data_4BV5 # _entry.id 4BV5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4BV5 pdb_00004bv5 10.2210/pdb4bv5/pdb PDBE EBI-57357 ? ? WWPDB D_1290057357 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-09 2 'Structure model' 1 1 2018-04-04 3 'Structure model' 1 2 2023-12-20 4 'Structure model' 1 3 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 3 'Structure model' 'Refinement description' 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_source 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_database_status 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' struct_site 8 4 'Structure model' pdbx_entry_details 9 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_source.type' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_pdbx_database_status.status_code_sf' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 8 4 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4BV5 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-06-25 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4BV7 unspecified 'IDENTIFICATION OF SMALL MOLECULE INHIBITORS SELECTIVE FOR APO(A) KRINGLES KIV-7, KIV-10 AND KV.' PDB 4BVC unspecified 'IDENTIFICATION OF SMALL MOLECULE INHIBITORS SELECTIVE FOR APO(A) KRINGLES KIV-7, KIV-10 AND KV.' PDB 4BVD unspecified 'IDENTIFICATION OF SMALL MOLECULE INHIBITORS SELECTIVE FOR APO(A) KRINGLES KIV-7, KIV-10 AND KV.' PDB 4BVV unspecified 'IDENTIFICATION OF SMALL MOLECULE INHIBITORS SELECTIVE FOR APO(A) KRINGLES KIV-7, KIV-10 AND KV.' PDB 4BVW unspecified 'IDENTIFICATION OF SMALL MOLECULE INHIBITORS SELECTIVE FOR APO(A) KRINGLES KIV-7, KIV-10 AND KV.' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sandmark, J.' 1 'Althage, M.' 2 'Andersson, G.M.K.' 3 'Antonsson, T.' 4 'Blaho, S.' 5 'Bodin, C.' 6 'Bostrom, J.' 7 'Chen, Y.' 8 'Dahlen, A.' 9 'Eriksson, P.O.' 10 'Evertsson, E.' 11 'Fex, T.' 12 'Fjellstrom, O.' 13 'Gustafsson, D.' 14 'Hallberg, C.' 15 'Hicks, R.' 16 'Jarkvist, E.' 17 'Johansson, C.' 18 'Kalies, I.' 19 'Kang, D.' 20 'Svalstedt Karlsson, B.' 21 'Kartberg, F.' 22 'Legnehed, A.' 23 'Lindqvist, A.M.' 24 'Martinsson, S.A.' 25 'Moberg, A.' 26 'Petersson, A.U.' 27 'Ridderstrom, M.' 28 'Thelin, A.' 29 'Tigerstrom, A.' 30 'Vinblad, J.' 31 'Xu, B.' 32 'Knecht, W.' 33 # _citation.id primary _citation.title 'Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sandmark, J.' 1 ? primary 'Althage, M.' 2 ? primary 'Andersson, G.M.K.' 3 ? primary 'Antonsson, T.' 4 ? primary 'Blaho, S.' 5 ? primary 'Bodin, C.' 6 ? primary 'Bostrom, J.' 7 ? primary 'Chen, Y.' 8 ? primary 'Dahlen, A.' 9 ? primary 'Eriksson, P.O.' 10 ? primary 'Evertsson, E.' 11 ? primary 'Fex, T.' 12 ? primary 'Fjellstrom, O.' 13 ? primary 'Gustafsson, D.' 14 ? primary 'Hallberg, C.' 15 ? primary 'Hicks, R.' 16 ? primary 'Jarkvist, E.' 17 ? primary 'Johansson, C.' 18 ? primary 'Kalies, I.' 19 ? primary 'Kang, D.' 20 ? primary 'Svalstedt Karlsson, B.' 21 ? primary 'Kartberg, F.' 22 ? primary 'Legnehed, A.' 23 ? primary 'Lindqvist, A.M.' 24 ? primary 'Martinsson, S.A.' 25 ? primary 'Moberg, A.' 26 ? primary 'Petersson, A.U.' 27 ? primary 'Ridderstrom, M.' 28 ? primary 'Thelin, A.' 29 ? primary 'Tigerstrom, A.' 30 ? primary 'Vinblad, J.' 31 ? primary 'Xu, B.' 32 ? primary 'Knecht, W.' 33 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'APOLIPOPROTEIN(A)' 9156.078 2 3.4.21.