data_4BMD # _entry.id 4BMD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4BMD pdb_00004bmd 10.2210/pdb4bmd/pdb PDBE EBI-56784 ? ? WWPDB D_1290056784 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4BMC _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF S.POMBE RAD4 BRCT1,2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4BMD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-05-07 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Meng, Q.' 1 'Rappas, M.' 2 'Wardlaw, C.P.' 3 'Garcia, V.' 4 'Carr, A.M.' 5 'Oliver, A.W.' 6 'Du, L.L.' 7 'Pearl, L.H.' 8 # _citation.id primary _citation.title 'Phosphorylation-Dependent Assembly and Coordination of the DNA Damage Checkpoint Apparatus by Rad4(Topbp1.).' _citation.journal_abbrev Mol.Cell _citation.journal_volume 51 _citation.page_first 723 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24074952 _citation.pdbx_database_id_DOI 10.1016/J.MOLCEL.2013.08.030 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qu, M.' 1 ? primary 'Rappas, M.' 2 ? primary 'Wardlaw, C.P.' 3 ? primary 'Garcia, V.' 4 ? primary 'Ren, J.Y.' 5 ? primary 'Day, M.' 6 ? primary 'Carr, A.M.' 7 ? primary 'Oliver, A.W.' 8 ? primary 'Du, L.L.' 9 ? primary 'Pearl, L.H.' 10 ? # _cell.entry_id 4BMD _cell.length_a 93.030 _cell.length_b 93.030 _cell.length_c 75.390 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BMD _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'S-M CHECKPOINT CONTROL PROTEIN RAD4' 23738.248 1 ? ? 'BRCT3 AND BRCT4 DOMAINS, RESIDUES 291-494' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 195.237 1 ? ? ? ? 4 water nat water 18.015 144 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RAD4, P74, PROTEIN CUT5' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DTELNIENEAKLFKNLTFYLYEFPNTKVSRLHKCLSDNGGQISEFLSSTIDFVVIPHYFPVDELPIFSFPTVNEWWIERC LYYKKIFGIDEHALAKPFFRPSLVPYFNGLSIHLTGFKGEELSHLKKALTILGAVVHEFLGVQRSILLVNTNEPFSMKTR FKIQHATEWNVRVVGVAWLWNIIQSGKFIDQVSPWAIDKKENQE ; _entity_poly.pdbx_seq_one_letter_code_can ;DTELNIENEAKLFKNLTFYLYEFPNTKVSRLHKCLSDNGGQISEFLSSTIDFVVIPHYFPVDELPIFSFPTVNEWWIERC LYYKKIFGIDEHALAKPFFRPSLVPYFNGLSIHLTGFKGEELSHLKKALTILGAVVHEFLGVQRSILLVNTNEPFSMKTR FKIQHATEWNVRVVGVAWLWNIIQSGKFIDQVSPWAIDKKENQE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 THR n 1 3 GLU n 1 4 LEU n 1 5 ASN n 1 6 ILE n 1 7 GLU n 1 8 ASN n 1 9 GLU n 1 10 ALA n 1 11 LYS n 1 12 LEU n 1 13 PHE n 1 14 LYS n 1 15 ASN n 1 16 LEU n 1 17 THR n 1 18 PHE n 1 19 TYR n 1 20 LEU n 1 21 TYR n 1 22 GLU n 1 23 PHE n 1 24 PRO n 1 25 ASN n 1 26 THR n 1 27 LYS n 1 28 VAL n 1 29 SER n 1 30 ARG n 1 31 LEU n 1 32 HIS n 1 33 LYS n 1 34 CYS n 1 35 LEU n 1 36 SER n 1 37 ASP n 1 38 ASN n 1 39 GLY n 1 40 GLY n 1 41 GLN n 1 42 ILE n 1 43 SER n 1 44 GLU n 1 45 PHE n 1 46 LEU n 1 47 SER n 1 48 SER n 1 49 THR n 1 50 ILE n 1 51 ASP n 1 52 PHE n 1 53 VAL n 1 54 VAL n 1 55 ILE n 1 56 PRO n 1 57 HIS n 1 58 TYR n 1 59 PHE n 1 60 PRO n 1 61 VAL n 1 62 ASP n 1 63 GLU n 1 64 LEU n 1 65 PRO n 1 66 ILE n 1 67 PHE n 1 68 SER n 1 69 PHE n 1 70 PRO n 1 71 THR n 1 72 VAL n 1 73 ASN n 1 74 GLU n 1 75 TRP n 1 76 TRP n 1 77 ILE n 1 78 GLU n 1 79 ARG n 1 80 CYS n 1 81 LEU n 1 82 TYR n 1 83 TYR n 1 84 LYS n 1 85 LYS n 1 86 ILE n 1 87 PHE n 1 88 GLY n 1 89 ILE n 1 90 ASP n 1 91 GLU n 1 92 HIS n 1 93 ALA n 1 94 LEU n 1 95 ALA n 1 96 LYS n 1 97 PRO n 1 98 PHE n 1 99 PHE n 1 100 ARG n 1 101 PRO n 1 102 SER n 1 103 LEU n 1 104 VAL n 1 105 PRO n 1 106 TYR n 1 107 PHE n 1 108 ASN n 1 109 GLY n 1 110 LEU n 1 111 SER n 1 112 ILE n 1 113 HIS n 1 114 LEU n 1 115 THR n 1 116 GLY n 1 117 PHE n 1 118 LYS n 1 119 GLY n 1 120 GLU n 1 121 GLU n 1 122 LEU n 1 123 SER n 1 124 HIS n 1 125 LEU n 1 126 LYS n 1 127 LYS n 1 128 ALA n 