HEADER HYDROLASE 04-JUN-13 4BRI TITLE LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II (CLOSED) IN TITLE 2 COMPLEX WITH MG UMPPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE I; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NTPDASE1; COMPND 5 EC: 3.6.1.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE, APYRASE, ATPASE, ADPASE, CD39, PURINERGIC SIGNALLING, KEYWDS 2 DOMAIN ROTATION, TRANSITION STATE, NTPDASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ZEBISCH,P.SCHAEFER,P.LAUBLE,N.STRAETER REVDAT 3 25-DEC-13 4BRI 1 KEYWDS REVDAT 2 28-AUG-13 4BRI 1 JRNL REVDAT 1 17-JUL-13 4BRI 0 JRNL AUTH M.ZEBISCH,M.KRAUSS,P.SCHAEFER,P.LAUBLE,N.STRAETER JRNL TITL CRYSTALLOGRAPHIC SNAPSHOTS ALONG THE REACTION PATHWAY OF JRNL TITL 2 NUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASES JRNL REF STRUCTURE V. 21 1460 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23830739 JRNL DOI 10.1016/J.STR.2013.05.016 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU, REMARK 3 STEINER,NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 99.23 REMARK 3 NUMBER OF REFLECTIONS : 72181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.16407 REMARK 3 R VALUE (WORKING SET) : 0.16375 REMARK 3 FREE R VALUE : 0.18452 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.5 REMARK 3 FREE R VALUE TEST SET COUNT : 1073 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.752 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.797 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4820 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.323 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.354 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5859 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 543 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.458 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.76 REMARK 3 B22 (A**2) : -0.01 REMARK 3 B33 (A**2) : 0.68 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : -0.09 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.261 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6135 ; 0.020 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8436 ; 1.903 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 780 ; 5.846 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 307 ;44.171 ;26.156 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 991 ;13.790 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;20.600 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 913 ; 0.143 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4770 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): 68.1272 11.4350 -0.6971 REMARK 3 T TENSOR REMARK 3 T11: 0.1123 T22: 0.0870 REMARK 3 T33: 0.0557 T12: -0.0201 REMARK 3 T13: 0.0436 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 1.0717 L22: 1.0867 REMARK 3 L33: 1.9255 L12: 0.1861 REMARK 3 L13: -0.3956 L23: -0.2105 REMARK 3 S TENSOR REMARK 3 S11: 0.0127 S12: 0.0608 S13: 