HEADER HYDROLASE 29-MAY-13 4BQ5 TITLE STRUCTURAL ANALYSIS OF AN EXO-BETA-AGARASE CAVEAT 4BQ5 ATOMS C1, C2, C3 OF AAL A1795 HAVE INCORRECT CHIRALITY. LONG CAVEAT 2 4BQ5 GLYCOSIDIC BONDS BETWEEN RESIDUES A1794-A1795, A1798-A1799, CAVEAT 3 4BQ5 B1799-B1800. COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-AGARASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC MODULE, RESIDUES 47-793; COMPND 5 SYNONYM: FAMILY 50 GLYCOSIDE HYDROLASE; COMPND 6 EC: 3.2.1.81; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROPHAGUS DEGRADANS; SOURCE 3 ORGANISM_TAXID: 203122; SOURCE 4 STRAIN: 2-40; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.PLUVINAGE,J.H.HEHEMANN,A.B.BORASTON REVDAT 7 20-DEC-23 4BQ5 1 REMARK HETSYN REVDAT 6 29-JUL-20 4BQ5 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 01-JUL-20 4BQ5 1 REMARK LINK REVDAT 4 16-OCT-13 4BQ5 1 JRNL REVDAT 3 28-AUG-13 4BQ5 1 REMARK HETATM CONECT REVDAT 2 21-AUG-13 4BQ5 1 JRNL REVDAT 1 14-AUG-13 4BQ5 0 JRNL AUTH B.PLUVINAGE,J.H.HEHEMANN,A.B.BORASTON JRNL TITL SUBSTRATE RECOGNITION AND HYDROLYSIS BY A FAMILY 50 JRNL TITL 2 EXO-BETA-AGARASE AGA50D FROM THE MARINE BACTERIUM JRNL TITL 3 SACCHAROPHAGUS DEGRADANS JRNL REF J.BIOL.CHEM. V. 288 28078 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23921382 JRNL DOI 10.1074/JBC.M113.491068 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 67148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3582 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4962 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 283 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11795 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 200 REMARK 3 SOLVENT ATOMS : 962 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.417 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.264 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.180 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.409 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.854 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12371 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 16850 ; 1.544 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1504 ; 6.653 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 583 ;35.748 ;24.031 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1854 ;14.968 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 59 ;17.850 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1794 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9579 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6010 ; 1.049 ; 1.804 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7516 ; 1.760 ; 2.700 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6361 ; 1.208 ; 1.834 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT. U REMARK 3 VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4BQ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1290057065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99990 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81677 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 39.