data_4BOE # _entry.id 4BOE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4BOE pdb_00004boe 10.2210/pdb4boe/pdb PDBE EBI-56907 ? ? WWPDB D_1290056907 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4BOE _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-05-19 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Roversi, P.' 1 'Johnson, S.' 2 'Preston, S.' 3 'Austyn, J.M.' 4 'Nuttall, P.' 5 'Lea, S.M.' 6 # _citation.id primary _citation.title 'Structural basis of cholesterol binding by a novel clade of dendritic cell modulators from ticks.' _citation.journal_abbrev 'Sci Rep' _citation.journal_volume 7 _citation.page_first 16057 _citation.page_last 16057 _citation.year 2017 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2045-2322 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 29167574 _citation.pdbx_database_id_DOI 10.1038/s41598-017-16413-2 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Roversi, P.' 1 ? primary 'Johnson, S.' 2 ? primary 'Preston, S.G.' 3 ? primary 'Nunn, M.A.' 4 ? primary 'Paesen, G.C.' 5 ? primary 'Austyn, J.M.' 6 ? primary 'Nuttall, P.A.' 7 ? primary 'Lea, S.M.' 8 ? # _cell.entry_id 4BOE _cell.length_a 84.330 _cell.length_b 84.330 _cell.length_c 90.520 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BOE _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man JAPANIN 18640.088 1 ? ? ? ? 2 branched man ;alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 732.682 1 ? ? ? ? 3 non-polymer syn CHOLESTEROL 386.654 1 ? ? ? ? 4 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 4 ? ? ? ? 5 non-polymer syn IMIDAZOLE 69.085 3 ? ? ? ? 6 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 7 water nat water 18.015 89 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TPSMPAINTQTLYLAGHSSKLFERNVGCVKTRYLNQTGDWVTRSLIYVFTFDTEPWVTQAGAFQVKWEPYSPLLRVKASD YVRDNLGAKPDYFIRTYDNDFLLLSDLKEVRSTCSLWVTLKYVDRIPETINRTFYTICPDPVPVPFDERCYPGGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;TPSMPAINTQTLYLAGHSSKLFERNVGCVKTRYLNQTGDWVTRSLIYVFTFDTEPWVTQAGAFQVKWEPYSPLLRVKASD YVRDNLGAKPDYFIRTYDNDFLLLSDLKEVRSTCSLWVTLKYVDRIPETINRTFYTICPDPVPVPFDERCYPGGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PRO n 1 3 SER n 1 4 MET n 1 5 PRO n 1 6 ALA n 1 7 ILE n 1 8 ASN n 1 9 THR n 1 10 GLN n 1 11 THR n 1 12 LEU n 1 13 TYR n 1 14 LEU n 1 15 ALA n 1 16 GLY n 1 17 HIS n 1 18 SER n 1 19 SER n 1 20 LYS n 1 21 LEU n 1 22 PHE n 1 23 GLU n 1 24 ARG n 1 25 ASN n 1 26 VAL n 1 27 GLY n 1 28 CYS n 1 29 VAL n 1 30 LYS n 1 31 THR n 1 32 ARG n 1 33 TYR n 1 34 LEU n 1 35 ASN n 1 36 GLN n 1 37 THR n 1 38 GLY n 1 39 ASP n 1 40 TRP n 1 41 VAL n 1 42 THR n 1 43 ARG n 1 44 SER n 1 45 LEU n 1 46 ILE n 1 47 TYR n 1 48 VAL n 1 49 PHE n 1 50 THR n 1 51 PHE n 1 52 ASP n 1 53 THR n 1 54 GLU n 1 55 PRO n 1 56 TRP n 1 57 VAL n 1 58 THR n 1 59 GLN n 1 60 ALA n 1 61 GLY n 1 62 ALA n 1 63 PHE n 1 64 GLN n 1 65 VAL n 1 66 LYS n 1 67 TRP n 1 68 GLU n 1 69 PRO n 1 70 TYR n 1 71 SER n 1 72 PRO n 1 73 LEU n 1 74 LEU n 1 75 ARG n 1 76 VAL n 1 77 LYS n 1 78 ALA n 1 79 SER n 1 80 ASP n 1 81 TYR n 1 82 VAL n 1 83 ARG n 1 84 ASP n 1 85 ASN n 1 86 LEU n 1 87 GLY n 1 88 ALA n 1 89 LYS n 1 90 PRO n 1 91 ASP n 1 92 TYR n 1 93 PHE n 1 94 ILE n 1 95 ARG n 1 96 THR n 1 97 TYR n 1 98 ASP n 1 99 ASN n 1 100 ASP n 1 101 PHE n 1 102 LEU n 1 103 LEU n 1 104 LEU n 1 105 SER n 1 106 ASP n 1 107 LEU n 1 108 LYS n 1 109 GLU n 1 110 VAL n 1 111 ARG n 1 112 SER n 1 113 THR n 1 114 CYS n 1 115 SER n 1 116 LEU n 1 117 TRP n 1 118 VAL n 1 119 THR n 1 120 LEU n 1 121 LYS n 1 122 TYR n 1 123 VAL n 1 124 ASP n 1 125 ARG n 1 126 ILE n 1 127 PRO n 1 128 GLU n 1 129 THR n 1 130 ILE n 1 131 ASN n 1 132 ARG n 1 133 THR n 1 134 PHE n 1 135 TYR n 1 136 THR n 1 137 ILE n 1 138 CYS n 1 139 PRO n 1 140 ASP n 1 141 PRO n 1 142 VAL n 1 143 PRO n 1 144 VAL n 1 145 PRO n 1 146 PHE n 1 147 ASP n 1 148 GLU n 1 149 ARG n 1 150 CYS n 1 151 TYR n 1 152 PRO n 1 153 GLY n 1 154 GLY n 1 155 HIS n 1 156 HIS n 1 157 HIS n 1 158 HIS n 1 159 HIS n 1 160 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'BROWN EAR TICK' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'RHIPICEPHALUS APPENDICULATUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 34631 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'FALL ARMYWORM' _entity_src_gen.pdbx_host_org_scientific_name 'SPODOPTERA FRUGIPERDA' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line SF9 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code M1MR49_RHIAP _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession M1MR49 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4BOE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 152 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession M1MR49 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 176 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 152 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4BOE GLY A 153 ? UNP M1MR49 ? ? 'expression tag' 153 1 1 4BOE GLY A 154 ? UNP M1MR49 ? ? 'expression tag' 154 2 1 4BOE HIS A 155 ? UNP M1MR49 ? ? 'expression tag' 155 3 1 4BOE HIS A 156 ? UNP M1MR49 ? ? 'expression tag' 156 4 1 4BOE HIS A 157 ? UNP M1MR49 ? ? 'expression tag' 157 5 1 4BOE HIS A 158 ? UNP M1MR49 ? ? 