0.0329 REMARK 3 S21: -0.1974 S22: -0.0207 S23: -0.1387 REMARK 3 S31: 0.0090 S32: 0.1340 S33: 0.0080 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 156 A 179 REMARK 3 RESIDUE RANGE : A 377 A 394 REMARK 3 ORIGIN FOR THE GROUP (A): 50.9174 7.3234 -1.0715 REMARK 3 T TENSOR REMARK 3 T11: 0.1061 T22: 0.1085 REMARK 3 T33: 0.0267 T12: -0.0181 REMARK 3 T13: -0.0061 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 2.8589 L22: 2.0286 REMARK 3 L33: 3.1317 L12: 0.6128 REMARK 3 L13: -0.8629 L23: -0.2704 REMARK 3 S TENSOR REMARK 3 S11: -0.1279 S12: 0.4598 S13: 0.2178 REMARK 3 S21: -0.3063 S22: 0.0443 S23: 0.0861 REMARK 3 S31: 0.0776 S32: -0.2323 S33: 0.0836 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 180 A 376 REMARK 3 ORIGIN FOR THE GROUP (A): 50.5290 -3.4422 15.4288 REMARK 3 T TENSOR REMARK 3 T11: 0.0415 T22: 0.0501 REMARK 3 T33: 0.0404 T12: -0.0166 REMARK 3 T13: 0.0277 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.7123 L22: 1.0301 REMARK 3 L33: 0.9345 L12: -0.2915 REMARK 3 L13: 0.3562 L23: -0.2880 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: 0.0346 S13: 0.0232 REMARK 3 S21: -0.0839 S22: -0.0121 S23: 0.0541 REMARK 3 S31: 0.0369 S32: -0.0638 S33: 0.0190 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 34 B 155 REMARK 3 ORIGIN FOR THE GROUP (A): 88.1827 -4.0895 29.1607 REMARK 3 T TENSOR REMARK 3 T11: 0.0264 T22: 0.0470 REMARK 3 T33: 0.0870 T12: 0.0046 REMARK 3 T13: 0.0083 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.1239 L22: 0.7509 REMARK 3 L33: 0.9588 L12: -0.0780 REMARK 3 L13: -0.0577 L23: 0.1114 REMARK 3 S TENSOR REMARK 3 S11: -0.0491 S12: 0.1209 S13: 0.0728 REMARK 3 S21: 0.0033 S22: 0.0206 S23: -0.1899 REMARK 3 S31: -0.0391 S32: 0.0862 S33: 0.0285 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 156 B 179 REMARK 3 RESIDUE RANGE : B 377 B 394 REMARK 3 ORIGIN FOR THE GROUP (A): 81.3711 -1.3816 45.3246 REMARK 3 T TENSOR REMARK 3 T11: 0.0839 T22: 0.0645 REMARK 3 T33: 0.0558 T12: 0.0331 REMARK 3 T13: -0.0303 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 3.1351 L22: 1.0706 REMARK 3 L33: 1.1796 L12: -0.3562 REMARK 3 L13: -0.1022 L23: 0.1713 REMARK 3 S TENSOR REMARK 3 S11: -0.0623 S12: -0.3184 S13: 0.0951 REMARK 3 S21: 0.2036 S22: 0.0989 S23: -0.1885 REMARK 3 S31: 0.0785 S32: 0.1229 S33: -0.0366 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 180 B 376 REMARK 3 ORIGIN FOR THE GROUP (A): 65.4539 8.8259 39.3979 REMARK 3 T TENSOR REMARK 3 T11: 0.0620 T22: 0.0489 REMARK 3 T33: 0.0323 T12: 0.0104 REMARK 3 T13: 0.0235 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 0.7114 L22: 1.3044 REMARK 3 L33: 0.6227 L12: -0.1354 REMARK 3 L13: 0.3239 L23: -0.2227 REMARK 3 S TENSOR REMARK 3 S11: -0.0412 S12: -0.0972 S13: 0.0685 REMARK 3 S21: 0.1521 S22: 0.0239 S23: -0.0111 REMARK 3 S31: -0.0058 S32: 0.0036 S33: 0.0173 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 4BRI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUN-13. REMARK 100 THE PDBE ID CODE IS EBI-57154. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9181 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (MX-225) REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73309 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.75 REMARK 200 RESOLUTION RANGE LOW (A) : 29.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.8 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.60 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.2 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM NAMES PH 5.5, 15% PEG3350, REMARK 280 10% PEG200 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.20550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 393 REMARK 465 LEU A 394 REMARK 465 GLU A 395 REMARK 465 HIS A 396 REMARK 465 HIS A 397 REMARK 465 HIS A 398 REMARK 465 HIS A 399 REMARK 465 HIS A 400 REMARK 465 HIS A 401 REMARK 465 MET B 34 REMARK 465 ASP B 35 REMARK 465 THR B 36 REMARK 465 LEU B 394 REMARK 465 GLU B 395 REMARK 465 HIS B 396 REMARK 465 HIS B 397 REMARK 465 HIS B 398 REMARK 465 HIS B 399 REMARK 465 HIS B 400 REMARK 465 HIS B 401 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 255 O HOH A 2197 2.19 REMARK 500 NE2A GLN A 333 O HOH A 2259 1.62 REMARK 500 NE2B GLN B 333 O HOH B 2174 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 365 CE1 TYR A 365 CZ 0.094 REMARK 500 TYR B 358 CG TYR B 358 CD1 0.082 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 122 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 MET A 234 CG - SD - CE ANGL. DEV. = 10.7 DEGREES REMARK 500 TYR A 356 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 122 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 122 NE - CZ - NH2 ANGL. DEV. = -8.7 DEGREES REMARK 500 MET B 234 CG - SD - CE ANGL. DEV. = 12.4 DEGREES REMARK 500 ASP B 326 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 118 -134.01 -118.39 REMARK 500 GLN A 145 -69.73 -107.83 REMARK 500 GLN A 258 73.11 -152.36 REMARK 500 VAL A 275 -64.43 -90.37 REMARK 500 ILE A 329 -61.98 -123.17 REMARK 500 ASP A 383 -159.22 -123.58 REMARK 500 HIS B 109 -157.05 -141.96 REMARK 500 THR B 118 -139.34 -118.67 REMARK 500 GLN B 258 76.21 -156.02 REMARK 500 ILE B 329 -58.36 -130.14 REMARK 500 ASP B 383 -155.21 -123.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 2-(N-MORPHOLINO)ETHANESULFONIC ACID (HMS): PH BUFFER MES REMARK 600 PHOSPHOAMINOPHOSPHONIC ACID-URIDYLATE ESTER (UNP): UMPPNP REMARK 600 UTP ANALOG REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1394 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2132 O REMARK 620 2 HOH A2005 O 85.4 REMARK 620 3 UNP A1393 O3G 96.0 174.9 REMARK 620 4 HOH A2120 O 85.2 91.4 93.7 REMARK 620 5 UNP A1393 O3B 91.2 87.3 87.7 176.3 REMARK 620 6 HOH A2004 O 166.8 85.0 94.4 86.1 97.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1396 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UNP B1395 O3G REMARK 620 2 HOH B2007 O 89.8 REMARK 620 3 HOH B2129 O 90.8 87.7 REMARK 620 4 UNP B1395 O3B 85.5 95.3 175.2 REMARK 620 5 HOH B2135 O 94.2 173.4 86.9 90.3 REMARK 620 6 HOH B2008 O 173.2 86.8 94.9 89.0 89.