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4BQ2 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% (W/V) PEG 3350, 0.22 M LITHIUM REMARK 280 SULFATE, 0.1 M TRIS-HCL, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.51500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 103.98500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.08500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 103.98500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.51500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.08500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 44 REMARK 465 LYS A 793 REMARK 465 ASP B 168 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 LYS A 282 CG CD CE NZ REMARK 470 SER A 286 OG REMARK 470 GLN A 352 CG CD OE1 NE2 REMARK 470 LYS A 372 CG CD CE NZ REMARK 470 ASP A 541 CG OD1 OD2 REMARK 470 LYS A 544 CG CD CE NZ REMARK 470 LYS A 588 CG CD CE NZ REMARK 470 LYS A 678 CG CD CE NZ REMARK 470 GLN A 679 CG CD OE1 NE2 REMARK 470 GLN B 103 CG CD OE1 NE2 REMARK 470 LYS B 151 CG CD CE NZ REMARK 470 VAL B 166 CG1 CG2 REMARK 470 ASP B 171 CG OD1 OD2 REMARK 470 VAL B 172 CG1 CG2 REMARK 470 GLU B 240 CG CD OE1 OE2 REMARK 470 GLU B 278 CG CD OE1 OE2 REMARK 470 LYS B 282 CG CD CE NZ REMARK 470 LEU B 379 CG CD1 CD2 REMARK 470 LYS B 544 CG CD CE NZ REMARK 470 LYS B 576 CG CD CE NZ REMARK 470 LYS B 678 CG CD CE NZ REMARK 470 GLU B 686 CG CD OE1 OE2 REMARK 470 LYS B 793 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 165 CD OE1 OE2 REMARK 480 LYS B 84 NZ REMARK 480 LYS B 259 CD CE NZ REMARK 480 GLU B 266 CD OE1 OE2 REMARK 480 LYS B 414 CE NZ REMARK 480 LYS B 588 CD CE NZ REMARK 480 LYS B 658 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C1 GAL F 1 O4 AAL G 2 1.69 REMARK 500 C1 AAL A 1795 O3 GAL A 1796 1.72 REMARK 500 O4 AAL D 2 C1 GAL A 1796 1.75 REMARK 500 C1 GAL C 1 O4 AAL A 1795 1.90 REMARK 500 C1 GAL D 1 O4 AAL E 2 1.92 REMARK 500 O HOH B 2045 O HOH B 2109 2.13 REMARK 500 O LYS A 151 O HOH A 2095 2.13 REMARK 500 O4 AAL F 2 O5 GAL F 3 2.16 REMARK 500 O3 GAL D 1 O5 AAL D 2 2.19 REMARK 500 O HOH A 2479 O HOH A 2483 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 165 CG GLU A 165 CD -0.304 REMARK 500 LYS B 84 CE LYS B 84 NZ -0.380 REMARK 500 LYS B 259 CG LYS B 259 CD -0.510 REMARK 500 LYS B 414 CD LYS B 414 CE -0.312 REMARK 500 LYS B 588 CG LYS B 588 CD 0.256 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 259 CB - CG - CD ANGL. DEV. = 29.1 DEGREES REMARK 500 LEU B 581 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 LYS B 588 CB - CG - CD ANGL. DEV. = -19.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 162 -124.70 55.30 REMARK 500 ASP A 168 -155.04 -152.13 REMARK 500 MET A 198 -71.51 -115.92 REMARK 500 ASN A 253 108.69 -58.61 REMARK 500 ALA A 491 45.09 -148.41 REMARK 500 ASN A 522 23.02 49.64 REMARK 500 ASP A 532 -175.02 68.60 REMARK 500 ASN A 533 117.74 -163.04 REMARK 500 LYS A 576 -41.75 55.46 REMARK 500 ARG A 646 80.17 60.41 REMARK 500 ASP A 755 13.32 -144.72 REMARK 500 HIS B 162 -127.97 49.11 REMARK 500 ASP B 163 1.46 -69.13 REMARK 500 SER B 218 44.68 36.32 REMARK 500 ASN B 253 109.36 -59.57 REMARK 500 ILE B 331 60.47 67.26 REMARK 500 ALA B 408 134.16 -170.85 REMARK 500 ASN B 522 26.92 46.31 REMARK 500 ASP B 532 -171.93 63.35 REMARK 500 ASN B 533 114.32 -166.25 REMARK 500 LYS B 576 -73.12 75.25 REMARK 500 LYS B 588 44.16 -146.54 REMARK 500 ARG B 646 79.46 60.