N N 287
LYS HZ1 H N N 288
LYS HZ2 H N N 289
LYS HZ3 H N N 290
LYS HXT H N N 291
MET N N N N 292
MET CA C N S 293
MET C C N N 294
MET O O N N 295
MET CB C N N 296
MET CG C N N 297
MET SD S N N 298
MET CE C N N 299
MET OXT O N N 300
MET H H N N 301
MET H2 H N N 302
MET HA H N N 303
MET HB2 H N N 304
MET HB3 H N N 305
MET HG2 H N N 306
MET HG3 H N N 307
MET HE1 H N N 308
MET HE2 H N N 309
MET HE3 H N N 310
MET HXT H N N 311
NA NA NA N N 312
PHE N N N N 313
PHE CA C N S 314
PHE C C N N 315
PHE O O N N 316
PHE CB C N N 317
PHE CG C Y N 318
PHE CD1 C Y N 319
PHE CD2 C Y N 320
PHE CE1 C Y N 321
PHE CE2 C Y N 322
PHE CZ C Y N 323
PHE OXT O N N 324
PHE H H N N 325
PHE H2 H N N 326
PHE HA H N N 327
PHE HB2 H N N 328
PHE HB3 H N N 329
PHE HD1 H N N 330
PHE HD2 H N N 331
PHE HE1 H N N 332
PHE HE2 H N N 333
PHE HZ H N N 334
PHE HXT H N N 335
PRO N N N N 336
PRO CA C N S 337
PRO C C N N 338
PRO O O N N 339
PRO CB C N N 340
PRO CG C N N 341
PRO CD C N N 342
PRO OXT O N N 343
PRO H H N N 344
PRO HA H N N 345
PRO HB2 H N N 346
PRO HB3 H N N 347
PRO HG2 H N N 348
PRO HG3 H N N 349
PRO HD2 H N N 350
PRO HD3 H N N 351
PRO HXT H N N 352
SER N N N N 353
SER CA C N S 354
SER C C N N 355
SER O O N N 356
SER CB C N N 357
SER OG O N N 358
SER OXT O N N 359
SER H H N N 360
SER H2 H N N 361
SER HA H N N 362
SER HB2 H N N 363
SER HB3 H N N 364
SER HG H N N 365
SER HXT H N N 366
THR N N N N 367
THR CA C N S 368
THR C C N N 369
THR O O N N 370
THR CB C N R 371
THR OG1 O N N 372
THR CG2 C N N 373
THR OXT O N N 374
THR H H N N 375
THR H2 H N N 376
THR HA H N N 377
THR HB H N N 378
THR HG1 H N N 379
THR HG21 H N N 380
THR HG22 H N N 381
THR HG23 H N N 382
THR HXT H N N 383
TRP N N N N 384
TRP CA C N S 385
TRP C C N N 386
TRP O O N N 387
TRP CB C N N 388
TRP CG C Y N 389
TRP CD1 C Y N 390
TRP CD2 C Y N 391
TRP NE1 N Y N 392
TRP CE2 C Y N 393
TRP CE3 C Y N 394
TRP CZ2 C Y N 395
TRP CZ3 C Y N 396
TRP CH2 C Y N 397
TRP OXT O N N 398
TRP H H N N 399
TRP H2 H N N 400
TRP HA H N N 401
TRP HB2 H N N 402
TRP HB3 H N N 403
TRP HD1 H N N 404
TRP HE1 H N N 405
TRP HE3 H N N 406
TRP HZ2 H N N 407
TRP HZ3 H N N 408
TRP HH2 H N N 409
TRP HXT H N N 410
TYR N N N N 411
TYR CA C N S 412
TYR C C N N 413
TYR O O N N 414
TYR CB C N N 415
TYR CG C Y N 416
TYR CD1 C Y N 417
TYR CD2 C Y N 418
TYR CE1 C Y N 419
TYR CE2 C Y N 420
TYR CZ C Y N 421
TYR OH O N N 422
TYR OXT O N N 423
TYR H H N N 424
TYR H2 H N N 425
TYR HA H N N 426
TYR HB2 H N N 427
TYR HB3 H N N 428
TYR HD1 H N N 429
TYR HD2 H N N 430
TYR HE1 H N N 431
TYR HE2 H N N 432
TYR HH H N N 433
TYR HXT H N N 434
VAL N N N N 435
VAL CA C N S 436
VAL C C N N 437
