data_4BP2 # _entry.id 4BP2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4BP2 WWPDB D_1000179271 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2BP2 _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'preliminary model' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4BP2 _pdbx_database_status.recvd_initial_deposition_date 1990-09-07 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Finzel, B.C.' 1 'Weber, P.C.' 2 'Ohlendorf, D.H.' 3 'Salemme, F.R.' 4 # _citation.id primary _citation.title 'Crystallographic refinement of bovine pro-phospholipase A2 at 1.6 A resolution.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.B' _citation.journal_volume 47 _citation.page_first 814 _citation.page_last 816 _citation.year 1991 _citation.journal_id_ASTM ASBSDK _citation.country DK _citation.journal_id_ISSN 0108-7681 _citation.journal_id_CSD 0622 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 1793547 _citation.pdbx_database_id_DOI 10.1107/S0108768191004226 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Finzel, B.C.' 1 primary 'Weber, P.C.' 2 primary 'Ohlendorf, D.H.' 3 primary 'Salemme, F.R.' 4 # _cell.entry_id 4BP2 _cell.length_a 46.950 _cell.length_b 46.950 _cell.length_c 102.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4BP2 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PHOSPHOLIPASE A2' 14538.293 1 3.1.1.4 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 2 ? ? ? ? 4 water nat water 18.015 60 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QAGLNSRALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNNY SYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDKKNC ; _entity_poly.pdbx_seq_one_letter_code_can ;QAGLNSRALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNNY SYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDKKNC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ALA n 1 3 GLY n 1 4 LEU n 1 5 ASN n 1 6 SER n 1 7 ARG n 1 8 ALA n 1 9 LEU n 1 10 TRP n 1 11 GLN n 1 12 PHE n 1 13 ASN n 1 14 GLY n 1 15 MET n 1 16 ILE n 1 17 LYS n 1 18 CYS n 1 19 LYS n 1 20 ILE n 1 21 PRO n 1 22 SER n 1 23 SER n 1 24 GLU n 1 25 PRO n 1 26 LEU n 1 27 LEU n 1 28 ASP n 1 29 PHE n 1 30 ASN n 1 31 ASN n 1 32 TYR n 1 33 GLY n 1 34 CYS n 1 35 TYR n 1 36 CYS n 1 37 GLY n 1 38 LEU n 1 39 GLY n 1 40 GLY n 1 41 SER n 1 42 GLY n 1 43 THR n 1 44 PRO n 1 45 VAL n 1 46 ASP n 1 47 ASP n 1 48 LEU n 1 49 ASP n 1 50 ARG n 1 51 CYS n 1 52 CYS n 1 53 GLN n 1 54 THR n 1 55 HIS n 1 56 ASP n 1 57 ASN n 1 58 CYS n 1 59 TYR n 1 60 LYS n 1 61 GLN n 1 62 ALA n 1 63 LYS n 1 64 LYS n 1 65 LEU n 1 66 ASP n 1 67 SER n 1 68 CYS n 1 69 LYS n 1 70 VAL n 1 71 LEU n 1 72 VAL n 1 73 ASP n 1 74 ASN n 1 75 PRO n 1 76 TYR n 1 77 THR n 1 78 ASN n 1 79 ASN n 1 80 TYR n 1 81 SER n 1 82 TYR n 1 83 SER n 1 84 CYS n 1 85 SER n 1 86 ASN n 1 87 ASN n 1 88 GLU n 1 89 ILE n 1 90 THR n 1 91 CYS n 1 92 SER n 1 93 SER n 1 94 GLU n 1 95 ASN n 1 96 ASN n 1 97 ALA n 1 98 CYS n 1 99 GLU n 1 100 ALA n 1 101 PHE n 1 102 ILE n 1 103 CYS n 1 104 ASN n 1 105 CYS n 1 106 ASP n 1 107 ARG n 1 108 ASN n 1 