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 285 SER A 286 -30.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GAL C 1 REMARK 610 GAL D 1 REMARK 610 GAL F 1 REMARK 610 GAL G 1 REMARK 610 AAL A 1795 REMARK 610 GAL A 1796 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1802 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 50 O REMARK 620 2 GLU A 52 OE2 92.8 REMARK 620 3 SER A 80 OG 159.9 68.0 REMARK 620 4 LYS A 81 O 95.5 90.5 90.8 REMARK 620 5 ASP A 228 OD1 75.4 166.7 124.3 84.8 REMARK 620 6 ASP A 228 OD2 127.9 138.4 72.1 78.6 52.6 REMARK 620 7 HOH A2032 O 103.7 97.3 74.2 158.8 91.4 82.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1804 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 397 O REMARK 620 2 ASN A 400 OD1 68.9 REMARK 620 3 GLU A 427 OE1 85.5 74.7 REMARK 620 4 GLU A 427 OE2 95.7 121.8 47.7 REMARK 620 5 HOH A2281 O 71.2 76.7 148.2 152.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1805 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 50 O REMARK 620 2 GLU B 52 OE2 83.9 REMARK 620 3 SER B 80 OG 160.0 76.5 REMARK 620 4 LYS B 81 O 90.4 93.8 95.3 REMARK 620 5 ASP B 228 OD1 75.7 159.2 124.1 82.5 REMARK 620 6 ASP B 228 OD2 128.7 146.3 71.3 79.9 53.3 REMARK 620 7 HOH B2003 O 94.6 91.6 81.6 173.1 93.9 93.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1806 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO B 397 O REMARK 620 2 GLU B 427 OE1 95.6 REMARK 620 3 GLU B 427 OE2 93.1 49.6 REMARK 620 4 GLU B 432 OE2 178.3 83.1 87.0 REMARK 620 5 HOH B2242 O 73.8 163.8 141.1 107.2 REMARK 620 6 HOH B2243 O 92.2 123.3 74.0 89.5 70.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1807 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2209 O REMARK 620 2 HOH B2210 O 69.8 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BQ2 RELATED DB: PDB REMARK 900 STRUCTURAL ANALYSIS OF AN EXO-BETA-AGARASE REMARK 900 RELATED ID: 4BQ3 RELATED DB: PDB REMARK 900 STRUCTURAL ANALYSIS OF AN EXO-BETA-AGARASE REMARK 900 RELATED ID: 4BQ4 RELATED DB: PDB REMARK 900 STRUCTURAL ANALYSIS OF AN EXO-BETA-AGARASE DBREF 4BQ5 A 47 793 UNP Q21HC5 Q21HC5_SACD2 47 793 DBREF 4BQ5 B 47 793 UNP Q21HC5 Q21HC5_SACD2 47 793 SEQADV 4BQ5 GLY A 44 UNP Q21HC5 EXPRESSION TAG SEQADV 4BQ5 SER A 45 UNP Q21HC5 EXPRESSION TAG SEQADV 4BQ5 HIS A 46 UNP Q21HC5 EXPRESSION TAG SEQADV 4BQ5 GLN A 534 UNP Q21HC5 GLU 534 ENGINEERED MUTATION SEQADV 4BQ5 GLY B 44 UNP Q21HC5 EXPRESSION TAG SEQADV 4BQ5 SER B 45 UNP Q21HC5 EXPRESSION TAG SEQADV 4BQ5 HIS B 46 UNP Q21HC5 EXPRESSION TAG SEQADV 4BQ5 GLN B 534 UNP Q21HC5 GLU 534 ENGINEERED MUTATION SEQRES 1 A 750 GLY SER HIS MET LEU PHE ASP PHE GLU ASN ASP GLN VAL SEQRES 2 A 750 PRO SER ASN ILE HIS PHE LEU ASN ALA ARG ALA SER ILE SEQRES 3 A 750 GLU THR TYR THR GLY ILE ASN GLY GLU PRO SER LYS GLY SEQRES 4 A 750 LEU LYS LEU ALA