'expression tag' 158 6 1 4BOE HIS A 159 ? UNP M1MR49 ? ? 'expression tag' 159 7 1 4BOE HIS A 160 ? UNP M1MR49 ? ? 'expression tag' 160 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CLR non-polymer . CHOLESTEROL ? 'C27 H46 O' 386.654 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4BOE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.24 _exptl_crystal.density_percent_sol 71 _exptl_crystal.description 'THE SEARCH MODEL WAS PREPARED WITH THE PROGRAM CHAINSAW' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M IMIDAZOLE PH 7.0 AND 50% V/V 1-METHYL-PENTAN-(2,4)DIOL (MPD).' # _diffrn.id 1 _diffrn.ambient_temp 120 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2010-04-28 _diffrn_detector.details 'CYLINDRICAL GRAZING INCIDENCE MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9600 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.9600 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4BOE _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 84.30 _reflns.d_resolution_high 2.20 _reflns.number_obs 16985 _reflns.number_all ? _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.20 _reflns.B_iso_Wilson_estimate 45.43 _reflns.pdbx_redundancy 8.6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.30 _reflns_shell.percent_possible_all 93.2 _reflns_shell.Rmerge_I_obs 0.62 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.20 _reflns_shell.pdbx_redundancy 4.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4BOE _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16158 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 61.70 _refine.ls_d_res_high 2.24 _refine.ls_percent_reflns_obs 99.30 _refine.ls_R_factor_obs 0.1794 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1784 _refine.ls_R_factor_R_free 0.1977 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.03 _refine.ls_number_reflns_R_free 812 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.9440 _refine.correlation_coeff_Fo_to_Fc_free 0.9395 _refine.B_iso_mean 46.31 _refine.aniso_B[1][1] -2.3529 _refine.aniso_B[2][2] -2.3529 _refine.aniso_B[3][3] 4.7057 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1QFT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.231 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.135 _refine.pdbx_overall_SU_R_Blow_DPI 0.158 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.136 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4BOE _refine_analyze.Luzzati_coordinate_error_obs 0.218 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1257 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 138 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 1484 _refine_hist.d_res_high 2.24 _refine_hist.d_res_low 61.70 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 2869 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 1.05 ? 2.00 5181 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 655 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 27 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 402 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 2869 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? 5.00 4 'X-RAY DIFFRACTION' SEMIHARMONIC t_omega_torsion 4.08 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 14.44 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 208 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 3038 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.24 _refine_ls_shell.d_res_low 2.40 _refine_ls_shell.number_reflns_R_work 2613 _refine_ls_shell.R_factor_R_work 0.1822 _refine_ls_shell.percent_reflns_obs 99.30 _refine_ls_shell.R_factor_R_free 0.2226 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.70 _refine_ls_shell.number_reflns_R_free 158 _refine_ls_shell.number_reflns_all 2771 _refine_ls_shell.R_factor_all 0.1844 # _struct.entry_id 4BOE _struct.title 'Japanin from Rhipicephalus appendiculatus bound to cholesterol: Tetragonal crystal form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4BOE _struct_keywords.pdbx_keywords 'CHOLESTEROL BINDING PROTEIN' _struct_keywords.text 'CHOLESTEROL BINDING PROTEIN, TICK' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 4 ? I N N 4 ? J N N 5 ? K N N 6 ? L N N 7 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 4 ? ASN A 8 ? MET A 4 ASN A 8 5 ? 5 HELX_P HELX_P2 2 LYS A 20 ? PHE A 22 ? LYS A 20 PHE A 22 5 ? 3 HELX_P HELX_P3 3 SER A 79 ? LEU A 86 ? SER A 79 LEU A 86 1 ? 8 HELX_P HELX_P4 4 LEU A 120 ? VAL A 123 ? LEU A 120 VAL A 123 5 ? 4 HELX_P HELX_P5 5 PRO A 127 ? CYS A 138 ? PRO A 127 CYS A 138 1 ? 12 HELX_P HELX_P6 6 ASP A 147 ? TYR A 151 ? ASP A 147 TYR A 151 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 150 SG ? ? A CYS 28 A CYS 150 1_555 ? ? ? ? ? ? ? 2.057 ? ? disulf2 disulf ? ? A CYS 114 SG A ? ? 1_555 A CYS 138 SG A ? A CYS 114 A CYS 138 1_555 ? ? ? ? ? ? ? 2.056 ? ? disulf3 disulf ? ? A CYS 114 SG B ? ? 1_555 A CYS 138 SG B ? A CYS 114 A CYS 138 1_555 ? ? ? ? ? ? ? 2.043 ? ? covale1 covale one ? A ASN 35 ND2 ? ? ? 1_555 K NAG . C1 ? ? A ASN 35 A NAG 1035 1_555 ? ? ? ? ? ? ? 1.434 ? N-Glycosylation covale2 covale one ? A ASN 131 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 131 B NAG 1 1_555 ? ? ? ? ? ? ? 