- YES 'KRINGLE IV-10, RESIDUES 4123-4201' ? 2 non-polymer syn '4-(aminomethyl)-N-(benzenesulfonyl)cyclohexanecarboxamide' 296.385 2 ? ? ? ? 3 water nat water 18.015 57 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'APO(A), LP(A)' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code QCYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADTGPWCFTMDPSIRWEYCALTRC _entity_poly.pdbx_seq_one_letter_code_can QCYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADTGPWCFTMDPSIRWEYCALTRC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '4-(aminomethyl)-N-(benzenesulfonyl)cyclohexanecarboxamide' 5C3 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 CYS n 1 3 TYR n 1 4 HIS n 1 5 GLY n 1 6 ASN n 1 7 GLY n 1 8 GLN n 1 9 SER n 1 10 TYR n 1 11 ARG n 1 12 GLY n 1 13 THR n 1 14 PHE n 1 15 SER n 1 16 THR n 1 17 THR n 1 18 VAL n 1 19 THR n 1 20 GLY n 1 21 ARG n 1 22 THR n 1 23 CYS n 1 24 GLN n 1 25 SER n 1 26 TRP n 1 27 SER n 1 28 SER n 1 29 MET n 1 30 THR n 1 31 PRO n 1 32 HIS n 1 33 ARG n 1 34 HIS n 1 35 GLN n 1 36 ARG n 1 37 THR n 1 38 PRO n 1 39 GLU n 1 40 ASN n 1 41 TYR n 1 42 PRO n 1 43 ASN n 1 44 ASP n 1 45 GLY n 1 46 LEU n 1 47 THR n 1 48 MET n 1 49 ASN n 1 50 TYR n 1 51 CYS n 1 52 ARG n 1 53 ASN n 1 54 PRO n 1 55 ASP n 1 56 ALA n 1 57 ASP n 1 58 THR n 1 59 GLY n 1 60 PRO n 1 61 TRP n 1 62 CYS n 1 63 PHE n 1 64 THR n 1 65 MET n 1 66 ASP n 1 67 PRO n 1 68 SER n 1 69 ILE n 1 70 ARG n 1 71 TRP n 1 72 GLU n 1 73 TYR n 1 74 CYS n 1 75 ALA n 1 76 LEU n 1 77 THR n 1 78 ARG n 1 79 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'KOMAGATAELLA PASTORIS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain X-33 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PPICZALPHA _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5C3 non-polymer . '4-(aminomethyl)-N-(benzenesulfonyl)cyclohexanecarboxamide' ? 'C14 H20 N2 O3 S' 296.385 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 0 ? ? ? A . n A 1 2 CYS 2 1 1 CYS CYS A . n A 1 3 TYR 3 2 2 TYR TYR A . n A 1 4 HIS 4 3 3 HIS HIS A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 GLY 7 6 6 GLY GLY A . n A 1 8 GLN 8 7 7 GLN GLN A . n A 1 9 SER 9 8 8 SER SER A . n A 1 10 TYR 10 9 9 TYR TYR A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 THR 13 12 12 THR THR A . n A 1 14 PHE 14 13 13 PHE PHE A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 THR 16 15 15 THR THR A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 THR 19 18 18 THR THR A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 ARG 21 20 20 ARG ARG A . n A 1 22 THR 22 21 21 THR THR A . n A 1 23 CYS 23 22 22 CYS CYS A . n A 1 24 GLN 24 23 23 GLN GLN A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 TRP 26 25 25 TRP TRP A . n A 1 27 SER 27 26 26 SER SER