109 ALA n 1 110 ALA n 1 111 ILE n 1 112 CYS n 1 113 PHE n 1 114 SER n 1 115 LYS n 1 116 VAL n 1 117 PRO n 1 118 TYR n 1 119 ASN n 1 120 LYS n 1 121 GLU n 1 122 HIS n 1 123 LYS n 1 124 ASN n 1 125 LEU n 1 126 ASP n 1 127 LYS n 1 128 LYS n 1 129 ASN n 1 130 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name cattle _entity_src_gen.gene_src_genus Bos _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PA21B_BOVIN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00593 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MRLLVLAALLTVGAGQAGLNSRALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKL DSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDKKNC ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4BP2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 130 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00593 _struct_ref_seq.db_align_beg 16 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 145 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -6 _struct_ref_seq.pdbx_auth_seq_align_end 123 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4BP2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_percent_sol 44.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 4BP2 _refine.ls_number_reflns_obs 14100 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 5.0 _refine.ls_d_res_high 1.6 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.19 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;ELECTRON DENSITY IS POOR FOR RESIDUES ALA 1, LEU 2, TRP 3, CYS 61, LYS 62, VAL 63, LEU 64, ASN 71 AND ASN 72 AND THE COORDINATES FOR THESE REGIONS SHOULD NOT BE CONSIDERED RELIABLE. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 895 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 76 _refine_hist.number_atoms_total 972 _refine_hist.d_res_high 1.6 _refine_hist.d_res_low 5.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.024 0.030 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.037 0.040 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.047 0.050 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 1.103 1.000 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 1.960 2.000 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 2.046 1.500 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 3.306 3.000 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.017 0.030 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.258 0.300 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.191 0.500 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.210 0.500 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd 0.233 0.500 ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 4BP2 _struct.title 'CRYSTALLOGRAPHIC REFINEMENT OF BOVINE PRO-PHOSPHOLIPASE A2 AT 1.6 ANGSTROMS RESOLUTION' _struct.pdbx_descriptor 'PROPHOSPHOLIPASE A2 (PHOSPHATIDE-2-ACYL HYDROLASE) (E.C.3.1.1.4)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4BP2 _struct_keywords.pdbx_keywords 'CARBOXYLIC ESTER HYDROLASE ZYMOGEN' _struct_keywords.text 'CARBOXYLIC ESTER HYDROLASE ZYMOGEN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A ALA A 8 ? ILE A 20 ? ALA A 1 ILE A 13 1 ? 