1.433 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale4 covale both ? B NAG . O6 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 4 1_555 ? ? ? ? ? ? ? 1.407 ? ? covale5 covale both ? B NAG . O4 ? ? ? 1_555 B MAN . C1 ? ? B NAG 2 B MAN 3 1_555 ? ? ? ? ? ? ? 1.428 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AA 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 12 ? SER A 18 ? LEU A 12 SER A 18 AA 2 VAL A 26 ? THR A 37 ? VAL A 26 THR A 37 AA 3 TRP A 40 ? PHE A 49 ? TRP A 40 PHE A 49 AA 4 GLN A 59 ? LYS A 66 ? GLN A 59 LYS A 66 AA 5 LEU A 73 ? ALA A 78 ? LEU A 73 ALA A 78 AA 6 ASP A 91 ? ASP A 98 ? ASP A 91 ASP A 98 AA 7 PHE A 101 ? ASP A 106 ? PHE A 101 ASP A 106 AA 8 CYS A 114 ? VAL A 118 ? CYS A 114 VAL A 118 AA 9 LEU A 12 ? SER A 18 ? LEU A 12 SER A 18 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 14 ? N LEU A 14 O VAL A 29 ? O VAL A 29 AA 2 3 N THR A 37 ? N THR A 37 O TRP A 40 ? O TRP A 40 AA 3 4 N TYR A 47 ? N TYR A 47 O GLN A 59 ? O GLN A 59 AA 4 5 N LYS A 66 ? N LYS A 66 O ARG A 75 ? O ARG A 75 AA 5 6 N LEU A 74 ? N LEU A 74 O TYR A 92 ? O TYR A 92 AA 6 7 N ASP A 98 ? N ASP A 98 O PHE A 101 ? O PHE A 101 AA 7 8 N LEU A 104 ? N LEU A 104 O SER A 115 ? O SER A 115 # _database_PDB_matrix.entry_id 4BOE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4BOE _atom_sites.fract_transf_matrix[1][1] 0.011858 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011858 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011047 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 CYS 28 28 28 CYS CYS A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TRP 56 56 56 TRP TRP A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 TRP 67 67 67 TRP TRP A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 PHE 93 93 93 PHE PHE A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 CYS 114 114 114 CYS CYS A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 TRP 117 117 117 TRP TRP A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 TYR 135 135 135 TYR TYR A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 CYS 138 138 138 CYS CYS A . n A 1 139 PRO 139 139 139 PRO PRO A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 CYS 150 150 150 CYS CYS A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 HIS 155 155 ? ? ? A . n A 1 156 HIS 156 156 ? ? ? A . n A 1 157 HIS 157 157 ? ? ? A . n A 1 158 HIS 158 158 ? ? ? A . n A 1 159 HIS 159 159 ? ? ? A . n A 1 160 HIS 160 160 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CLR 1 575 575 CLR CLR A . D 4 MPD 1 576 576 MPD MPD A . E 4 MPD 1 577 577 MPD MPD A . F 5 IMD 1 579 579 IMD IMD A . G 5 IMD 1 582 582 IMD IMD A . H 4 MPD 1 586 586 MPD MPD A . I 4 MPD 1 587 587 MPD MPD A . J 5 IMD 1 589 589 IMD IMD A . K 6 NAG 1 1035 1035 NAG NAG A . L 7 HOH 1 2001 2001 HOH HOH A . L 7 HOH 2 2002 2002 HOH HOH A . L 7 HOH 3 2003 2003 HOH HOH A . L 7 HOH 4 2004 2004 HOH HOH A . L 7 HOH 5 2005 2005 HOH HOH A . L 7 HOH 6 2006 2006 HOH HOH A . L 7 HOH 7 2007 2007 HOH HOH A . L 7 HOH 8 2008 2008 HOH HOH A . L 7 HOH 9 2009 2009 HOH HOH A . L 7 HOH 10 2010 2010 HOH HOH A . L 7 HOH 11 2011 2011 HOH HOH A . L 7 HOH 12 2012 2012 HOH HOH A . L 7 HOH 13 2013 2013 HOH HOH A . L 7 HOH 14 2014 2014 HOH HOH A . L 7 HOH 15 2015 2015 HOH HOH A . L 7 HOH 16 2016 2016 HOH HOH A . L 7 HOH 17 2017 2017 HOH HOH A . L 7 HOH 18 2018 2018 HOH HOH A . L 7 HOH 19 2019 2019 HOH HOH A . L 7 HOH 20 2020 2020 HOH HOH A . L 7 HOH 21 2021 2021 HOH HOH A . L 7 HOH 22 2022 2022 HOH HOH A . L 7 HOH 23 2023 2023 HOH HOH A . L 7 HOH 24 2024 2024 HOH HOH A . L 7 HOH 25 2025 2025 HOH HOH A . L 7 HOH 26 2026 2026 HOH HOH A . L 7 HOH 27 2027 2027 HOH HOH A . L 7 HOH 28 2028 2028 HOH HOH A . L 7 HOH 29 2029 2029 HOH HOH A . L 7 HOH 30 2030 2030 HOH HOH A . L 7 HOH 31 2031 2031 HOH HOH A . L 7 HOH 32 2032 2032 HOH HOH A . L 7 HOH 33 2033 2033 HOH HOH A . L 7 HOH 34 2034 2034 HOH HOH A . L 7 HOH 35 2035 2035 HOH HOH A . L 7 HOH 36 2036 2036 HOH HOH A . L 7 HOH 37 2037 2037 HOH HOH A . L 7 HOH 38 2038 2038 HOH HOH A . L 7 HOH 39 2039 2039 HOH HOH A . L 7 HOH 40 2040 2040 HOH HOH A . L 7 HOH 41 2041 2041 HOH HOH A . L 7 HOH 42 2042 2042 HOH HOH A . L 7 HOH 43 2043 2043 HOH HOH A . L 7 HOH 44 2044 2044 HOH HOH A . L 7 HOH 45 2045 2045 HOH HOH A . L 7 HOH 46 2046 2046 HOH HOH A . L 7 HOH 47 2047 2047 HOH HOH A . L 7 HOH 48 2048 2048 HOH HOH A . L 7 HOH 49 2049 2049 HOH HOH A . L 7 HOH 50 2050 2050 HOH HOH A . L 7 HOH 51 2051 2051 HOH HOH A . L 7 HOH 52 2052 2052 HOH HOH A . L 7 HOH 53 2053 2053 HOH HOH A . L 7 HOH 54 2054 2054 HOH HOH A . L 7 HOH 55 2055 2055 HOH HOH A . L 7 HOH 56 2056 2056 HOH HOH A . L 7 HOH 57 2057 2057 HOH HOH A . L 7 HOH 58 2058 2058 HOH HOH A . L 7 HOH 59 2059 2059 HOH HOH A . L 7 HOH 60 2060 2060 HOH HOH A . L 7 HOH 61 2061 2061 HOH HOH A . L 7 HOH 62 2062 2062 HOH HOH A . L 7 HOH 63 2063 2063 HOH HOH A . L 7 HOH 64 2064 2064 HOH HOH A . L 7 HOH 65 2065 2065 HOH HOH A . L 7 HOH 66 2066 2066 HOH HOH A . L 7 HOH 67 2067 2067 HOH HOH A . L 7 HOH 68 2068 2068 HOH HOH A . L 7 HOH 69 2069 2069 HOH HOH A . L 7 HOH 70 2070 2070 HOH HOH A . L 7 HOH 71 2071 2071 HOH HOH A . L 7 HOH 72 2072 2072 HOH HOH A . L 7 HOH 73 2073 2073 HOH HOH A . L 7 HOH 74 2074 2074 HOH HOH A . L 7 