A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 MET 29 28 28 MET MET A . n A 1 30 THR 30 29 29 THR THR A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 HIS 32 31 31 HIS HIS A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 HIS 34 33 33 HIS HIS A . n A 1 35 GLN 35 34 34 GLN GLN A . n A 1 36 ARG 36 35 35 ARG ARG A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 MET 48 48 48 MET MET A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 GLY 59 60 60 GLY GLY A . n A 1 60 PRO 60 61 61 PRO PRO A . n A 1 61 TRP 61 62 62 TRP TRP A . n A 1 62 CYS 62 63 63 CYS CYS A . n A 1 63 PHE 63 64 64 PHE PHE A . n A 1 64 THR 64 65 65 THR THR A . n A 1 65 MET 65 66 66 MET MET A . n A 1 66 ASP 66 67 67 ASP ASP A . n A 1 67 PRO 67 68 68 PRO PRO A . n A 1 68 SER 68 69 69 SER SER A . n A 1 69 ILE 69 70 70 ILE ILE A . n A 1 70 ARG 70 71 71 ARG ARG A . n A 1 71 TRP 71 72 72 TRP TRP A . n A 1 72 GLU 72 73 73 GLU GLU A . n A 1 73 TYR 73 74 74 TYR TYR A . n A 1 74 CYS 74 75 75 CYS CYS A . n A 1 75 ALA 75 76 76 ALA ALA A . n A 1 76 LEU 76 77 77 LEU LEU A . n A 1 77 THR 77 78 78 THR THR A . n A 1 78 ARG 78 79 79 ARG ARG A . n A 1 79 CYS 79 80 80 CYS CYS A . n B 1 1 GLN 1 0 ? ? ? B . n B 1 2 CYS 2 1 1 CYS CYS B . n B 1 3 TYR 3 2 2 TYR TYR B . n B 1 4 HIS 4 3 3 HIS HIS B . n B 1 5 GLY 5 4 4 GLY GLY B . n B 1 6 ASN 6 5 5 ASN ASN B . n B 1 7 GLY 7 6 6 GLY GLY B . n B 1 8 GLN 8 7 7 GLN GLN B . n B 1 9 SER 9 8 8 SER SER B . n B 1 10 TYR 10 9 9 TYR TYR B . n B 1 11 ARG 11 10 10 ARG ARG B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 THR 13 12 12 THR THR B . n B 1 14 PHE 14 13 13 PHE PHE B . n B 1 15 SER 15 14 14 SER SER B . n B 1 16 THR 16 15 15 THR THR B . n B 1 17 THR 17 16 16 THR THR B . n B 1 18 VAL 18 17 17 VAL VAL B . n B 1 19 THR 19 18 18 THR THR B . n B 1 20 GLY 20 19 19 GLY GLY B . n B 1 21 ARG 21 20 20 ARG ARG B . n B 1 22 THR 22 21 21 THR THR B . n B 1 23 CYS 23 22 22 CYS CYS B . n B 1 24 GLN 24 23 23 GLN GLN B . n B 1 25 SER 25 24 24 SER SER B . n B 1 26 TRP 26 25 25 TRP TRP B . n B 1 27 SER 27 26 26 SER SER B . n B 1 28 SER 28 27 27 SER SER B . n B 1 29 MET 29 28 28 MET MET B . n B 1 30 THR 30 29 29 THR THR B . n B 1 31 PRO 31 30 30 PRO PRO B . n B 1 32 HIS 32 31 31 HIS HIS B . n B 1 33 ARG 33 32 32 ARG ARG B . n B 1 34 HIS 34 33 33 HIS HIS B . n B 1 35 GLN 35 34 34 GLN GLN B . n B 1 36 ARG 36 35 35 ARG ARG B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 PRO 38 38 38 PRO PRO B . n B 1 39 GLU 39 39 39 GLU GLU B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 TYR 41 41 41 TYR TYR B . n B 1 42 PRO 42 42 42 PRO PRO B . n B 1 43 ASN 43 43 43 ASN ASN B . n B 1 44 ASP 44 44 44 ASP ASP B . n B 1 45 GLY 45 45 45 GLY GLY B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 MET 48 48 48 MET MET B . n B 1 49 ASN 49 49 49 ASN ASN B . n B 1 50 TYR 50 50 50 TYR TYR B . n B 1 51 CYS 51 51 51 CYS CYS B . n B 1 52 ARG 52 52 52 ARG ARG B . n B 1 53 ASN 53 53 53 ASN ASN B . n B 1 54 PRO 54 54 54 PRO PRO B . n B 1 55 ASP 55 55 55 ASP ASP B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 ASP 57 57 57 ASP ASP B . n B 1 58 THR 