13 HELX_P HELX_P2 B GLU A 24 ? PHE A 29 ? GLU A 17 PHE A 22 1 ? 6 HELX_P HELX_P3 C ASP A 46 ? LEU A 65 ? ASP A 39 LEU A 58 1 ? 20 HELX_P HELX_P4 D ASN A 96 ? LYS A 115 ? ASN A 89 LYS A 108 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 18 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 11 A CYS 77 1_555 ? ? ? ? ? ? ? 2.056 ? disulf2 disulf ? ? A CYS 34 SG ? ? ? 1_555 A CYS 130 SG ? ? A CYS 27 A CYS 123 1_555 ? ? ? ? ? ? ? 2.022 ? disulf3 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 52 SG ? ? A CYS 29 A CYS 45 1_555 ? ? ? ? ? ? ? 2.039 ? disulf4 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 112 SG ? ? A CYS 44 A CYS 105 1_555 ? ? ? ? ? ? ? 2.030 ? disulf5 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 105 SG ? ? A CYS 51 A CYS 98 1_555 ? ? ? ? ? ? ? 2.023 ? disulf6 disulf ? ? A CYS 68 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 61 A CYS 91 1_555 ? ? ? ? ? ? ? 1.987 ? disulf7 disulf ? ? A CYS 91 SG ? ? ? 1_555 A CYS 103 SG ? ? A CYS 84 A CYS 96 1_555 ? ? ? ? ? ? ? 1.981 ? metalc1 metalc ? ? B CA . CA ? ? ? 1_555 A TYR 35 O ? ? A CA 201 A TYR 28 1_555 ? ? ? ? ? ? ? 2.410 ? metalc2 metalc ? ? B CA . CA ? ? ? 1_555 A GLY 39 O ? ? A CA 201 A GLY 32 1_555 ? ? ? ? ? ? ? 2.403 ? metalc3 metalc ? ? B CA . CA ? ? ? 1_555 A GLY 37 O ? ? A CA 201 A GLY 30 1_555 ? ? ? ? ? ? ? 2.557 ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 201 A HOH 315 1_555 ? ? ? ? ? ? ? 2.586 ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 56 OD1 ? ? A CA 201 A ASP 49 1_555 ? ? ? ? ? ? ? 2.544 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 56 OD2 ? ? A CA 201 A ASP 49 1_555 ? ? ? ? ? ? ? 2.449 ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 201 A HOH 316 1_555 ? ? ? ? ? ? ? 2.396 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id SH1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id SH1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id SH1 1 TYR A 82 ? SER A 85 ? TYR A 75 SER A 78 SH1 2 GLU A 88 ? CYS A 91 ? GLU A 81 CYS A 84 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details CA1 Unknown ? ? ? ? 7 ? AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 201' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MPD A 301' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE MPD A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 CA1 7 TYR A 35 ? TYR A 28 . ? 1_555 ? 2 CA1 7 CYS A 36 ? CYS A 29 . ? 1_555 ? 3 CA1 7 GLY A 37 ? GLY A 30 . ? 1_555 ? 4 CA1 7 LEU A 38 ? LEU A 31 . ? 1_555 ? 5 CA1 7 GLY A 39 ? GLY A 32 . ? 1_555 ? 6 CA1 7 ASP A 56 ? ASP A 49 . ? 1_555 ? 7 CA1 7 CA B . ? CA A 201 . ? 1_555 ? 8 AC1 6 TYR A 35 ? TYR A 28 . ? 1_555 ? 9 AC1 6 GLY A 37 ? GLY A 30 . ? 1_555 ? 10 AC1 6 GLY A 39 ? GLY A 32 . ? 1_555 ? 11 AC1 6 ASP A 56 ? ASP A 49 . ? 1_555 ? 12 AC1 6 HOH E . ? HOH A 315 . ? 1_555 ? 13 AC1 6 HOH E . ? HOH A 316 . ? 1_555 ? 14 AC2 5 LEU A 9 ? LEU A 2 . ? 1_555 ? 15 AC2 5 PHE A 12 ? PHE A 5 . ? 1_555 ? 