data_4BU2 # _entry.id 4BU2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.303 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4BU2 PDBE EBI-57341 WWPDB D_1290057341 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2XDV unspecified 'CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF FLJ14393' PDB 4BXF unspecified ;60S RIBOSOMAL PROTEIN L27A HISTIDINE HYDROXYLASE (MINA53 Y209C) IN COMPLEX WITH MN(II), 2-OXOGLUTARATE (2OG) AND 60S RIBOSOMAL PROTEIN L27A (RPL27A G37C) PEPTIDE FRAGMENT ; PDB 4CCJ unspecified '60S RIBOSOMAL PROTEIN L8 HISTIDINE HYDROXYLASE (NO66) IN APO FORM' PDB 4CCK unspecified '60S RIBOSOMAL PROTEIN L8 HISTIDINE HYDROXYLASE (NO66) IN COMPLEX WITH MN(II) AND N-OXALYLGLYCINE (NOG)' PDB 4CCM unspecified ;60S RIBOSOMAL PROTEIN L8 HISTIDINE HYDROXYLASE (NO66) IN COMPLEX WITH MN(II), N-OXALYLGLYCINE (NOG) AND 60S RIBOSOMAL PROTEIN L8 (RPL8 G220C) PEPTIDE FRAGMENT ( COMPLEX-1) ; PDB 4CCN unspecified ;60S RIBOSOMAL PROTEIN L8 HISTIDINE HYDROXYLASE (NO66 L299C/C300S) IN COMPLEX WITH MN(II), N-OXALYLGLYCINE (NOG) AND 60S RIBOSOMAL PROTEIN L8 (RPL8 G220C) PEPTIDE FRAGMENT (COMPLEX-2) ; PDB 4CCO unspecified ;60S RIBOSOMAL PROTEIN L8 HISTIDINE HYDROXYLASE (NO66 S373C) IN COMPLEX WITH MN(II), N-OXALYLGLYCINE (NOG) AND 60S RIBOSOMAL PROTEIN L8 (RPL8 G214C) PEPTIDE FRAGMENT (COMPLEX-3) ; PDB 4DIQ unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4BU2 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-06-19 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chowdhury, R.' 1 ? 'Clifton, I.J.' 2 ? 'McDonough, M.A.' 3 ? 'Ng, S.S.' 4 ? 'Pilka, E.' 5 ? 'Oppermann, U.' 6 ? 'Schofield, C.J.' 7 ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Ribosomal oxygenases are structurally conserved from prokaryotes to humans.' Nature 510 422 426 2014 NATUAS UK 1476-4687 0006 ? 24814345 10.1038/nature13263 1 'Oxygenase-Catalyzed Ribosome Hydroxylation Occurs in Prokaryotes and Humans.' Nat.Chem.Biol. 8 960 ? 2012 ? US 1552-4450 ? ? 23103944 10.1038/NCHEMBIO.1093 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chowdhury, R.' 1 ? primary 'Sekirnik, R.' 2 ? primary 'Brissett, N.C.' 3 ? primary 'Krojer, T.' 4 ? primary 'Ho, C.H.' 5 ? primary 'Ng, S.S.' 6 ? primary 'Clifton, I.J.' 7 ? primary 'Ge, W.' 8 ? primary 'Kershaw, N.J.' 9 ? primary 'Fox, G.C.' 10 ? primary 'Muniz, J.R.C.' 11 ? primary 'Vollmar, M.' 12 ? primary 'Phillips, C.' 13 ? primary 'Pilka, E.S.' 14 ? primary 'Kavanagh, K.L.' 15 ? primary 'von Delft, F.' 16 ? primary 'Oppermann, U.' 17 ? primary 'McDonough, M.A.' 18 ? primary 'Doherty, A.J.' 19 ? primary 'Schofield, C.J.' 20 ? 1 'Ge, W.' 21 ? 1 'Wolf, A.' 22 ? 1 'Feng, T.' 23 ? 1 'Ho, C.' 24 ? 1 'Sekirnik, R.' 25 ? 1 'Zayer, A.' 26 ? 1 'Granatino, N.' 27 ? 1 'Cockman, M.E.' 28 ? 1 'Loenarz, C.' 29 ? 1 'Loik, N.D.' 30 ? 1 'Hardy, A.P.' 31 ? 1 'Claridge, T.D.W.' 32 ? 1 'Hamed, R.B.' 33 ? 1 'Chowdhury, R.' 34 ? 1 'Gong, L.' 35 ? 1 'Robinson, C.V.' 36 ? 1 'Trudgian, D.C.' 37 ? 1 'Jiang, M.' 38 ? 1 'Mackeen, M.M.' 39 ? 1 'Mccullagh, J.S.' 40 ? 1 'Gordiyenko, Y.' 41 ? 1 'Thalhammer, A.' 42 ? 1 'Yamamoto, A.' 43 ? 1 'Yang, M.' 44 ? 1 'Liu-Yi, P.' 45 ? 1 'Zhang, Z.' 46 ? 1 'Schmidt-Zachmann, M.' 47 ? 1 'Kessler, B.M.' 48 ? 1 'Ratcliffe, P.J.' 49 ? 1 'Preston, G.M.' 50 ? 1 'Coleman, M.L.' 51 ? 1 'Schofield, C.J.' 52 ? # _cell.entry_id 4BU2 _cell.length_a 184.632 _cell.length_b 184.632 _cell.length_c 184.632 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BU2 _symmetry.space_group_name_H-M 'P 43 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BIFUNCTIONAL LYSINE-SPECIFIC DEMETHYLASE AND HISTIDYL-HYDROXYLASE MINA' 50837.426 1 1.14.11.- YES 'CATALYTIC DOMAIN, RESIDUES 26-465' ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 3 non-polymer syn '2-OXOGLUTARIC ACID' 146.098 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 5 water nat water 18.015 122 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;60S RIBOSOMAL PROTEIN L27A HISTIDINE HYDROXYLASE MINA, HISTONE RPL27A HISTIDINE HYDROXYLASE MINA, LYSINE DEMETHYLASE MINA, MYC-INDUCED NUCLEAR ANTIGEN, MINERAL DUST-INDUCED GENE PROTEIN, NUCLEOLAR PROTEIN 52, RIBOSOMAL OXYGENASE MINA, ROX ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;S(MSE)AAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIQRDDPALATYYGSLFKLTDLKSLCSRG(MSE)Y YGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQG LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEF(MSE)LKPGDLLYFPRGTIHQADTPAGLAHS THVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLQVESTTVATRRLSGFLRTLADRLEGTKELLSSD (MSE)KKDFI(MSE)HRLPPYSAGDGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDETQEK(MSE)VYIYHSL KNSRETH(MSE)(MSE)GNEEETEFHGLRFPLSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV ; _entity_poly.pdbx_seq_one_letter_code_can ;SMAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVC RCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDV EVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNS WGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLQVESTTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYS AGDGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDETQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFPLSH LDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MSE n 1 3 ALA n 1 4 ALA n 1 5 GLY n 1 6 GLY n 1 7 PRO n 1 8 SER n 1 9 ALA n 1 10 LEU n 1 11 ASN n 1 12 PHE n 1 13 ASP n 1 14 SER n 1 15 PRO n 1 16 SER n 1 17 SER n 1 18 LEU n 1 19 PHE n 1 20 GLU n 1 21 SER n 1 22 LEU n 1 23 ILE n 1 24 SER n 1 25 PRO n 1 26 ILE n 1 27 LYS n 1 28 THR n 1 29 GLU n 1 30 THR n 1 31 PHE n 1 32 PHE n 1 33 LYS n 1 34 GLU n 1 35 PHE n 1 36 TRP n 1 37 GLU n 1 38 GLN n 1 39 LYS n 1 40 PRO n 1 41 LEU n 1 42 LEU n 1 43 ILE n 1 44 GLN n 1 45 ARG n 1 46 ASP n 1 47 ASP n 1 48 PRO n 1 49 ALA n 1 50 LEU n 1 51 ALA n 1 52 THR n 1 53 TYR n 1 54 TYR n 1 55 GLY n 1 56 SER n 1 57 LEU n 1 58 PHE n 1 59 LYS n 1 60 LEU n 1 61 THR n 1 62 ASP n 1 63 LEU n 1 64 LYS n 1 65 SER n 1 66 LEU n 1 67 CYS n 1 68 SER n 1 69 ARG n 1 70 GLY n 1 71 MSE n 1 72 TYR n 1 73 TYR n 1 74 GLY n 1 75 ARG n 1 76 ASP n 1 77 VAL n 1 78 ASN n 1 79 VAL n 1 80 CYS n 1 81 ARG n 1 82 CYS n 1 83 VAL n 1 84 ASN n 1 85 GLY n 1 86 LYS n 1 87 LYS n 1 88 LYS n 1 89 VAL n 1 90 LEU n 1 91 ASN n 1 92 LYS n 1 93 ASP n 1 94 GLY n 1 95 LYS n 1 96 ALA n 1 97 HIS n 1 98 PHE n 1 99 LEU n 1 100 GLN n 1 101 LEU n 1 102 ARG n 1 103 LYS n 1 104 ASP n 1 105 PHE n 1 106 ASP n 1 107 GLN n 1 108 LYS n 1 109 ARG n 1 110 ALA n 1 111 THR n 1 112 ILE n 1 113 GLN n 1 114 PHE n 1 115 HIS n 1 116 GLN n 1 117 PRO n 1 118 GLN n 1 119 ARG n 1 120 PHE n 1 121 LYS n 1 122 ASP n 1 123 GLU n 1 124 LEU n 1 125 