58 58 58 THR THR B . n B 1 59 GLY 59 60 60 GLY GLY B . n B 1 60 PRO 60 61 61 PRO PRO B . n B 1 61 TRP 61 62 62 TRP TRP B . n B 1 62 CYS 62 63 63 CYS CYS B . n B 1 63 PHE 63 64 64 PHE PHE B . n B 1 64 THR 64 65 65 THR THR B . n B 1 65 MET 65 66 66 MET MET B . n B 1 66 ASP 66 67 67 ASP ASP B . n B 1 67 PRO 67 68 68 PRO PRO B . n B 1 68 SER 68 69 69 SER SER B . n B 1 69 ILE 69 70 70 ILE ILE B . n B 1 70 ARG 70 71 71 ARG ARG B . n B 1 71 TRP 71 72 72 TRP TRP B . n B 1 72 GLU 72 73 73 GLU GLU B . n B 1 73 TYR 73 74 74 TYR TYR B . n B 1 74 CYS 74 75 75 CYS CYS B . n B 1 75 ALA 75 76 76 ALA ALA B . n B 1 76 LEU 76 77 77 LEU LEU B . n B 1 77 THR 77 78 78 THR THR B . n B 1 78 ARG 78 79 79 ARG ARG B . n B 1 79 CYS 79 80 80 CYS CYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 5C3 1 1081 1081 5C3 5C3 A . D 2 5C3 1 1081 1081 5C3 5C3 B . E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . E 3 HOH 3 2003 2003 HOH HOH A . E 3 HOH 4 2004 2004 HOH HOH A . E 3 HOH 5 2005 2005 HOH HOH A . E 3 HOH 6 2006 2006 HOH HOH A . E 3 HOH 7 2007 2007 HOH HOH A . E 3 HOH 8 2008 2008 HOH HOH A . E 3 HOH 9 2009 2009 HOH HOH A . E 3 HOH 10 2010 2010 HOH HOH A . E 3 HOH 11 2011 2011 HOH HOH A . E 3 HOH 12 2012 2012 HOH HOH A . E 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 14 2014 2014 HOH HOH A . E 3 HOH 15 2015 2015 HOH HOH A . E 3 HOH 16 2016 2016 HOH HOH A . E 3 HOH 17 2017 2017 HOH HOH A . E 3 HOH 18 2018 2018 HOH HOH A . E 3 HOH 19 2019 2019 HOH HOH A . E 3 HOH 20 2020 2020 HOH HOH A . E 3 HOH 21 2021 2021 HOH HOH A . E 3 HOH 22 2022 2022 HOH HOH A . E 3 HOH 23 2023 2023 HOH HOH A . E 3 HOH 24 2024 2024 HOH HOH A . E 3 HOH 25 2025 2025 HOH HOH A . E 3 HOH 26 2026 2026 HOH HOH A . E 3 HOH 27 2027 2027 HOH HOH A . E 3 HOH 28 2028 2028 HOH HOH A . E 3 HOH 29 2029 2029 HOH HOH A . E 3 HOH 30 2030 2030 HOH HOH A . E 3 HOH 31 2031 2031 HOH HOH A . E 3 HOH 32 2032 2032 HOH HOH A . E 3 HOH 33 2033 2033 HOH HOH A . E 3 HOH 34 2034 2034 HOH HOH A . E 3 HOH 35 2035 2035 HOH HOH A . F 3 HOH 1 2001 2001 HOH HOH B . F 3 HOH 2 2002 2002 HOH HOH B . F 3 HOH 3 2003 2003 HOH HOH B . F 3 HOH 4 2004 2004 HOH HOH B . F 3 HOH 5 2005 2005 HOH HOH B . F 3 HOH 6 2006 2006 HOH HOH B . F 3 HOH 7 2007 2007 HOH HOH B . F 3 HOH 8 2008 2008 HOH HOH B . F 3 HOH 9 2009 2009 HOH HOH B . F 3 HOH 10 2010 2010 HOH HOH B . F 3 HOH 11 2011 2011 HOH HOH B . F 3 HOH 12 2012 2012 HOH HOH B . F 3 HOH 13 2013 2013 HOH HOH B . F 3 HOH 14 2014 2014 HOH HOH B . F 3 HOH 15 2015 2015 HOH HOH B . F 3 HOH 16 2016 2016 HOH HOH B . F 3 HOH 17 2017 2017 HOH HOH B . F 3 HOH 18 2018 2018 HOH HOH B . F 3 HOH 19 2019 2019 HOH HOH B . F 3 HOH 20 2020 2020 HOH HOH B . F 3 HOH 21 2021 2021 HOH HOH B . F 3 HOH 22 2022 2022 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.7.0029 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 4BV5 _cell.length_a 24.410 _cell.length_b 45.250 _cell.length_c 56.100 _cell.angle_alpha 90.00 _cell.angle_beta 90.67 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BV5 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 