HEADER OXIDOREDUCTASE 14-JUN-13 4BT8 TITLE CRYSTAL STRUCTURE OF THE APO FORM OF N-TERMINAL DOMAIN AND PEPTIDE TITLE 2 SUBSTRATE BINDING DOMAIN OF PROLYL-4 HYDROXYLASE TYPE I FROM HUMAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: COLLAGEN BINDING DOMAIN, RESIDUES 18-255; COMPND 5 SYNONYM: 4-PH ALPHA-1, PROCOLLAGEN-PROLINE\,2-OXOGLUTARATE-4- COMPND 6 DIOXYGENASE SUBUNIT ALPHA-1, PROLYL-4 HYDROXYLASE TYPE I; COMPND 7 EC: 1.14.11.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS OXIDOREDUCTASE, TETRATRICOPEPTIDE REPEAT MOTIF, COILED-COIL EXPDTA X-RAY DIFFRACTION AUTHOR J.ANANTHARAJAN,M.K.KOSKI,R.K.WIERENGA REVDAT 5 20-DEC-23 4BT8 1 REMARK REVDAT 4 25-DEC-13 4BT8 1 JRNL REVDAT 3 20-NOV-13 4BT8 1 JRNL REVDAT 2 16-OCT-13 4BT8 1 COMPND JRNL REVDAT 1 09-OCT-13 4BT8 0 JRNL AUTH J.ANANTHARAJAN,M.K.KOSKI,P.KURSULA,R.HIETA,U.BERGMANN, JRNL AUTH 2 J.MYLLYHARJU,R.K.WIERENGA JRNL TITL THE STRUCTURAL MOTIFS FOR SUBSTRATE BINDING AND DIMERIZATION JRNL TITL 2 OF THE ALPHA SUBUNIT OF COLLAGEN PROLYL 4-HYDROXYLASE JRNL REF STRUCTURE V. 21 2107 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 24207127 JRNL DOI 10.1016/J.STR.2013.09.005 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 25785 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1301 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6416 - 4.5705 0.96 2820 153 0.1885 0.2097 REMARK 3 2 4.5705 - 3.6281 0.99 2765 146 0.1826 0.2414 REMARK 3 3 3.6281 - 3.1696 0.97 2697 143 0.2114 0.2456 REMARK 3 4 3.1696 - 2.8798 1.00 2727 145 0.2406 0.3119 REMARK 3 5 2.8798 - 2.6734 0.99 2733 147 0.2461 0.3137 REMARK 3 6 2.6734 - 2.5158 0.99 2701 139 0.2794 0.3596 REMARK 3 7 2.5158 - 2.3898 0.99 2717 145 0.2898 0.3560 REMARK 3 8 2.3898 - 2.2858 1.00 2705 145 0.3083 0.3326 REMARK 3 9 2.2858 - 2.1978 0.96 2619 138 0.3395 0.3701 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3754 REMARK 3 ANGLE : 1.182 5070 REMARK 3 CHIRALITY : 0.069 570 REMARK 3 PLANARITY : 0.006 649 REMARK 3 DIHEDRAL : 14.997 1414 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 7 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5977 12.1124 -36.6302 REMARK 3 T TENSOR REMARK 3 T11: 0.3307 T22: 0.1250 REMARK 3 T33: 0.3770 T12: 0.0217 REMARK 3 T13: 0.0593 T23: -0.0486 REMARK 3 L TENSOR REMARK 3 L11: 7.7551 L22: 0.4914 REMARK 3 L33: 2.1959 L12: -0.2541 REMARK 3 L13: -1.3472 L23: -0.4599 REMARK 3 S TENSOR REMARK 3 S11: -0.0794 S12: 0.4637 S13: -1.0491 REMARK 3 S21: -0.0905 S22: -0.1740 S23: -0.0050 REMARK 3 S31: 0.4141 S32: 0.0668 S33: 0.2476 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 107 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.3770 13.6898 -3.9517 REMARK 3 T TENSOR REMARK 3 T11: 0.8002 T22: 1.2697 REMARK 3 T33: 0.3948 T12: -0.4197 REMARK 3 T13: 0.2244 T23: -0.0741 REMARK 3 L TENSOR REMARK 3 L11: 1.6355 L22: 1.6718 REMARK 3 L33: 6.0303 L12: 0.7177 REMARK 3 L13: -0.3892 L23: 0.1242 REMARK 3 S TENSOR REMARK 3 S11: 1.2507 S12: -1.1134 S13: 0.0559 REMARK 3 S21: 0.2740 S22: -1.1205 S23: 0.3020 REMARK 3 S31: -0.5462 S32: 0.4998 S33: 0.0086 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 202 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2525 18.3528 14.7769 REMARK 3 T TENSOR REMARK 3 T11: 1.0044 T22: 1.1553 REMARK 3 T33: 0.4576 T12: -0.5079 REMARK 3 T13: -0.1463 T23: 0.1380 REMARK 3 L TENSOR REMARK 3 L11: 6.2954 L22: 2.4664 REMARK 3 L33: 7.6779 L12: -1.5824 REMARK 3 L13: -5.0459 L23: 1.6154 REMARK 3 S TENSOR REMARK 3 S11: -0.8168 S12: 0.9076 S13: 0.1462 REMARK 3 S21: 0.3713 S22: 0.2280 S23: -0.0860 REMARK 3 S31: 1.1365 S32: 0.0369 S33: 0.3699 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 7 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5016 8.1985 -28.5644 REMARK 3 T TENSOR REMARK 3 T11: 0.3105 T22: 0.3051 REMARK 3 T33: 0.5383 T12: -0.0074 REMARK 3 T13: 0.0250 T23: 0.0890 REMARK 3 L TENSOR REMARK 3 L11: 2.4344 L22: 1.9856 REMARK 3 L33: 2.0682 L12: 0.9800 REMARK 3 L13: -3.8982 L23: -0.5583 REMARK 3 S TENSOR REMARK 3 S11: 0.1830 S12: -0.0222 S13: -1.5875 REMARK 3 S21: 0.1410 S22: -0.2656 S23: 0.0533 REMARK 3 S31: 0.1469 S32: -0.2481 S33: 0.1674 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 63 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6063 13.1170 -18.8689 REMARK 3 T TENSOR REMARK 3 T11: 0.4964 T22: 1.0305 REMARK 3 T33: 0.2032 T12: -0.3088 REMARK 3 T13: 0.2430 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 3.2354 L22: 5.2792 REMARK 3 L33: 8.2013 L12: -0.7594 REMARK 3 L13: 2.0708 L23: -1.9973 REMARK 3 S TENSOR REMARK 3 S11: 0.2329 S12: -0.8855 S13: 0.1912 REMARK 3 S21: 0.6544 S22: 0.2503 S23: 1.0538 REMARK 3 S31: 1.3335 S32: -1.4925 S33: -0.6882 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 76 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5977 19.5259 -29.0521 REMARK 3 T TENSOR REMARK 3 T11: 0.2545 T22: 0.3832 REMARK 3 T33: 0.2998 T12: 0.0043 REMARK 3 T13: 0.0472 T23: 0.0579 REMARK 3 L TENSOR REMARK 3 L11: 2.3231 L22: 2.2071 REMARK 3 L33: 1.5788 L12: 3.9633 REMARK 3 L13: -3.8737 L23: -1.8128 REMARK 3 S TENSOR REMARK 3 S11: 0.3125 S12: -1.7933 S13: -0.8130 REMARK 3 S21: 0.0521 S22: -0.5664 S23: -0.3612 REMARK 3 S31: 0.1059 S32: 0.5123 S33: 0.2093 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 107 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.1781 16.8205 -52.2147 REMARK 3 T TENSOR REMARK 3 T11: 0.8034 T22: 0.7750 REMARK 3 T33: 0.4611 T12: 0.1702 REMARK 3 T13: 0.1629 T23: 0.1768 REMARK 3 L TENSOR REMARK 3 L11: 8.0829 L22: 2.1279 REMARK 3 L33: 8.2057 L12: -9.8051 REMARK 3 L13: -7.8744 L23: 9.0278 REMARK 3 S TENSOR REMARK 3 S11: 0.7895 S12: 0.8172 S13: 0.7616 REMARK 3 S21: -0.4112 S22: -0.7185 S23: -1.0535 REMARK 3 S31: -1.7144 S32: 0.7820 S33: -0.1188 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 