VAL O O N N 438
VAL CB C N N 439
VAL CG1 C N N 440
VAL CG2 C N N 441
VAL OXT O N N 442
VAL H H N N 443
VAL H2 H N N 444
VAL HA H N N 445
VAL HB H N N 446
VAL HG11 H N N 447
VAL HG12 H N N 448
VAL HG13 H N N 449
VAL HG21 H N N 450
VAL HG22 H N N 451
VAL HG23 H N N 452
VAL HXT H N N 453
ZN ZN ZN N N 454
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
BGC C2 C3 sing N N 70
BGC C2 C1 sing N N 71
BGC C2 O2 sing N N 72
BGC C2 H2 sing N N 73
BGC C3 C4 sing N N 74
BGC C3 O3 sing N N 75
BGC C3 H3 sing N N 76
BGC C4 C5 sing N N 77
BGC C4 O4 sing N N 78
BGC C4 H4 sing N N 79
BGC C5 C6 sing N N 80
BGC C5 O5 sing N N 81
BGC C5 H5 sing N N 82
BGC C6 O6 sing N N 83
BGC C6 H61 sing N N 84
BGC C6 H62 sing N N 85
BGC C1 O1 sing N N 86
BGC C1 O5 sing N N 87
BGC C1 H1 sing N N 88
BGC O1 HO1 sing N N 89
BGC O2 HO2 sing N N 90
BGC O3 HO3 sing N N 91
BGC O4 HO4 sing N N 92
BGC O6 HO6 sing N N 93
CYS N CA sing N N 94
CYS N H sing N N 95
CYS N H2 sing N N 96
CYS CA C sing N N 97
CYS CA CB sing N N 98
CYS CA HA sing N N 99
CYS C O doub N N 100
CYS C OXT sing N N 101
CYS CB SG sing N N 102
CYS CB HB2 sing N N 103
CYS CB HB3 sing N N 104
CYS SG HG sing N N 105
CYS OXT HXT sing N N 106
GAL C1 C2 sing N N 107
GAL C1 O1 sing N N 108
GAL C1 O5 sing N N 109
GAL C1 H1 sing N N 110
GAL C2 C3 sing N N 111
GAL C2 O2 sing N N 112
GAL C2 H2 sing N N 113
GAL C3 C4 sing N N 114
GAL C3 O3 sing N N 115
GAL C3 H3 sing N N 116
GAL C4 C5 sing N N 117
GAL C4 O4 sing N N 118
GAL C4 H4 sing N N 119
GAL C5 C6 sing N N 120
GAL C5 O5 sing N N 121
GAL C5 H5 sing N N 122
GAL C6 O6 sing N N 123
GAL C6 H61 sing N N 124
GAL C6 H62 sing N N 125
GAL O1 HO1 sing N N 126
GAL O2 HO2 sing N N 127
GAL O3 HO3 sing N N 128
GAL O4 HO4 sing N N 129
GAL O6 HO6 sing N N 130
GLN N CA sing N N 131
GLN N H sing N N 132
GLN N H2 sing N N 133
GLN CA C sing N N 134
GLN CA CB sing N N 135
GLN CA HA sing N N 136
GLN C O doub N N 137
GLN C OXT sing N N 138
GLN CB CG sing N N 139
GLN CB HB2 sing N N 140
GLN CB HB3 sing N N 141
GLN CG CD sing N N 142
GLN CG HG2 sing N N 143
GLN CG HG3 sing N N 144
GLN CD OE1 doub N N 145
GLN CD NE2 sing N N 146
GLN NE2 HE21 sing N N 147
GLN NE2 HE22 sing N N 148
GLN OXT HXT sing N N 149
GLU N CA sing N N 150
GLU N H sing N N 151
GLU N H2 sing N N 152
GLU CA C sing N N 153
GLU CA CB sing N N 154
GLU CA HA sing N N 155
GLU C O doub N N 156
GLU C OXT sing N N 157
GLU CB CG sing N N 158
GLU CB HB2 sing N N 159
GLU CB HB3 sing N N 160
GLU CG CD sing N N 161
GLU CG HG2 sing N N 162
GLU CG HG3 sing N N 163
GLU CD OE1 doub N N 164
GLU CD OE2 sing N N 165
GLU OE2 HE2 sing N N 166
GLU OXT HXT sing N N 167