4BV5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.7 _exptl_crystal.density_percent_sol 29 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '30% PEG400, 0.1M CACL2, 0.1M NAOAC PH 4.6' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU A200-CU' _diffrn_detector.pdbx_collection_date 2010-10-04 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4BV5 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.00 _reflns.d_resolution_high 2.10 _reflns.number_obs 6931 _reflns.number_all ? _reflns.percent_possible_obs 95.4 _reflns.pdbx_Rmerge_I_obs 0.03 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 5.90 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.15 _reflns_shell.percent_possible_all 92.0 _reflns_shell.Rmerge_I_obs 0.98 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.80 _reflns_shell.pdbx_redundancy 6.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4BV5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6303 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.06 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 91.23 _refine.ls_R_factor_obs 0.19187 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18986 _refine.ls_R_factor_R_free 0.23013 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 314 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.931 _refine.correlation_coeff_Fo_to_Fc_free 0.896 _refine.B_iso_mean 12.524 _refine.aniso_B[1][1] -0.29 _refine.aniso_B[2][2] -0.88 _refine.aniso_B[3][3] 1.17 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.31 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 3KIV' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.526 _refine.pdbx_overall_ESU_R_Free 0.235 _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1258 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 1355 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 28.06 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.019 ? 1351 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.751 1.941 ? 1843 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.463 5.000 ? 152 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.215 22.174 ? 69 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.315 15.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.113 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.091 0.200 ? 175 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 1098 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.155 _refine_ls_shell.number_reflns_R_work 416 _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.percent_reflns_obs 81.53 _refine_ls_shell.R_factor_R_free 0.378 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 21 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.999900 _struct_ncs_oper.matrix[1][2] 0.000098 _struct_ncs_oper.matrix[1][3] 0.013790 _struct_ncs_oper.matrix[2][1] 0.000096 _struct_ncs_oper.matrix[2][2] -1.000000 _struct_ncs_oper.matrix[2][3] 0.000151 _struct_ncs_oper.matrix[3][1] 0.013790 _struct_ncs_oper.matrix[3][2] -0.000150 _struct_ncs_oper.matrix[3][3] -0.999900 _struct_ncs_oper.vector[1] 