1 129 LEU n 1 130 THR n 1 131 ILE n 1 132 LEU n 1 133 GLY n 1 134 ALA n 1 135 VAL n 1 136 VAL n 1 137 HIS n 1 138 GLU n 1 139 PHE n 1 140 LEU n 1 141 GLY n 1 142 VAL n 1 143 GLN n 1 144 ARG n 1 145 SER n 1 146 ILE n 1 147 LEU n 1 148 LEU n 1 149 VAL n 1 150 ASN n 1 151 THR n 1 152 ASN n 1 153 GLU n 1 154 PRO n 1 155 PHE n 1 156 SER n 1 157 MET n 1 158 LYS n 1 159 THR n 1 160 ARG n 1 161 PHE n 1 162 LYS n 1 163 ILE n 1 164 GLN n 1 165 HIS n 1 166 ALA n 1 167 THR n 1 168 GLU n 1 169 TRP n 1 170 ASN n 1 171 VAL n 1 172 ARG n 1 173 VAL n 1 174 VAL n 1 175 GLY n 1 176 VAL n 1 177 ALA n 1 178 TRP n 1 179 LEU n 1 180 TRP n 1 181 ASN n 1 182 ILE n 1 183 ILE n 1 184 GLN n 1 185 SER n 1 186 GLY n 1 187 LYS n 1 188 PHE n 1 189 ILE n 1 190 ASP n 1 191 GLN n 1 192 VAL n 1 193 SER n 1 194 PRO n 1 195 TRP n 1 196 ALA n 1 197 ILE n 1 198 ASP n 1 199 LYS n 1 200 LYS n 1 201 GLU n 1 202 ASN n 1 203 GLN n 1 204 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'FISSION YEAST' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SCHIZOSACCHAROMYCES POMBE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4896 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ROSETTA2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET-28B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAD4_SCHPO _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P32372 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4BMD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 204 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32372 _struct_ref_seq.db_align_beg 291 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 494 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 291 _struct_ref_seq.pdbx_auth_seq_align_end 494 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MES non-polymer . '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' ? 'C6 H13 N O4 S' 195.237 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4BMD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.97 _exptl_crystal.density_percent_sol 69.00 _exptl_crystal.description 'BALBES SELECTED PDB ENTRY 2XNH AS THE BEST STARTING MODEL.' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M MES PH 6.5, 0.2 M NACL, 20% PEG 6000' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9173 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength 0.9173 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4BMD _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 55.05 _reflns.d_resolution_high 2.50 _reflns.number_obs 13128 _reflns.number_all ? _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.13 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 5.20 _reflns.B_iso_Wilson_estimate 41.25 _reflns.pdbx_redundancy 4.46 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.64 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.78 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 0.85 _reflns_shell.pdbx_redundancy 4.79 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4BMD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13109 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.80 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 55.048 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs 96.39 _refine.ls_R_factor_obs 0.1859 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1842 _refine.ls_R_factor_R_free 0.2183 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1202 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.1990 _refine.aniso_B[2][2] 0.1990 _refine.aniso_B[3][3] -0.3980 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.371 _refine.solvent_model_param_bsol 57.732 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2XNH' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.36 _refine.pdbx_overall_phase_error 21.16 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1541 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 1698 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 55.048 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.002 ? ? 