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNP A1393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1394 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A1395 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1394 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNP B1395 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B1396 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES B1397 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1396 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BQZ RELATED DB: PDB REMARK 900 RAT NTPDASE2 IN COMPLEX WITH MG GMPPNP REMARK 900 RELATED ID: 4BR0 RELATED DB: PDB REMARK 900 RAT NTPDASE2 IN COMPLEX WITH CAAMPNP REMARK 900 RELATED ID: 4BR2 RELATED DB: PDB REMARK 900 RAT NTPDASE2 IN COMPLEX WITH CA UMPPNP REMARK 900 RELATED ID: 4BR4 RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM I, OPEN, REMARK 900 APO REMARK 900 RELATED ID: 4BR5 RELATED DB: PDB REMARK 900 RNNTPDASE2 IN COMPLEX WITH ZNAMPPNP REMARK 900 RELATED ID: 4BR7 RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM I, OPEN, REMARK 900 APO REMARK 900 RELATED ID: 4BR9 RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II, CLOSED, REMARK 900 APO REMARK 900 RELATED ID: 4BRA RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II, CLOSED, REMARK 900 MG AMPPNP COMPLEX REMARK 900 RELATED ID: 4BRC RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II, CLOSED, REMARK 900 MG AMPNP COMPLEX REMARK 900 RELATED ID: 4BRD RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 Q193E CRYSTAL FORM II, REMARK 900 CLOSED, MG AMPPNP COMPLEX REMARK 900 RELATED ID: 4BRE RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II (CLOSED) REMARK 900 IN COMPLEX WITH TRANSITION STATE MIMIC ADENOSINE 5' REMARK 900 PHOSPHOVANADATE REMARK 900 RELATED ID: 4BRF RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II (CLOSED) REMARK 900 IN COMPLEX WITH A DISTORTED ORTHOMOLYBDATE ION AND AMP REMARK 900 RELATED ID: 4BRG RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II (CLOSED) REMARK 900 IN COMPLEX WITH MG GMPPNP REMARK 900 RELATED ID: 4BRH RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II (CLOSED) REMARK 900 IN COMPLEX WITH MG AND THIAMINE PHOSPHOVANADATE REMARK 900 RELATED ID: 4BRK RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 N302Y VARIANT CRYSTAL FORM REMARK 900 III (CLOSED) IN COMPLEX WITH MG UMPPNP REMARK 900 RELATED ID: 4BRL RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM III (CLOSED) REMARK 900 IN COMPLEX WITH TRANSITION STATE MIMI GUANOSINE 5'- REMARK 900 PHOSPHOVANADATE REMARK 900 RELATED ID: 4BRM RELATED DB: PDB REMARK 900 SULFUR SAD PHASING OF THE LEGIONELLA PNEUMOPHILA REMARK 900 NTPDASE1 - CRYSTAL FORM III (CLOSED) IN COMPLEX WITH REMARK 900 SULFATE REMARK 900 RELATED ID: 4BRN RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM III (CLOSED) REMARK 900 IN COMPLEX WITH MG AMP REMARK 900 RELATED ID: 4BRO RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM IV (PART- REMARK 900 OPEN) REMARK 900 RELATED ID: 4BRP RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM V (PART- REMARK 900 OPEN) REMARK 900 RELATED ID: 4BRQ RELATED DB: PDB REMARK 900 LEGIONELLA PNEUMOPHILA NTPDASE1 CRYSTAL FORM II, CLOSED, REMARK 900 IN COMPLEX WITH TWO PHOSPHATES BOUND TO ACTIVE SITE REMARK 900 MG AND PRODUCT AMP REMARK 900 RELATED ID: 3CJ1 RELATED DB: PDB REMARK 900 STRUCTURE OF RATTUS NORVEGICUS NTPDASE2 REMARK 900 RELATED ID: 3CJ7 RELATED DB: PDB REMARK 900 STRUCTURE OF RATTUS NORVEGICUS NTPDASE2 IN COMPLEX WITH AMP REMARK 900 RELATED ID: 3CJ9 RELATED DB: PDB REMARK 900 STRUCTURE OF RATTUS NORVEGICUS NTPDASE2 IN COMPLEX WITH CALCIUM, REMARK 900 AMP AND PHOSPHATE REMARK 900 RELATED ID: 3CJA RELATED DB: PDB REMARK 900 STRUCTURE OF RATTUS NORVEGICUS NTPDASE2 IN COMPLEX WITH REMARK 900 CALCIUM AND AMPPNP DBREF 4BRI A 35 393 UNP Q5ZUA2 Q5ZUA2_LEGPH 35 393 DBREF 4BRI B 35 393 UNP Q5ZUA2 Q5ZUA2_LEGPH 35 393 SEQADV 4BRI MET A 34 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI LEU A 394 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI GLU A 395 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS A 396 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS A 397 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS A 398 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS A 399 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS A 400 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS A 401 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI ASP A 137 UNP Q5ZUA2 GLU 137 CONFLICT SEQADV 4BRI VAL A 149 UNP Q5ZUA2 ALA 149 CONFLICT SEQADV 4BRI MET B 34 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI LEU B 394 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI GLU B 395 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS B 396 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS B 397 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS B 398 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS B 399 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS B 400 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI HIS B 401 UNP Q5ZUA2 EXPRESSION TAG SEQADV 4BRI ASP B 137 UNP Q5ZUA2 GLU 137 CONFLICT SEQADV 4BRI VAL B 149 UNP Q5ZUA2 ALA 149 CONFLICT SEQRES 1 A 368 MET ASP THR ASN PRO CYS GLU LYS HIS SER CYS ILE ALA SEQRES 2 A 368 VAL ILE ASP ALA GLY SER THR GLY SER ARG LEU HIS ILE SEQRES 3 A 368 TYR SER TYR ASP THR ASP ASP THR ASN THR PRO ILE HIS SEQRES 4 A 368 ILE GLU GLU ILE TRP ASN LYS LYS ILE LYS PRO GLY PHE SEQRES 5 A 368 ALA SER ILE GLN PRO ASN SER VAL THR ILE ASP ALA TYR SEQRES 6 A 368 LEU THR MET LEU LEU ALA ASP ALA PRO ILE HIS ASN ILE SEQRES 7 A 368 PRO VAL TYR PHE TYR ALA THR ALA GLY MET ARG LEU LEU SEQRES 8 A 368 PRO GLN SER GLN GLN LYS LYS TYR TYR ASP GLU LEU ASP SEQRES 9 A 368 