MET GLN SER LYS GLN HIS SER TYR THR SEQRES 5 A 750 GLY LEU ALA ILE VAL PRO GLU GLN PRO TRP ASP TRP SER SEQRES 6 A 750 GLU PHE THR SER ALA SER LEU TYR PHE ASP ILE VAL SER SEQRES 7 A 750 VAL GLY ASP HIS SER THR GLN PHE TYR LEU ASP VAL THR SEQRES 8 A 750 ASP GLN ASN GLY ALA VAL PHE THR ARG SER ILE ASP ILE SEQRES 9 A 750 PRO VAL GLY LYS MET GLN SER TYR TYR ALA LYS LEU SER SEQRES 10 A 750 GLY HIS ASP LEU GLU VAL PRO ASP SER GLY ASP VAL ASN SEQRES 11 A 750 ASP LEU ASN LEU ALA SER GLY LEU ARG SER ASN PRO PRO SEQRES 12 A 750 THR TRP THR SER ASP ASP ARG GLN PHE VAL TRP MET TRP SEQRES 13 A 750 GLY VAL LYS ASN LEU ASP LEU SER GLY ILE ALA LYS ILE SEQRES 14 A 750 SER LEU SER VAL GLN SER ALA MET HIS ASP LYS THR VAL SEQRES 15 A 750 ILE ILE ASP ASN ILE ARG ILE GLN PRO ASN PRO PRO GLN SEQRES 16 A 750 ASP GLU ASN PHE LEU VAL GLY LEU VAL ASP GLU PHE GLY SEQRES 17 A 750 GLN ASN ALA LYS VAL ASP TYR LYS GLY LYS ILE HIS SER SEQRES 18 A 750 LEU GLU GLU LEU HIS ALA ALA ARG ASP VAL GLU LEU ALA SEQRES 19 A 750 GLU LEU ASP GLY LYS PRO MET PRO SER ARG SER LYS PHE SEQRES 20 A 750 GLY GLY TRP LEU ALA GLY PRO LYS LEU LYS ALA THR GLY SEQRES 21 A 750 TYR PHE ARG THR GLU LYS ILE ASN GLY LYS TRP MET LEU SEQRES 22 A 750 VAL ASP PRO GLU GLY TYR PRO TYR PHE ALA THR GLY LEU SEQRES 23 A 750 ASP ILE ILE ARG LEU SER ASN SER SER THR MET THR GLY SEQRES 24 A 750 TYR ASP TYR ASP GLN ALA THR VAL ALA GLN ARG SER ALA SEQRES 25 A 750 ASP ASP VAL THR PRO GLU ASP SER LYS GLY LEU MET ALA SEQRES 26 A 750 VAL SER GLU LYS SER PHE ALA THR ARG HIS LEU ALA SER SEQRES 27 A 750 PRO THR ARG ALA ALA MET PHE ASN TRP LEU PRO ASP TYR SEQRES 28 A 750 ASP HIS PRO LEU ALA ASN HIS TYR ASN TYR ARG ARG SER SEQRES 29 A 750 ALA HIS SER GLY PRO LEU LYS ARG GLY GLU ALA TYR SER SEQRES 30 A 750 PHE TYR SER ALA ASN LEU GLU ARG LYS TYR GLY GLU THR SEQRES 31 A 750 TYR PRO GLY SER TYR LEU ASP LYS TRP ARG GLU VAL THR SEQRES 32 A 750 VAL ASP ARG MET LEU ASN TRP GLY PHE THR SER LEU GLY SEQRES 33 A 750 ASN TRP THR ASP PRO ALA TYR TYR ASP ASN ASN ARG ILE SEQRES 34 A 750 PRO PHE PHE ALA ASN GLY TRP VAL ILE GLY ASP PHE LYS SEQRES 35 A 750 THR VAL SER SER GLY ALA ASP PHE TRP GLY ALA MET PRO SEQRES 36 A 750 ASP VAL PHE ASP PRO GLU PHE LYS VAL ARG ALA MET GLU SEQRES 37 A 750 THR ALA ARG VAL VAL SER GLU GLU ILE LYS ASN SER PRO SEQRES 38 A 750 TRP CYS VAL GLY VAL PHE ILE ASP ASN GLN LYS SER PHE SEQRES 39 A 750 GLY ARG PRO ASP SER ASP LYS ALA GLN TYR GLY ILE PRO SEQRES 40 A 750 ILE HIS THR LEU GLY ARG PRO SER GLU GLY VAL PRO THR SEQRES 41 A 750 ARG GLN ALA PHE SER LYS LEU LEU LYS ALA LYS TYR LYS SEQRES 42 A 750 THR ILE ALA ALA LEU ASN ASN ALA TRP GLY LEU LYS LEU SEQRES 43 A 750 SER SER TRP ALA GLU PHE ASP LEU GLY VAL ASP VAL LYS SEQRES 44 A 750 ALA LEU PRO VAL THR ASP THR LEU ARG ALA ASP TYR SER SEQRES 45 A 750 MET LEU LEU SER ALA TYR ALA ASP GLN TYR PHE LYS VAL SEQRES 46 A 750 VAL HIS GLY ALA VAL GLU HIS TYR MET PRO ASN HIS LEU SEQRES 47 A 750 TYR LEU GLY ALA ARG PHE PRO ASP TRP GLY MET PRO MET SEQRES 48 A 750 GLU VAL VAL LYS ALA ALA ALA LYS TYR ALA ASP VAL VAL SEQRES 49 A 750 SER TYR ASN SER TYR LYS GLU GLY LEU PRO LYS GLN