1669 'X-RAY DIFFRACTION' ? f_angle_d 0.667 ? ? 2285 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 9.301 ? ? 617 'X-RAY DIFFRACTION' ? f_chiral_restr 0.043 ? ? 248 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 284 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.5004 2.6005 2635 0.3065 99.00 0.3282 . . 159 . . 'X-RAY DIFFRACTION' . 2.6005 2.7189 2626 0.2635 99.00 0.2901 . . 134 . . 'X-RAY DIFFRACTION' . 2.7189 2.8622 2519 0.2114 93.00 0.2558 . . 121 . . 'X-RAY DIFFRACTION' . 2.8622 3.0416 2648 0.2014 99.00 0.2557 . . 112 . . 'X-RAY DIFFRACTION' . 3.0416 3.2764 2650 0.1927 99.00 0.2615 . . 147 . . 'X-RAY DIFFRACTION' . 3.2764 3.6060 2683 0.1716 100.00 0.1875 . . 114 . . 'X-RAY DIFFRACTION' . 3.6060 4.1277 2535 0.1531 96.00 0.2069 . . 143 . . 'X-RAY DIFFRACTION' . 4.1277 5.1998 2502 0.1497 94.00 0.1655 . . 140 . . 'X-RAY DIFFRACTION' . 5.1998 55.0612 2327 0.1846 88.00 0.2098 . . 132 . . # _struct.entry_id 4BMD _struct.title 'Crystal structure of S.pombe Rad4 BRCT3,4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4BMD _struct_keywords.pdbx_keywords REPLICATION _struct_keywords.text 'REPLICATION, TOPBP1, BRCT, DNA DAMAGE CHECKPOINT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 24 ? ASP A 37 ? PRO A 314 ASP A 327 1 ? 14 HELX_P HELX_P2 2 PRO A 60 ? LEU A 64 ? PRO A 350 LEU A 354 5 ? 5 HELX_P HELX_P3 3 GLU A 74 ? TYR A 83 ? GLU A 364 TYR A 373 1 ? 10 HELX_P HELX_P4 4 HIS A 92 ? LYS A 96 ? HIS A 382 LYS A 386 5 ? 5 HELX_P HELX_P5 5 ARG A 100 ? SER A 102 ? ARG A 390 SER A 392 5 ? 3 HELX_P HELX_P6 6 LEU A 103 ? ASN A 108 ? LEU A 393 ASN A 398 1 ? 6 HELX_P HELX_P7 7 LYS A 118 ? LEU A 132 ? LYS A 408 LEU A 422 1 ? 15 HELX_P HELX_P8 8 SER A 156 ? TRP A 169 ? SER A 446 TRP A 459 1 ? 14 HELX_P HELX_P9 9 VAL A 176 ? GLY A 186 ? VAL A 466 GLY A 476 1 ? 11 HELX_P HELX_P10 10 VAL A 192 ? TRP A 195 ? VAL A 482 TRP A 485 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AB 1 2 ? parallel AB 2 3 ? parallel AB 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLN A 41 ? ILE A 42 ? GLN A 331 ILE A 332 AA 2 THR A 17 ? LEU A 20 ? THR A 307 LEU A 310 AA 3 PHE A 52 ? ILE A 55 ? PHE A 342 ILE A 345 AA 4 THR A 71 ? ASN A 73 ? THR A 361 ASN A 363 AB 1 VAL A 135 ? HIS A 137 ? VAL A 425 HIS A 427 AB 2 SER A 111 ? THR A 115 ? SER A 401 THR A 405 AB 3 ILE A 146 ? VAL A 149 ? ILE A 436 VAL A 439 AB 4 ARG A 172 ? GLY A 175 ? ARG A 462 GLY A 465 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 O GLN A 41 ? O GLN A 331 N PHE A 18 ? N PHE A 308 AA 2 3 N TYR A 19 ? N TYR A 309 O PHE A 52 ? O PHE A 342 AA 3 4 N ILE A 55 ? N ILE A 345 O VAL A 72 ? O VAL A 362 AB 1 2 N HIS A 137 ? N HIS A 427 O ILE A 112 ? O ILE A 402 AB 2 3 N HIS A 113 ? N HIS A 403 O ILE A 146 ? O ILE A 436 AB 3 4 N LEU A 147 ? N LEU A 437 O ARG A 172 ? O ARG A 462 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 1489 ? 3 'BINDING SITE FOR RESIDUE CL A 1489' AC2 Software A MES 3001 ? 8 'BINDING SITE FOR RESIDUE MES A 3001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 137 ? HIS A 427 . ? 1_555 ? 2 AC1 3 PHE A 139 ? PHE A 429 . ? 1_555 ? 3 AC1 3 ARG A 144 ? ARG A 434 . ? 1_555 ? 4 AC2 8 GLU A 91 ? GLU A 381 . ? 1_555 ? 5 AC2 8 HIS A 92 ? HIS A 382 . ? 1_555 ? 6 AC2 8 ALA A 93 ? ALA A 383 . ? 1_555 ? 7 AC2 8 ARG A 144 ? ARG A 434 . ? 2_565 ? 8 AC2 8 ASN A 152 ? ASN A 442 . ? 1_555 ? 9 AC2 8 ALA A 177 ? ALA A 467 . ? 1_555 ? 