TRP n 1 126 ARG n 1 127 ILE n 1 128 GLN n 1 129 GLU n 1 130 LYS n 1 131 LEU n 1 132 GLU n 1 133 CYS n 1 134 TYR n 1 135 PHE n 1 136 GLY n 1 137 SER n 1 138 LEU n 1 139 VAL n 1 140 GLY n 1 141 SER n 1 142 ASN n 1 143 VAL n 1 144 TYR n 1 145 ILE n 1 146 THR n 1 147 PRO n 1 148 ALA n 1 149 GLY n 1 150 SER n 1 151 GLN n 1 152 GLY n 1 153 LEU n 1 154 PRO n 1 155 PRO n 1 156 HIS n 1 157 TYR n 1 158 ASP n 1 159 ASP n 1 160 VAL n 1 161 GLU n 1 162 VAL n 1 163 PHE n 1 164 ILE n 1 165 LEU n 1 166 GLN n 1 167 LEU n 1 168 GLU n 1 169 GLY n 1 170 GLU n 1 171 LYS n 1 172 HIS n 1 173 TRP n 1 174 ARG n 1 175 LEU n 1 176 TYR n 1 177 HIS n 1 178 PRO n 1 179 THR n 1 180 VAL n 1 181 PRO n 1 182 LEU n 1 183 ALA n 1 184 ARG n 1 185 GLU n 1 186 TYR n 1 187 SER n 1 188 VAL n 1 189 GLU n 1 190 ALA n 1 191 GLU n 1 192 GLU n 1 193 ARG n 1 194 ILE n 1 195 GLY n 1 196 ARG n 1 197 PRO n 1 198 VAL n 1 199 HIS n 1 200 GLU n 1 201 PHE n 1 202 MSE n 1 203 LEU n 1 204 LYS n 1 205 PRO n 1 206 GLY n 1 207 ASP n 1 208 LEU n 1 209 LEU n 1 210 TYR n 1 211 PHE n 1 212 PRO n 1 213 ARG n 1 214 GLY n 1 215 THR n 1 216 ILE n 1 217 HIS n 1 218 GLN n 1 219 ALA n 1 220 ASP n 1 221 THR n 1 222 PRO n 1 223 ALA n 1 224 GLY n 1 225 LEU n 1 226 ALA n 1 227 HIS n 1 228 SER n 1 229 THR n 1 230 HIS n 1 231 VAL n 1 232 THR n 1 233 ILE n 1 234 SER n 1 235 THR n 1 236 TYR n 1 237 GLN n 1 238 ASN n 1 239 ASN n 1 240 SER n 1 241 TRP n 1 242 GLY n 1 243 ASP n 1 244 PHE n 1 245 LEU n 1 246 LEU n 1 247 ASP n 1 248 THR n 1 249 ILE n 1 250 SER n 1 251 GLY n 1 252 LEU n 1 253 VAL n 1 254 PHE n 1 255 ASP n 1 256 THR n 1 257 ALA n 1 258 LYS n 1 259 GLU n 1 260 ASP n 1 261 VAL n 1 262 GLU n 1 263 LEU n 1 264 ARG n 1 265 THR n 1 266 GLY n 1 267 ILE n 1 268 PRO n 1 269 ARG n 1 270 GLN n 1 271 LEU n 1 272 LEU n 1 273 LEU n 1 274 GLN n 1 275 VAL n 1 276 GLU n 1 277 SER n 1 278 THR n 1 279 THR n 1 280 VAL n 1 281 ALA n 1 282 THR n 1 283 ARG n 1 284 ARG n 1 285 LEU n 1 286 SER n 1 287 GLY n 1 288 PHE n 1 289 LEU n 1 290 ARG n 1 291 THR n 1 292 LEU n 1 293 ALA n 1 294 ASP n 1 295 ARG n 1 296 LEU n 1 297 GLU n 1 298 GLY n 1 299 THR n 1 300 LYS n 1 301 GLU n 1 302 LEU n 1 303 LEU n 1 304 SER n 1 305 SER n 1 306 ASP n 1 307 MSE n 1 308 LYS n 1 309 LYS n 1 310 ASP n 1 311 PHE n 1 312 ILE n 1 313 MSE n 1 314 HIS n 1 315 ARG n 1 316 LEU n 1 317 PRO n 1 318 PRO n 1 319 TYR n 1 320 SER n 1 321 ALA n 1 322 GLY n 1 323 ASP n 1 324 GLY n 1 325 ALA n 1 326 GLU n 1 327 LEU n 1 328 SER n 1 329 THR n 1 330 PRO n 1 331 GLY n 1 332 GLY n 1 333 LYS n 1 334 LEU n 1 335 PRO n 1 336 ARG n 1 337 LEU n 1 338 ASP n 1 339 SER n 1 340 VAL n 1 341 VAL n 1 342 ARG n 1 343 LEU n 1 344 GLN n 1 345 PHE n 1 346 LYS n 1 347 ASP n 1 348 HIS n 1 349 ILE n 1 350 VAL n 1 351 LEU n 1 352 THR n 1 353 VAL n 1 354 LEU n 1 355 PRO n 1 356 ASP n 1 357 GLN n 1 358 ASP n 1 359 GLN n 1 360 SER n 1 361 ASP n 1 362 GLU n 1 363 THR n 1 364 GLN n 1 365 GLU n 1 366 LYS n 1 367 MSE n 1 368 VAL n 1 369 TYR n 1 370 ILE n 1 371 TYR n 1 372 HIS n 1 373 SER n 1 374 LEU n 1 375 LYS n 1 376 ASN n 1 377 SER n 1 378 ARG n 1 379 GLU n 1 380 THR n 1 381 HIS n 1 382 MSE n 1 383 MSE n 1 384 GLY n 1 385 ASN n 1 386 GLU n 1 387 GLU n 1 388 GLU n 1 389 THR n 1 390 GLU n 1 391 PHE n 1 392 HIS n 1 393 GLY n 1 394 LEU n 1 395 ARG n 1 396 PHE n 1 397 PRO n 1 398 LEU n 1 399 SER n 1 400 HIS n 1 401 LEU n 1 402 ASP n 1 403 ALA n 1 404 LEU n 1 405 LYS n 1 406 GLN n 1 407 ILE n 1 408 TRP n 1 409 ASN n 1 410 SER n 1 411 PRO n 1 412 ALA n 1 413 ILE n 1 414 SER n 1 415 VAL n 1 416 LYS n 1 417 ASP n 1 418 LEU n 1 419 LYS n 1 420 LEU n 1 421 THR n 1 422 THR n 1 423 ASP n 1 424 GLU n 1 425 GLU n 1 426 LYS n 1 427 GLU n 1 428 SER n 1 429 LEU n 1 430 VAL n 1 431 LEU n 1 432 SER n 1 433 LEU n 1 434 TRP n 1 435 THR n 1 436 GLU n 1 437 CYS n 1 438 LEU n 1 439 ILE n 1 440 GLN n 1 441 VAL n 1 442 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant R3-PRARE2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector 'PNIC28 BSA4' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MINA_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q8IUF8 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4BU2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 442 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8IUF8 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 465 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 26 _struct_ref_seq.pdbx_auth_seq_align_end 465 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4BU2 SER A 1 ? UNP Q8IUF8 ? ? 'expression tag' 24 1 1 4BU2 MSE A 2 ? UNP Q8IUF8 ? ? 'expression tag' 25 2 1 4BU2 THR A 363 ? UNP Q8IUF8 ALA 386 'engineered mutation' 386 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AKG non-polymer . '2-OXOGLUTARIC ACID' ? 'C5 H6 O5' 146.098 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4BU2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.14 _exptl_crystal.density_percent_sol 76.1 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.1M BIS-TRIS PROPANE PH 6.5, 19-22% (W/V) PEG 3350, 0.2M AMMONIUM SULPHATE, 0.005M NICL2, TEMPERATURE 293K. VAPOR DIFFUSION, SITTING DROP ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2007-11-14 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9699 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength 0.9699 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4BU2 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 37.69 _reflns.d_resolution_high 2.78 _reflns.number_obs 27690 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.21 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.40 _reflns.B_iso_Wilson_estimate 55.2 _reflns.pdbx_redundancy 40.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.78 _reflns_shell.d_res_low 2.93 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 1.47 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.30 _reflns_shell.pdbx_redundancy 42.