HOH 75 2075 2075 HOH HOH A . L 7 HOH 76 2076 2076 HOH HOH A . L 7 HOH 77 2077 2077 HOH HOH A . L 7 HOH 78 2078 2078 HOH HOH A . L 7 HOH 79 2079 2079 HOH HOH A . L 7 HOH 80 2080 2080 HOH HOH A . L 7 HOH 81 2081 2081 HOH HOH A . L 7 HOH 82 2082 2082 HOH HOH A . L 7 HOH 83 2083 2083 HOH HOH A . L 7 HOH 84 2084 2084 HOH HOH A . L 7 HOH 85 2085 2085 HOH HOH A . L 7 HOH 86 2086 2086 HOH HOH A . L 7 HOH 87 2087 2087 HOH HOH A . L 7 HOH 88 2088 2088 HOH HOH A . L 7 HOH 89 2089 2089 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 35 A ASN 35 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 131 A ASN 131 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-05-28 2 'Structure model' 2 0 2017-12-13 3 'Structure model' 3 0 2020-07-29 4 'Structure model' 3 1 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' Other 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Derived calculations' 11 4 'Structure model' 'Refinement description' 12 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' citation 3 2 'Structure model' citation_author 4 3 'Structure model' atom_site 5 3 'Structure model' chem_comp 6 3 'Structure model' entity 7 3 'Structure model' pdbx_branch_scheme 8 3 'Structure model' pdbx_chem_comp_identifier 9 3 'Structure model' pdbx_database_status 10 3 'Structure model' pdbx_entity_branch 11 3 'Structure model' pdbx_entity_branch_descriptor 12 3 'Structure model' pdbx_entity_branch_link 13 3 'Structure model' pdbx_entity_branch_list 14 3 'Structure model' pdbx_entity_nonpoly 15 3 'Structure model' pdbx_nonpoly_scheme 16 3 'Structure model' pdbx_struct_assembly_gen 17 3 'Structure model' struct_asym 18 3 'Structure model' struct_conn 19 3 'Structure model' struct_site 20 3 'Structure model' struct_site_gen 21 4 'Structure model' chem_comp 22 4 'Structure model' chem_comp_atom 23 4 'Structure model' chem_comp_bond 24 4 'Structure model' database_2 25 4 'Structure model' pdbx_initial_refinement_model 26 4 'Structure model' struct_conn 27 4 'Structure model' struct_sheet # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_citation.country' 6 2 'Structure model' '_citation.journal_abbrev' 7 2 'Structure model' '_citation.journal_id_CSD' 8 2 'Structure model' '_citation.journal_id_ISSN' 9 2 'Structure model' '_citation.journal_volume' 10 2 'Structure model' '_citation.page_first' 11 2 'Structure model' '_citation.page_last' 12 2 'Structure model' '_citation.pdbx_database_id_DOI' 13 2 'Structure model' '_citation.pdbx_database_id_PubMed' 14 2 'Structure model' '_citation.title' 15 2 'Structure model' '_citation.year' 16 3 'Structure model' '_atom_site.B_iso_or_equiv' 17 3 'Structure model' '_atom_site.Cartn_x' 18 3 'Structure model' '_atom_site.Cartn_y' 19 3 'Structure model' '_atom_site.Cartn_z' 20 3 'Structure model' '_atom_site.auth_asym_id' 21 3 'Structure model' '_atom_site.auth_atom_id' 22 3 'Structure model' '_atom_site.auth_comp_id' 23 3 'Structure model' '_atom_site.auth_seq_id' 24 3 'Structure model' '_atom_site.label_asym_id' 25 3 'Structure model' '_atom_site.label_atom_id' 26 3 'Structure model' '_atom_site.label_comp_id' 27 3 'Structure model' '_atom_site.label_entity_id' 28 3 'Structure model' '_atom_site.type_symbol' 29 3 'Structure model' '_chem_comp.name' 30 3 'Structure model' '_chem_comp.type' 31 3 'Structure model' '_pdbx_database_status.status_code_sf' 32 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 33 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 34 3 'Structure model' '_struct_conn.pdbx_role' 35 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 36 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 37 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 38 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 39 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 40 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 41 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 42 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 43 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 44 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 45 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 46 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 47 4 'Structure model' '_chem_comp.pdbx_synonyms' 48 4 'Structure model' '_database_2.pdbx_DOI' 49 4 'Structure model' '_database_2.pdbx_database_accession' 50 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 51 4 'Structure model' '_struct_sheet.number_strands' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BUSTER refinement 2.11.4 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. ; # _pdbx_entry_details.entry_id 4BOE _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;RESIDUES 1-24 OF THE UNIPROT ENTRY ARE A LEADER SECRETION SEQUENCE GGHHHHHH AT THE CTERM ARE FROM HIS-TAGGING ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 H2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2001 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.50 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 H1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 THR _pdbx_validate_symm_contact.auth_seq_id_1 1 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 2088 