10 AC2 8 TRP A 180 ? TRP A 470 . ? 1_555 ? 11 AC2 8 HOH D . ? HOH A 2135 . ? 1_555 ? # _database_PDB_matrix.entry_id 4BMD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4BMD _atom_sites.fract_transf_matrix[1][1] 0.010749 _atom_sites.fract_transf_matrix[1][2] 0.006206 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012412 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013264 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 291 ? ? ? A . n A 1 2 THR 2 292 ? ? ? A . n A 1 3 GLU 3 293 ? ? ? A . n A 1 4 LEU 4 294 ? ? ? A . n A 1 5 ASN 5 295 ? ? ? A . n A 1 6 ILE 6 296 ? ? ? A . n A 1 7 GLU 7 297 ? ? ? A . n A 1 8 ASN 8 298 ? ? ? A . n A 1 9 GLU 9 299 ? ? ? A . n A 1 10 ALA 10 300 ? ? ? A . n A 1 11 LYS 11 301 301 LYS LYS A . n A 1 12 LEU 12 302 302 LEU LEU A . n A 1 13 PHE 13 303 303 PHE PHE A . n A 1 14 LYS 14 304 304 LYS LYS A . n A 1 15 ASN 15 305 305 ASN ASN A . n A 1 16 LEU 16 306 306 LEU LEU A . n A 1 17 THR 17 307 307 THR THR A . n A 1 18 PHE 18 308 308 PHE PHE A . n A 1 19 TYR 19 309 309 TYR TYR A . n A 1 20 LEU 20 310 310 LEU LEU A . n A 1 21 TYR 21 311 311 TYR TYR A . n A 1 22 GLU 22 312 312 GLU GLU A . n A 1 23 PHE 23 313 313 PHE PHE A . n A 1 24 PRO 24 314 314 PRO PRO A . n A 1 25 ASN 25 315 315 ASN ASN A . n A 1 26 THR 26 316 316 THR THR A . n A 1 27 LYS 27 317 317 LYS LYS A . n A 1 28 VAL 28 318 318 VAL VAL A . n A 1 29 SER 29 319 319 SER SER A . n A 1 30 ARG 30 320 320 ARG ARG A . n A 1 31 LEU 31 321 321 LEU LEU A . n A 1 32 HIS 32 322 322 HIS HIS A . n A 1 33 LYS 33 323 323 LYS LYS A . n A 1 34 CYS 34 324 324 CYS CYS A . n A 1 35 LEU 35 325 325 LEU LEU A . n A 1 36 SER 36 326 326 SER SER A . n A 1 37 ASP 37 327 327 ASP ASP A . n A 1 38 ASN 38 328 328 ASN ASN A . n A 1 39 GLY 39 329 329 GLY GLY A . n A 1 40 GLY 40 330 330 GLY GLY A . n A 1 41 GLN 41 331 331 GLN GLN A . n A 1 42 ILE 42 332 332 ILE ILE A . n A 1 43 SER 43 333 333 SER SER A . n A 1 44 GLU 44 334 334 GLU GLU A . n A 1 45 PHE 45 335 335 PHE PHE A . n A 1 46 LEU 46 336 336 LEU LEU A . n A 1 47 SER 47 337 337 SER SER A . n A 1 48 SER 48 338 338 SER SER A . n A 1 49 THR 49 339 339 THR THR A . n A 1 50 ILE 50 340 340 ILE ILE A . n A 1 51 ASP 51 341 341 ASP ASP A . n A 1 52 PHE 52 342 342 PHE PHE A . n A 1 53 VAL 53 343 343 VAL VAL A . n A 1 54 VAL 54 344 344 VAL VAL A . n A 1 55 ILE 55 345 345 ILE ILE A . n A 1 56 PRO 56 346 346 PRO PRO A . n A 1 57 HIS 57 347 347 HIS HIS A . n A 1 58 TYR 58 348 348 TYR TYR A . n A 1 59 PHE 59 349 349 PHE PHE A . n A 1 60 PRO 60 350 350 PRO PRO A . n A 1 61 VAL 61 351 351 VAL VAL A . n A 1 62 ASP 62 352 352 ASP ASP A . n A 1 63 GLU 63 353 353 GLU GLU A . n A 1 64 LEU 64 354 354 LEU LEU A . n A 1 65 PRO 65 355 355 PRO PRO A . n A 1 66 ILE 66 356 356 ILE ILE A . n A 1 67 PHE 67 357 357 PHE PHE A . n A 1 68 SER 68 358 358 SER SER A . n A 1 69 PHE 69 359 359 PHE PHE A . n A 1 70 PRO 70 360 360 PRO PRO A . n A 1 71 THR 71 361 361 THR THR A . n A 1 72 VAL 72 362 362 VAL VAL A . n A 1 73 ASN 73 363 363 ASN ASN A . n A 1 74 GLU 74 364 364 GLU GLU A . n A 1 75 TRP 75 365 365 TRP TRP A . n A 1 76 TRP 76 366 366 TRP TRP A . n A 1 77 ILE 77 367 367 ILE ILE A . n A 1 78 GLU 78 368 368 GLU GLU A . n A 1 79 ARG 79 369 369 ARG ARG A . n A 1 80 CYS 80 370 370 CYS CYS A . n A 1 81 LEU 81 371 371 LEU LEU A . n A 1 82 TYR 82 372 372 TYR TYR A . n A 1 83 TYR 83 373 373 TYR TYR A . n A 1 84 LYS 84 374 374 LYS LYS A . n A 1 85 LYS 85 375 375 LYS LYS A . n A 1 86 ILE 86 376 376 ILE ILE A . n A 1 87 PHE 87 377 377 PHE PHE A . n A 1 88 GLY 88 378 378 GLY GLY A . n A 1 89 ILE 89 379 379 ILE ILE A . n A 1 90 ASP 90 380 380 ASP ASP A . n A 1 91 GLU 91 381 381 GLU GLU A . n A 1 92 HIS 92 382 382 HIS HIS A . n A 1 93 ALA 