LYS SEQRES 50 A 750 TRP ALA PHE LEU ALA GLU LEU ASP LYS PRO SER ILE ILE SEQRES 51 A 750 GLY GLU PHE HIS ILE GLY ALA MET ASP HIS GLY SER TYR SEQRES 52 A 750 HIS PRO GLY LEU ILE HIS ALA ALA SER GLN ALA ASP ARG SEQRES 53 A 750 GLY GLU MET TYR LYS ASP TYR MET GLN SER VAL ILE ASP SEQRES 54 A 750 ASN PRO TYR PHE VAL GLY ALA HIS TRP PHE GLN TYR MET SEQRES 55 A 750 ASP SER PRO LEU THR GLY ARG ALA TYR ASP GLY GLU ASN SEQRES 56 A 750 TYR ASN VAL GLY PHE VAL ASP VAL THR ASP THR PRO TYR SEQRES 57 A 750 GLN GLU MET VAL ASP ALA ALA LYS GLU VAL ASN ALA LYS SEQRES 58 A 750 ILE TYR THR GLU ARG LEU GLY SER LYS SEQRES 1 B 750 GLY SER HIS MET LEU PHE ASP PHE GLU ASN ASP GLN VAL SEQRES 2 B 750 PRO SER ASN ILE HIS PHE LEU ASN ALA ARG ALA SER ILE SEQRES 3 B 750 GLU THR TYR THR GLY ILE ASN GLY GLU PRO SER LYS GLY SEQRES 4 B 750 LEU LYS LEU ALA MET GLN SER LYS GLN HIS SER TYR THR SEQRES 5 B 750 GLY LEU ALA ILE VAL PRO GLU GLN PRO TRP ASP TRP SER SEQRES 6 B 750 GLU PHE THR SER ALA SER LEU TYR PHE ASP ILE VAL SER SEQRES 7 B 750 VAL GLY ASP HIS SER THR GLN PHE TYR LEU ASP VAL THR SEQRES 8 B 750 ASP GLN ASN GLY ALA VAL PHE THR ARG SER ILE ASP ILE SEQRES 9 B 750 PRO VAL GLY LYS MET GLN SER TYR TYR ALA LYS LEU SER SEQRES 10 B 750 GLY HIS ASP LEU GLU VAL PRO ASP SER GLY ASP VAL ASN SEQRES 11 B 750 ASP LEU ASN LEU ALA SER GLY LEU ARG SER ASN PRO PRO SEQRES 12 B 750 THR TRP THR SER ASP ASP ARG GLN PHE VAL TRP MET TRP SEQRES 13 B 750 GLY VAL LYS ASN LEU ASP LEU SER GLY ILE ALA LYS ILE SEQRES 14 B 750 SER LEU SER VAL GLN SER ALA MET HIS ASP LYS THR VAL SEQRES 15 B 750 ILE ILE ASP ASN ILE ARG ILE GLN PRO ASN PRO PRO GLN SEQRES 16 B 750 ASP GLU ASN PHE LEU VAL GLY LEU VAL ASP GLU PHE GLY SEQRES 17 B 750 GLN ASN ALA LYS VAL ASP TYR LYS GLY LYS ILE HIS SER SEQRES 18 B 750 LEU GLU GLU LEU HIS ALA ALA ARG ASP VAL GLU LEU ALA SEQRES 19 B 750 GLU LEU ASP GLY LYS PRO MET PRO SER ARG SER LYS PHE SEQRES 20 B 750 GLY GLY TRP LEU ALA GLY PRO LYS LEU LYS ALA THR GLY SEQRES 21 B 750 TYR PHE ARG THR GLU LYS ILE ASN GLY LYS TRP MET LEU SEQRES 22 B 750 VAL ASP PRO GLU GLY TYR PRO TYR PHE ALA THR GLY LEU SEQRES 23 B 750 ASP ILE ILE ARG LEU SER ASN SER SER THR MET THR GLY SEQRES 24 B 750 TYR ASP TYR ASP GLN ALA THR VAL ALA GLN ARG SER ALA SEQRES 25 B 750 ASP ASP VAL THR PRO GLU ASP SER LYS GLY LEU MET ALA SEQRES 26 B 750 VAL SER GLU LYS SER PHE ALA THR ARG HIS LEU ALA SER SEQRES 27 B 750 PRO THR ARG ALA ALA MET PHE ASN TRP LEU PRO ASP TYR SEQRES 28 B 750 ASP HIS PRO LEU ALA ASN HIS TYR ASN TYR ARG ARG SER SEQRES 29 B 750 ALA HIS SER GLY PRO LEU LYS ARG GLY GLU ALA TYR SER SEQRES 30 B 750 PHE TYR SER ALA ASN LEU GLU ARG LYS TYR GLY GLU THR SEQRES 31 B 750 TYR PRO GLY SER TYR LEU ASP LYS TRP ARG GLU VAL THR SEQRES 32 B 750 VAL ASP ARG MET LEU ASN TRP GLY PHE THR SER LEU GLY SEQRES 33 B 750 ASN TRP THR ASP PRO ALA TYR TYR ASP ASN ASN ARG ILE SEQRES 34 B 750 PRO PHE PHE ALA ASN GLY TRP VAL ILE GLY ASP PHE LYS SEQRES 35 B 750 THR VAL SER SER GLY ALA ASP PHE TRP GLY ALA MET PRO SEQRES 36 B 750 ASP VAL PHE ASP PRO GLU PHE LYS VAL ARG ALA MET GLU SEQRES 37 B 750 THR ALA ARG VAL VAL SER GLU GLU ILE