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_555 _pdbx_validate_symm_contact.dist 1.48 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 125 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -161.79 _pdbx_validate_torsion.psi 100.41 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 155 ? A HIS 155 2 1 Y 1 A HIS 156 ? A HIS 156 3 1 Y 1 A HIS 157 ? A HIS 157 4 1 Y 1 A HIS 158 ? A HIS 158 5 1 Y 1 A HIS 159 ? A HIS 159 6 1 Y 1 A HIS 160 ? A HIS 160 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CLR C1 C N N 74 CLR C2 C N N 75 CLR C3 C N S 76 CLR C4 C N N 77 CLR C5 C N N 78 CLR C6 C N N 79 CLR C7 C N N 80 CLR C8 C N S 81 CLR C9 C N S 82 CLR C10 C N R 83 CLR C11 C N N 84 CLR C12 C N N 85 CLR C13 C N R 86 CLR C14 C N S 87 CLR C15 C N N 88 CLR C16 C N N 89 CLR C17 C N R 90 CLR C18 C N N 91 CLR C19 C N N 92 CLR C20 C N R 93 CLR C21 C N N 94 CLR C22 C N N 95 CLR C23 C N N 96 CLR C24 C N N 97 CLR C25 C N N 98 CLR C26 C N N 99 CLR C27 C N N 100 CLR O1 O N N 101 CLR H11 H N N 102 CLR H12 H N N 103 CLR H21 H N N 104 CLR H22 H N N 105 CLR H3 H N N 106 CLR H41 H N N 107 CLR H42 H N N 108 CLR H6 H N N 109 CLR H71 H N N 110 CLR H72 H N N 111 CLR H8 H N N 112 CLR H9 H N N 113 CLR H111 H N N 114 CLR H112 H N N 115 CLR H121 H N N 116 CLR H122 H N N 117 CLR H14 H N N 118 CLR H151 H N N 119 CLR H152 H N N 120 CLR H161 H N N 121 CLR H162 H N N 122 CLR H17 H N N 123 CLR H181 H N N 124 CLR H182 H N N 125 CLR H183 H N N 126 CLR H191 H N N 127 CLR H192 H N N 128 CLR H193 H N N 129 CLR H20 H N N 130 CLR H211 H N N 131 CLR H212 H N N 132 CLR H213 H N N 133 CLR H221 H N N 134 CLR H222 H N N 135 CLR H231 H N N 136 CLR H232 H N N 137 CLR H241 H N N 138 CLR H242 H N N 139 CLR H25 H N N 140 CLR H261 H N N 141 CLR H262 H N N 142 CLR H263 H N N 143 CLR H271 H N N 144 CLR H272 H N N 145 CLR H273 H N N 146 CLR H1 H N N 147 CYS N N N N 148 CYS CA C N R 149 CYS C C N N 150 CYS O O N N 151 CYS CB C N N 152 CYS SG S N N 153 CYS OXT O N N 154 CYS H H N N 155 CYS H2 H N N 156 CYS HA H N N 157 CYS HB2 H N N 158 CYS HB3 H N N 159 CYS HG H N N 160 CYS HXT H N N 161 FUC C1 C N R 162 FUC C2 C N S 163 FUC C3 C N R 164 FUC C4 C N S 165 FUC C5 C N S 166 FUC C6 C N N 167 FUC O1 O N N 168 FUC O2 O N N 169 FUC O3 O N N 170 FUC O4 O N N 171 FUC O5 O N N 172 FUC H1 H N N 173 FUC H2 H N N 174 FUC H3 H N N 175 FUC H4 H N N 176 FUC H5 H N N 177 FUC H61 H N N 178 FUC H62 H N N 179 FUC H63 H N N 180 FUC HO1 H N N 181 FUC HO2 H N N 182 FUC HO3 H N N 183 FUC HO4 H N N 184 GLN N N N N 185 GLN CA C N S 186 GLN C C N N 187 GLN O O N N 188 GLN CB C N N 189 GLN CG C N N 190 GLN CD C N N 191 GLN OE1 O N N 192 GLN NE2 N N N 193 GLN OXT O N N 194 GLN H H N N 195 GLN H2 H N N 196 GLN HA H N N 197 GLN HB2 H N N 198 GLN HB3 H N N 199 GLN HG2 H N N 200 GLN HG3 H N N 201 GLN HE21 H N N 202 GLN HE22 H N N 203 GLN HXT H N N 204 GLU N N N N 205 GLU CA C N S 206 GLU C C N N 207 GLU O O N N 208 GLU CB C N N 209 GLU CG C N N 210 GLU CD C N N 211 GLU OE1 O N N 212 GLU OE2 O N N 213 GLU OXT O N N 214 GLU H H N N 215 GLU H2 H N N 216 GLU HA H N N 217 GLU HB2 H N N 218 GLU HB3 H N N 219 GLU HG2 H N N 220 GLU HG3 H N N 221 GLU HE2 H N N 222 GLU HXT H N N 223 GLY N N N N 224 GLY CA C N N 225 GLY C C N N 226 GLY O O N N 227 GLY OXT O N N 228 GLY H H N N 229 GLY H2 H N N 230 GLY HA2 H N N 231 GLY HA3 H N N 232 GLY HXT H N N 233 HIS N N N N 234 HIS CA C N S 235 HIS C C N N 236 HIS O O N N 237 HIS CB C N N 238 HIS CG C Y N 239 HIS ND1 N Y N 240 HIS CD2 C Y N 241 HIS CE1 C Y N 242 HIS NE2 N Y N 243 HIS OXT O N N 244 HIS H H N N 245 HIS H2 H N N 246 HIS HA H N N 247 HIS HB2 H N N 248 HIS HB3 H N N 249 HIS HD1 H N N 250 HIS HD2 H N N 251 HIS HE1 H N N 252 HIS HE2 H N N 253 HIS HXT H N N 254 HOH O O N N 255 HOH H1 H N N 256 HOH H2 H N N 257 ILE N N N N 258 ILE CA C N S 259 ILE C C N N 260 ILE O O N N 261 ILE CB C N S 262 ILE CG1 C N N 263 ILE CG2 C N N 264 ILE CD1 C N N 265 ILE OXT O N N 266 ILE H H N N 267 ILE H2 H N N 268 ILE HA H N N 269 ILE HB H N N 270 ILE HG12 H N N 271 ILE HG13 H N N 272 ILE HG21 H N N 273 ILE HG22 H N N 274 ILE HG23 H N N 275 ILE HD11 H N N 276 ILE HD12 H N N 277 ILE HD13 H N N 278 ILE HXT H N N 279 IMD N1 N Y N 280 IMD C2 C Y N 281 IMD N3 N Y N 282 IMD C4 C Y N 283 IMD C5 C Y N 284 IMD HN1 H N N 285 IMD H2 H N N 286 IMD HN3 H N N 287 IMD H4 H N N 288 IMD H5 H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MAN C1 C N S 337 MAN C2 C N S 338 MAN C3 C N S 339 MAN C4 C N S 340 MAN C5 C N R 341 MAN C6 C N N 342 MAN O1 O N N 343 MAN O2 O N N 344 MAN O3 O N N 345 MAN O4 O N N 346 MAN O5 O N N 347 MAN O6 O N N 348 MAN H1 H N N 349 MAN H2 H N N 350 MAN H3 H N N 351 MAN H4 H N N 352 MAN H5 H N N 353 MAN H61 H N N 354 MAN H62 H N N 355 MAN HO1 H N N 356 MAN HO2 H N N 357 MAN HO3 H N N 358 MAN HO4 H N N 359 MAN HO6 H N N 360 MET N N N N 361 MET CA C N S 362 MET C C N N 363 MET O O N N 364 MET CB C N N 365 MET CG C N N 366 MET SD S N N 367 MET CE C N N 368 MET OXT O N N 369 MET H H N N 370 MET H2 H N N 371 MET HA H N N 372 MET HB2 H N N 373 MET HB3 H N N 374 MET HG2 H N N 375 MET HG3 H N N 376 MET HE1 H N N 377 MET HE2 H N N 378 MET HE3 H N N 379 MET HXT H N N 380 MPD C1 C N N 381 MPD C2 C N N 382 MPD O2 O N N 383 MPD CM C N N 384 MPD C3 C N