93 383 383 ALA ALA A . n A 1 94 LEU 94 384 384 LEU LEU A . n A 1 95 ALA 95 385 385 ALA ALA A . n A 1 96 LYS 96 386 386 LYS LYS A . n A 1 97 PRO 97 387 387 PRO PRO A . n A 1 98 PHE 98 388 388 PHE PHE A . n A 1 99 PHE 99 389 389 PHE PHE A . n A 1 100 ARG 100 390 390 ARG ARG A . n A 1 101 PRO 101 391 391 PRO PRO A . n A 1 102 SER 102 392 392 SER SER A . n A 1 103 LEU 103 393 393 LEU LEU A . n A 1 104 VAL 104 394 394 VAL VAL A . n A 1 105 PRO 105 395 395 PRO PRO A . n A 1 106 TYR 106 396 396 TYR TYR A . n A 1 107 PHE 107 397 397 PHE PHE A . n A 1 108 ASN 108 398 398 ASN ASN A . n A 1 109 GLY 109 399 399 GLY GLY A . n A 1 110 LEU 110 400 400 LEU LEU A . n A 1 111 SER 111 401 401 SER SER A . n A 1 112 ILE 112 402 402 ILE ILE A . n A 1 113 HIS 113 403 403 HIS HIS A . n A 1 114 LEU 114 404 404 LEU LEU A . n A 1 115 THR 115 405 405 THR THR A . n A 1 116 GLY 116 406 406 GLY GLY A . n A 1 117 PHE 117 407 407 PHE PHE A . n A 1 118 LYS 118 408 408 LYS LYS A . n A 1 119 GLY 119 409 409 GLY GLY A . n A 1 120 GLU 120 410 410 GLU GLU A . n A 1 121 GLU 121 411 411 GLU GLU A . n A 1 122 LEU 122 412 412 LEU LEU A . n A 1 123 SER 123 413 413 SER SER A . n A 1 124 HIS 124 414 414 HIS HIS A . n A 1 125 LEU 125 415 415 LEU LEU A . n A 1 126 LYS 126 416 416 LYS LYS A . n A 1 127 LYS 127 417 417 LYS LYS A . n A 1 128 ALA 128 418 418 ALA ALA A . n A 1 129 LEU 129 419 419 LEU LEU A . n A 1 130 THR 130 420 420 THR THR A . n A 1 131 ILE 131 421 421 ILE ILE A . n A 1 132 LEU 132 422 422 LEU LEU A . n A 1 133 GLY 133 423 423 GLY GLY A . n A 1 134 ALA 134 424 424 ALA ALA A . n A 1 135 VAL 135 425 425 VAL VAL A . n A 1 136 VAL 136 426 426 VAL VAL A . n A 1 137 HIS 137 427 427 HIS HIS A . n A 1 138 GLU 138 428 428 GLU GLU A . n A 1 139 PHE 139 429 429 PHE PHE A . n A 1 140 LEU 140 430 430 LEU LEU A . n A 1 141 GLY 141 431 431 GLY GLY A . n A 1 142 VAL 142 432 432 VAL VAL A . n A 1 143 GLN 143 433 433 GLN GLN A . n A 1 144 ARG 144 434 434 ARG ARG A . n A 1 145 SER 145 435 435 SER SER A . n A 1 146 ILE 146 436 436 ILE ILE A . n A 1 147 LEU 147 437 437 LEU LEU A . n A 1 148 LEU 148 438 438 LEU LEU A . n A 1 149 VAL 149 439 439 VAL VAL A . n A 1 150 ASN 150 440 440 ASN ASN A . n A 1 151 THR 151 441 441 THR THR A . n A 1 152 ASN 152 442 442 ASN ASN A . n A 1 153 GLU 153 443 443 GLU GLU A . n A 1 154 PRO 154 444 444 PRO PRO A . n A 1 155 PHE 155 445 445 PHE PHE A . n A 1 156 SER 156 446 446 SER SER A . n A 1 157 MET 157 447 447 MET MET A . n A 1 158 LYS 158 448 448 LYS LYS A . n A 1 159 THR 159 449 449 THR THR A . n A 1 160 ARG 160 450 450 ARG ARG A . n A 1 161 PHE 161 451 451 PHE PHE A . n A 1 162 LYS 162 452 452 LYS LYS A . n A 1 163 ILE 163 453 453 ILE ILE A . n A 1 164 GLN 164 454 454 GLN GLN A . n A 1 165 HIS 165 455 455 HIS HIS A . n A 1 166 ALA 166 456 456 ALA ALA A . n A 1 167 THR 167 457 457 THR THR A . n A 1 168 GLU 168 458 458 GLU GLU A . n A 1 169 TRP 169 459 459 TRP TRP A . n A 1 170 ASN 170 460 460 ASN ASN A . n A 1 171 VAL 171 461 461 VAL VAL A . n A 1 172 ARG 172 462 462 ARG ARG A . n A 1 173 VAL 173 463 463 VAL VAL A . n A 1 174 VAL 174 464 464 VAL VAL A . n A 1 175 GLY 175 465 465 GLY GLY A . n A 1 176 VAL 176 466 466 VAL VAL A . n A 1 177 ALA 177 467 467 ALA ALA A . n A 1 178 TRP 178 468 468 TRP TRP A . n A 1 179 LEU 179 469 469 LEU LEU A . n A 1 180 TRP 180 470 470 TRP TRP A . n A 1 181 ASN 181 471 471 ASN ASN A . n A 1 182 ILE 182 472 472 ILE ILE A . n A 1 183 ILE 183 473 473 ILE ILE A . n A 1 184 GLN 184 474 474 GLN GLN A . n A 1 185 SER 185 475 475 SER SER A . n A 1 186 GLY 186 476 476 GLY GLY A . n A 1 187 LYS 187 477 477 LYS LYS A . n A 1 188 PHE 188 478 478 PHE PHE A . n A 1 189 ILE 189 479 479 ILE ILE A . n A 1 190 ASP 190 480 480 