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4BU2 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27690 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 115409.78 _refine.pdbx_data_cutoff_low_absF 0.0 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.69 _refine.ls_d_res_high 2.78 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.228 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.228 _refine.ls_R_factor_R_free 0.233 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.4 _refine.ls_number_reflns_R_free 1496 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 57.1 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.34 _refine.solvent_model_param_bsol 51.0245 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4BU2 _refine_analyze.Luzzati_coordinate_error_obs 0.34 _refine_analyze.Luzzati_sigma_a_obs 0.46 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.38 _refine_analyze.Luzzati_sigma_a_free 0.47 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3012 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 3162 _refine_hist.d_res_high 2.78 _refine_hist.d_res_low 37.69 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.7 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.91 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.18 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.09 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.62 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.57 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details NONE _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_number ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 7 _refine_ls_shell.d_res_high 2.78 _refine_ls_shell.d_res_low 2.93 _refine_ls_shell.number_reflns_R_work 3970 _refine_ls_shell.R_factor_R_work 0.315 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free 0.346 _refine_ls_shell.R_factor_R_free_error 0.013 _refine_ls_shell.percent_reflns_R_free 4.8 _refine_ls_shell.number_reflns_R_free 191 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 AKG.PAR AKG.TOP 'X-RAY DIFFRACTION' 5 EDO.PAR EDO.TOP # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 4BU2 _struct.title '60S ribosomal protein L27A histidine hydroxylase (MINA53) in complex with Ni(II) and 2-oxoglutarate (2OG)' _struct.pdbx_descriptor 'BIFUNCTIONAL LYSINE-SPECIFIC DEMETHYLASE AND HISTIDYL-HYDROXYLASE MINA (E.C.1.14.11.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4BU2 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;OXIDOREDUCTASE, NON-HEME, IRON-BINDING, DSBH, 2-OXOGLUTARATE, DIOXYGENASE, JMJC DOMAIN, RIBOSOME BIOGENESIS, NUCLEAR PROTEIN, RPL27A, BETA-HYDROXYLATION, TRANSCRIPTION AND EPIGENETIC REGULATION, SIGNALING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 14 ? ILE A 23 ? SER A 37 ILE A 46 1 ? 10 HELX_P HELX_P2 2 LYS A 27 ? PHE A 35 ? LYS A 50 PHE A 58 1 ? 9 HELX_P HELX_P3 3 ASP A 47 ? PHE A 58 ? ASP A 70 PHE A 81 1 ? 12 HELX_P HELX_P4 4 LYS A 59 ? LEU A 66 ? LYS A 82 LEU A 89 1 ? 8 HELX_P HELX_P5 5 PRO A 117 ? PHE A 120 ? PRO A 140 PHE A 143 5 ? 4 HELX_P HELX_P6 6 LYS A 121 ? GLY A 136 ? LYS A 144 GLY A 159 1 ? 16 HELX_P HELX_P7 7 ALA A 190 ? GLY A 195 ? ALA A 213 GLY A 218 1 ? 6 HELX_P HELX_P8 8 SER A 240 ? LYS A 258 ? SER A 263 LYS A 281 1 ? 19 HELX_P HELX_P9 9 ASP A 260 ? THR A 265 ? ASP A 283 THR A 288 1 ? 6 HELX_P HELX_P10 10 GLN A 270 ? GLN A 274 ? GLN A 293 GLN A 297 5 ? 5 HELX_P HELX_P11 11 THR A 278 ? GLY A 298 ? THR A 301 GLY A 321 1 ? 21 HELX_P HELX_P12 12 ASP A 306 ? ARG A 315 ? ASP A 329 ARG A 338 1 ? 10 HELX_P HELX_P13 13 PHE A 345 ? ASP A 347 ? PHE A 368 ASP A 370 5 ? 3 HELX_P HELX_P14 14 SER A 377 ? HIS A 381 ? SER A 400 HIS A 404 5 ? 5 HELX_P HELX_P15 15 HIS A 400 ? SER A 410 ? HIS A 423 SER A 433 1 ? 11 HELX_P HELX_P16 16 LYS A 416 ? LEU A 418 ? LYS A 439 LEU A 441 5 ? 3 HELX_P HELX_P17 17 THR A 422 ? GLU A 436 ? THR A 445 GLU A 459 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 202 N ? ? ? 1_555 A PHE 201 C ? ? A MSE 225 A PHE 224 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 202 C ? ? ? 1_555 A LEU 203 N ? ? A MSE 225 A LEU 226 1_555 ? ? ? ? ? ? ? 1.321 ? covale3 covale ? ? A MSE 307 N ? ? ? 1_555 A ASP 306 C ? ? A MSE 330 A ASP 329 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale ? ? A MSE 307 C ? ? ? 1_555 A LYS 308 N ? ? A MSE 330 A LYS 331 1_555 ? ? ? ? ? ? ? 1.330 ? covale5 covale ? ? A MSE 313 N ? ? ? 1_555 A ILE 312 C ? ? A MSE 336 A ILE 335 1_555 ? ? ? ? ? ? ? 1.321 ? covale6 covale ? ? A MSE 313 C ? ? ? 1_555 A HIS 314 N ? ? A MSE 336 A HIS 337 1_555 ? ? ? ? ? ? ? 1.335 ? covale7 covale ? ? A MSE 367 N ? ? ? 1_555 A LYS 366 C ? ? A MSE 390 A LYS 389 1_555 ? ? ? ? ? ? ? 1.330 ? covale8 covale ? ? A MSE 367 C ? ? ? 1_555 A VAL 368 N ? ? A MSE 390 A VAL 391 1_555 ? ? ? ? ? ? ? 1.334 ? covale9 covale ? ? A MSE 382 N ? ? ? 1_555 A HIS 381 C ? ? A MSE 405 A HIS 404 1_555 ? ? ? ? ? ? ? 1.324 ? covale10 covale ? ? A MSE 382 C ? ? ? 1_555 A MSE 383 N ? ? A MSE 405 A MSE 406 1_555 ? ? ? ? ? ? ? 1.324 ? covale11 covale ? ? A MSE 383 C ? ? ? 1_555 A GLY 384 N ? ? A MSE 406 A GLY 407 1_555 ? ? ? ? ? ? ? 1.333 ? metalc1 metalc ? ? B NI . NI ? ? ? 1_555 A ASP 158 OD2 ? ? A NI 601 A ASP 181 1_555 ? ? ? ? ? ? ? 2.083 ? metalc2 metalc ? ? B NI . NI ? ? ? 1_555 A HIS 217 NE2 ? ? A NI 601 A HIS 240 1_555 ? ? ? ? ? ? ? 2.289 ? metalc3 metalc ? ? B NI . NI ? ? ? 1_555 A HIS 156 NE2 ? ? A NI 601 A HIS 179 1_555 ? ? ? ? ? ? ? 2.285 ? metalc4 metalc ? ? B NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 601 A HOH 2053 1_555 ? ? ? ? ? ? ? 2.246 ? metalc5 metalc ? ? C NI . NI ? ? ? 1_555 A HIS 172 ND1 ? ? A NI 602 A HIS 195 1_555 ? ? ? ? ? ? ? 2.357 ? metalc6 metalc ? ? C NI . NI ? ? ? 1_555 A GLU 200 OE2 ? ? A NI 602 A GLU 223 13_544 ? ? ? ? ? ? ? 2.118 ? metalc7 metalc ? ? C NI . NI ? ? ? 1_555 A ASP 220 OD1 ? ? A NI 602 A ASP 243 1_555 ? ? ? ? ? ? ? 2.099 ? metalc8 metalc ? ? C NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 602 A HOH 2122 1_555 ? ? ? ? ? ? ? 2.401 ? metalc9 metalc ? ? D AKG . O5 ? ? ? 1_555 B NI . NI ? ? A AKG 701 A NI 601 1_555 ? ? ? ? ? ? ? 2.142 ? metalc10 metalc ? ? D AKG . O2 ? ? ? 1_555 B NI . NI ? ? A AKG 701 A NI 601 1_555 ? ? ? ? ? ? ? 1.998 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 24 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 47 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 25 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 48 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.42 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 7 ? AB ? 2 ? AC ? 3 ? AD ? 