16 AC2 5 LEU A 26 ? LEU A 19 . ? 1_555 ? 17 AC2 5 PHE A 113 ? PHE A 106 . ? 1_555 ? 18 AC2 5 HOH E . ? HOH A 361 . ? 1_555 ? 19 AC3 2 LEU A 26 ? LEU A 19 . ? 6_666 ? 20 AC3 2 HOH E . ? HOH A 332 . ? 6_666 ? # _database_PDB_matrix.entry_id 4BP2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4BP2 _atom_sites.fract_transf_matrix[1][1] 0.021299 _atom_sites.fract_transf_matrix[1][2] 0.012297 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024594 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009804 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 ;ELECTRON DENSITY IS POOR FOR RESIDUES ALA 1, LEU 2, TRP 3, CYS 61, LYS 62, VAL 63, LEU 64, ASN 71 AND ASN 72 AND THE COORDINATES FOR THESE REGIONS SHOULD NOT BE CONSIDERED RELIABLE. ; 2 'ONLY CALCIUM ION 201 WAS FOUND IN THE PROTEIN.' # loop_ _atom_type.symbol C CA H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 -6 ? ? ? A . n A 1 2 ALA 2 -5 ? ? ? A . n A 1 3 GLY 3 -4 ? ? ? A . n A 1 4 LEU 4 -3 ? ? ? A . n A 1 5 ASN 5 -2 ? ? ? A . n A 1 6 SER 6 -1 ? ? ? A . n A 1 7 ARG 7 0 ? ? ? A . n A 1 8 ALA 8 1 1 ALA ALA A . n A 1 9 LEU 9 2 2 LEU LEU A . n A 1 10 TRP 10 3 3 TRP TRP A . n A 1 11 GLN 11 4 4 GLN GLN A . n A 1 12 PHE 12 5 5 PHE PHE A . n A 1 13 ASN 13 6 6 ASN ASN A . n A 1 14 GLY 14 7 7 GLY GLY A . n A 1 15 MET 15 8 8 MET MET A . n A 1 16 ILE 16 9 9 ILE ILE A . n A 1 17 LYS 17 10 10 LYS LYS A . n A 1 18 CYS 18 11 11 CYS CYS A . n A 1 19 LYS 19 12 12 LYS LYS A . n A 1 20 ILE 20 13 13 ILE ILE A . n A 1 21 PRO 21 14 14 PRO PRO A . n A 1 22 SER 22 15 15 SER SER A . n A 1 23 SER 23 16 16 SER SER A . n A 1 24 GLU 24 17 17 GLU GLU A . n A 1 25 PRO 25 18 18 PRO PRO A . n A 1 26 LEU 26 19 19 LEU LEU A . n A 1 27 LEU 27 20 20 LEU LEU A . n A 1 28 ASP 28 21 21 ASP ASP A . n A 1 29 PHE 29 22 22 PHE PHE A . n A 1 30 ASN 30 23 23 ASN ASN A . n A 1 31 ASN 31 24 24 ASN ASN A . n A 1 32 TYR 32 25 25 TYR TYR A . n A 1 33 GLY 33 26 26 GLY GLY A . n A 1 34 CYS 34 27 27 CYS CYS A . n A 1 35 TYR 35 28 28 TYR TYR A . n A 1 36 CYS 36 29 29 CYS CYS A . n A 1 37 GLY 37 30 30 GLY GLY A . n A 1 38 LEU 38 31 31 LEU LEU A . n A 1 39 GLY 39 32 32 GLY GLY A . n A 1 40 GLY 40 33 33 GLY GLY A . n A 1 41 SER 41 34 34 SER SER A . n A 1 42 GLY 42 35 35 GLY GLY A . n A 1 43 THR 43 36 36 THR THR A . n A 1 44 PRO 44 37 37 PRO PRO A . n A 1 45 VAL 45 38 38 VAL VAL A . n A 1 46 ASP 46 39 39 ASP ASP A . n A 1 47 ASP 47 40 40 ASP ASP A . n A 1 48 LEU 48 41 41 LEU LEU A . n A 1 49 ASP 49 42 42 ASP ASP A . n A 1 50 ARG 50 43 43 ARG ARG A . n A 1 51 CYS 51 44 44 CYS CYS A . n A 1 52 CYS 52 45 45 CYS CYS A . n A 1 53 GLN 53 46 46 GLN GLN A . n A 1 54 THR 54 47 47 THR THR A . n A 1 55 HIS 55 48 48 HIS HIS A . n A 1 56 ASP 56 49 49 ASP ASP A . n A 1 57 ASN 57 50 50 ASN ASN A . n A 1 58 CYS 58 51 51 CYS CYS A . n A 1 59 TYR 59 52 52 TYR TYR A . n A 1 60 LYS 60 53 53 LYS LYS A . n A 1 61 GLN 61 54 54 GLN GLN A . n A 1 62 ALA 62 55 55 ALA ALA A . n A 1 63 LYS 63 56 56 LYS LYS A . n A 1 64 LYS 64 57 57 LYS LYS A . n A 1 65 LEU 65 58 58 LEU LEU A . n A 1 66 ASP 66 59 59 ASP ASP A . n