TYR TRP PHE ARG GLN GLN SER GLN TRP GLN LEU VAL GLU SEQRES 10 A 368 ALA LYS THR ILE THR GLY ASN ASP GLU ALA LEU PHE ASP SEQRES 11 A 368 TRP LEU ALA VAL ASN TYR LYS LEU ASP THR LEU LYS SER SEQRES 12 A 368 VAL GLN ASN LYS SER VAL GLY VAL MET ASP MET GLY GLY SEQRES 13 A 368 ALA SER VAL GLN ILE VAL PHE PRO MET PRO LYS ASN ALA SEQRES 14 A 368 GLU ILE SER LYS HIS ASN GLN VAL GLU LEU ASN ILE TYR SEQRES 15 A 368 GLY GLN ASN ILE ASN LEU TYR VAL HIS SER PHE LEU GLY SEQRES 16 A 368 LEU GLY GLN THR GLU MET SER HIS GLN PHE LEU ASN SER SEQRES 17 A 368 PRO SER CYS PHE ALA ASN ASP TYR PRO LEU PRO ASP GLY SEQRES 18 A 368 GLU SER GLY GLN GLY ASN ALA PRO SER CYS LYS GLU GLU SEQRES 19 A 368 VAL THR SER LEU MET ASN SER VAL HIS LYS VAL ASN GLN SEQRES 20 A 368 GLN ILE GLN PRO LEU LEU ALA LEU ASN PRO VAL ASN GLU SEQRES 21 A 368 TRP TYR SER ILE GLY GLY ILE SER ASN LEU ALA SER SER SEQRES 22 A 368 GLN LEU PHE HIS PHE GLU ASN SER GLU LEU THR ASN GLN SEQRES 23 A 368 SER LEU LEU GLN GLN GLY ASP ASN GLN ILE CYS HIS GLN SEQRES 24 A 368 GLN TRP ASP ILE LEU ASN GLY GLN TYR PRO ASP ASP GLU SEQRES 25 A 368 TYR LEU TYR GLN TYR CYS LEU LEU SER SER TYR TYR TYR SEQRES 26 A 368 ALA LEU MET VAL ASP GLY TYR GLY ILE ASN PRO ASN GLN SEQRES 27 A 368 THR ILE HIS TYR ILE PRO PRO GLU GLN ASN LEU ASP TRP SEQRES 28 A 368 THR ILE GLY VAL VAL LEU HIS ARG ALA LEU GLU HIS HIS SEQRES 29 A 368 HIS HIS HIS HIS SEQRES 1 B 368 MET ASP THR ASN PRO CYS GLU LYS HIS SER CYS ILE ALA SEQRES 2 B 368 VAL ILE ASP ALA GLY SER THR GLY SER ARG LEU HIS ILE SEQRES 3 B 368 TYR SER TYR ASP THR ASP ASP THR ASN THR PRO ILE HIS SEQRES 4 B 368 ILE GLU GLU ILE TRP ASN LYS LYS ILE LYS PRO GLY PHE SEQRES 5 B 368 ALA SER ILE GLN PRO ASN SER VAL THR ILE ASP ALA TYR SEQRES 6 B 368 LEU THR MET LEU LEU ALA ASP ALA PRO ILE HIS ASN ILE SEQRES 7 B 368 PRO VAL TYR PHE TYR ALA THR ALA GLY MET ARG LEU LEU SEQRES 8 B 368 PRO GLN SER GLN GLN LYS LYS TYR TYR ASP GLU LEU ASP SEQRES 9 B 368 TYR TRP PHE ARG GLN GLN SER GLN TRP GLN LEU VAL GLU SEQRES 10 B 368 ALA LYS THR ILE THR GLY ASN ASP GLU ALA LEU PHE ASP SEQRES 11 B 368 TRP LEU ALA VAL ASN TYR LYS LEU ASP THR LEU LYS SER SEQRES 12 B 368 VAL GLN ASN LYS SER VAL GLY VAL MET ASP MET GLY GLY SEQRES 13 B 368 ALA SER VAL GLN ILE VAL PHE PRO MET PRO LYS ASN ALA SEQRES 14 B 368 GLU ILE SER LYS HIS ASN GLN VAL GLU LEU ASN ILE TYR SEQRES 15 B 368 GLY GLN ASN ILE ASN LEU TYR VAL HIS SER PHE LEU GLY SEQRES 16 B 368 LEU GLY GLN THR GLU MET SER HIS GLN PHE LEU ASN SER SEQRES 17 B 368 PRO SER CYS PHE ALA ASN ASP TYR PRO LEU PRO ASP GLY SEQRES 18 B 368 GLU SER GLY GLN GLY ASN ALA PRO SER CYS LYS GLU GLU SEQRES 19 B 368 VAL THR SER LEU MET ASN SER VAL HIS LYS VAL ASN GLN SEQRES 20 B 368 GLN ILE GLN PRO LEU LEU ALA LEU ASN PRO VAL ASN GLU SEQRES 21 B 368 TRP TYR SER ILE GLY GLY ILE SER ASN LEU ALA SER SER SEQRES 22 B 368 GLN LEU PHE HIS PHE GLU ASN SER GLU LEU THR ASN GLN SEQRES 23 B 368 SER LEU LEU GLN GLN GLY ASP ASN GLN ILE CYS HIS GLN SEQRES 24 B 368 GLN