3 ? AE ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AE 1 2 ? anti-parallel AE 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 41 ? ILE A 43 ? LEU A 64 ILE A 66 AA 2 LEU A 208 ? PHE A 211 ? LEU A 231 PHE A 234 AA 3 GLU A 161 ? GLU A 168 ? GLU A 184 GLU A 191 AA 4 SER A 228 ? THR A 235 ? SER A 251 THR A 258 AA 5 GLY A 140 ? THR A 146 ? GLY A 163 THR A 169 AA 6 THR A 111 ? HIS A 115 ? THR A 134 HIS A 138 AA 7 VAL A 79 ? CYS A 80 ? VAL A 102 CYS A 103 AB 1 HIS A 156 ? TYR A 157 ? HIS A 179 TYR A 180 AB 2 SER A 187 ? VAL A 188 ? SER A 210 VAL A 211 AC 1 HIS A 199 ? LEU A 203 ? HIS A 222 LEU A 226 AC 2 LYS A 171 ? TYR A 176 ? LYS A 194 TYR A 199 AC 3 ILE A 216 ? ASP A 220 ? ILE A 239 ASP A 243 AD 1 ILE A 413 ? SER A 414 ? ILE A 436 SER A 437 AD 2 VAL A 340 ? LEU A 343 ? VAL A 363 LEU A 366 AD 3 ILE A 439 ? VAL A 441 ? ILE A 462 VAL A 464 AE 1 ILE A 349 ? LEU A 354 ? ILE A 372 LEU A 377 AE 2 MSE A 367 ? HIS A 372 ? MSE A 390 HIS A 395 AE 3 GLY A 393 ? PRO A 397 ? GLY A 416 PRO A 420 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 43 ? N ILE A 66 O LEU A 208 ? O LEU A 231 AA 2 3 N PHE A 211 ? N PHE A 234 O VAL A 162 ? O VAL A 185 AA 3 4 N LEU A 167 ? N LEU A 190 O THR A 229 ? O THR A 252 AA 4 5 N SER A 234 ? N SER A 257 O GLY A 140 ? O GLY A 163 AA 5 6 N ILE A 145 ? N ILE A 168 O ILE A 112 ? O ILE A 135 AA 6 7 N THR A 111 ? N THR A 134 O CYS A 80 ? O CYS A 103 AB 1 2 N TYR A 157 ? N TYR A 180 O SER A 187 ? O SER A 210 AC 1 2 N LEU A 203 ? N LEU A 226 O LYS A 171 ? O LYS A 194 AC 2 3 N TYR A 176 ? N TYR A 199 O ILE A 216 ? O ILE A 239 AD 1 2 N ILE A 413 ? N ILE A 436 O VAL A 341 ? O VAL A 364 AD 2 3 N ARG A 342 ? N ARG A 365 O GLN A 440 ? O GLN A 463 AE 1 2 N LEU A 354 ? N LEU A 377 O MSE A 367 ? O MSE A 390 AE 2 3 N ILE A 370 ? N ILE A 393 O LEU A 394 ? O LEU A 417 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE NI A 601' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NI A 602' AC3 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE AKG A 701' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 901' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 902' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE EDO A 903' AC7 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 904' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 156 ? HIS A 179 . ? 1_555 ? 2 AC1 5 ASP A 158 ? ASP A 181 . ? 1_555 ? 3 AC1 5 HIS A 217 ? HIS A 240 . ? 1_555 ? 4 AC1 5 AKG D . ? AKG A 701 . ? 1_555 ? 5 AC1 5 HOH I . ? HOH A 2053 . ? 1_555 ? 6 AC2 4 HIS A 172 ? HIS A 195 . ? 1_555 ? 7 AC2 4 GLU A 200 ? GLU A 223 . ? 13_544 ? 8 AC2 4 ASP A 220 ? ASP A 243 . ? 1_555 ? 9 AC2 4 HOH I . ? HOH A 2122 . ? 1_555 ? 10 AC3 13 TYR A 144 ? TYR A 167 . ? 1_555 ? 11 AC3 13 GLY A 152 ? GLY A 175 . ? 1_555 ? 12 AC3 13 LEU A 153 ? LEU A 176 . ? 1_555 ? 13 AC3 13 HIS A 156 ? HIS A 179 . ? 1_555 ? 14 AC3 13 ASP A 158 ? ASP A 181 . ? 1_555 ? 15 AC3 13 LYS A 171 ? LYS A 194 . ? 1_555 ? 16 AC3 13 HIS A 217 ? HIS A 240 . ? 1_555 ? 17 AC3 13 HIS A 230 ? HIS A 253 . ? 1_555 ? 18 AC3 13 THR A 232 ? THR A 255 . ? 1_555 ? 19 AC3 13 NI B . ? NI A 601 . ? 1_555 ? 20 AC3 13 HOH I . ? HOH A 2053 . ? 1_555 ? 21 AC3 13 HOH I . ? HOH A 2054 . ? 1_555 ? 22 AC3 13 HOH I . ? HOH A 2056 . ? 1_555 ? 23 AC4 3 GLU A 129 ? GLU A 152 . ? 1_555 ? 24 AC4 3 LYS A 130 ? LYS A 153 . ? 1_555 ? 25 AC4 3 HOH I . ? HOH A 2045 . ? 1_555 ? 26 AC5 5 ASN A 142 ? ASN A 165 . ? 1_555 ? 27 AC5 5 TYR A 144 ? TYR A 167 . ? 1_555 ? 28 AC5 5 ASP A 158 ? ASP A 181 . ? 1_555 ? 29 AC5 5 THR A 232 ? THR A 255 . ? 1_555 ? 30 AC5 5 HOH I . ? HOH A 2050 . ? 1_555 ? 31 AC6 2 LYS A 121 ? LYS A 144 . ? 1_555 ? 32 AC6 2 ASP A 122 ? ASP A 145 . ? 1_555 ? 33 AC7 3 SER A 137 ? SER A 160 . ? 1_555 ? 34 AC7 3 LEU A 138 ? LEU A 161 . ? 1_555 ? 35 AC7 3 MSE A 307 ? MSE A 330 . ? 1_555 ? # _database_PDB_matrix.entry_id 4BU2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4BU2 _atom_sites.fract_transf_matrix[1][1] 0.005416 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005416 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005416 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 24 ? ? ? A . n A 1 2 MSE 2 25 ? ? ? A . n A 1 3 ALA 3 26 ? ? ? A . n A 1 4 ALA 4 27 ? ? ? A . n A 1 5 GLY 5 28 ? ? ? A . n A 1 6 GLY 6 29 ? ? ? A . n A 1 7 PRO 7 30 30 PRO PRO A . n A 1 8 SER 8 31 31 SER SER A . n A 1 9 ALA 9 32 32 ALA ALA A . n A 1 10 LEU 10 33 33 LEU LEU A . n A 1 11 ASN 11 34 34 ASN ASN A . n A 1 12 PHE 12 35 35 PHE PHE A . n A 1 13 ASP 13 36 36 ASP ASP A . n A 1 14 SER 14 37 37 SER SER A . n A 1 15 PRO 15 38 38 PRO PRO A . n A 1 16 SER 16 39 39 SER SER A . n A 1 17 SER 17 40 40 SER SER A . n A 1 18 LEU 18 41 41 LEU LEU A . n A 1 19 PHE 19 42 42 PHE PHE A . n A 1 20 GLU 20 43 43 GLU GLU A . n A 1 21 SER 21 44 44 SER SER A . n A 1 22 LEU 22 45 45 LEU LEU A . n A 1 23 ILE 23 46 46 ILE ILE A . n A 1 24 SER 24 47 47 SER SER A . n A 1 25 PRO 25 48 48 PRO PRO A . n A 1 26 ILE 26 49 49 ILE ILE A . n A 1 27 LYS 27 50 50 LYS LYS A . n A 1 28 THR 28 51 51 THR THR A . n A 1 29 GLU 29 52 52 GLU GLU A . n A 1 30 THR 30 53 53 THR THR A . n A 1 31 PHE 31 54 54 PHE PHE A . n A 1 32 PHE 32 55 55 PHE PHE A . n A 1 33 LYS 33 56 56 LYS LYS A . n A 1 34 GLU 34 57 57 GLU GLU A . n A 1 35 PHE 35 58 58 PHE PHE A . n A 1 36 TRP 36 59 59 TRP TRP A . n A 1 37 GLU 37 60 60 GLU GLU A . n A 1 38 GLN 38 61 61 GLN GLN A . n A 1 39 LYS 39 62 62 LYS LYS A . n A 1 40 PRO 40 63 63 PRO PRO A . n A 1 41 LEU 41 64 64 LEU LEU A . n A 1 42 LEU 42 65 65 LEU LEU A . n A 1 43 ILE 43 66 66 ILE ILE A . n A 1 44 GLN 44 67 67 GLN GLN A . n A 1 45 ARG 45 68 68 ARG ARG A . n A 1 46 ASP 46 69 69 ASP ASP A . n A 1 47 ASP 47 70 70 ASP ASP A . n A 1 48 PRO 48 71 71 PRO PRO A . n A 1 49 ALA 49 72 72 ALA ALA A . n A 1 50 LEU 50 73 73 LEU LEU A . n A 1 51 ALA 51 74 74 ALA ALA A . n A 1 52 THR 52 75 75 THR THR A . n A 1 53 TYR 53 76 76 TYR TYR A . n A 1 54 TYR 54 77 77 TYR TYR A . n A 1 55 GLY 55 78 78 GLY GLY A . n A 1 56 SER 56 79 79 SER SER A . n A 1 57 LEU 57 80 80 LEU LEU A . n A 1 58 PHE 58 81 81 PHE PHE A . n A 1 59 LYS 59 82 82 LYS LYS A . n A 1 60 LEU 60 83 83 LEU LEU A . n A 1 61 THR 61 84 84 THR THR A . n A 1 62 ASP 62 85 85 ASP ASP A . n A 1 63 LEU 63 86 86 LEU LEU A . n A 1 64 LYS 64 87 87 LYS LYS A . n A 1 65 SER 65 88 88 SER SER A . n A 1 66 LEU 66 89 89 LEU LEU A . n A 1 67 CYS 67 90 90 CYS CYS A . n A 1 68 SER 68 91 ? ? ? A . n A 1 69 ARG 69 92 ? ? ? A . n A 1 70 GLY 70 93 ? ? ? A . n A 1 71 MSE 71 94 ? ? ? A . n A 1 72 TYR 72 95 ? ? ? A . n A 1 73 TYR 73 96 ? ? ? A . n A 1 74 GLY 74 97 ? ? ? A . n A 1 75 ARG 75 98 98 ARG ARG A . n A 1 76 ASP 76 99 99 ASP ASP A . n A 1 77 VAL 77 100 100 VAL VAL A . n A 1 78 ASN 78 101 101 ASN ASN A . n A 1 79 VAL 79 102 102 VAL VAL A . n A 1 80 CYS 80 103 103 CYS CYS A . n A 1 81 ARG 81 104 104 ARG ARG A . n A 1 82 CYS 82 105 ? ? ? A . n A 1 83 VAL 83 106 ? ? ? A . n A 1 84 ASN 84 107 ? ? ? A . n A 1 85 GLY 85 108 ? ? ? A . n A 1 86 LYS 86 109 ? ? ? A . n A 1 87 LYS 87 110 ? ? ? A . n A 1 88 LYS 88 111 ? ? ? A . n A 1 89 VAL 89 112 ? ? ? A . n A 1 90 LEU 90 113 ? ? ? A . n A 1 91 ASN 91 114 ? ? ? A . n A 1 92 LYS 92 115 ? ? ? A . n A 1 93 ASP 93 116 ? ? ? A . n A 1 94 GLY 94 117 ? ? ? A . n A 1 95 LYS 95 118 ? ? ? A . n A 1 96 ALA 96 119 ? ? ? A . n A 1 97 HIS 97 120 ? ? ? A . n A 1 98 PHE 98 121 ? ? ? A . n A 1 99 LEU 99 122 ? ? ? A . n A 1 100 GLN 100 123 ? ? ? A . n A 1 101 LEU 101 124 ? ? ? A . n A 1 102 ARG 102 125 ? ? ? A . n A 1 103 LYS 103 