124 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5995 1.7768 -52.4391 REMARK 3 T TENSOR REMARK 3 T11: 0.5297 T22: 0.7813 REMARK 3 T33: 0.4398 T12: 0.1899 REMARK 3 T13: 0.0668 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 2.0761 L22: 8.0242 REMARK 3 L33: 1.0521 L12: -4.1736 REMARK 3 L13: 2.3787 L23: -1.4662 REMARK 3 S TENSOR REMARK 3 S11: 0.0923 S12: -0.3132 S13: -0.7766 REMARK 3 S21: -0.4458 S22: -0.1903 S23: -0.0204 REMARK 3 S31: 0.0587 S32: 0.1058 S33: 0.2776 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESID 147 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.3687 13.3141 -60.9367 REMARK 3 T TENSOR REMARK 3 T11: 0.5299 T22: 0.8082 REMARK 3 T33: 0.3765 T12: 0.3181 REMARK 3 T13: 0.1105 T23: 0.0871 REMARK 3 L TENSOR REMARK 3 L11: 6.9661 L22: 5.2955 REMARK 3 L33: 3.1695 L12: 4.0603 REMARK 3 L13: -0.0104 L23: -1.6537 REMARK 3 S TENSOR REMARK 3 S11: 0.3320 S12: 1.2498 S13: 0.4865 REMARK 3 S21: -0.1847 S22: -0.1776 S23: 0.2243 REMARK 3 S31: -0.1667 S32: -0.4917 S33: -0.1624 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESID 179 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2996 13.6687 -65.2521 REMARK 3 T TENSOR REMARK 3 T11: 0.6536 T22: 1.1229 REMARK 3 T33: 0.4863 T12: 0.3387 REMARK 3 T13: 0.0847 T23: 0.1759 REMARK 3 L TENSOR REMARK 3 L11: 8.5515 L22: 0.5777 REMARK 3 L33: 8.1029 L12: 1.1688 REMARK 3 L13: -7.8325 L23: -0.6720 REMARK 3 S TENSOR REMARK 3 S11: 0.5315 S12: 1.3243 S13: 0.2723 REMARK 3 S21: -0.4027 S22: -0.1050 S23: 0.3430 REMARK 3 S31: 0.0670 S32: -0.6327 S33: -0.0962 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESID 202 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3485 17.5213 -78.1626 REMARK 3 T TENSOR REMARK 3 T11: 0.8303 T22: 1.1304 REMARK 3 T33: 0.4033 T12: 0.3898 REMARK 3 T13: -0.0436 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 6.8639 L22: 4.8856 REMARK 3 L33: 2.1608 L12: 3.7808 REMARK 3 L13: -4.6037 L23: -3.3341 REMARK 3 S TENSOR REMARK 3 S11: -0.2993 S12: -1.3794 S13: -0.0892 REMARK 3 S21: -0.8159 S22: -0.1108 S23: 0.0625 REMARK 3 S31: 0.4805 S32: 0.0425 S33: 0.5034 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE NUMBERING SHOULD START WITH 0 FROM REMARK 3 THE INITIAL METHIONINE REMARK 4 REMARK 4 4BT8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1290057190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25805 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 48.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.85 REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2YQ8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25-30% PEG400, 10% ISOPROPANOL, 100MM REMARK 280 HEPES PH 7.5, 5MM SPERMINE HCL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 35.96950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.70150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.96950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.70150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 