11.90170 _struct_ncs_oper.vector[2] 25.70490 _struct_ncs_oper.vector[3] 28.12560 # _database_PDB_matrix.entry_id 4BV5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4BV5 _struct.title 'Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4BV5 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, CARDIOVASCULAR DISEASE, OPTICAL BIOSENSORS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code APOA_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P08519 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4BV5 A 1 ? 79 ? P08519 4123 ? 4201 ? 0 80 2 1 4BV5 B 1 ? 79 ? P08519 4123 ? 4201 ? 0 80 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4BV5 ALA A 75 ? UNP P08519 ASN 4197 'engineered mutation' 76 1 2 4BV5 ALA B 75 ? UNP P08519 ASN 4197 'engineered mutation' 76 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 79 SG ? ? A CYS 1 A CYS 80 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf2 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 62 SG ? ? A CYS 22 A CYS 63 1_555 ? ? ? ? ? ? ? 2.011 ? ? disulf3 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 74 SG ? ? A CYS 51 A CYS 75 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf4 disulf ? ? B CYS 2 SG ? ? ? 1_555 B CYS 79 SG ? ? B CYS 1 B CYS 80 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf5 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 62 SG ? ? B CYS 22 B CYS 63 1_555 ? ? ? ? ? ? ? 2.005 ? ? disulf6 disulf ? ? B CYS 51 SG ? ? ? 1_555 B CYS 74 SG ? ? B CYS 51 B CYS 75 1_555 ? ? ? ? ? ? ? 2.023 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 2 ? CYS A 79 ? CYS A 1 ? 1_555 CYS A 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 23 ? CYS A 62 ? CYS A 22 ? 1_555 CYS A 63 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 51 ? CYS A 74 ? CYS A 51 ? 1_555 CYS A 75 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 2 ? CYS B 79 ? CYS B 1 ? 1_555 CYS B 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 23 ? CYS B 62 ? CYS B 22 ? 1_555 CYS B 63 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 51 ? CYS B 74 ? CYS B 51 ? 1_555 CYS B 75 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 30 A . ? THR 29 A PRO 31 A ? PRO 30 A 1 6.10 2 THR 30 B . ? THR 29 B PRO 31 B ? PRO 30 B 1 1.57 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? BA ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel BA 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TRP A 61 ? PHE A 63 ? TRP A 62 PHE A 64 AA 2 TRP A 71 ? TYR A 73 ? TRP A 72 TYR A 74 BA 1 TRP B 61 ? PHE B 63 ? TRP B 62 PHE B 64 BA 2 TRP B 71 ? TYR B 73 ? TRP B 72 TYR B 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N CYS A 62 ? N CYS A 63 O GLU A 72 ? O GLU A 73 BA 1 2 N CYS B 62 ? N CYS B 63 O GLU B 72 ? O GLU B 73 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 5C3 1081 ? 12 'BINDING SITE FOR RESIDUE 5C3 A 1081' AC2 Software B 5C3 1081 ? 11 'BINDING SITE FOR RESIDUE 5C3 B 1081' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 HIS A 34 ? HIS A 33 . ? 1_555 ? 2 AC1 12 GLN A 35 ? GLN A 34 . ? 1_555 ? 