N 385 MPD C4 C N S 386 MPD O4 O N N 387 MPD C5 C N N 388 MPD H11 H N N 389 MPD H12 H N N 390 MPD H13 H N N 391 MPD HO2 H N N 392 MPD HM1 H N N 393 MPD HM2 H N N 394 MPD HM3 H N N 395 MPD H31 H N N 396 MPD H32 H N N 397 MPD H4 H N N 398 MPD HO4 H N N 399 MPD H51 H N N 400 MPD H52 H N N 401 MPD H53 H N N 402 NAG C1 C N R 403 NAG C2 C N R 404 NAG C3 C N R 405 NAG C4 C N S 406 NAG C5 C N R 407 NAG C6 C N N 408 NAG C7 C N N 409 NAG C8 C N N 410 NAG N2 N N N 411 NAG O1 O N N 412 NAG O3 O N N 413 NAG O4 O N N 414 NAG O5 O N N 415 NAG O6 O N N 416 NAG O7 O N N 417 NAG H1 H N N 418 NAG H2 H N N 419 NAG H3 H N N 420 NAG H4 H N N 421 NAG H5 H N N 422 NAG H61 H N N 423 NAG H62 H N N 424 NAG H81 H N N 425 NAG H82 H N N 426 NAG H83 H N N 427 NAG HN2 H N N 428 NAG HO1 H N N 429 NAG HO3 H N N 430 NAG HO4 H N N 431 NAG HO6 H N N 432 PHE N N N N 433 PHE CA C N S 434 PHE C C N N 435 PHE O O N N 436 PHE CB C N N 437 PHE CG C Y N 438 PHE CD1 C Y N 439 PHE CD2 C Y N 440 PHE CE1 C Y N 441 PHE CE2 C Y N 442 PHE CZ C Y N 443 PHE OXT O N N 444 PHE H H N N 445 PHE H2 H N N 446 PHE HA H N N 447 PHE HB2 H N N 448 PHE HB3 H N N 449 PHE HD1 H N N 450 PHE HD2 H N N 451 PHE HE1 H N N 452 PHE HE2 H N N 453 PHE HZ H N N 454 PHE HXT H N N 455 PRO N N N N 456 PRO CA C N S 457 PRO C C N N 458 PRO O O N N 459 PRO CB C N N 460 PRO CG C N N 461 PRO CD C N N 462 PRO OXT O N N 463 PRO H H N N 464 PRO HA H N N 465 PRO HB2 H N N 466 PRO HB3 H N N 467 PRO HG2 H N N 468 PRO HG3 H N N 469 PRO HD2 H N N 470 PRO HD3 H N N 471 PRO HXT H N N 472 SER N N N N 473 SER CA C N S 474 SER C C N N 475 SER O O N N 476 SER CB C N N 477 SER OG O N N 478 SER OXT O N N 479 SER H H N N 480 SER H2 H N N 481 SER HA H N N 482 SER HB2 H N N 483 SER HB3 H N N 484 SER HG H N N 485 SER HXT H N N 486 THR N N N N 487 THR CA C N S 488 THR C C N N 489 THR O O N N 490 THR CB C N R 491 THR OG1 O N N 492 THR CG2 C N N 493 THR OXT O N N 494 THR H H N N 495 THR H2 H N N 496 THR HA H N N 497 THR HB H N N 498 THR HG1 H N N 499 THR HG21 H N N 500 THR HG22 H N N 501 THR HG23 H N N 502 THR HXT H N N 503 TRP N N N N 504 TRP CA C N S 505 TRP C C N N 506 TRP O O N N 507 TRP CB C N N 508 TRP CG C Y N 509 TRP CD1 C Y N 510 TRP CD2 C Y N 511 TRP NE1 N Y N 512 TRP CE2 C Y N 513 TRP CE3 C Y N 514 TRP CZ2 C Y N 515 TRP CZ3 C Y N 516 TRP CH2 C Y N 517 TRP OXT O N N 518 TRP H H N N 519 TRP H2 H N N 520 TRP HA H N N 521 TRP HB2 H N N 522 TRP HB3 H N N 523 TRP HD1 H N N 524 TRP HE1 H N N 525 TRP HE3 H N N 526 TRP HZ2 H N N 527 TRP HZ3 H N N 528 TRP HH2 H N N 529 TRP HXT H N N 530 TYR N N N N 531 TYR CA C N S 532 TYR C C N N 533 TYR O O N N 534 TYR CB C N N 535 TYR CG C Y N 536 TYR CD1 C Y N 537 TYR CD2 C Y N 538 TYR CE1 C Y N 539 TYR CE2 C Y N 540 TYR CZ C Y N 541 TYR OH O N N 542 TYR OXT O N N 543 TYR H H N N 544 TYR H2 H N N 545 TYR HA H N N 546 TYR HB2 H N N 547 TYR HB3 H N N 548 TYR HD1 H N N 549 TYR HD2 H N N 550 TYR HE1 H N N 551 TYR HE2 H N N 552 TYR HH H N N 553 TYR HXT H N N 554 VAL N N N N 555 VAL CA C N S 556 VAL C C N N 557 VAL O O N N 558 VAL CB C N N 559 VAL CG1 C N N 560 VAL CG2 C N N 561 VAL OXT O N N 562 VAL H H N N 563 VAL H2 H N N 564 VAL HA H N N 565 VAL HB H N N 566 VAL HG11 H N N 567 VAL HG12 H N N 568 VAL HG13 H N N 569 VAL HG21 H N N 570 VAL HG22 H N N 571 VAL HG23 H N N 572 VAL HXT H N N 573 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CLR C1 C2 sing N N 70 CLR C1 C10 sing N N 71 CLR C1 H11 sing N N 72 CLR C1 H12 sing N N 73 CLR C2 C3 sing N N 74 CLR C2 H21 sing N N 75 CLR C2 H22 sing N N 76 CLR C3 C4 sing N N 77 CLR C3 O1 sing N N 78 CLR C3 H3 sing N N 79 CLR C4 C5 sing N N 80 CLR C4 H41 sing N N 81 CLR C4 H42 sing N N 82 CLR C5 C6 doub N N 83 CLR C5 C10 sing N N 84 CLR C6 C7 sing N N 85 CLR C6 H6 sing N N 86 CLR C7 C8 sing N N 87 CLR C7 H71 sing N N 88 CLR C7 H72 sing N N 89 CLR C8 C9 sing N N 90 CLR C8 C14 sing N N 91 CLR C8 H8 sing N N 92 CLR C9 C10 sing N N 93 CLR C9 C11 sing N N 94 CLR C9 H9 sing N N 95 CLR C10 C19 sing N N 96 CLR C11 C12 sing N N 97 CLR C11 H111 sing N N 98 CLR C11 H112 sing N N 99 CLR C12 C13 sing N N 100 CLR C12 H121 sing N N 101 CLR C12 H122 sing N N 102 CLR C13 C14 sing N N 103 CLR C13 C17 sing N N 104 CLR C13 C18 sing N N 105 CLR C14 C15 sing N N 106 CLR C14 H14 sing N N 107 CLR C15 C16 sing N N 108 CLR C15 H151 sing N N 109 CLR C15 H152 sing N N 110 CLR C16 C17 sing N N 111 CLR C16 H161 sing N N 112 CLR C16 H162 sing N N 113 CLR C17 C20 sing N N 114 CLR C17 H17 sing N N 115 CLR C18 H181 sing N N 116 CLR C18 H182 sing N N 117 CLR C18 H183 sing N N 118 CLR C19 H191 sing N N 119 CLR C19 H192 sing N N 120 CLR C19 H193 sing N N 121 CLR C20 C21 sing N N 122 CLR C20 C22 sing N N 123 CLR C20 H20 sing N N 124 CLR C21 H211 sing N N 125 CLR C21 H212 sing N N 126 CLR C21 H213 sing N N 127 CLR C22 C23 sing N N 128 CLR C22 H221 sing N N 129 CLR C22 H222 sing N N 130 CLR C23 C24 sing N N 131 CLR C23 H231 sing N N 132 CLR C23 H232 sing N N 133 CLR C24 C25 sing N N 134 CLR C24 H241 sing N N 135 CLR C24 H242 sing N N 136 CLR C25 C26 sing N N 137 CLR C25 C27 sing N N 138 CLR C25 H25 sing N N 139 CLR C26 H261 sing N N 140 CLR C26 H262 sing N N 141 CLR C26 H263 sing N N 142 CLR C27 H271 sing N N 143 CLR C27 H272 sing N N 144 CLR C27 H273 sing