HIS A 1 REMARK 465 PRO A 2 REMARK 465 GLY A 3 REMARK 465 PHE A 4 REMARK 465 PHE A 5 REMARK 465 THR A 6 REMARK 465 GLY A 134 REMARK 465 ASN A 135 REMARK 465 LEU A 136 REMARK 465 PRO A 137 REMARK 465 GLY A 138 REMARK 465 VAL A 139 REMARK 465 LYS A 140 REMARK 465 HIS A 141 REMARK 465 LYS A 142 REMARK 465 SER A 143 REMARK 465 MET B 0 REMARK 465 HIS B 1 REMARK 465 PRO B 2 REMARK 465 GLY B 3 REMARK 465 PHE B 4 REMARK 465 PHE B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 47 O HOH B 2009 2.08 REMARK 500 OG SER A 90 O HOH A 2030 2.16 REMARK 500 O HOH B 2011 O HOH B 2012 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 95 NZ LYS B 237 4453 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 56 85.73 -155.67 REMARK 500 THR A 76 -51.20 -120.79 REMARK 500 ASN A 106 -165.13 -112.19 REMARK 500 LEU B 49 -71.09 -53.60 REMARK 500 ASP B 56 81.13 -157.40 REMARK 500 THR B 76 -51.89 -125.54 REMARK 500 ASN B 106 -167.69 -111.09 REMARK 500 ASN B 135 88.48 -61.09 REMARK 500 HIS B 221 109.18 -57.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BT9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PEPTIDE(PRO-PRO-GLY)3 BOUND COMPLEX OF N- REMARK 900 TERMINAL DOMAIN AND PEPTIDE SUBSTRATE BINDING DOMAIN OF PROLYL-4 REMARK 900 HYDROXYLASE (RESIDUES 1-238 ) TYPE I FROM HUMAN REMARK 900 RELATED ID: 4BTA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PEPTIDE(PRO-PRO-GLY)3 BOUND COMPLEX OF N- REMARK 900 TERMINAL DOMAIN AND PEPTIDE SUBSTRATE BINDING DOMAIN OF PROLYL-4 REMARK 900 HYDROXYLASE (RESIDUES 1-244 ) TYPE I FROM HUMAN REMARK 900 RELATED ID: 4BTB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PEPTIDE(PRO)9 BOUND COMPLEX OF N-TERMINAL REMARK 900 DOMAIN AND PEPTIDE SUBSTRATE BINDING DOMAIN OF PROLYL-4 HYDROXYLASE REMARK 900 (RESIDUES 1-238) TYPE I FROM HUMAN DBREF 4BT8 A 1 238 UNP P13674 P4HA1_HUMAN 18 255 DBREF 4BT8 B 1 238 UNP P13674 P4HA1_HUMAN 18 255 SEQADV 4BT8 MET A 0 UNP P13674 EXPRESSION TAG SEQADV 4BT8 MET B 0 UNP P13674 EXPRESSION TAG SEQRES 1 A 239 MET HIS PRO GLY PHE PHE THR SER ILE GLY GLN MET THR SEQRES 2 A 239 ASP LEU ILE HIS THR GLU LYS ASP LEU VAL THR SER LEU SEQRES 3 A 239 LYS ASP TYR ILE LYS ALA GLU GLU ASP LYS LEU GLU GLN SEQRES 4 A 239 ILE LYS LYS TRP ALA GLU LYS LEU ASP ARG LEU THR SER SEQRES 5 A 239 THR ALA THR LYS ASP PRO GLU GLY PHE VAL GLY HIS PRO SEQRES 6 A 239 VAL ASN ALA PHE LYS LEU MET LYS ARG LEU ASN THR GLU SEQRES 7 A 239 TRP SER GLU LEU GLU ASN LEU VAL LEU LYS ASP MET SER SEQRES 8 A 239 ASP GLY PHE ILE SER ASN LEU THR ILE GLN ARG GLN TYR SEQRES 9 A 239 PHE PRO ASN ASP GLU ASP GLN VAL GLY ALA ALA LYS ALA SEQRES 10 A 239 LEU LEU ARG LEU GLN ASP THR TYR ASN LEU ASP THR ASP SEQRES 11 A 239 THR ILE SER LYS GLY ASN LEU PRO GLY VAL LYS HIS LYS SEQRES 12 A 239 SER PHE LEU THR ALA GLU ASP CYS PHE GLU