LYS ASN SER PRO SEQRES 38 B 750 TRP CYS VAL GLY VAL PHE ILE ASP ASN GLN LYS SER PHE SEQRES 39 B 750 GLY ARG PRO ASP SER ASP LYS ALA GLN TYR GLY ILE PRO SEQRES 40 B 750 ILE HIS THR LEU GLY ARG PRO SER GLU GLY VAL PRO THR SEQRES 41 B 750 ARG GLN ALA PHE SER LYS LEU LEU LYS ALA LYS TYR LYS SEQRES 42 B 750 THR ILE ALA ALA LEU ASN ASN ALA TRP GLY LEU LYS LEU SEQRES 43 B 750 SER SER TRP ALA GLU PHE ASP LEU GLY VAL ASP VAL LYS SEQRES 44 B 750 ALA LEU PRO VAL THR ASP THR LEU ARG ALA ASP TYR SER SEQRES 45 B 750 MET LEU LEU SER ALA TYR ALA ASP GLN TYR PHE LYS VAL SEQRES 46 B 750 VAL HIS GLY ALA VAL GLU HIS TYR MET PRO ASN HIS LEU SEQRES 47 B 750 TYR LEU GLY ALA ARG PHE PRO ASP TRP GLY MET PRO MET SEQRES 48 B 750 GLU VAL VAL LYS ALA ALA ALA LYS TYR ALA ASP VAL VAL SEQRES 49 B 750 SER TYR ASN SER TYR LYS GLU GLY LEU PRO LYS GLN LYS SEQRES 50 B 750 TRP ALA PHE LEU ALA GLU LEU ASP LYS PRO SER ILE ILE SEQRES 51 B 750 GLY GLU PHE HIS ILE GLY ALA MET ASP HIS GLY SER TYR SEQRES 52 B 750 HIS PRO GLY LEU ILE HIS ALA ALA SER GLN ALA ASP ARG SEQRES 53 B 750 GLY GLU MET TYR LYS ASP TYR MET GLN SER VAL ILE ASP SEQRES 54 B 750 ASN PRO TYR PHE VAL GLY ALA HIS TRP PHE GLN TYR MET SEQRES 55 B 750 ASP SER PRO LEU THR GLY ARG ALA TYR ASP GLY GLU ASN SEQRES 56 B 750 TYR ASN VAL GLY PHE VAL ASP VAL THR ASP THR PRO TYR SEQRES 57 B 750 GLN GLU MET VAL ASP ALA ALA LYS GLU VAL ASN ALA LYS SEQRES 58 B 750 ILE TYR THR GLU ARG LEU GLY SER LYS HET GAL C 1 11 HET AAL C 2 10 HET GAL D 1 11 HET AAL D 2 10 HET GAL E 1 12 HET AAL E 2 10 HET GAL F 1 11 HET AAL F 2 10 HET GAL F 3 11 HET AAL F 4 10 HET GAL G 1 11 HET AAL G 2 10 HET GAL H 1 12 HET AAL H 2 10 HET AAL A1795 10 HET GAL A1796 11 HET GOL A1801 6 HET CA A1802 1 HET CA A1803 1 HET CA A1804 1 HET GOL B1802 6 HET GOL B1803 6 HET GOL B1804 6 HET CA B1805 1 HET CA B1806 1 HET CA B1807 1 HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM AAL 3,6-ANHYDRO-ALPHA-L-GALACTOPYRANOSE HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN AAL 3,6-ANHYDRO-L-GALACTOSE; 3,6-ANHYDRO-ALPHA-L-GALACTOSE; HETSYN 2 AAL 3,6-ANHYDRO-GALACTOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GAL 8(C6 H12 O6) FORMUL 3 AAL 8(C6 H10 O5) FORMUL 11 GOL 4(C3 H8 O3) FORMUL 12 CA 6(CA 2+) FORMUL 21 HOH *962(H2 O) HELIX 1 1 GLY A 161 GLU A 165 5 5 HELIX 2 2 SER A 264 LEU A 279 1 16 HELIX 3 3 ASP A 346 VAL A 350 5 5 HELIX 4 4 PRO A 360 LYS A 364 5 5 HELIX 5 5 SER A 370 ALA A 375 1 6 HELIX 6 6 SER A 381 MET A 387 1 7 HELIX 7 7 HIS A 396 ASN A 400 5 5 HELIX 8 8 SER A 420 GLY A 431 1 12 HELIX 9 9 GLY A 436 GLY A 454 1 19 HELIX 10 10 ASP A 463 TYR A 467 5 5 HELIX 11 11 ASP A 502 LYS A 521 1 20 HELIX 12 12 SER A 542 TYR A 547 1 6 HELIX 13 13 TYR A 547 GLY A 555 1 9 HELIX 14 14 VAL A 561 LYS A 576 1 16 HELIX 15 15 THR A 577 GLY A 586 1 10 HELIX 16 16 SER A 591 ASP A 596 1 6 HELIX 17 17 THR A 607 MET A 637 1 31 HELIX 18 18 PRO A 653 ALA A 664 1 12 HELIX 19 19 PHE A 683 ASP A 688 1 6 HELIX 20 20 SER A 715 ASP A 732 1 18 HELIX 21 21 TYR A 771 GLY A 791 1 21 HELIX 22 22 GLY B 161 GLU B 165 5 5 HELIX 23 23 SER B 264 ALA B 277 1 14 HELIX 24 24 ASP B 346 VAL B 350 