A 1 67 SER 67 60 60 SER SER A . n A 1 68 CYS 68 61 61 CYS CYS A . n A 1 69 LYS 69 62 62 LYS LYS A . n A 1 70 VAL 70 63 63 VAL VAL A . n A 1 71 LEU 71 64 64 LEU LEU A . n A 1 72 VAL 72 65 ? ? ? A . n A 1 73 ASP 73 66 ? ? ? A . n A 1 74 ASN 74 67 ? ? ? A . n A 1 75 PRO 75 68 ? ? ? A . n A 1 76 TYR 76 69 ? ? ? A . n A 1 77 THR 77 70 ? ? ? A . n A 1 78 ASN 78 71 71 ASN ASN A . n A 1 79 ASN 79 72 72 ASN ASN A . n A 1 80 TYR 80 73 73 TYR TYR A . n A 1 81 SER 81 74 74 SER SER A . n A 1 82 TYR 82 75 75 TYR TYR A . n A 1 83 SER 83 76 76 SER SER A . n A 1 84 CYS 84 77 77 CYS CYS A . n A 1 85 SER 85 78 78 SER SER A . n A 1 86 ASN 86 79 79 ASN ASN A . n A 1 87 ASN 87 80 80 ASN ASN A . n A 1 88 GLU 88 81 81 GLU GLU A . n A 1 89 ILE 89 82 82 ILE ILE A . n A 1 90 THR 90 83 83 THR THR A . n A 1 91 CYS 91 84 84 CYS CYS A . n A 1 92 SER 92 85 85 SER SER A . n A 1 93 SER 93 86 86 SER SER A . n A 1 94 GLU 94 87 87 GLU GLU A . n A 1 95 ASN 95 88 88 ASN ASN A . n A 1 96 ASN 96 89 89 ASN ASN A . n A 1 97 ALA 97 90 90 ALA ALA A . n A 1 98 CYS 98 91 91 CYS CYS A . n A 1 99 GLU 99 92 92 GLU GLU A . n A 1 100 ALA 100 93 93 ALA ALA A . n A 1 101 PHE 101 94 94 PHE PHE A . n A 1 102 ILE 102 95 95 ILE ILE A . n A 1 103 CYS 103 96 96 CYS CYS A . n A 1 104 ASN 104 97 97 ASN ASN A . n A 1 105 CYS 105 98 98 CYS CYS A . n A 1 106 ASP 106 99 99 ASP ASP A . n A 1 107 ARG 107 100 100 ARG ARG A . n A 1 108 ASN 108 101 101 ASN ASN A . n A 1 109 ALA 109 102 102 ALA ALA A . n A 1 110 ALA 110 103 103 ALA ALA A . n A 1 111 ILE 111 104 104 ILE ILE A . n A 1 112 CYS 112 105 105 CYS CYS A . n A 1 113 PHE 113 106 106 PHE PHE A . n A 1 114 SER 114 107 107 SER SER A . n A 1 115 LYS 115 108 108 LYS LYS A . n A 1 116 VAL 116 109 109 VAL VAL A . n A 1 117 PRO 117 110 110 PRO PRO A . n A 1 118 TYR 118 111 111 TYR TYR A . n A 1 119 ASN 119 112 112 ASN ASN A . n A 1 120 LYS 120 113 113 LYS LYS A . n A 1 121 GLU 121 114 114 GLU GLU A . n A 1 122 HIS 122 115 115 HIS HIS A . n A 1 123 LYS 123 116 116 LYS LYS A . n A 1 124 ASN 124 117 117 ASN ASN A . n A 1 125 LEU 125 118 118 LEU LEU A . n A 1 126 ASP 126 119 119 ASP ASP A . n A 1 127 LYS 127 120 120 LYS LYS A . n A 1 128 LYS 128 121 121 LYS LYS A . n A 1 129 ASN 129 122 122 ASN ASN A . n A 1 130 CYS 130 123 123 CYS CYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 201 201 CA CA A . C 3 MPD 1 301 301 MPD MPD A . D 3 MPD 1 302 302 MPD MPD A . E 4 HOH 1 303 1 HOH HOH A . E 4 HOH 2 304 2 HOH HOH A . E 4 HOH 3 305 3 HOH HOH A . E 4 HOH 4 306 4 HOH HOH A . E 4 HOH 5 307 5 HOH HOH A . E 4 HOH 6 308 6 HOH HOH A . E 4 HOH 7 309 7 HOH HOH A . E 4 HOH 8 310 8 HOH HOH A . E 4 HOH 9 311 9 HOH HOH A . E 4 HOH 10 312 10 HOH HOH A . E 4 HOH 11 313 11 HOH HOH A . E 4 HOH 12 314 12 HOH HOH A . E 4 HOH 13 315 13 HOH HOH A . E 4 HOH 14 316 14 HOH HOH A . E 4 HOH 15 317 15 HOH HOH A . E 4 HOH 16 318 16 HOH HOH A . E 4 HOH 17 319 17 HOH HOH A . E 4 HOH 18 320 18 HOH HOH A . E 4 HOH 19 321 19 HOH HOH A . E 4 HOH 20 322 20 HOH HOH A . E 4 HOH 21 323 21 HOH HOH A . E 4 HOH 22 324 22 HOH HOH A . E 4 HOH 23 325 23 