126 ? ? ? A . n A 1 104 ASP 104 127 ? ? ? A . n A 1 105 PHE 105 128 ? ? ? A . n A 1 106 ASP 106 129 ? ? ? A . n A 1 107 GLN 107 130 ? ? ? A . n A 1 108 LYS 108 131 ? ? ? A . n A 1 109 ARG 109 132 ? ? ? A . n A 1 110 ALA 110 133 133 ALA ALA A . n A 1 111 THR 111 134 134 THR THR A . n A 1 112 ILE 112 135 135 ILE ILE A . n A 1 113 GLN 113 136 136 GLN GLN A . n A 1 114 PHE 114 137 137 PHE PHE A . n A 1 115 HIS 115 138 138 HIS HIS A . n A 1 116 GLN 116 139 139 GLN GLN A . n A 1 117 PRO 117 140 140 PRO PRO A . n A 1 118 GLN 118 141 141 GLN GLN A . n A 1 119 ARG 119 142 142 ARG ARG A . n A 1 120 PHE 120 143 143 PHE PHE A . n A 1 121 LYS 121 144 144 LYS LYS A . n A 1 122 ASP 122 145 145 ASP ASP A . n A 1 123 GLU 123 146 146 GLU GLU A . n A 1 124 LEU 124 147 147 LEU LEU A . n A 1 125 TRP 125 148 148 TRP TRP A . n A 1 126 ARG 126 149 149 ARG ARG A . n A 1 127 ILE 127 150 150 ILE ILE A . n A 1 128 GLN 128 151 151 GLN GLN A . n A 1 129 GLU 129 152 152 GLU GLU A . n A 1 130 LYS 130 153 153 LYS LYS A . n A 1 131 LEU 131 154 154 LEU LEU A . n A 1 132 GLU 132 155 155 GLU GLU A . n A 1 133 CYS 133 156 156 CYS CYS A . n A 1 134 TYR 134 157 157 TYR TYR A . n A 1 135 PHE 135 158 158 PHE PHE A . n A 1 136 GLY 136 159 159 GLY GLY A . n A 1 137 SER 137 160 160 SER SER A . n A 1 138 LEU 138 161 161 LEU LEU A . n A 1 139 VAL 139 162 162 VAL VAL A . n A 1 140 GLY 140 163 163 GLY GLY A . n A 1 141 SER 141 164 164 SER SER A . n A 1 142 ASN 142 165 165 ASN ASN A . n A 1 143 VAL 143 166 166 VAL VAL A . n A 1 144 TYR 144 167 167 TYR TYR A . n A 1 145 ILE 145 168 168 ILE ILE A . n A 1 146 THR 146 169 169 THR THR A . n A 1 147 PRO 147 170 170 PRO PRO A . n A 1 148 ALA 148 171 171 ALA ALA A . n A 1 149 GLY 149 172 172 GLY GLY A . n A 1 150 SER 150 173 173 SER SER A . n A 1 151 GLN 151 174 174 GLN GLN A . n A 1 152 GLY 152 175 175 GLY GLY A . n A 1 153 LEU 153 176 176 LEU LEU A . n A 1 154 PRO 154 177 177 PRO PRO A . n A 1 155 PRO 155 178 178 PRO PRO A . n A 1 156 HIS 156 179 179 HIS HIS A . n A 1 157 TYR 157 180 180 TYR TYR A . n A 1 158 ASP 158 181 181 ASP ASP A . n A 1 159 ASP 159 182 182 ASP ASP A . n A 1 160 VAL 160 183 183 VAL VAL A . n A 1 161 GLU 161 184 184 GLU GLU A . n A 1 162 VAL 162 185 185 VAL VAL A . n A 1 163 PHE 163 186 186 PHE PHE A . n A 1 164 ILE 164 187 187 ILE ILE A . n A 1 165 LEU 165 188 188 LEU LEU A . n A 1 166 GLN 166 189 189 GLN GLN A . n A 1 167 LEU 167 190 190 LEU LEU A . n A 1 168 GLU 168 191 191 GLU GLU A . n A 1 169 GLY 169 192 192 GLY GLY A . n A 1 170 GLU 170 193 193 GLU GLU A . n A 1 171 LYS 171 194 194 LYS LYS A . n A 1 172 HIS 172 195 195 HIS HIS A . n A 1 173 TRP 173 196 196 TRP TRP A . n A 1 174 ARG 174 197 197 ARG ARG A . n A 1 175 LEU 175 198 198 LEU LEU A . n A 1 176 TYR 176 199 199 TYR TYR A . n A 1 177 HIS 177 200 200 HIS HIS A . n A 1 178 PRO 178 201 201 PRO PRO A . n A 1 179 THR 179 202 202 THR THR A . n A 1 180 VAL 180 203 203 VAL VAL A . n A 1 181 PRO 181 204 204 PRO PRO A . n A 1 182 LEU 182 205 205 LEU LEU A . n A 1 183 ALA 183 206 206 ALA ALA A . n A 1 184 ARG 184 207 207 ARG ARG A . n A 1 185 GLU 185 208 208 GLU GLU A . n A 1 186 TYR 186 209 209 TYR TYR A . n A 1 187 SER 187 210 210 SER SER A . n A 1 188 VAL 188 211 211 VAL VAL A . n A 1 189 GLU 189 212 212 GLU GLU A . n A 1 190 ALA 190 213 213 ALA ALA A . n A 1 191 GLU 191 214 214 GLU GLU A . n A 1 192 GLU 192 215 215 GLU GLU A . n A 1 193 ARG 193 216 216 ARG ARG A . n A 1 194 ILE 194 217 217 ILE ILE A . n A 1 195 GLY 195 218 218 GLY GLY A . n A 1 196 ARG 196 219 219 ARG ARG A . n A 1 197 PRO 197 220 220 PRO PRO A . n A 1 198 VAL 198 221 221 VAL VAL A . n A 1 199 HIS 199 222 222 HIS HIS A . n A 1 200 GLU 200 223 223 GLU GLU A . n A 1 201 PHE 201 224 224 PHE PHE A . n A 1 202 MSE 202 225 225 MSE MSE A . n A 1 203 LEU 203 226 226 LEU LEU A . n A 1 204 LYS 204 227 227 LYS LYS A . n A 1 205 PRO 205 228 228 PRO PRO A . n A 1 206 GLY 206 229 229 GLY GLY A . n A 1 207 ASP 207 230 230 ASP ASP A . n A 1 208 LEU 208 231 231 LEU LEU A . n A 1 209 LEU 209 232 232 LEU LEU A . n A 1 210 TYR 210 233 233 TYR TYR A . n A 1 211 PHE 211 234 234 PHE PHE A . n A 1 212 PRO 212 235 235 PRO PRO A . n A 1 213 ARG 213 236 236 ARG ARG A . n A 1 214 GLY 214 237 237 GLY GLY A . n A 1 215 THR 215 238 238 THR THR A . n A 1 216 ILE 216 239 239 ILE ILE A . n A 1 217 HIS 217 240 240 HIS HIS A . n A 1 218 GLN 218 241 241 GLN GLN A . n A 1 219 ALA 219 242 242 ALA ALA A . n A 1 220 ASP 220 243 243 ASP ASP A . n A 1 221 THR 221 244 244 THR THR A . n A 1 222 PRO 222 245 245 PRO PRO A . n A 1 223 ALA 223 246 246 ALA ALA A . n A 1 224 GLY 224 247 247 GLY GLY A . n A 1 225 LEU 225 248 248 LEU LEU A . n A 1 226 ALA 226 249 249 ALA ALA A . n A 1 227 HIS 227 250 250 HIS HIS A . n A 1 228 SER 228 251 251 SER SER A . n A 1 229 THR 229 252 252 THR THR A . n A 1 230 HIS 230 253 253 HIS HIS A . n A 1 231 VAL 231 254 254 VAL VAL A . n A 1 232 THR 232 255 255 THR THR A . n A 1 233 ILE 233 256 256 ILE ILE A . n A 1 234 SER 234 257 257 SER SER A . n A 1 235 THR 235 258 258 THR THR A . n A 1 236 TYR 236 259 259 TYR TYR A . n A 1 237 GLN 237 260 260 GLN GLN A . n A 1 238 ASN 238 261 261 ASN ASN A . n A 1 239 ASN 239 262 262 ASN ASN A . n A 1 240 SER 240 263 263 SER SER A . n A 1 241 TRP 241 264 264 TRP TRP A . n A 1 242 GLY 242 265 265 GLY GLY A . n A 1 243 ASP 243 266 266 ASP ASP A . n A 1 244 PHE 244 267 267 PHE PHE A . n A 1 245 LEU 245 268 268 LEU LEU A . n A 1 246 LEU 246 269 269 LEU LEU A . n A 1 247 ASP 247 270 270 ASP ASP A . n A 1 248 THR 248 271 271 THR THR A . n A 1 249 ILE 249 272 272 ILE ILE A . n A 1 250 SER 250 273 273 SER SER A . n A 1 251 GLY 251 274 274 GLY GLY A . n A 1 252 LEU 252 275 275 LEU LEU A . n A 1 253 VAL 253 276 276 VAL VAL A . n A 1 254 PHE 254 277 277 PHE PHE A . n A 1 255 ASP 255 278 278 ASP ASP A . n A 1 256 THR 256 279 279 THR THR A . n A 1 257 ALA 257 280 280 ALA ALA A . n A 1 258 LYS 258 281 281 LYS LYS A . n A 1 259 GLU 259 282 282 GLU GLU A . n A 1 260 ASP 260 283 283 ASP ASP A . n A 1 261 VAL 261 284 284 VAL VAL A . n A 1 262 GLU 262 285 285 GLU GLU A . n A 1 263 LEU 263 286 286 LEU LEU A . n A 1 264 ARG 264 287 287 ARG ARG A . n A 1 265 THR 265 288 288 THR THR A . n A 1 266 GLY 266 289 289 GLY GLY A . n A 1 267 ILE 267 290 290 ILE ILE A . n A 1 268 PRO 268 291 291 PRO PRO A . n A 1 269 ARG 269 292 292 ARG ARG A . n A 1 270 GLN 270 293 293 GLN GLN A . n A 1 271 LEU 271 294 294 LEU LEU A . n A 1 272 LEU 272 295 295 LEU LEU A . n A 1 273 LEU 273 296 296 LEU LEU A . n A 1 274 GLN 274 297 297 GLN GLN A . n A 1 275 VAL 275 298 298 VAL VAL A . n A 1 276 GLU 276 299 299 GLU GLU A . n A 1 277 SER 277 300 300 SER SER A . n A 1 278 THR 278 