N N 145 CLR O1 H1 sing N N 146 CYS N CA sing N N 147 CYS N H sing N N 148 CYS N H2 sing N N 149 CYS CA C sing N N 150 CYS CA CB sing N N 151 CYS CA HA sing N N 152 CYS C O doub N N 153 CYS C OXT sing N N 154 CYS CB SG sing N N 155 CYS CB HB2 sing N N 156 CYS CB HB3 sing N N 157 CYS SG HG sing N N 158 CYS OXT HXT sing N N 159 FUC C1 C2 sing N N 160 FUC C1 O1 sing N N 161 FUC C1 O5 sing N N 162 FUC C1 H1 sing N N 163 FUC C2 C3 sing N N 164 FUC C2 O2 sing N N 165 FUC C2 H2 sing N N 166 FUC C3 C4 sing N N 167 FUC C3 O3 sing N N 168 FUC C3 H3 sing N N 169 FUC C4 C5 sing N N 170 FUC C4 O4 sing N N 171 FUC C4 H4 sing N N 172 FUC C5 C6 sing N N 173 FUC C5 O5 sing N N 174 FUC C5 H5 sing N N 175 FUC C6 H61 sing N N 176 FUC C6 H62 sing N N 177 FUC C6 H63 sing N N 178 FUC O1 HO1 sing N N 179 FUC O2 HO2 sing N N 180 FUC O3 HO3 sing N N 181 FUC O4 HO4 sing N N 182 GLN N CA sing N N 183 GLN N H sing N N 184 GLN N H2 sing N N 185 GLN CA C sing N N 186 GLN CA CB sing N N 187 GLN CA HA sing N N 188 GLN C O doub N N 189 GLN C OXT sing N N 190 GLN CB CG sing N N 191 GLN CB HB2 sing N N 192 GLN CB HB3 sing N N 193 GLN CG CD sing N N 194 GLN CG HG2 sing N N 195 GLN CG HG3 sing N N 196 GLN CD OE1 doub N N 197 GLN CD NE2 sing N N 198 GLN NE2 HE21 sing N N 199 GLN NE2 HE22 sing N N 200 GLN OXT HXT sing N N 201 GLU N CA sing N N 202 GLU N H sing N N 203 GLU N H2 sing N N 204 GLU CA C sing N N 205 GLU CA CB sing N N 206 GLU CA HA sing N N 207 GLU C O doub N N 208 GLU C OXT sing N N 209 GLU CB CG sing N N 210 GLU CB HB2 sing N N 211 GLU CB HB3 sing N N 212 GLU CG CD sing N N 213 GLU CG HG2 sing N N 214 GLU CG HG3 sing N N 215 GLU CD OE1 doub N N 216 GLU CD OE2 sing N N 217 GLU OE2 HE2 sing N N 218 GLU OXT HXT sing N N 219 GLY N CA sing N N 220 GLY N H sing N N 221 GLY N H2 sing N N 222 GLY CA C sing N N 223 GLY CA HA2 sing N N 224 GLY CA HA3 sing N N 225 GLY C O doub N N 226 GLY C OXT sing N N 227 GLY OXT HXT sing N N 228 HIS N CA sing N N 229 HIS N H sing N N 230 HIS N H2 sing N N 231 HIS CA C sing N N 232 HIS CA CB sing N N 233 HIS CA HA sing N N 234 HIS C O doub N N 235 HIS C OXT sing N N 236 HIS CB CG sing N N 237 HIS CB HB2 sing N N 238 HIS CB HB3 sing N N 239 HIS CG ND1 sing Y N 240 HIS CG CD2 doub Y N 241 HIS ND1 CE1 doub Y N 242 HIS ND1 HD1 sing N N 243 HIS CD2 NE2 sing Y N 244 HIS CD2 HD2 sing N N 245 HIS CE1 NE2 sing Y N 246 HIS CE1 HE1 sing N N 247 HIS NE2 HE2 sing N N 248 HIS OXT HXT sing N N 249 HOH O H1 sing N N 250 HOH O H2 sing N N 251 ILE N CA sing N N 252 ILE N H sing N N 253 ILE N H2 sing N N 254 ILE CA C sing N N 255 ILE CA CB sing N N 256 ILE CA HA sing N N 257 ILE C O doub N N 258 ILE C OXT sing N N 259 ILE CB CG1 sing N N 260 ILE CB CG2 sing N N 261 ILE CB HB sing N N 262 ILE CG1 CD1 sing N N 263 ILE CG1 HG12 sing N N 264 ILE CG1 HG13 sing N N 265 ILE CG2 HG21 sing N N 266 ILE CG2 HG22 sing N N 267 ILE CG2 HG23 sing N N 268 ILE CD1 HD11 sing N N 269 ILE CD1 HD12 sing N N 270 ILE CD1 HD13 sing N N 271 ILE OXT HXT sing N N 272 IMD N1 C2 sing Y N 273 IMD N1 C5 sing Y N 274 IMD N1 HN1 sing N N 275 IMD C2 N3 doub Y N 276 IMD C2 H2 sing N N 277 IMD N3 C4 sing Y N 278 IMD N3 HN3 sing N N 279 IMD C4 C5 doub Y N 280 IMD C4 H4 sing N N 281 IMD C5 H5 sing N N 282 LEU N CA sing N N 283 LEU N H sing N N 284 LEU N H2 sing N N 285 LEU CA C sing N N 286 LEU CA CB sing N N 287 LEU CA HA sing N N 288 LEU C O doub N N 289 LEU C OXT sing N N 290 LEU CB CG sing N N 291 LEU CB HB2 sing N N 292 LEU CB HB3 sing N N 293 LEU CG CD1 sing N N 294 LEU CG CD2 sing N N 295 LEU CG HG sing N N 296 LEU CD1 HD11 sing N N 297 LEU CD1 HD12 sing N N 298 LEU CD1 HD13 sing N N 299 LEU CD2 HD21 sing N N 300 LEU CD2 HD22 sing N N 301 LEU CD2 HD23 sing N N 302 LEU OXT HXT sing N N 303 LYS N CA sing N N 304 LYS N H sing N N 305 LYS N H2 sing N N 306 LYS CA C sing N N 307 LYS CA CB sing N N 308 LYS CA HA sing N N 309 LYS C O doub N N 310 LYS C OXT sing N N 311 LYS CB CG sing N N 312 LYS CB HB2 sing N N 313 LYS CB HB3 sing N N 314 LYS CG CD sing N N 315 LYS CG HG2 sing N N 316 LYS CG HG3 sing N N 317 LYS CD CE sing N N 318 LYS CD HD2 sing N N 319 LYS CD HD3 sing N N 320 LYS CE NZ sing N N 321 LYS CE HE2 sing N N 322 LYS CE HE3 sing N N 323 LYS NZ HZ1 sing N N 324 LYS NZ HZ2 sing N N 325 LYS NZ HZ3 sing N N 326 LYS OXT HXT sing N N 327 MAN C1 C2 sing N N 328 MAN C1 O1 sing N N 329 MAN C1 O5 sing N N 330 MAN C1 H1 sing N N 331 MAN C2 C3 sing N N 332 MAN C2 O2 sing N N 333 MAN C2 H2 sing N N 334 MAN C3 C4 sing N N 335 MAN C3 O3 sing N N 336 MAN C3 H3 sing N N 337 MAN C4 C5 sing N N 338 MAN C4 O4 sing N N 339 MAN C4 H4 sing N N 340 MAN C5 C6 sing N N 341 MAN C5 O5 sing N N 342 MAN C5 H5 sing N N 343 MAN C6 O6 sing N N 344 MAN C6 H61 sing N N 345 MAN C6 H62 sing N N 346 MAN O1 HO1 sing N N 347 MAN O2 HO2 sing N N 348 MAN O3 HO3 sing N N 349 MAN O4 HO4 sing N N 350 MAN O6 HO6 sing N N 351 MET N CA sing N N 352 MET N H sing N N 353 MET N H2 sing N N 354 MET CA C sing N N 355 MET CA CB sing N N 356 MET CA HA sing N N 357 MET C O doub N N 358 MET C OXT sing N N 359 MET CB CG sing N N 360 MET CB HB2 sing N N 361 MET CB HB3 sing N N 362 MET CG SD sing N N 363 MET CG HG2 sing N N 364 MET CG HG3 sing N N 365 MET SD CE sing N N 366 MET CE HE1 sing N