ASP ASP A . n A 1 191 GLN 191 481 481 GLN GLN A . n A 1 192 VAL 192 482 482 VAL VAL A . n A 1 193 SER 193 483 483 SER SER A . n A 1 194 PRO 194 484 484 PRO PRO A . n A 1 195 TRP 195 485 485 TRP TRP A . n A 1 196 ALA 196 486 486 ALA ALA A . n A 1 197 ILE 197 487 487 ILE ILE A . n A 1 198 ASP 198 488 488 ASP ASP A . n A 1 199 LYS 199 489 ? ? ? A . n A 1 200 LYS 200 490 ? ? ? A . n A 1 201 GLU 201 491 ? ? ? A . n A 1 202 ASN 202 492 ? ? ? A . n A 1 203 GLN 203 493 ? ? ? A . n A 1 204 GLU 204 494 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 1489 1489 CL CL A . C 3 MES 1 3001 3001 MES MES A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . D 4 HOH 113 2113 2113 HOH HOH A . D 4 HOH 114 2114 2114 HOH HOH A . D 4 HOH 115 2115 2115 HOH HOH A . D 4 HOH 116 2116 2116 HOH HOH A . D 4 HOH 117 2117 2117 HOH HOH A . D 4 HOH 118 2118 2118 HOH HOH A . D 4 HOH 119 2119 2119 HOH HOH A . D 4 HOH 120 2120 2120 HOH HOH A . D 4 HOH 121 2121 2121 HOH HOH A . D 4 HOH 122 2122 2122 HOH HOH A . D 4 HOH 123 2123 2123 HOH HOH A . D 4 HOH 124 2124 2124 HOH HOH A . D 4 HOH 125 2125 2125 HOH HOH A . D 4 HOH 126 2126 2126 HOH HOH A . D 4 HOH 127 2127 2127 HOH HOH A . D 4 HOH 128 2128 2128 HOH HOH A . D 4 HOH 129 2129 2129 HOH HOH A . D 4 HOH 130 2130 2130 HOH HOH A . D 4 HOH 131 2131 2131 HOH HOH A . D 4 HOH 132 2132 2132 HOH HOH A . D 4 HOH 133 2133 2133 HOH HOH A . D 4 HOH 134 2134 2134 HOH HOH A . D 4 HOH 135 2135 2135 HOH HOH A . D 4 HOH 136 2136 2136 HOH HOH A . D 4 HOH 137 2137 2137 HOH HOH A . D 4 HOH 138 2138 2138 HOH HOH A . D 4 HOH 139 2139 2139 HOH HOH A . D 4 HOH 140 2140 2140 HOH HOH A . D 4 HOH 141 2141 2141 HOH HOH A . D 4 HOH 142 2142 2142 HOH HOH A . D 4 HOH 143 2143 2143 HOH HOH A . D 4 HOH 144 2144 2144 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-09 2 'Structure model' 1 1 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' Other 5 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_initial_refinement_model 6 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_sf' 4 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 iMOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 BALBES phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 303 ? ? -96.71 36.07 2 1 SER A 358 ? ? -88.97 30.74 3 1 SER A 358 ? ? -89.40 31.30 4 1 GLN A 433 ? ? -97.88 41.97 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 304 ? CG ? A LYS 14 CG 2 1 Y 1 A LYS 304 ? CD ? A LYS 14 CD 3 1 Y 1 A LYS 304 ? CE ? A LYS 14 CE 4 1 Y 1 A LYS 304 ? NZ ? A LYS 14 NZ 5 1 Y 1 A ARG 462 ? CZ ? A ARG 172 CZ 6 1 Y 1 A ARG 462 ? NH1 ? A ARG 172 NH1 7 1 Y 1 A ARG 462 ? NH2 ? A ARG 172 NH2 8 1 Y 1 A ASP 488 ? CG ? A ASP 198 CG 9 1 Y 1 A ASP 488 ? OD1 ? A ASP 198 OD1 10 1 Y 1 A ASP 488 ? OD2 ? A ASP 198 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 291 ? A ASP 1 2 1 Y 1 A THR 292 ? A THR 2 3 1 Y 1 A GLU 293 ? A GLU 3 4 1 Y 1 A LEU 294 ? A LEU 4 5 1 Y 1 A ASN 295 ? A ASN 5 6 1 Y 1 A ILE 296 ? A ILE 6 7 1 Y 1 A GLU 297 ? A GLU 7 8 1 Y 1 A ASN 298 ? A ASN 8 9 1 Y 1 A GLU 299 ? A GLU 9 10 1 Y 1 A ALA 300 ? A ALA 10 11 1 Y 1 A LYS 489 ? A LYS 199 12 1 Y 1 A LYS 490 ? A LYS 200 13 1 Y 1 A GLU 491 ? A GLU 201 14 1 Y 1 A ASN 492 ? A ASN 202 15 1 Y 1 A GLN 493 ? A GLN 203 16 1 Y 1 A GLU 494 ? A GLU 204 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MES O1 O N N 231 MES C2 C N N 232 MES C3 C N N 233 MES N4 N N N 234 MES C5 C N N 235 MES C6 C N N 236 MES C7 C N N 237 MES C8 C N N 238 MES S S N N 239 MES O1S O N N 240 MES O2S O N N 241 MES O3S O N N 242 MES H21 H N N 243 MES H22 H N N 244 MES H31 H N N 245 MES H32 H N N 246 MES HN4 H N N 247 MES H51 H N N 248 MES H52 H N N 249 MES H61 H N N 250 MES H62 H N N 251 MES H71 H N N 252 MES H72 