LEU GLY LYS SEQRES 13 A 239 VAL ALA TYR THR GLU ALA ASP TYR TYR HIS THR GLU LEU SEQRES 14 A 239 TRP MET GLU GLN ALA LEU ARG GLN LEU ASP GLU GLY GLU SEQRES 15 A 239 ILE SER THR ILE ASP LYS VAL SER VAL LEU ASP TYR LEU SEQRES 16 A 239 SER TYR ALA VAL TYR GLN GLN GLY ASP LEU ASP LYS ALA SEQRES 17 A 239 LEU LEU LEU THR LYS LYS LEU LEU GLU LEU ASP PRO GLU SEQRES 18 A 239 HIS GLN ARG ALA ASN GLY ASN LEU LYS TYR PHE GLU TYR SEQRES 19 A 239 ILE MET ALA LYS GLU SEQRES 1 B 239 MET HIS PRO GLY PHE PHE THR SER ILE GLY GLN MET THR SEQRES 2 B 239 ASP LEU ILE HIS THR GLU LYS ASP LEU VAL THR SER LEU SEQRES 3 B 239 LYS ASP TYR ILE LYS ALA GLU GLU ASP LYS LEU GLU GLN SEQRES 4 B 239 ILE LYS LYS TRP ALA GLU LYS LEU ASP ARG LEU THR SER SEQRES 5 B 239 THR ALA THR LYS ASP PRO GLU GLY PHE VAL GLY HIS PRO SEQRES 6 B 239 VAL ASN ALA PHE LYS LEU MET LYS ARG LEU ASN THR GLU SEQRES 7 B 239 TRP SER GLU LEU GLU ASN LEU VAL LEU LYS ASP MET SER SEQRES 8 B 239 ASP GLY PHE ILE SER ASN LEU THR ILE GLN ARG GLN TYR SEQRES 9 B 239 PHE PRO ASN ASP GLU ASP GLN VAL GLY ALA ALA LYS ALA SEQRES 10 B 239 LEU LEU ARG LEU GLN ASP THR TYR ASN LEU ASP THR ASP SEQRES 11 B 239 THR ILE SER LYS GLY ASN LEU PRO GLY VAL LYS HIS LYS SEQRES 12 B 239 SER PHE LEU THR ALA GLU ASP CYS PHE GLU LEU GLY LYS SEQRES 13 B 239 VAL ALA TYR THR GLU ALA ASP TYR TYR HIS THR GLU LEU SEQRES 14 B 239 TRP MET GLU GLN ALA LEU ARG GLN LEU ASP GLU GLY GLU SEQRES 15 B 239 ILE SER THR ILE ASP LYS VAL SER VAL LEU ASP TYR LEU SEQRES 16 B 239 SER TYR ALA VAL TYR GLN GLN GLY ASP LEU ASP LYS ALA SEQRES 17 B 239 LEU LEU LEU THR LYS LYS LEU LEU GLU LEU ASP PRO GLU SEQRES 18 B 239 HIS GLN ARG ALA ASN GLY ASN LEU LYS TYR PHE GLU TYR SEQRES 19 B 239 ILE MET ALA LYS GLU FORMUL 3 HOH *81(H2 O) HELIX 1 1 SER A 7 ASP A 56 1 50 HELIX 2 2 ASP A 56 VAL A 61 1 6 HELIX 3 3 HIS A 63 THR A 76 1 14 HELIX 4 4 THR A 76 LEU A 86 1 11 HELIX 5 5 SER A 90 ARG A 101 1 12 HELIX 6 6 GLN A 102 PHE A 104 5 3 HELIX 7 7 ASN A 106 TYR A 124 1 19 HELIX 8 8 ASP A 127 LYS A 133 1 7 HELIX 9 9 THR A 146 GLU A 160 1 15 HELIX 10 10 ASP A 162 GLU A 179 1 18 HELIX 11 11 ASP A 186 GLY A 202 1 17 HELIX 12 12 ASP A 203 ASP A 218 1 16 HELIX 13 13 HIS A 221 LYS A 237 1 17 HELIX 14 14 SER B 7 ASP B 56 1 50 HELIX 15 15 ASP B 56 VAL B 61 1 6 HELIX 16 16 HIS B 63 THR B 76 1 14 HELIX 17 17 THR B 76 LEU B 86 1 11 HELIX 18 18 SER B 90 ARG B 101 1 12 HELIX 19 19 GLN B 102 PHE B 104 5 3 HELIX 20 20 ASN B 106 TYR B 124 1 19 HELIX 21 21 ASP B 127 LYS B 133 1 7 HELIX 22 22 THR B 146 GLU B 160 1 15 HELIX 23 23 ASP B 162 GLU B 179 1 18 HELIX 24 24 ASP B 186 GLY B 202 1 17 HELIX 25 25 ASP B 203 ASP B 218 1 16 HELIX 26 26 HIS B 221 LYS B 237 1 17 CRYST1 71.939 105.403 65.991 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013901 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009487 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015154 0.00000