5 5 HELIX 25 25 PRO B 360 LYS B 364 5 5 HELIX 26 26 SER B 370 THR B 376 1 7 HELIX 27 27 SER B 381 ALA B 386 1 6 HELIX 28 28 HIS B 396 ASN B 400 5 5 HELIX 29 29 SER B 420 GLY B 431 1 12 HELIX 30 30 GLY B 436 GLY B 454 1 19 HELIX 31 31 ASP B 463 TYR B 467 5 5 HELIX 32 32 ASP B 502 LYS B 521 1 20 HELIX 33 33 SER B 542 TYR B 547 1 6 HELIX 34 34 TYR B 547 GLY B 555 1 9 HELIX 35 35 VAL B 561 LYS B 576 1 16 HELIX 36 36 THR B 577 GLY B 586 1 10 HELIX 37 37 SER B 591 ASP B 596 1 6 HELIX 38 38 THR B 607 MET B 637 1 31 HELIX 39 39 PRO B 653 ALA B 664 1 12 HELIX 40 40 PHE B 683 ASP B 688 1 6 HELIX 41 41 SER B 715 ASN B 733 1 19 HELIX 42 42 TYR B 771 ALA B 783 1 13 HELIX 43 43 LYS B 784 LEU B 790 1 7 SHEET 1 AA 2 HIS A 46 PHE A 49 0 SHEET 2 AA 2 LYS A 223 PRO A 234 1 O ILE A 230 N LEU A 48 SHEET 1 AB 6 ALA A 65 THR A 73 0 SHEET 2 AB 6 PRO A 79 MET A 87 -1 O SER A 80 N TYR A 72 SHEET 3 AB 6 LYS A 223 PRO A 234 -1 O LYS A 223 N MET A 87 SHEET 4 AB 6 ALA A 113 SER A 121 -1 O SER A 114 N GLN A 233 SHEET 5 AB 6 GLN A 153 LYS A 158 -1 O GLN A 153 N ILE A 119 SHEET 6 AB 6 ARG A 193 GLN A 194 1 O ARG A 193 N TYR A 156 SHEET 1 AC 4 ALA A 65 THR A 73 0 SHEET 2 AC 4 PRO A 79 MET A 87 -1 O SER A 80 N TYR A 72 SHEET 3 AC 4 LYS A 223 PRO A 234 -1 O LYS A 223 N MET A 87 SHEET 4 AC 4 HIS A 46 PHE A 49 1 O HIS A 46 N ILE A 232 SHEET 1 AD 6 ILE A 60 LEU A 63 0 SHEET 2 AD 6 TYR A 94 ILE A 99 -1 O GLY A 96 N LEU A 63 SHEET 3 AD 6 ILE A 209 GLN A 217 -1 O ILE A 212 N ILE A 99 SHEET 4 AD 6 THR A 127 ASP A 135 -1 O TYR A 130 N SER A 215 SHEET 5 AD 6 VAL A 140 ILE A 147 -1 O PHE A 141 N VAL A 133 SHEET 6 AD 6 VAL A 196 GLY A 200 -1 O VAL A 196 N SER A 144 SHEET 1 AE 3 ARG A 306 ILE A 310 0 SHEET 2 AE 3 LYS A 313 VAL A 317 -1 O LYS A 313 N ILE A 310 SHEET 3 AE 3 PRO A 323 TYR A 324 -1 O TYR A 324 N LEU A 316 SHEET 1 AF 4 ALA A 326 LEU A 329 0 SHEET 2 AF 4 PHE A 736 TRP A 741 1 O VAL A 737 N ALA A 326 SHEET 3 AF 4 SER A 691 GLU A 695 1 O SER A 691 N VAL A 737 SHEET 4 AF 4 VAL A 667 ASN A 670 1 O VAL A 667 N ILE A 692 SHEET 1 AG 3 THR A 339 MET A 340 0 SHEET 2 AG 3 GLY A 416 TYR A 419 -1 O TYR A 419 N THR A 339 SHEET 3 AG 3 TYR A 402 ARG A 405 -1 O ASN A 403 N ALA A 418 SHEET 1 AH 2 TYR A 343 ASP A 344 0 SHEET 2 AH 2 HIS A 378 LEU A 379 -1 O HIS A 378 N ASP A 344 SHEET 1 AI 2 PHE A 474 GLY A 478 0 SHEET 2 AI 2 CYS A 526 ILE A 531 1 N VAL A 527 O PHE A 474 SHEET 1 AJ 2 THR A 486 VAL A 487 0 SHEET 2 AJ 2 MET A 497 PRO A 498 -1 O MET A 497 N VAL A 487 SHEET 1 BA 2 HIS B 46 PHE B 49 0 SHEET 2 BA 2 LYS B 223 PRO B 234 1 O ILE B 230 N LEU B 48 SHEET 1 BB 6 ALA B 65 THR B 73 0 SHEET 2 BB 6 PRO B 79 MET B 87 -1 O SER B 80 N TYR B 72 SHEET 3 BB 6 LYS B 223 PRO B 234 -1 O LYS B 223 N MET B 87 SHEET 4 BB 6 ALA B 113 VAL B 122 -1 O SER B 114 N GLN B 233 SHEET 5 BB 6 GLN B 153 LYS B 158 -1 O GLN B 153 N ILE B 119 SHEET 6 BB 6 ARG B 193 GLN B 194 1 O ARG B 193 N TYR B 156 SHEET 1 BC 4 ALA B 65 THR B 73 0 SHEET 2 BC 4 PRO B 79 MET B 87 -1 O SER B 80 N TYR B 72 SHEET 3 BC 4 LYS B 223 PRO B 234 -1 O LYS B 223 N MET B 87 SHEET 4 BC 4 HIS B 46 PHE B 49 1 O HIS B 46 N ILE B 232 SHEET 1 BD 6 