H N N 253 MES H81 H N N 254 MES H82 H N N 255 MET N N N N 256 MET CA C N S 257 MET C C N N 258 MET O O N N 259 MET CB C N N 260 MET CG C N N 261 MET SD S N N 262 MET CE C N N 263 MET OXT O N N 264 MET H H N N 265 MET H2 H N N 266 MET HA H N N 267 MET HB2 H N N 268 MET HB3 H N N 269 MET HG2 H N N 270 MET HG3 H N N 271 MET HE1 H N N 272 MET HE2 H N N 273 MET HE3 H N N 274 MET HXT H N N 275 PHE N N N N 276 PHE CA C N S 277 PHE C C N N 278 PHE O O N N 279 PHE CB C N N 280 PHE CG C Y N 281 PHE CD1 C Y N 282 PHE CD2 C Y N 283 PHE CE1 C Y N 284 PHE CE2 C Y N 285 PHE CZ C Y N 286 PHE OXT O N N 287 PHE H H N N 288 PHE H2 H N N 289 PHE HA H N N 290 PHE HB2 H N N 291 PHE HB3 H N N 292 PHE HD1 H N N 293 PHE HD2 H N N 294 PHE HE1 H N N 295 PHE HE2 H N N 296 PHE HZ H N N 297 PHE HXT H N N 298 PRO N N N N 299 PRO CA C N S 300 PRO C C N N 301 PRO O O N N 302 PRO CB C N N 303 PRO CG C N N 304 PRO CD C N N 305 PRO OXT O N N 306 PRO H H N N 307 PRO HA H N N 308 PRO HB2 H N N 309 PRO HB3 H N N 310 PRO HG2 H N N 311 PRO HG3 H N N 312 PRO HD2 H N N 313 PRO HD3 H N N 314 PRO HXT H N N 315 SER N N N N 316 SER CA C N S 317 SER C C N N 318 SER O O N N 319 SER CB C N N 320 SER OG O N N 321 SER OXT O N N 322 SER H H N N 323 SER H2 H N N 324 SER HA H N N 325 SER HB2 H N N 326 SER HB3 H N N 327 SER HG H N N 328 SER HXT H N N 329 THR N N N N 330 THR CA C N S 331 THR C C N N 332 THR O O N N 333 THR CB C N R 334 THR OG1 O N N 335 THR CG2 C N N 336 THR OXT O N N 337 THR H H N N 338 THR H2 H N N 339 THR HA H N N 340 THR HB H N N 341 THR HG1 H N N 342 THR HG21 H N N 343 THR HG22 H N N 344 THR HG23 H N N 345 THR HXT H N N 346 TRP N N N N 347 TRP CA C N S 348 TRP C C N N 349 TRP O O N N 350 TRP CB C N N 351 TRP CG C Y N 352 TRP CD1 C Y N 353 TRP CD2 C Y N 354 TRP NE1 N Y N 355 TRP CE2 C Y N 356 TRP CE3 C Y N 357 TRP CZ2 C Y N 358 TRP CZ3 C Y N 359 TRP CH2 C Y N 360 TRP OXT O N N 361 TRP H H N N 362 TRP H2 H N N 363 TRP HA H N N 364 TRP HB2 H N N 365 TRP HB3 H N N 366 TRP HD1 H N N 367 TRP HE1 H N N 368 TRP HE3 H N N 369 TRP HZ2 H N N 370 TRP HZ3 H N N 371 TRP HH2 H N N 372 TRP HXT H N N 373 TYR N N N N 374 TYR CA C N S 375 TYR C C N N 376 TYR O O N N 377 TYR CB C N N 378 TYR CG C Y N 379 TYR CD1 C Y N 380 TYR CD2 C Y N 381 TYR CE1 C Y N 382 TYR CE2 C Y N 383 TYR CZ C Y N 384 TYR OH O N N 385 TYR OXT O N N 386 TYR H H N N 387 TYR H2 H N N 388 TYR HA H N N 389 TYR HB2 H N N 390 TYR HB3 H N N 391 TYR HD1 H N N 392 TYR HD2 H N N 393 TYR HE1 H N N 394 TYR HE2 H N N 395 TYR HH H N N 396 TYR HXT H N N 397 VAL N N N N 398 VAL CA C N S 399 VAL C C N N 400 VAL O O N N 401 VAL CB C N N 402 VAL CG1 C N N 403 VAL CG2 C N N 404 VAL OXT O N N 405 VAL H H N N 406 VAL H2 H N N 407 VAL HA H N N 408 VAL HB H N N 409 VAL HG11 H N N 410 VAL HG12 H N N 411 VAL HG13 H N N 412 VAL HG21 H N N 413 VAL HG22 H N N 414 VAL HG23 H N N 415 VAL HXT H N N 416 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MES O1 C2 sing N N 218 MES O1 C6 sing N N 219 MES C2 C3 sing N N 220 MES C2 H21 sing N N 221 MES C2 H22 sing N N 222 MES C3 N4 sing N N 223 MES C3 H31 sing N N 224 MES C3 H32 sing N N 225 MES N4 C5 sing N N 226 MES N4 C7 sing N N 227 MES N4 HN4 sing N N 228 MES C5 C6 sing N N 229 MES C5 H51 sing N N 230 MES C5 H52 sing N N 231 MES C6 H61 sing N N 232 MES C6 H62 sing N N 233 MES C7 C8 sing N N 234 MES C7 H71 sing N N 235 MES C7 H72 sing N N 236 MES C8 S sing N N 237 MES C8 H81 sing N N 238 MES C8 H82 sing N N 239 MES S O1S doub N N 240 MES S O2S doub N N 241 MES S O3S sing N N 242 MET N CA sing N N 243 MET N H sing N N 244 MET N H2 sing N N 245 MET CA C sing N N 246 MET CA CB sing N N 247 MET CA HA sing N N 248 MET C O doub N N 249 MET C OXT sing N N 250 MET CB CG sing N N 251 