TRP ASP ILE LEU ASN GLY GLN TYR PRO ASP ASP GLU SEQRES 25 B 368 TYR LEU TYR GLN TYR CYS LEU LEU SER SER TYR TYR TYR SEQRES 26 B 368 ALA LEU MET VAL ASP GLY TYR GLY ILE ASN PRO ASN GLN SEQRES 27 B 368 THR ILE HIS TYR ILE PRO PRO GLU GLN ASN LEU ASP TRP SEQRES 28 B 368 THR ILE GLY VAL VAL LEU HIS ARG ALA LEU GLU HIS HIS SEQRES 29 B 368 HIS HIS HIS HIS HET UNP A1393 29 HET MG A1394 1 HET MES A1395 12 HET CL B1394 1 HET UNP B1395 29 HET MG B1396 1 HET MES B1397 12 HET CL A1396 1 HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM UNP 5'-O-[(R)-HYDROXY{[(S)- HETNAM 2 UNP HYDROXY(PHOSPHONOAMINO)PHOSPHORYL]OXY}PHOSPHORYL] HETNAM 3 UNP URIDINE FORMUL 2 MES 2(C6 H13 N O4 S) FORMUL 3 CL 2(CL 1-) FORMUL 4 MG 2(MG 2+) FORMUL 5 UNP 2(C9 H16 N3 O14 P3) FORMUL 6 HOH *543(H2 O) HELIX 1 1 ASN A 37 LYS A 41 5 5 HELIX 2 2 GLY A 84 ILE A 88 5 5 HELIX 3 3 ASN A 91 ALA A 104 1 14 HELIX 4 4 THR A 118 LEU A 123 1 6 HELIX 5 5 PRO A 125 GLN A 142 1 18 HELIX 6 6 THR A 155 LEU A 171 1 17 HELIX 7 7 SER A 205 HIS A 207 5 3 HELIX 8 8 GLY A 230 HIS A 236 1 7 HELIX 9 9 SER A 241 PHE A 245 5 5 HELIX 10 10 ASN A 260 SER A 274 1 15 HELIX 11 11 LYS A 277 ASN A 289 1 13 HELIX 12 12 GLY A 299 SER A 305 1 7 HELIX 13 13 THR A 317 ILE A 329 1 13 HELIX 14 14 GLN A 333 TYR A 341 1 9 HELIX 15 15 TYR A 346 TYR A 348 5 3 HELIX 16 16 GLN A 349 VAL A 362 1 14 HELIX 17 17 PRO A 377 ASN A 381 5 5 HELIX 18 18 THR A 385 ARG A 392 1 8 HELIX 19 19 ASN B 37 LYS B 41 5 5 HELIX 20 20 GLY B 84 ILE B 88 5 5 HELIX 21 21 ASN B 91 ALA B 104 1 14 HELIX 22 22 THR B 118 LEU B 123 1 6 HELIX 23 23 PRO B 125 GLN B 142 1 18 HELIX 24 24 THR B 155 LEU B 171 1 17 HELIX 25 25 SER B 205 HIS B 207 5 3 HELIX 26 26 GLY B 230 HIS B 236 1 7 HELIX 27 27 SER B 241 PHE B 245 5 5 HELIX 28 28 ASN B 260 SER B 274 1 15 HELIX 29 29 LYS B 277 ASN B 289 1 13 HELIX 30 30 GLY B 299 SER B 305 1 7 HELIX 31 31 THR B 317 ILE B 329 1 13 HELIX 32 32 GLN B 333 TYR B 341 1 9 HELIX 33 33 TYR B 346 TYR B 348 5 3 HELIX 34 34 GLN B 349 VAL B 362 1 14 HELIX 35 35 PRO B 377 ASN B 381 5 5 HELIX 36 36 THR B 385 HIS B 391 1 7 SHEET 1 AA 5 PRO A 70 ILE A 81 0 SHEET 2 AA 5 SER A 55 THR A 64 -1 O SER A 55 N ILE A 81 SHEET 3 AA 5 SER A 43 ALA A 50 -1 O SER A 43 N TYR A 62 SHEET 4 AA 5 PRO A 112 ALA A 117 1 O PRO A 112 N ALA A 46 SHEET 5 AA 5 GLN A 147 THR A 153 1 O GLN A 147 N VAL A 113 SHEET 1 AB 7 GLN A 209 ILE A 214 0 SHEET 2 AB 7 GLN A 217 LEU A 227 -1 O GLN A 217 N ILE A 214 SHEET 3 AB 7 SER A 191 PRO A 197 -1 O VAL A 192 N PHE A 226 SHEET 4 AB 7 VAL A 182 MET A 187 -1 O VAL A 184 N VAL A 195 SHEET 5 AB 7 GLU A 293 GLY A 298 1 O GLU A 293 N GLY A 183 SHEET 6 AB 7 ILE A 373 TYR A 375 1 O HIS A 374 N SER A 296 SHEET 7 AB 7 GLU A 315 LEU A 316 -1 O LEU A 316 N ILE A 373 SHEET 1 BA 5 PRO B 70 ILE B 81 0 SHEET 2 BA 5 SER B 55 THR B 64 -1 O SER B 55 N ILE B 81 SHEET 3 BA 5 SER B 43 ALA B 50 -1 O SER B 43 N TYR B 62 SHEET 4 BA 5 PRO B 112 ALA B 117 1 O PRO B 112 N ALA B 46 SHEET 5 BA 5 GLN B 147 THR B 