GLY N CA sing N N 168
GLY N H sing N N 169
GLY N H2 sing N N 170
GLY CA C sing N N 171
GLY CA HA2 sing N N 172
GLY CA HA3 sing N N 173
GLY C O doub N N 174
GLY C OXT sing N N 175
GLY OXT HXT sing N N 176
GOL C1 O1 sing N N 177
GOL C1 C2 sing N N 178
GOL C1 H11 sing N N 179
GOL C1 H12 sing N N 180
GOL O1 HO1 sing N N 181
GOL C2 O2 sing N N 182
GOL C2 C3 sing N N 183
GOL C2 H2 sing N N 184
GOL O2 HO2 sing N N 185
GOL C3 O3 sing N N 186
GOL C3 H31 sing N N 187
GOL C3 H32 sing N N 188
GOL O3 HO3 sing N N 189
HIS N CA sing N N 190
HIS N H sing N N 191
HIS N H2 sing N N 192
HIS CA C sing N N 193
HIS CA CB sing N N 194
HIS CA HA sing N N 195
HIS C O doub N N 196
HIS C OXT sing N N 197
HIS CB CG sing N N 198
HIS CB HB2 sing N N 199
HIS CB HB3 sing N N 200
HIS CG ND1 sing Y N 201
HIS CG CD2 doub Y N 202
HIS ND1 CE1 doub Y N 203
HIS ND1 HD1 sing N N 204
HIS CD2 NE2 sing Y N 205
HIS CD2 HD2 sing N N 206
HIS CE1 NE2 sing Y N 207
HIS CE1 HE1 sing N N 208
HIS NE2 HE2 sing N N 209
HIS OXT HXT sing N N 210
HOH O H1 sing N N 211
HOH O H2 sing N N 212
ILE N CA sing N N 213
ILE N H sing N N 214
ILE N H2 sing N N 215
ILE CA C sing N N 216
ILE CA CB sing N N 217
ILE CA HA sing N N 218
ILE C O doub N N 219
ILE C OXT sing N N 220
ILE CB CG1 sing N N 221
ILE CB CG2 sing N N 222
ILE CB HB sing N N 223
ILE CG1 CD1 sing N N 224
ILE CG1 HG12 sing N N 225
ILE CG1 HG13 sing N N 226
ILE CG2 HG21 sing N N 227
ILE CG2 HG22 sing N N 228
ILE CG2 HG23 sing N N 229
ILE CD1 HD11 sing N N 230
ILE CD1 HD12 sing N N 231
ILE CD1 HD13 sing N N 232
ILE OXT HXT sing N N 233
LEU N CA sing N N 234
LEU N H sing N N 235
LEU N H2 sing N N 236
LEU CA C sing N N 237
LEU CA CB sing N N 238
LEU CA HA sing N N 239
LEU C O doub N N 240
LEU C OXT sing N N 241
LEU CB CG sing N N 242
LEU CB HB2 sing N N 243
LEU CB HB3 sing N N 244
LEU CG CD1 sing N N 245
LEU CG CD2 sing N N 246
LEU CG HG sing N N 247
LEU CD1 HD11 sing N N 248
LEU CD1 HD12 sing N N 249
LEU CD1 HD13 sing N N 250
LEU CD2 HD21 sing N N 251
LEU CD2 HD22 sing N N 252
LEU CD2 HD23 sing N N 253
LEU OXT HXT sing N N 254
LYS N CA sing N N 255
LYS N H sing N N 256
LYS N H2 sing N N 257
LYS CA C sing N N 258
LYS CA CB sing N N 259
LYS CA HA sing N N 260
LYS C O doub N N 261
LYS C OXT sing N N 262
LYS CB CG sing N N 263
LYS CB HB2 sing N N 264
LYS CB HB3 sing N N 265
LYS CG CD sing N N 266
LYS CG HG2 sing N N 267
LYS CG HG3 sing N N 268
LYS CD CE sing N N 269
LYS CD HD2 sing N N 270
LYS CD HD3 sing N N 271
LYS CE NZ sing N N 272
LYS CE HE2 sing N N 273
LYS CE HE3 sing N N 274
LYS NZ HZ1 sing N N 275
LYS NZ HZ2 sing N N 276
LYS NZ HZ3 sing N N 277