301 301 THR THR A . n A 1 279 THR 279 302 302 THR THR A . n A 1 280 VAL 280 303 303 VAL VAL A . n A 1 281 ALA 281 304 304 ALA ALA A . n A 1 282 THR 282 305 305 THR THR A . n A 1 283 ARG 283 306 306 ARG ARG A . n A 1 284 ARG 284 307 307 ARG ARG A . n A 1 285 LEU 285 308 308 LEU LEU A . n A 1 286 SER 286 309 309 SER SER A . n A 1 287 GLY 287 310 310 GLY GLY A . n A 1 288 PHE 288 311 311 PHE PHE A . n A 1 289 LEU 289 312 312 LEU LEU A . n A 1 290 ARG 290 313 313 ARG ARG A . n A 1 291 THR 291 314 314 THR THR A . n A 1 292 LEU 292 315 315 LEU LEU A . n A 1 293 ALA 293 316 316 ALA ALA A . n A 1 294 ASP 294 317 317 ASP ASP A . n A 1 295 ARG 295 318 318 ARG ARG A . n A 1 296 LEU 296 319 319 LEU LEU A . n A 1 297 GLU 297 320 320 GLU GLU A . n A 1 298 GLY 298 321 321 GLY GLY A . n A 1 299 THR 299 322 322 THR THR A . n A 1 300 LYS 300 323 323 LYS LYS A . n A 1 301 GLU 301 324 324 GLU GLU A . n A 1 302 LEU 302 325 325 LEU LEU A . n A 1 303 LEU 303 326 326 LEU LEU A . n A 1 304 SER 304 327 327 SER SER A . n A 1 305 SER 305 328 328 SER SER A . n A 1 306 ASP 306 329 329 ASP ASP A . n A 1 307 MSE 307 330 330 MSE MSE A . n A 1 308 LYS 308 331 331 LYS LYS A . n A 1 309 LYS 309 332 332 LYS LYS A . n A 1 310 ASP 310 333 333 ASP ASP A . n A 1 311 PHE 311 334 334 PHE PHE A . n A 1 312 ILE 312 335 335 ILE ILE A . n A 1 313 MSE 313 336 336 MSE MSE A . n A 1 314 HIS 314 337 337 HIS HIS A . n A 1 315 ARG 315 338 338 ARG ARG A . n A 1 316 LEU 316 339 339 LEU LEU A . n A 1 317 PRO 317 340 340 PRO PRO A . n A 1 318 PRO 318 341 341 PRO PRO A . n A 1 319 TYR 319 342 342 TYR TYR A . n A 1 320 SER 320 343 343 SER SER A . n A 1 321 ALA 321 344 344 ALA ALA A . n A 1 322 GLY 322 345 ? ? ? A . n A 1 323 ASP 323 346 ? ? ? A . n A 1 324 GLY 324 347 ? ? ? A . n A 1 325 ALA 325 348 ? ? ? A . n A 1 326 GLU 326 349 ? ? ? A . n A 1 327 LEU 327 350 ? ? ? A . n A 1 328 SER 328 351 ? ? ? A . n A 1 329 THR 329 352 ? ? ? A . n A 1 330 PRO 330 353 ? ? ? A . n A 1 331 GLY 331 354 ? ? ? A . n A 1 332 GLY 332 355 ? ? ? A . n A 1 333 LYS 333 356 356 LYS LYS A . n A 1 334 LEU 334 357 357 LEU LEU A . n A 1 335 PRO 335 358 358 PRO PRO A . n A 1 336 ARG 336 359 359 ARG ARG A . n A 1 337 LEU 337 360 360 LEU LEU A . n A 1 338 ASP 338 361 361 ASP ASP A . n A 1 339 SER 339 362 362 SER SER A . n A 1 340 VAL 340 363 363 VAL VAL A . n A 1 341 VAL 341 364 364 VAL VAL A . n A 1 342 ARG 342 365 365 ARG ARG A . n A 1 343 LEU 343 366 366 LEU LEU A . n A 1 344 GLN 344 367 367 GLN GLN A . n A 1 345 PHE 345 368 368 PHE PHE A . n A 1 346 LYS 346 369 369 LYS LYS A . n A 1 347 ASP 347 370 370 ASP ASP A . n A 1 348 HIS 348 371 371 HIS HIS A . n A 1 349 ILE 349 372 372 ILE ILE A . n A 1 350 VAL 350 373 373 VAL VAL A . n A 1 351 LEU 351 374 374 LEU LEU A . n A 1 352 THR 352 375 375 THR THR A . n A 1 353 VAL 353 376 376 VAL VAL A . n A 1 354 LEU 354 377 377 LEU LEU A . n A 1 355 PRO 355 378 378 PRO PRO A . n A 1 356 ASP 356 379 379 ASP ASP A . n A 1 357 GLN 357 380 380 GLN GLN A . n A 1 358 ASP 358 381 ? ? ? A . n A 1 359 GLN 359 382 ? ? ? A . n A 1 360 SER 360 383 ? ? ? A . n A 1 361 ASP 361 384 ? ? ? A . n A 1 362 GLU 362 385 ? ? ? A . n A 1 363 THR 363 386 ? ? ? A . n A 1 364 GLN 364 387 ? ? ? A . n A 1 365 GLU 365 388 388 GLU GLU A . n A 1 366 LYS 366 389 389 LYS LYS A . n A 1 367 MSE 367 390 390 MSE MSE A . n A 1 368 VAL 368 391 391 VAL VAL A . n A 1 369 TYR 369 392 392 TYR TYR A . n A 1 370 ILE 370 393 393 ILE ILE A . n A 1 371 TYR 371 394 394 TYR TYR A . n A 1 372 HIS 372 395 395 HIS HIS A . n A 1 373 SER 373 396 396 SER SER A . n A 1 374 LEU 374 397 397 LEU LEU A . n A 1 375 LYS 375 398 398 LYS LYS A . n A 1 376 ASN 376 399 399 ASN ASN A . n A 1 377 SER 377 400 400 SER SER A . n A 1 378 ARG 378 401 401 ARG ARG A . n A 1 379 GLU 379 402 402 GLU GLU A . n A 1 380 THR 380 403 403 THR THR A . n A 1 381 HIS 381 404 404 HIS HIS A . n A 1 382 MSE 382 405 405 MSE MSE A . n A 1 383 MSE 383 406 406 MSE MSE A . n A 1 384 GLY 384 407 407 GLY GLY A . n A 1 385 ASN 385 408 408 ASN ASN A . n A 1 386 GLU 386 409 409 GLU GLU A . n A 1 387 GLU 387 410 ? ? ? A . n A 1 388 GLU 388 411 ? ? ? A . n A 1 389 THR 389 412 ? ? ? A . n A 1 390 GLU 390 413 ? ? ? A . n A 1 391 PHE 391 414 414 PHE PHE A . n A 1 392 HIS 392 415 415 HIS HIS A . n A 1 393 GLY 393 416 416 GLY GLY A . n A 1 394 LEU 394 417 417 LEU LEU A . n A 1 395 ARG 395 418 418 ARG ARG A . n A 1 396 PHE 396 419 419 PHE PHE A . n A 1 397 PRO 397 420 420 PRO PRO A . n A 1 398 LEU 398 421 421 LEU LEU A . n A 1 399 SER 399 422 422 SER SER A . n A 1 400 HIS 400 423 423 HIS HIS A . n A 1 401 LEU 401 424 424 LEU LEU A . n A 1 402 ASP 402 425 425 ASP ASP A . n A 1 403 ALA 403 426 426 ALA ALA A . n A 1 404 LEU 404 427 427 LEU LEU A . n A 1 405 LYS 405 428 428 LYS LYS A . n A 1 406 GLN 406 429 429 GLN GLN A . n A 1 407 ILE 407 430 430 ILE ILE A . n A 1 408 TRP 408 431 431 TRP TRP A . n A 1 409 ASN 409 432 432 ASN ASN A . n A 1 410 SER 410 433 433 SER SER A . n A 1 411 PRO 411 434 434 PRO PRO A . n A 1 412 ALA 412 435 435 ALA ALA A . n A 1 413 ILE 413 436 436 ILE ILE A . n A 1 414 SER 414 437 437 SER SER A . n A 1 415 VAL 415 438 438 VAL VAL A . n A 1 416 LYS 416 439 439 LYS LYS A . n A 1 417 ASP 417 440 440 ASP ASP A . n A 1 418 LEU 418 441 441 LEU LEU A . n A 1 419 LYS 419 442 442 LYS LYS A . n A 1 420 LEU 420 443 443 LEU LEU A . n A 1 421 THR 421 444 444 THR THR A . n A 1 422 THR 422 445 445 THR THR A . n A 1 423 ASP 423 446 446 ASP ASP A . n A 1 424 GLU 424 447 447 GLU GLU A . n A 1 425 GLU 425 448 448 GLU GLU A . n A 1 426 LYS 426 449 449 LYS LYS A . n A 1 427 GLU 427 450 450 GLU GLU A . n A 1 428 SER 428 451 451 SER SER A . n A 1 429 LEU 429 452 452 LEU LEU A . n A 1 430 VAL 430 453 453 VAL VAL A . n A 1 431 LEU 431 454 454 LEU LEU A . n A 1 432 SER 432 455 455 SER SER A . n A 1 433 LEU 433 456 456 LEU LEU A . n A 1 434 TRP 434 457 457 TRP TRP A . n A 1 435 THR 435 458 458 THR THR A . n A 1 436 GLU 436 459 459 GLU GLU A . n A 1 437 CYS 437 460 460 CYS CYS A . n A 1 438 LEU 438 461 461 LEU LEU A . n A 1 439 ILE 439 462 462 ILE ILE A . n A 1 440 GLN 440 463 463 GLN GLN A . n A 1 441 VAL 441 464 464 VAL VAL A . n A 1 442 VAL 442 465 465 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI 1 601 601 NI NI A . C 2 NI 1 602 602 NI NI A . D 3 AKG 1 701 701 AKG AKG A . E 4 EDO 1 901 901 EDO EDO A . F 4 EDO 1 902 902 EDO EDO A . G 4 EDO 1 903 903 EDO EDO A . H 4 EDO 1 904 904 EDO EDO A . I 5 HOH 1 2001 2001 HOH HOH A . I 5 HOH 2 2002 2002 HOH HOH A . I 5 HOH 3 2003 2003 HOH HOH A . I 5 HOH 4 2004 2004 HOH HOH A . I 5 HOH 5 2005 2005 HOH HOH A . I 5 HOH 6 2006 2006 HOH HOH A . I 5 HOH 7 2007 2007 HOH HOH A . I 5 HOH 8 2008 2008 