3 AC1 12 ARG A 36 ? ARG A 35 . ? 1_555 ? 4 AC1 12 ASP A 55 ? ASP A 55 . ? 1_555 ? 5 AC1 12 ASP A 57 ? ASP A 57 . ? 1_555 ? 6 AC1 12 TRP A 61 ? TRP A 62 . ? 1_555 ? 7 AC1 12 PHE A 63 ? PHE A 64 . ? 1_555 ? 8 AC1 12 ARG A 70 ? ARG A 71 . ? 1_555 ? 9 AC1 12 TRP A 71 ? TRP A 72 . ? 1_555 ? 10 AC1 12 ASP B 66 ? ASP B 67 . ? 1_655 ? 11 AC1 12 PRO B 67 ? PRO B 68 . ? 1_655 ? 12 AC1 12 SER B 68 ? SER B 69 . ? 1_655 ? 13 AC2 11 ASP A 66 ? ASP A 67 . ? 1_555 ? 14 AC2 11 PRO A 67 ? PRO A 68 . ? 1_555 ? 15 AC2 11 SER A 68 ? SER A 69 . ? 1_555 ? 16 AC2 11 HIS B 34 ? HIS B 33 . ? 1_555 ? 17 AC2 11 GLN B 35 ? GLN B 34 . ? 1_555 ? 18 AC2 11 ARG B 36 ? ARG B 35 . ? 1_555 ? 19 AC2 11 ASP B 55 ? ASP B 55 . ? 1_555 ? 20 AC2 11 ASP B 57 ? ASP B 57 . ? 1_555 ? 21 AC2 11 TRP B 61 ? TRP B 62 . ? 1_555 ? 22 AC2 11 ARG B 70 ? ARG B 71 . ? 1_555 ? 23 AC2 11 TRP B 71 ? TRP B 72 . ? 1_555 ? # _pdbx_entry_details.entry_id 4BV5 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'KRINGLE IV-10 DOMAIN, N76A MUTATION' _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 N _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 39 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CA _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 39 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 A _pdbx_validate_rmsd_bond.bond_value 1.611 _pdbx_validate_rmsd_bond.bond_target_value 1.459 _pdbx_validate_rmsd_bond.bond_deviation 0.152 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.020 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 14 ? ? -143.11 37.50 2 1 ARG A 35 ? ? -103.62 59.59 3 1 TYR A 41 ? ? -119.15 75.01 4 1 MET A 48 ? ? 53.13 -131.53 5 1 ARG B 10 ? ? -140.96 19.22 6 1 SER B 14 ? ? -140.28 38.77 7 1 ARG B 35 ? ? -98.54 54.48 8 1 MET B 48 ? ? 48.50 -127.67 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id GLU _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 39 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id B _pdbx_validate_main_chain_plane.improper_torsion_angle -13.27 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 0 ? A GLN 1 2 1 Y 1 B GLN 0 ? B GLN 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5C3 C01 C Y N 1 5C3 C02 C Y N 2 5C3 C03 C Y N 3 5C3 C04 C Y N 4 5C3 C05 C Y N 5 5C3 C06 C Y N 6 5C3 O08 O N N 7 5C3 N09 N N N 8 5C3 C10 C N N 9 5C3 S11 S N N 10 5C3 NP2 N N N 11 5C3 O13 O N N 12 5C3 O14 O N N 13 5C3 C15 C N N 14 5C3 C16 C N N 15 5C3 C17 C N N 16 5C3 C18 C N N 17 5C3 C19 C N N 18 5C3 C11 C N N 19 5C3 C20 C N N 20 5C3 H01 H N N 21 5C3 H02 H N N 22 5C3 H06 H N N 23 5C3 H04 H N N 24 5C3 H05 H N N 25 5C3 H091 H N N 26 5C3 H092 H N N 27 5C3 H101 H N N 28 5C3 H102 H N N 29 5C3 H15 H N N 30 5C3 HP2 H N N 31 5C3 H161 H N N 32 5C3 H162 H N N 33 5C3 H201 H N N 34 5C3 H202 H N N 35 5C3 H171 H N N 36 5C3 H172 H N N 37 5C3 H18 H N N 38 5C3 H191 H N N 39 5C3 H192 H N N 40 ALA N N N N 41 ALA CA C N S 42 ALA C C N N 43 ALA O O N N 44 ALA CB C N N 45 ALA OXT O N N 46 ALA H H N N 47 ALA H2 H N N 48 ALA HA H N N 49 ALA HB1 H N N 50 ALA HB2 H N N 51 ALA HB3 H N N 52 ALA HXT H N N 53 ARG N N N N 54 ARG CA