LYS OXT HXT sing N N 278
MET N CA sing N N 279
MET N H sing N N 280
MET N H2 sing N N 281
MET CA C sing N N 282
MET CA CB sing N N 283
MET CA HA sing N N 284
MET C O doub N N 285
MET C OXT sing N N 286
MET CB CG sing N N 287
MET CB HB2 sing N N 288
MET CB HB3 sing N N 289
MET CG SD sing N N 290
MET CG HG2 sing N N 291
MET CG HG3 sing N N 292
MET SD CE sing N N 293
MET CE HE1 sing N N 294
MET CE HE2 sing N N 295
MET CE HE3 sing N N 296
MET OXT HXT sing N N 297
PHE N CA sing N N 298
PHE N H sing N N 299
PHE N H2 sing N N 300
PHE CA C sing N N 301
PHE CA CB sing N N 302
PHE CA HA sing N N 303
PHE C O doub N N 304
PHE C OXT sing N N 305
PHE CB CG sing N N 306
PHE CB HB2 sing N N 307
PHE CB HB3 sing N N 308
PHE CG CD1 doub Y N 309
PHE CG CD2 sing Y N 310
PHE CD1 CE1 sing Y N 311
PHE CD1 HD1 sing N N 312
PHE CD2 CE2 doub Y N 313
PHE CD2 HD2 sing N N 314
PHE CE1 CZ doub Y N 315
PHE CE1 HE1 sing N N 316
PHE CE2 CZ sing Y N 317
PHE CE2 HE2 sing N N 318
PHE CZ HZ sing N N 319
PHE OXT HXT sing N N 320
PRO N CA sing N N 321
PRO N CD sing N N 322
PRO N H sing N N 323
PRO CA C sing N N 324
PRO CA CB sing N N 325
PRO CA HA sing N N 326
PRO C O doub N N 327
PRO C OXT sing N N 328
PRO CB CG sing N N 329
PRO CB HB2 sing N N 330
PRO CB HB3 sing N N 331
PRO CG CD sing N N 332
PRO CG HG2 sing N N 333
PRO CG HG3 sing N N 334
PRO CD HD2 sing N N 335
PRO CD HD3 sing N N 336
PRO OXT HXT sing N N 337
SER N CA sing N N 338
SER N H sing N N 339
SER N H2 sing N N 340
SER CA C sing N N 341
SER CA CB sing N N 342
SER CA HA sing N N 343
SER C O doub N N 344
SER C OXT sing N N 345
SER CB OG sing N N 346
SER CB HB2 sing N N 347
SER CB HB3 sing N N 348
SER OG HG sing N N 349
SER OXT HXT sing N N 350
THR N CA sing N N 351
THR N H sing N N 352
THR N H2 sing N N 353
THR CA C sing N N 354
THR CA CB sing N N 355
THR CA HA sing N N 356
THR C O doub N N 357
THR C OXT sing N N 358
THR CB OG1 sing N N 359
THR CB CG2 sing N N 360
THR CB HB sing N N 361
THR OG1 HG1 sing N N 362
THR CG2 HG21 sing N N 363
THR CG2 HG22 sing N N 364
THR CG2 HG23 sing N N 365
THR OXT HXT sing N N 366
TRP N CA sing N N 367
TRP N H sing N N 368
TRP N H2 sing N N 369
TRP CA C sing N N 370
TRP CA CB sing N N 371
TRP CA HA sing N N 372
TRP C O doub N N 373
TRP C OXT sing N N 374
TRP CB CG sing N N 375
TRP CB HB2 sing N N 376
TRP CB HB3 sing N N 377
TRP CG CD1 doub Y N 378
TRP CG CD2 sing Y N 379
TRP CD1 NE1 sing Y N 380
TRP CD1 HD1 sing N N 381
TRP CD2 CE2 doub Y N 382
TRP CD2 CE3 sing Y N 383
TRP NE1 CE2 sing Y N 384
TRP NE1 HE1 sing N N 385
TRP CE2 CZ2 sing Y N 386
TRP CE3 CZ3 doub Y N 387
TRP CE3 HE3 sing N N 388
TRP CZ2 CH2 doub Y N 389