HOH HOH A . I 5 HOH 9 2009 2009 HOH HOH A . I 5 HOH 10 2010 2010 HOH HOH A . I 5 HOH 11 2011 2011 HOH HOH A . I 5 HOH 12 2012 2012 HOH HOH A . I 5 HOH 13 2013 2013 HOH HOH A . I 5 HOH 14 2014 2014 HOH HOH A . I 5 HOH 15 2015 2015 HOH HOH A . I 5 HOH 16 2016 2016 HOH HOH A . I 5 HOH 17 2017 2017 HOH HOH A . I 5 HOH 18 2018 2018 HOH HOH A . I 5 HOH 19 2019 2019 HOH HOH A . I 5 HOH 20 2020 2020 HOH HOH A . I 5 HOH 21 2021 2021 HOH HOH A . I 5 HOH 22 2022 2022 HOH HOH A . I 5 HOH 23 2023 2023 HOH HOH A . I 5 HOH 24 2024 2024 HOH HOH A . I 5 HOH 25 2025 2025 HOH HOH A . I 5 HOH 26 2026 2026 HOH HOH A . I 5 HOH 27 2027 2027 HOH HOH A . I 5 HOH 28 2028 2028 HOH HOH A . I 5 HOH 29 2029 2029 HOH HOH A . I 5 HOH 30 2030 2030 HOH HOH A . I 5 HOH 31 2031 2031 HOH HOH A . I 5 HOH 32 2032 2032 HOH HOH A . I 5 HOH 33 2033 2033 HOH HOH A . I 5 HOH 34 2034 2034 HOH HOH A . I 5 HOH 35 2035 2035 HOH HOH A . I 5 HOH 36 2036 2036 HOH HOH A . I 5 HOH 37 2037 2037 HOH HOH A . I 5 HOH 38 2038 2038 HOH HOH A . I 5 HOH 39 2039 2039 HOH HOH A . I 5 HOH 40 2040 2040 HOH HOH A . I 5 HOH 41 2041 2041 HOH HOH A . I 5 HOH 42 2042 2042 HOH HOH A . I 5 HOH 43 2043 2043 HOH HOH A . I 5 HOH 44 2044 2044 HOH HOH A . I 5 HOH 45 2045 2045 HOH HOH A . I 5 HOH 46 2046 2046 HOH HOH A . I 5 HOH 47 2047 2047 HOH HOH A . I 5 HOH 48 2048 2048 HOH HOH A . I 5 HOH 49 2049 2049 HOH HOH A . I 5 HOH 50 2050 2050 HOH HOH A . I 5 HOH 51 2051 2051 HOH HOH A . I 5 HOH 52 2052 2052 HOH HOH A . I 5 HOH 53 2053 2053 HOH HOH A . I 5 HOH 54 2054 2054 HOH HOH A . I 5 HOH 55 2055 2055 HOH HOH A . I 5 HOH 56 2056 2056 HOH HOH A . I 5 HOH 57 2057 2057 HOH HOH A . I 5 HOH 58 2058 2058 HOH HOH A . I 5 HOH 59 2059 2059 HOH HOH A . I 5 HOH 60 2060 2060 HOH HOH A . I 5 HOH 61 2061 2061 HOH HOH A . I 5 HOH 62 2062 2062 HOH HOH A . I 5 HOH 63 2063 2063 HOH HOH A . I 5 HOH 64 2064 2064 HOH HOH A . I 5 HOH 65 2065 2065 HOH HOH A . I 5 HOH 66 2066 2066 HOH HOH A . I 5 HOH 67 2067 2067 HOH HOH A . I 5 HOH 68 2068 2068 HOH HOH A . I 5 HOH 69 2069 2069 HOH HOH A . I 5 HOH 70 2070 2070 HOH HOH A . I 5 HOH 71 2071 2071 HOH HOH A . I 5 HOH 72 2072 2072 HOH HOH A . I 5 HOH 73 2073 2073 HOH HOH A . I 5 HOH 74 2074 2074 HOH HOH A . I 5 HOH 75 2075 2075 HOH HOH A . I 5 HOH 76 2076 2076 HOH HOH A . I 5 HOH 77 2077 2077 HOH HOH A . I 5 HOH 78 2078 2078 HOH HOH A . I 5 HOH 79 2079 2079 HOH HOH A . I 5 HOH 80 2080 2080 HOH HOH A . I 5 HOH 81 2081 2081 HOH HOH A . I 5 HOH 82 2082 2082 HOH HOH A . I 5 HOH 83 2083 2083 HOH HOH A . I 5 HOH 84 2084 2084 HOH HOH A . I 5 HOH 85 2085 2085 HOH HOH A . I 5 HOH 86 2086 2086 HOH HOH A . I 5 HOH 87 2087 2087 HOH HOH A . I 5 HOH 88 2088 2088 HOH HOH A . I 5 HOH 89 2089 2089 HOH HOH A . I 5 HOH 90 2090 2090 HOH HOH A . I 5 HOH 91 2091 2091 HOH HOH A . I 5 HOH 92 2092 2092 HOH HOH A . I 5 HOH 93 2093 2093 HOH HOH A . I 5 HOH 94 2094 2094 HOH HOH A . I 5 HOH 95 2095 2095 HOH HOH A . I 5 HOH 96 2096 2096 HOH HOH A . I 5 HOH 97 2097 2097 HOH HOH A . I 5 HOH 98 2098 2098 HOH HOH A . I 5 HOH 99 2099 2099 HOH HOH A . I 5 HOH 100 2100 2100 HOH HOH A . I 5 HOH 101 2101 2101 HOH HOH A . I 5 HOH 102 2102 2102 HOH HOH A . I 5 HOH 103 2103 2103 HOH HOH A . I 5 HOH 104 2104 2104 HOH HOH A . I 5 HOH 105 2105 2105 HOH HOH A . I 5 HOH 106 2106 2106 HOH HOH A . I 5 HOH 107 2107 2107 HOH HOH A . I 5 HOH 108 2108 2108 HOH HOH A . I 5 HOH 109 2109 2109 HOH HOH A . I 5 HOH 110 2110 2110 HOH HOH A . I 5 HOH 111 2111 2111 HOH HOH A . I 5 HOH 112 2112 2112 HOH HOH A . I 5 HOH 113 2113 2113 HOH HOH A . I 5 HOH 114 2114 2114 HOH HOH A . I 5 HOH 115 2115 2115 HOH HOH A . I 5 HOH 116 2116 2116 HOH HOH A . I 5 HOH 117 2117 2117 HOH HOH A . I 5 HOH 118 2118 2118 HOH HOH A . I 5 HOH 119 2119 2119 HOH HOH A . I 5 HOH 120 2120 2120 HOH HOH A . I 5 HOH 121 2121 2121 HOH HOH A . I 5 HOH 122 2122 2122 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 202 A MSE 225 ? MET SELENOMETHIONINE 2 A MSE 307 A MSE 330 ? MET SELENOMETHIONINE 3 A MSE 313 A MSE 336 ? MET SELENOMETHIONINE 4 A MSE 367 A MSE 390 ? MET SELENOMETHIONINE 5 A MSE 382 A MSE 405 ? MET SELENOMETHIONINE 6 A MSE 383 A MSE 406 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9790 ? 1 MORE -62.0 ? 1 'SSA (A^2)' 32920 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 14_555 -y+1/4,-x+1/4,-z+1/4 0.0000000000 -1.0000000000 0.0000000000 46.1580000000 -1.0000000000 0.0000000000 0.0000000000 46.1580000000 0.0000000000 0.0000000000 -1.0000000000 46.1580000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 158 ? A ASP 181 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 NE2 ? A HIS 217 ? A HIS 240 ? 1_555 94.2 ? 2 OD2 ? A ASP 158 ? A ASP 181 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 NE2 ? A HIS 156 ? A HIS 179 ? 1_555 110.3 ? 3 NE2 ? A HIS 217 ? A HIS 240 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 NE2 ? A HIS 156 ? A HIS 179 ? 1_555 83.3 ? 4 OD2 ? A ASP 158 ? A ASP 181 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O ? I HOH . ? A HOH 2053 ? 1_555 96.0 ? 5 NE2 ? A HIS 217 ? A HIS 240 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O ? I HOH . ? A HOH 2053 ? 1_555 167.9 ? 6 NE2 ? A HIS 156 ? A HIS 179 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O ? I HOH . ? A HOH 2053 ? 1_555 87.1 ? 7 OD2 ? A ASP 158 ? A ASP 181 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O5 ? D AKG . ? A AKG 701 ? 1_555 167.4 ? 8 NE2 ? A HIS 217 ? A HIS 240 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O5 ? D AKG . ? A AKG 701 ? 1_555 90.6 ? 9 NE2 ? A HIS 156 ? A HIS 179 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O5 ? D AKG . ? A AKG 701 ? 1_555 81.8 ? 10 O ? I HOH . ? A HOH 2053 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O5 ? D AKG . ? A AKG 701 ? 1_555 80.7 ? 11 OD2 ? A ASP 158 ? A ASP 181 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O2 ? D AKG . ? A AKG 701 ? 1_555 87.5 ? 12 NE2 ? A HIS 217 ? A HIS 240 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O2 ? D AKG . ? A AKG 701 ? 1_555 94.3 ? 13 NE2 ? A HIS 156 ? A HIS 179 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O2 ? D AKG . ? A AKG 701 ? 1_555 162.2 ? 14 O ? I HOH . ? A HOH 2053 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O2 ? D AKG . ? A AKG 701 ? 1_555 92.6 ? 15 O5 ? D AKG . ? A AKG 701 ? 1_555 NI ? B NI . ? A NI 601 ? 1_555 O2 ? D AKG . ? A AKG 701 ? 1_555 80.6 ? 16 ND1 ? A HIS 172 ? A HIS 195 ? 1_555 NI ? C NI . ? A NI 602 ? 1_555 OE2 ? A GLU 200 ? A GLU 223 ? 13_544 113.2 ? 17 ND1 ? A HIS 172 ? A HIS 195 ? 1_555 NI ? C NI . ? A NI 602 ? 1_555 OD1 ? A ASP 220 ? A ASP 243 ? 1_555 95.3 ? 18 OE2 ? A GLU 200 ? A GLU 223 ? 13_544 NI ? C NI . ? A NI 602 ? 