ILE B 60 LEU B 63 0 SHEET 2 BD 6 TYR B 94 ILE B 99 -1 O GLY B 96 N LEU B 63 SHEET 3 BD 6 ILE B 209 GLN B 217 -1 O ILE B 212 N ILE B 99 SHEET 4 BD 6 THR B 127 ASP B 135 -1 O TYR B 130 N SER B 215 SHEET 5 BD 6 VAL B 140 ILE B 147 -1 O PHE B 141 N VAL B 133 SHEET 6 BD 6 VAL B 196 GLY B 200 -1 O VAL B 196 N SER B 144 SHEET 1 BE 3 ARG B 306 ILE B 310 0 SHEET 2 BE 3 LYS B 313 VAL B 317 -1 O LYS B 313 N ILE B 310 SHEET 3 BE 3 PRO B 323 TYR B 324 -1 O TYR B 324 N LEU B 316 SHEET 1 BF 4 ALA B 326 ASP B 330 0 SHEET 2 BF 4 PHE B 736 PHE B 742 1 O VAL B 737 N ALA B 326 SHEET 3 BF 4 SER B 691 GLU B 695 1 O SER B 691 N VAL B 737 SHEET 4 BF 4 VAL B 667 ASN B 670 1 O VAL B 667 N ILE B 692 SHEET 1 BG 3 THR B 339 MET B 340 0 SHEET 2 BG 3 GLY B 416 TYR B 419 -1 O TYR B 419 N THR B 339 SHEET 3 BG 3 TYR B 402 ARG B 405 -1 O ASN B 403 N ALA B 418 SHEET 1 BH 2 TYR B 343 ASP B 344 0 SHEET 2 BH 2 HIS B 378 LEU B 379 -1 O HIS B 378 N ASP B 344 SHEET 1 BI 3 PHE B 474 GLY B 478 0 SHEET 2 BI 3 CYS B 526 ILE B 531 1 N VAL B 527 O PHE B 474 SHEET 3 BI 3 LEU B 641 TYR B 642 1 O LEU B 641 N VAL B 529 SHEET 1 BJ 2 THR B 486 VAL B 487 0 SHEET 2 BJ 2 MET B 497 PRO B 498 -1 O MET B 497 N VAL B 487 LINK O3 GAL C 1 C1 AAL C 2 1555 1555 1.43 LINK O3 GAL D 1 C1 AAL D 2 1555 1555 1.39 LINK O3 GAL E 1 C1 AAL E 2 1555 1555 1.43 LINK O3 GAL F 1 C1 AAL F 2 1555 1555 1.43 LINK O4 AAL F 2 C1 GAL F 3 1555 1555 1.49 LINK O3 GAL F 3 C1 AAL F 4 1555 1555 1.38 LINK O3 GAL G 1 C1 AAL G 2 1555 1555 1.43 LINK O3 GAL H 1 C1 AAL H 2 1555 1555 1.43 LINK O ASP A 50 CA CA A1802 1555 1555 2.28 LINK OE2 GLU A 52 CA CA A1802 1555 1555 2.59 LINK OG SER A 80 CA CA A1802 1555 1555 2.55 LINK O LYS A 81 CA CA A1802 1555 1555 2.33 LINK OD1 ASP A 228 CA CA A1802 1555 1555 2.51 LINK OD2 ASP A 228 CA CA A1802 1555 1555 2.38 LINK O PRO A 397 CA CA A1804 1555 1555 2.64 LINK OD1 ASN A 400 CA CA A1804 1555 1555 2.58 LINK OE1 GLU A 427 CA CA A1804 1555 1555 2.94 LINK OE2 GLU A 427 CA CA A1804 1555 1555 2.42 LINK CA CA A1802 O HOH A2032 1555 1555 2.48 LINK CA CA A1803 O HOH A2245 1555 1555 3.10 LINK CA CA A1804 O HOH A2281 1555 1555 2.33 LINK O ASP B 50 CA CA B1805 1555 1555 2.33 LINK OE2 GLU B 52 CA CA B1805 1555 1555 2.43 LINK OG SER B 80 CA CA B1805 1555 1555 2.76 LINK O LYS B 81 CA CA B1805 1555 1555 2.20 LINK OD1 ASP B 228 CA CA B1805 1555 1555 2.59 LINK OD2 ASP B 228 CA CA B1805 1555 1555 2.39 LINK O PRO B 397 CA CA B1806 1555 1555 2.46 LINK OE1 GLU B 427 CA CA B1806 1555 1555 2.55 LINK OE2 GLU B 427 CA CA B1806 1555 1555 2.72 LINK OE2 GLU B 432 CA CA B1806 1555 1555 3.07 LINK CA CA B1805 O HOH B2003 1555 1555 2.31 LINK CA CA B1806 O HOH B2242 1555 1555 2.54 LINK CA CA B1806 O HOH B2243 1555 1555 2.49 LINK CA CA B1807 O HOH B2209 1555 1555 3.06 LINK CA CA B1807 O HOH B2210 1555 1555 3.10 CISPEP 1 PHE A 742 GLN A 743 0 10.92 CISPEP 2 GLY B 44 SER B 45 0 1.08 CISPEP 3 PHE B 742 GLN B 743 0 13.33 CRYST1 69.030 116.170 207.970 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014486 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008608 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004808 0.00000