TRP CZ2 HZ2 sing N N 390
TRP CZ3 CH2 sing Y N 391
TRP CZ3 HZ3 sing N N 392
TRP CH2 HH2 sing N N 393
TRP OXT HXT sing N N 394
TYR N CA sing N N 395
TYR N H sing N N 396
TYR N H2 sing N N 397
TYR CA C sing N N 398
TYR CA CB sing N N 399
TYR CA HA sing N N 400
TYR C O doub N N 401
TYR C OXT sing N N 402
TYR CB CG sing N N 403
TYR CB HB2 sing N N 404
TYR CB HB3 sing N N 405
TYR CG CD1 doub Y N 406
TYR CG CD2 sing Y N 407
TYR CD1 CE1 sing Y N 408
TYR CD1 HD1 sing N N 409
TYR CD2 CE2 doub Y N 410
TYR CD2 HD2 sing N N 411
TYR CE1 CZ doub Y N 412
TYR CE1 HE1 sing N N 413
TYR CE2 CZ sing Y N 414
TYR CE2 HE2 sing N N 415
TYR CZ OH sing N N 416
TYR OH HH sing N N 417
TYR OXT HXT sing N N 418
VAL N CA sing N N 419
VAL N H sing N N 420
VAL N H2 sing N N 421
VAL CA C sing N N 422
VAL CA CB sing N N 423
VAL CA HA sing N N 424
VAL C O doub N N 425
VAL C OXT sing N N 426
VAL CB CG1 sing N N 427
VAL CB CG2 sing N N 428
VAL CB HB sing N N 429
VAL CG1 HG11 sing N N 430
VAL CG1 HG12 sing N N 431
VAL CG1 HG13 sing N N 432
VAL CG2 HG21 sing N N 433
VAL CG2 HG22 sing N N 434
VAL CG2 HG23 sing N N 435
VAL OXT HXT sing N N 436
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 BGC 1 B BGC 1 A LAT 1155 n
B 2 GAL 2 B GAL 2 A LAT 1155 n
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb
BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose
BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp
BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc
GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb
GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose
GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp
GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DGalpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0
3 2 '[][b-D-Glcp]{[(4+1)][b-D-Galp]{}}' LINUCS PDB-CARE ?
#
_pdbx_entity_branch_link.link_id 1
_pdbx_entity_branch_link.entity_id 2
_pdbx_entity_branch_link.entity_branch_list_num_1 2
_pdbx_entity_branch_link.comp_id_1 GAL
_pdbx_entity_branch_link.atom_id_1 C1
_pdbx_entity_branch_link.leaving_atom_id_1 O1
_pdbx_entity_branch_link.entity_branch_list_num_2 1
_pdbx_entity_branch_link.comp_id_2 BGC
_pdbx_entity_branch_link.atom_id_2 O4
_pdbx_entity_branch_link.leaving_atom_id_2 HO4
_pdbx_entity_branch_link.value_order sing
_pdbx_entity_branch_link.details ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 BGC 1 n
2 GAL 2 n
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 'ZINC ION' ZN
4 'SODIUM ION' NA
5 GLYCEROL GOL
6 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 2YV8
_pdbx_initial_refinement_model.details 'PDB ENTRY 2YV8'
#