HOH HOH A . E 4 HOH 24 326 24 HOH HOH A . E 4 HOH 25 327 25 HOH HOH A . E 4 HOH 26 328 26 HOH HOH A . E 4 HOH 27 329 27 HOH HOH A . E 4 HOH 28 330 28 HOH HOH A . E 4 HOH 29 331 29 HOH HOH A . E 4 HOH 30 332 30 HOH HOH A . E 4 HOH 31 333 31 HOH HOH A . E 4 HOH 32 334 32 HOH HOH A . E 4 HOH 33 335 33 HOH HOH A . E 4 HOH 34 336 34 HOH HOH A . E 4 HOH 35 337 35 HOH HOH A . E 4 HOH 36 338 36 HOH HOH A . E 4 HOH 37 339 37 HOH HOH A . E 4 HOH 38 340 38 HOH HOH A . E 4 HOH 39 341 39 HOH HOH A . E 4 HOH 40 342 40 HOH HOH A . E 4 HOH 41 343 41 HOH HOH A . E 4 HOH 42 344 42 HOH HOH A . E 4 HOH 43 345 43 HOH HOH A . E 4 HOH 44 346 44 HOH HOH A . E 4 HOH 45 347 45 HOH HOH A . E 4 HOH 46 348 46 HOH HOH A . E 4 HOH 47 349 47 HOH HOH A . E 4 HOH 48 350 48 HOH HOH A . E 4 HOH 49 351 49 HOH HOH A . E 4 HOH 50 352 50 HOH HOH A . E 4 HOH 51 353 51 HOH HOH A . E 4 HOH 52 354 52 HOH HOH A . E 4 HOH 53 355 53 HOH HOH A . E 4 HOH 54 356 54 HOH HOH A . E 4 HOH 55 357 55 HOH HOH A . E 4 HOH 56 358 56 HOH HOH A . E 4 HOH 57 359 57 HOH HOH A . E 4 HOH 58 360 58 HOH HOH A . E 4 HOH 59 361 59 HOH HOH A . E 4 HOH 60 362 60 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A TYR 35 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 39 ? A GLY 32 ? 1_555 92.4 ? 2 O ? A TYR 35 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 37 ? A GLY 30 ? 1_555 86.1 ? 3 O ? A GLY 39 ? A GLY 32 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 37 ? A GLY 30 ? 1_555 82.6 ? 4 O ? A TYR 35 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 315 ? 1_555 80.3 ? 5 O ? A GLY 39 ? A GLY 32 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 315 ? 1_555 151.3 ? 6 O ? A GLY 37 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 315 ? 1_555 69.3 ? 7 O ? A TYR 35 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD1 ? A ASP 56 ? A ASP 49 ? 1_555 105.1 ? 8 O ? A GLY 39 ? A GLY 32 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD1 ? A ASP 56 ? A ASP 49 ? 1_555 130.3 ? 9 O ? A GLY 37 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD1 ? A ASP 56 ? A ASP 49 ? 1_555 143.4 ? 10 O ? E HOH . ? A HOH 315 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD1 ? A ASP 56 ? A ASP 49 ? 1_555 78.2 ? 11 O ? A TYR 35 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 56 ? A ASP 49 ? 1_555 91.9 ? 12 O ? A GLY 39 ? A GLY 32 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 56 ? A ASP 49 ? 1_555 82.4 ? 13 O ? A GLY 37 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 56 ? A ASP 49 ? 1_555 164.7 ? 14 O ? E HOH . ? A HOH 315 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 56 ? A ASP 49 ? 1_555 125.2 ? 15 OD1 ? A ASP 56 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 56 ? A ASP 49 ? 1_555 51.6 ? 16 O ? A TYR 35 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 316 ? 1_555 174.5 ? 17 O ? A GLY 39 ? A GLY 32 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 316 ? 1_555 84.4 ? 18 O ? A GLY 37 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 316 ? 1_555 89.1 ? 19 O ? E HOH . ? A HOH 315 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 316 ? 