MET CB HB2 sing N N 252 MET CB HB3 sing N N 253 MET CG SD sing N N 254 MET CG HG2 sing N N 255 MET CG HG3 sing N N 256 MET SD CE sing N N 257 MET CE HE1 sing N N 258 MET CE HE2 sing N N 259 MET CE HE3 sing N N 260 MET OXT HXT sing N N 261 PHE N CA sing N N 262 PHE N H sing N N 263 PHE N H2 sing N N 264 PHE CA C sing N N 265 PHE CA CB sing N N 266 PHE CA HA sing N N 267 PHE C O doub N N 268 PHE C OXT sing N N 269 PHE CB CG sing N N 270 PHE CB HB2 sing N N 271 PHE CB HB3 sing N N 272 PHE CG CD1 doub Y N 273 PHE CG CD2 sing Y N 274 PHE CD1 CE1 sing Y N 275 PHE CD1 HD1 sing N N 276 PHE CD2 CE2 doub Y N 277 PHE CD2 HD2 sing N N 278 PHE CE1 CZ doub Y N 279 PHE CE1 HE1 sing N N 280 PHE CE2 CZ sing Y N 281 PHE CE2 HE2 sing N N 282 PHE CZ HZ sing N N 283 PHE OXT HXT sing N N 284 PRO N CA sing N N 285 PRO N CD sing N N 286 PRO N H sing N N 287 PRO CA C sing N N 288 PRO CA CB sing N N 289 PRO CA HA sing N N 290 PRO C O doub N N 291 PRO C OXT sing N N 292 PRO CB CG sing N N 293 PRO CB HB2 sing N N 294 PRO CB HB3 sing N N 295 PRO CG CD sing N N 296 PRO CG HG2 sing N N 297 PRO CG HG3 sing N N 298 PRO CD HD2 sing N N 299 PRO CD HD3 sing N N 300 PRO OXT HXT sing N N 301 SER N CA sing N N 302 SER N H sing N N 303 SER N H2 sing N N 304 SER CA C sing N N 305 SER CA CB sing N N 306 SER CA HA sing N N 307 SER C O doub N N 308 SER C OXT sing N N 309 SER CB OG sing N N 310 SER CB HB2 sing N N 311 SER CB HB3 sing N N 312 SER OG HG sing N N 313 SER OXT HXT sing N N 314 THR N CA sing N N 315 THR N H sing N N 316 THR N H2 sing N N 317 THR CA C sing N N 318 THR CA CB sing N N 319 THR CA HA sing N N 320 THR C O doub N N 321 THR C OXT sing N N 322 THR CB OG1 sing N N 323 THR CB CG2 sing N N 324 THR CB HB sing N N 325 THR OG1 HG1 sing N N 326 THR CG2 HG21 sing N N 327 THR CG2 HG22 sing N N 328 THR CG2 HG23 sing N N 329 THR OXT HXT sing N N 330 TRP N CA sing N N 331 TRP N H sing N N 332 TRP N H2 sing N N 333 TRP CA C sing N N 334 TRP CA CB sing N N 335 TRP CA HA sing N N 336 TRP C O doub N N 337 TRP C OXT sing N N 338 TRP CB CG sing N N 339 TRP CB HB2 sing N N 340 TRP CB HB3 sing N N 341 TRP CG CD1 doub Y N 342 TRP CG CD2 sing Y N 343 TRP CD1 NE1 sing Y N 344 TRP CD1 HD1 sing N N 345 TRP CD2 CE2 doub Y N 346 TRP CD2 CE3 sing Y N 347 TRP NE1 CE2 sing Y N 348 TRP NE1 HE1 sing N N 349 TRP CE2 CZ2 sing Y N 350 TRP CE3 CZ3 doub Y N 351 TRP CE3 HE3 sing N N 352 TRP CZ2 CH2 doub Y N 353 TRP CZ2 HZ2 sing N N 354 TRP CZ3 CH2 sing Y N 355 TRP CZ3 HZ3 sing N N 356 TRP CH2 HH2 sing N N 357 TRP OXT HXT sing N N 358 TYR N CA sing N N 359 TYR N H sing N N 360 TYR N H2 sing N N 361 TYR CA C sing N N 362 TYR CA CB sing N N 363 TYR CA HA sing N N 364 TYR C O doub N N 365 TYR C OXT sing N N 366 TYR CB CG sing N N 367 TYR CB HB2 sing N N 368 TYR CB HB3 sing N N 369 TYR CG CD1 doub Y N 370 TYR CG CD2 sing Y N 371 TYR CD1 CE1 sing Y N 372 TYR CD1 HD1 sing N N 373 TYR CD2 CE2 doub Y N 374 TYR CD2 HD2 sing N N 375 TYR CE1 CZ doub Y N 376 TYR CE1 HE1 sing N N 377 TYR CE2 CZ sing Y N 378 TYR CE2 HE2 sing N N 379 TYR CZ OH sing N N 380 TYR OH HH sing N N 381 TYR OXT HXT sing N N 382 VAL N CA sing N N 383 VAL N H sing N N 384 VAL N H2 sing N N 385 VAL CA C sing N N 386 VAL CA CB sing N N 387 VAL CA HA sing N N 388 VAL C O doub N N 389 VAL C OXT sing N N 390 VAL CB CG1 sing N N 391 VAL CB CG2 sing N N 392 VAL CB HB sing N N 393 VAL CG1 HG11 sing N N 394 VAL CG1 HG12 sing N N 395 VAL CG1 HG13 sing N N 396 VAL CG2 HG21 sing N N 397 VAL CG2 HG22 sing N N 398 VAL CG2 HG23 sing N N 399 VAL OXT HXT sing N N 400 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' MES 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2XNH _pdbx_initial_refinement_model.details 'PDB ENTRY 2XNH' #