153 1 O GLN B 147 N VAL B 113 SHEET 1 BB 7 GLN B 209 ILE B 214 0 SHEET 2 BB 7 GLN B 217 LEU B 227 -1 O GLN B 217 N ILE B 214 SHEET 3 BB 7 SER B 191 PRO B 197 -1 O VAL B 192 N PHE B 226 SHEET 4 BB 7 VAL B 182 MET B 187 -1 O VAL B 184 N VAL B 195 SHEET 5 BB 7 GLU B 293 GLY B 298 1 O GLU B 293 N GLY B 183 SHEET 6 BB 7 ILE B 373 TYR B 375 1 O HIS B 374 N SER B 296 SHEET 7 BB 7 GLU B 315 LEU B 316 -1 O LEU B 316 N ILE B 373 SSBOND 1 CYS A 39 CYS A 44 1555 1555 2.02 SSBOND 2 CYS A 244 CYS A 264 1555 1555 2.09 SSBOND 3 CYS A 330 CYS A 351 1555 1555 2.09 SSBOND 4 CYS B 39 CYS B 44 1555 1555 2.02 SSBOND 5 CYS B 244 CYS B 264 1555 1555 2.09 SSBOND 6 CYS B 330 CYS B 351 1555 1555 2.03 LINK MG MG A1394 O HOH A2132 1555 1555 2.06 LINK MG MG A1394 O HOH A2005 1555 1555 2.19 LINK MG MG A1394 O3G UNP A1393 1555 1555 1.94 LINK MG MG A1394 O HOH A2120 1555 1555 2.03 LINK MG MG A1394 O3B UNP A1393 1555 1555 2.09 LINK MG MG A1394 O HOH A2004 1555 1555 2.09 LINK MG MG B1396 O HOH B2007 1555 1555 2.20 LINK MG MG B1396 O HOH B2129 1555 1555 2.06 LINK MG MG B1396 O3B UNP B1395 1555 1555 2.06 LINK MG MG B1396 O HOH B2135 1555 1555 2.08 LINK MG MG B1396 O HOH B2008 1555 1555 2.11 LINK MG MG B1396 O3G UNP B1395 1555 1555 2.01 CISPEP 1 LYS A 82 PRO A 83 0 -4.77 CISPEP 2 LYS B 82 PRO B 83 0 1.57 SITE 1 AC1 27 GLY A 51 SER A 52 THR A 53 ARG A 56 SITE 2 AC1 27 LYS A 80 LYS A 82 THR A 118 ALA A 119 SITE 3 AC1 27 GLY A 189 ALA A 190 SER A 191 GLY A 298 SITE 4 AC1 27 GLY A 299 ASN A 302 PRO A 378 ASN A 381 SITE 5 AC1 27 MG A1394 HOH A2004 HOH A2005 HOH A2016 SITE 6 AC1 27 HOH A2018 HOH A2072 HOH A2119 HOH A2120 SITE 7 AC1 27 HOH A2132 HOH A2233 HOH A2277 SITE 1 AC2 5 UNP A1393 HOH A2004 HOH A2005 HOH A2120 SITE 2 AC2 5 HOH A2132 SITE 1 AC3 8 HIS A 224 PHE A 226 HIS A 276 GLN A 281 SITE 2 AC3 8 HOH A2154 HOH A2155 HOH A2280 GLU B 267 SITE 1 AC4 5 ARG A 122 GLY A 156 HOH A2078 ASN B 240 SITE 2 AC4 5 ASP B 253 SITE 1 AC5 29 GLY B 51 SER B 52 THR B 53 ARG B 56 SITE 2 AC5 29 LYS B 80 THR B 118 ALA B 119 GLU B 159 SITE 3 AC5 29 GLY B 189 ALA B 190 SER B 191 GLY B 298 SITE 4 AC5 29 GLY B 299 ASN B 302 PRO B 378 ASN B 381 SITE 5 AC5 29 MG B1396 HOH B2007 HOH B2008 HOH B2021 SITE 6 AC5 29 HOH B2022 HOH B2086 HOH B2128 HOH B2129 SITE 7 AC5 29 HOH B2135 HOH B2158 HOH B2215 HOH B2256 SITE 8 AC5 29 HOH B2257 SITE 1 AC6 5 UNP B1395 HOH B2007 HOH B2008 HOH B2129 SITE 2 AC6 5 HOH B2135 SITE 1 AC7 11 ASN A 240 GLU A 267 HOH A2171 HOH A2172 SITE 2 AC7 11 HIS B 224 PHE B 226 VAL B 275 HIS B 276 SITE 3 AC7 11 GLN B 281 HOH B2157 HOH B2194 SITE 1 AC8 4 ASN A 240 ASP A 253 ARG B 122 GLY B 156 CRYST1 62.457 86.411 72.186 90.00 106.53 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016011 0.000000 0.004752 0.00000 SCALE2 0.000000 0.011573 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014450 0.00000 MTRIX1 1 0.413000 0.082000 -0.907000 58.61100 1 MTRIX2 1 0.071000 -0.996000 -0.058000 2.95600 1 MTRIX3 1 -0.908000 -0.041000 -0.417000 91.70500 1