N 367 MET CE HE2 sing N N 368 MET CE HE3 sing N N 369 MET OXT HXT sing N N 370 MPD C1 C2 sing N N 371 MPD C1 H11 sing N N 372 MPD C1 H12 sing N N 373 MPD C1 H13 sing N N 374 MPD C2 O2 sing N N 375 MPD C2 CM sing N N 376 MPD C2 C3 sing N N 377 MPD O2 HO2 sing N N 378 MPD CM HM1 sing N N 379 MPD CM HM2 sing N N 380 MPD CM HM3 sing N N 381 MPD C3 C4 sing N N 382 MPD C3 H31 sing N N 383 MPD C3 H32 sing N N 384 MPD C4 O4 sing N N 385 MPD C4 C5 sing N N 386 MPD C4 H4 sing N N 387 MPD O4 HO4 sing N N 388 MPD C5 H51 sing N N 389 MPD C5 H52 sing N N 390 MPD C5 H53 sing N N 391 NAG C1 C2 sing N N 392 NAG C1 O1 sing N N 393 NAG C1 O5 sing N N 394 NAG C1 H1 sing N N 395 NAG C2 C3 sing N N 396 NAG C2 N2 sing N N 397 NAG C2 H2 sing N N 398 NAG C3 C4 sing N N 399 NAG C3 O3 sing N N 400 NAG C3 H3 sing N N 401 NAG C4 C5 sing N N 402 NAG C4 O4 sing N N 403 NAG C4 H4 sing N N 404 NAG C5 C6 sing N N 405 NAG C5 O5 sing N N 406 NAG C5 H5 sing N N 407 NAG C6 O6 sing N N 408 NAG C6 H61 sing N N 409 NAG C6 H62 sing N N 410 NAG C7 C8 sing N N 411 NAG C7 N2 sing N N 412 NAG C7 O7 doub N N 413 NAG C8 H81 sing N N 414 NAG C8 H82 sing N N 415 NAG C8 H83 sing N N 416 NAG N2 HN2 sing N N 417 NAG O1 HO1 sing N N 418 NAG O3 HO3 sing N N 419 NAG O4 HO4 sing N N 420 NAG O6 HO6 sing N N 421 PHE N CA sing N N 422 PHE N H sing N N 423 PHE N H2 sing N N 424 PHE CA C sing N N 425 PHE CA CB sing N N 426 PHE CA HA sing N N 427 PHE C O doub N N 428 PHE C OXT sing N N 429 PHE CB CG sing N N 430 PHE CB HB2 sing N N 431 PHE CB HB3 sing N N 432 PHE CG CD1 doub Y N 433 PHE CG CD2 sing Y N 434 PHE CD1 CE1 sing Y N 435 PHE CD1 HD1 sing N N 436 PHE CD2 CE2 doub Y N 437 PHE CD2 HD2 sing N N 438 PHE CE1 CZ doub Y N 439 PHE CE1 HE1 sing N N 440 PHE CE2 CZ sing Y N 441 PHE CE2 HE2 sing N N 442 PHE CZ HZ sing N N 443 PHE OXT HXT sing N N 444 PRO N CA sing N N 445 PRO N CD sing N N 446 PRO N H sing N N 447 PRO CA C sing N N 448 PRO CA CB sing N N 449 PRO CA HA sing N N 450 PRO C O doub N N 451 PRO C OXT sing N N 452 PRO CB CG sing N N 453 PRO CB HB2 sing N N 454 PRO CB HB3 sing N N 455 PRO CG CD sing N N 456 PRO CG HG2 sing N N 457 PRO CG HG3 sing N N 458 PRO CD HD2 sing N N 459 PRO CD HD3 sing N N 460 PRO OXT HXT sing N N 461 SER N CA sing N N 462 SER N H sing N N 463 SER N H2 sing N N 464 SER CA C sing N N 465 SER CA CB sing N N 466 SER CA HA sing N N 467 SER C O doub N N 468 SER C OXT sing N N 469 SER CB OG sing N N 470 SER CB HB2 sing N N 471 SER CB HB3 sing N N 472 SER OG HG sing N N 473 SER OXT HXT sing N N 474 THR N CA sing N N 475 THR N H sing N N 476 THR N H2 sing N N 477 THR CA C sing N N 478 THR CA CB sing N N 479 THR CA HA sing N N 480 THR C O doub N N 481 THR C OXT sing N N 482 THR CB OG1 sing N N 483 THR CB CG2 sing N N 484 THR CB HB sing N N 485 THR OG1 HG1 sing N N 486 THR CG2 HG21 sing N N 487 THR CG2 HG22 sing N N 488 THR CG2 HG23 sing N N 489 THR OXT HXT sing N N 490 TRP N CA sing N N 491 TRP N H sing N N 492 TRP N H2 sing N N 493 TRP CA C sing N N 494 TRP CA CB sing N N 495 TRP CA HA sing N N 496 TRP C O doub N N 497 TRP C OXT sing N N 498 TRP CB CG sing N N 499 TRP CB HB2 sing N N 500 TRP CB HB3 sing N N 501 TRP CG CD1 doub Y N 502 TRP CG CD2 sing Y N 503 TRP CD1 NE1 sing Y N 504 TRP CD1 HD1 sing N N 505 TRP CD2 CE2 doub Y N 506 TRP CD2 CE3 sing Y N 507 TRP NE1 CE2 sing Y N 508 TRP NE1 HE1 sing N N 509 TRP CE2 CZ2 sing Y N 510 TRP CE3 CZ3 doub Y N 511 TRP CE3 HE3 sing N N 512 TRP CZ2 CH2 doub Y N 513 TRP CZ2 HZ2 sing N N 514 TRP CZ3 CH2 sing Y N 515 TRP CZ3 HZ3 sing N N 516 TRP CH2 HH2 sing N N 517 TRP OXT HXT sing N N 518 TYR N CA sing N N 519 TYR N H sing N N 520 TYR N H2 sing N N 521 TYR CA C sing N N 522 TYR CA CB sing N N 523 TYR CA HA sing N N 524 TYR C O doub N N 525 TYR C OXT sing N N 526 TYR CB CG sing N N 527 TYR CB HB2 sing N N 528 TYR CB HB3 sing N N 529 TYR CG CD1 doub Y N 530 TYR CG CD2 sing Y N 531 TYR CD1 CE1 sing Y N 532 TYR CD1 HD1 sing N N 533 TYR CD2 CE2 doub Y N 534 TYR CD2 HD2 sing N N 535 TYR CE1 CZ doub Y N 536 TYR CE1 HE1 sing N N 537 TYR CE2 CZ sing Y N 538 TYR CE2 HE2 sing N N 539 TYR CZ OH sing N N 540 TYR OH HH sing N N 541 TYR OXT HXT sing N N 542 VAL N CA sing N N 543 VAL N H sing N N 544 VAL N H2 sing N N 545 VAL CA C sing N N 546 VAL CA CB sing N N 547 VAL CA HA sing N N 548 VAL C O doub N N 549 VAL C OXT sing N N 550 VAL CB CG1 sing N N 551 VAL CB CG2 sing N N 552 VAL CB HB sing N N 553 VAL CG1 HG11 sing N N 554 VAL CG1 HG12 sing N N 555 VAL CG1 HG13 sing N N 556 VAL CG2 HG21 sing N N 557 VAL CG2 HG22 sing N N 558 VAL CG2 HG23 sing N N 559 VAL OXT HXT sing N N 560 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1131 n B 2 NAG 2 B NAG 2 A NAG 1133 n B 2 MAN 3 B MAN 3 A MAN 1134 n B 2 FUC 4 B FUC 4 A FUC 1132 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3/a4-b1_a6-d1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 MAN C1 O1 2 NAG O4 HO4 sing ? 3 2 4 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 MAN 3 n 2 FUC 4 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 CHOLESTEROL CLR 4 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 5 IMIDAZOLE IMD 6 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1QFT _pdbx_initial_refinement_model.details 'PDB ENTRY 1QFT' #