1_555 OD1 ? A ASP 220 ? A ASP 243 ? 1_555 120.8 ? 19 ND1 ? A HIS 172 ? A HIS 195 ? 1_555 NI ? C NI . ? A NI 602 ? 1_555 O ? I HOH . ? A HOH 2122 ? 1_555 106.3 ? 20 OE2 ? A GLU 200 ? A GLU 223 ? 13_544 NI ? C NI . ? A NI 602 ? 1_555 O ? I HOH . ? A HOH 2122 ? 1_555 100.8 ? 21 OD1 ? A ASP 220 ? A ASP 243 ? 1_555 NI ? C NI . ? A NI 602 ? 1_555 O ? I HOH . ? A HOH 2122 ? 1_555 120.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-05-14 2 'Structure model' 1 1 2014-05-21 3 'Structure model' 1 2 2014-06-25 4 'Structure model' 1 3 2018-02-21 5 'Structure model' 1 4 2019-01-30 6 'Structure model' 1 5 2019-02-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Structure summary' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Experimental preparation' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Experimental preparation' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' citation 3 4 'Structure model' citation_author 4 5 'Structure model' exptl_crystal_grow 5 6 'Structure model' exptl_crystal_grow # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.name' 2 4 'Structure model' '_citation.journal_id_ISSN' 3 4 'Structure model' '_citation.page_last' 4 4 'Structure model' '_citation.pdbx_database_id_DOI' 5 4 'Structure model' '_citation.title' 6 4 'Structure model' '_citation_author.name' 7 5 'Structure model' '_exptl_crystal_grow.method' 8 6 'Structure model' '_exptl_crystal_grow.temp' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language CNS refinement 1.3 ? 1 ? ? ? ? MOSFLM 'data reduction' . ? 2 ? ? ? ? SCALA 'data scaling' . ? 3 ? ? ? ? SHELX phasing . ? 4 ? ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 2024 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2083 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 61 ? ? -127.98 -60.12 2 1 PHE A 81 ? ? -174.14 125.03 3 1 PHE A 143 ? ? -130.85 -31.29 4 1 ILE A 436 ? ? -178.73 147.70 5 1 ASP A 440 ? ? -58.43 -6.28 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2011 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.13 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 56 ? CD ? A LYS 33 CD 2 1 Y 1 A LYS 56 ? CE ? A LYS 33 CE 3 1 Y 1 A LYS 56 ? NZ ? A LYS 33 NZ 4 1 Y 1 A LYS 87 ? CG ? A LYS 64 CG 5 1 Y 1 A LYS 87 ? CD ? A LYS 64 CD 6 1 Y 1 A LYS 87 ? CE ? A LYS 64 CE 7 1 Y 1 A LYS 87 ? NZ ? A LYS 64 NZ 8 1 Y 1 A ARG 98 ? CG ? A ARG 75 CG 9 1 Y 1 A ARG 98 ? CD ? A ARG 75 CD 10 1 Y 1 A ARG 98 ? NE ? A ARG 75 NE 11 1 Y 1 A ARG 98 ? CZ ? A ARG 75 CZ 12 1 Y 1 A ARG 98 ? NH1 ? A ARG 75 NH1 13 1 Y 1 A ARG 98 ? NH2 ? A ARG 75 NH2 14 1 Y 1 A ARG 104 ? CG ? A ARG 81 CG 15 1 Y 1 A ARG 104 ? CD ? A ARG 81 CD 16 1 Y 1 A ARG 104 ? NE ? A ARG 81 NE 17 1 Y 1 A ARG 104 ? CZ ? A ARG 81 CZ 18 1 Y 1 A ARG 104 ? NH1 ? A ARG 81 NH1 19 1 Y 1 A ARG 104 ? NH2 ? A ARG 81 NH2 20 1 Y 1 A GLU 208 ? CG ? A GLU 185 CG 21 1 Y 1 A GLU 208 ? CD ? A GLU 185 CD 22 1 Y 1 A GLU 208 ? OE1 ? A GLU 185 OE1 23 1 Y 1 A GLU 208 ? OE2 ? A GLU 185 OE2 24 1 Y 1 A SER 300 ? OG ? A SER 277 OG 25 1 Y 1 A ARG 306 ? CG ? A ARG 283 CG 26 1 Y 1 A ARG 306 ? CD ? A ARG 283 CD 27 1 Y 1 A ARG 306 ? NE ? A ARG 283 NE 28 1 Y 1 A ARG 306 ? CZ ? A ARG 283 CZ 29 1 Y 1 A ARG 306 ? NH1 ? A ARG 283 NH1 30 1 Y 1 A ARG 306 ? NH2 ? A ARG 283 NH2 31 1 Y 1 A LYS 323 ? CG ? A LYS 300 CG 32 1 Y 1 A LYS 323 ? CD ? A LYS 300 CD 33 1 Y 1 A LYS 323 ? CE ? A LYS 300 CE 34 1 Y 1 A LYS 323 ? NZ ? A LYS 300 NZ 35 1 Y 1 A GLU 324 ? CG ? A GLU 301 CG 36 1 Y 1 A GLU 324 ? CD ? A GLU 301 CD 37 1 Y 1 A GLU 324 ? OE1 ? A GLU 301 OE1 38 1 Y 1 A GLU 324 ? OE2 ? A GLU 301 OE2 39 1 Y 1 A LYS 356 ? CG ? A LYS 333 CG 40 1 Y 1 A LYS 356 ? CD ? A LYS 333 CD 41 1 Y 1 A LYS 356 ? CE ? A LYS 333 CE 42 1 Y 1 A LYS 356 ? NZ ? A LYS 333 NZ 43 1 Y 1 A GLN 380 ? CG ? A GLN 357 CG 44 1 Y 1 A GLN 380 ? CD ? A GLN 357 CD 45 1 Y 1 A GLN 380 ? OE1 ? A GLN 357 OE1 46 1 Y 1 A GLN 380 ? NE2 ? A GLN 357 NE2 47 1 Y 1 A LYS 389 ? CG ? A LYS 366 CG 48 1 Y 1 A LYS 389 ? CD ? A LYS 366 CD 49 1 Y 1 A LYS 389 ? CE ? A LYS 366 CE 50 1 Y 1 A LYS 389 ? NZ ? A LYS 366 NZ 51 1 Y 1 A GLU 409 ? CG ? A GLU 386 CG 52 1 Y 1 A GLU 409 ? CD ? A GLU 386 CD 53 1 Y 1 A GLU 409 ? OE1 ? A GLU 386 OE1 54 1 Y 1 A GLU 409 ? OE2 ? A GLU 386 OE2 55 1 Y 1 A PHE 414 ? CG ? A PHE 391 CG 56 1 Y 1 A PHE 414 ? CD1 ? A PHE 391 CD1 57 1 Y 1 A PHE 414 ? CD2 ? A PHE 391 CD2 58 1 Y 1 A PHE 414 ? CE1 ? A PHE 391 CE1 59 1 Y 1 A PHE 414 ? CE2 ? A PHE 391 CE2 60 1 Y 1 A PHE 414 ? CZ ? A PHE 391 CZ 61 1 Y 1 A ARG 418 ? NE ? A ARG 395 NE 62 1 Y 1 A ARG 418 ? CZ ? A ARG 395 CZ 63 1 Y 1 A ARG 418 ? NH1 ? A ARG 395 NH1 64 1 Y 1 A ARG 418 ? NH2 ? A ARG 395 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 24 ? A SER 1 2 1 Y 1 A MSE 25 ? A MSE 2 3 1 Y 1 A ALA 26 ? A ALA 3 4 1 Y 1 A ALA 27 ? A ALA 4 5 1 Y 1 A GLY 28 ? A GLY 5 6 1 Y 1 A GLY 29 ? A GLY 6 7 1 Y 1 A SER 91 ? A SER 68 8 1 Y 1 A ARG 92 ? A ARG 69 9 1 Y 1 A GLY 93 ? A GLY 70 10 1 Y 1 A MSE 94 ? A MSE 71 11 1 Y 1 A TYR 95 ? A TYR 72 12 1 Y 1 A TYR 96 ? A TYR 73 13 1 Y 1 A GLY 97 ? A GLY 74 14 1 Y 1 A CYS 105 ? A CYS 82 15 1 Y 1 A VAL 106 ? A VAL 83 16 1 Y 1 A ASN 107 ? A ASN 84 17 1 Y 1 A GLY 108 ? A GLY 85 18 1 Y 1 A LYS 109 ? A LYS 86 19 1 Y 1 A LYS 110 ? A LYS 87 20 1 Y 1 A LYS 111 ? A LYS 88 21 1 Y 1 A VAL 112 ? A VAL 89 22 1 Y 1 A LEU 113 ? A LEU 90 23 1 Y 1 A ASN 114 ? A ASN 91 24 1 Y 1 A LYS 115 ? A LYS 92 25 1 Y 1 A ASP 116 ? A ASP 93 26 1 Y 1 A GLY 117 ? A GLY 94 27 1 Y 1 A LYS 118 ? A LYS 95 28 1 Y 1 A ALA 119 ? A ALA 96 29 1 Y 1 A HIS 120 ? A HIS 97 30 1 Y 1 A PHE 121 ? A PHE 98 31 1 Y 1 A LEU 122 ? A LEU 99 32 1 Y 1 A GLN 123 ? A GLN 100 33 1 Y 1 A LEU 124 ? A LEU 101 34 1 Y 1 A ARG 125 ? A ARG 102 35 1 Y 1 A LYS 126 ? A LYS 103 36 1 Y 1 A ASP 127 ? A ASP 104 37 1 Y 1 A PHE 128 ? A PHE 105 38 1 Y 1 A ASP 129 ? A ASP 106 39 1 Y 1 A GLN 130 ? A GLN 107 40 1 Y 1 A LYS 131 ? A LYS 108 41 1 Y 1 A ARG 132 ? A ARG 109 42 1 Y 1 A GLY 345 ? A GLY 322 43 1 Y 1 A ASP 346 ? A ASP 323 44 1 Y 1 A GLY 347 ? A GLY 324 45 1 Y 1 A ALA 348 ? A ALA 325 46 1 Y 1 A GLU 349 ? A GLU 326 47 1 Y 1 A LEU 350 ? A LEU 327 48 1 Y 1 A SER 351 ? A SER 328 49 1 Y 1 A THR 352 ? A THR 329 50 1 Y 1 A PRO 353 ? A PRO 330 51 1 Y 1 A GLY 354 ? A GLY 331 52 1 Y 1 A GLY 355 ? A GLY 332 53 1 Y 1 A ASP 381 ? A ASP 358 54 1 Y 1 A GLN 382 ? A GLN 359 55 1 Y 1 A SER 383 ? A SER 360 56 1 Y 1 A ASP 384 ? A ASP 361 57 1 Y 1 A GLU 385 ? A GLU 362 58 1 Y 1 A THR 386 ? A THR 363 59 1 Y 1 A GLN 387 ? A GLN 364 60 1 Y 1 A GLU 410 ? A GLU 387 61 1 Y 1 A GLU 411 ? A GLU 388 62 1 Y 1 A THR 412 ? A THR 389 63 1 Y 1 A GLU 413 ? A GLU 390 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 '2-OXOGLUTARIC ACID' AKG 4 1,2-ETHANEDIOL EDO 5 water HOH #