1_555 100.4 ? 20 OD1 ? A ASP 56 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 316 ? 1_555 80.3 ? 21 OD2 ? A ASP 56 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 316 ? 1_555 92.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1991-10-15 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_database_status.process_site' # _software.name PROLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 4BP2 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;TWO MOLECULES OF THE PRECIPITATING AGENT, 2-METHYL-2,4-PENTANEDIOL, ARE INCLUDED IN THE MODEL. ; _pdbx_entry_details.sequence_details ;ZYMOGEN HAS FOUR EXTRA RESIDUES AT THE AMINO TERMINUS COMPARED WITH MATURE PHOSPHOLIPASE. THESE RESIDUES ARE NOT SEEN IN THE ELECTRON DENSITY MAP. RESIDUE NUMBERING IS THUS THE SAME AS IN THE MATURE ENZYME. ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 61 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 LEU _pdbx_validate_close_contact.auth_seq_id_2 64 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.12 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 87 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 87 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.327 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.075 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 28 ? ? CG A TYR 28 ? ? CD2 A TYR 28 ? ? 117.39 121.00 -3.61 0.60 N 2 1 CB A ASP 40 ? ? CG A ASP 40 ? ? OD2 A ASP 40 ? ? 111.74 118.30 -6.56 0.90 N 3 1 NE A ARG 43 ? ? CZ A ARG 43 ? ? NH1 A ARG 43 ? ? 126.35 120.30 6.05 0.50 N 4 1 OE1 A GLU 87 ? ? CD A GLU 87 ? ? OE2 A GLU 87 ? ? 116.09 123.30 -7.21 1.20 N 5 1 CG A GLU 87 ? ? CD A GLU 87 ? ? OE1 A GLU 87 ? ? 136.57 118.30 18.27 2.00 N 6 1 CB A ASP 99 ? ? CG A ASP 99 ? ? OD2 A ASP 99 ? ? 123.72 118.30 5.42 0.90 N 7 1 NE A ARG 100 ? ? CZ A ARG 100 ? ? NH1 A ARG 100 ? ? 123.50 120.30 3.20 0.50 N # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C4 ? A MPD 301 ? 'WRONG HAND' . 2 1 C4 ? A MPD 302 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A TRP 3 ? CG ? A TRP 10 CG 2 1 Y 1 A TRP 3 ? CD1 ? A TRP 10 CD1 3 1 Y 1 A TRP 3 ? CD2 ? A TRP 10 CD2 4 1 Y 1 A TRP 3 ? NE1 ? A TRP 10 NE1 5 1 Y 1 A TRP 3 ? CE2 ? A TRP 10 CE2 6 1 Y 1 A TRP 3 ? CE3 ? A TRP 10 CE3 7 1 Y 1 A TRP 3 ? CZ2 ? A TRP 10 CZ2 8 1 Y 1 A TRP 3 ? CZ3 ? A TRP 10 CZ3 9 1 Y 1 A TRP 3 ? CH2 ? A TRP 10 CH2 10 1 Y 1 A LEU 64 ? CB ? A LEU 71 CB 11 1 Y 1 A LEU 64 ? CG ? A LEU 71 CG 12 1 Y 1 A LEU 64 ? CD1 ? A LEU 71 CD1 13 1 Y 1 A LEU 64 ? CD2 ? A LEU 71 CD2 14 1 N 1 A MPD 302 ? CM ? D MPD 1 CM # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN -6 ? A GLN 1 2 1 Y 1 A ALA -5 ? A ALA 2 3 1 Y 1 A GLY -4 ? A GLY 3 4 1 Y 1 A LEU -3 ? A LEU 4 5 1 Y 1 A ASN -2 ? A ASN 5 6 1 Y 1 A SER -1 ? A SER 6 7 1 Y 1 A ARG 0 ? A ARG 7 8 1 Y 1 A VAL 65 ? A VAL 72 9 1 Y 1 A ASP 66 ? A ASP 73 10 1 Y 1 A ASN 67 ? A ASN 74 11 1 Y 1 A PRO 68 ? A PRO 75 12 1 Y 1 A TYR 69 ? A TYR 76 13 1 Y 1 A THR 70 ? A THR 77 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 water HOH #