C N S 55 ARG C C N N 56 ARG O O N N 57 ARG CB C N N 58 ARG CG C N N 59 ARG CD C N N 60 ARG NE N N N 61 ARG CZ C N N 62 ARG NH1 N N N 63 ARG NH2 N N N 64 ARG OXT O N N 65 ARG H H N N 66 ARG H2 H N N 67 ARG HA H N N 68 ARG HB2 H N N 69 ARG HB3 H N N 70 ARG HG2 H N N 71 ARG HG3 H N N 72 ARG HD2 H N N 73 ARG HD3 H N N 74 ARG HE H N N 75 ARG HH11 H N N 76 ARG HH12 H N N 77 ARG HH21 H N N 78 ARG HH22 H N N 79 ARG HXT H N N 80 ASN N N N N 81 ASN CA C N S 82 ASN C C N N 83 ASN O O N N 84 ASN CB C N N 85 ASN CG C N N 86 ASN OD1 O N N 87 ASN ND2 N N N 88 ASN OXT O N N 89 ASN H H N N 90 ASN H2 H N N 91 ASN HA H N N 92 ASN HB2 H N N 93 ASN HB3 H N N 94 ASN HD21 H N N 95 ASN HD22 H N N 96 ASN HXT H N N 97 ASP N N N N 98 ASP CA C N S 99 ASP C C N N 100 ASP O O N N 101 ASP CB C N N 102 ASP CG C N N 103 ASP OD1 O N N 104 ASP OD2 O N N 105 ASP OXT O N N 106 ASP H H N N 107 ASP H2 H N N 108 ASP HA H N N 109 ASP HB2 H N N 110 ASP HB3 H N N 111 ASP HD2 H N N 112 ASP HXT H N N 113 CYS N N N N 114 CYS CA C N R 115 CYS C C N N 116 CYS O O N N 117 CYS CB C N N 118 CYS SG S N N 119 CYS OXT O N N 120 CYS H H N N 121 CYS H2 H N N 122 CYS HA H N N 123 CYS HB2 H N N 124 CYS HB3 H N N 125 CYS HG H N N 126 CYS HXT H N N 127 GLN N N N N 128 GLN CA C N S 129 GLN C C N N 130 GLN O O N N 131 GLN CB C N N 132 GLN CG C N N 133 GLN CD C N N 134 GLN OE1 O N N 135 GLN NE2 N N N 136 GLN OXT O N N 137 GLN H H N N 138 GLN H2 H N N 139 GLN HA H N N 140 GLN HB2 H N N 141 GLN HB3 H N N 142 GLN HG2 H N N 143 GLN HG3 H N N 144 GLN HE21 H N N 145 GLN HE22 H N N 146 GLN HXT H N N 147 GLU N N N N 148 GLU CA C N S 149 GLU C C N N 150 GLU O O N N 151 GLU CB C N N 152 GLU CG C N N 153 GLU CD C N N 154 GLU OE1 O N N 155 GLU OE2 O N N 156 GLU OXT O N N 157 GLU H H N N 158 GLU H2 H N N 159 GLU HA H N N 160 GLU HB2 H N N 161 GLU HB3 H N N 162 GLU HG2 H N N 163 GLU HG3 H N N 164 GLU HE2 H N N 165 GLU HXT H N N 166 GLY N N N N 167 GLY CA C N N 168 GLY C C N N 169 GLY O O N N 170 GLY OXT O N N 171 GLY H H N N 172 GLY H2 H N N 173 GLY HA2 H N N 174 GLY HA3 H N N 175 GLY HXT H N N 176 HIS N N N N 177 HIS CA C N S 178 HIS C C N N 179 HIS O O N N 180 HIS CB C N N 181 HIS CG C Y N 182 HIS ND1 N Y N 183 HIS CD2 C Y N 184 HIS CE1 C Y N 185 HIS NE2 N Y N 186 HIS OXT O N N 187 HIS H H N N 188 HIS H2 H N N 189 HIS HA H N N 190 HIS HB2 H N N 191 HIS HB3 H N N 192 HIS HD1 H N N 193 HIS HD2 H N N 194 HIS HE1 H N N 195 HIS HE2 H N N 196 HIS HXT H N N 197 HOH O O N N 198 HOH H1 H N N 199 HOH H2 H N N 200 ILE N N N N 201 ILE CA C N S 202 ILE C C N N 203 ILE O O N N 204 ILE CB C N S 205 ILE CG1 C N N 206 ILE CG2 C N N 207 ILE CD1 C N N 208 ILE OXT O N N 209 ILE H H N N 210 ILE H2 H N N 211 ILE HA H N N 212 ILE HB H N N 213 ILE HG12 H N N 214 ILE HG13 H N N 215 ILE HG21 H N N 216 ILE HG22 H N N 217 ILE HG23 H N N 218 ILE HD11 H N N 219 ILE HD12 H N N 220 ILE HD13 H N N 221 ILE HXT H N N 222 LEU N N N N 223 LEU CA C N S 224 LEU C C N N 225 LEU O O N N 226 LEU CB C N N 227 LEU CG C N N 228 LEU CD1 C N N 229 LEU CD2 C N N 230 LEU OXT O N N 231 LEU H H N N 232 LEU H2 H N N 233 LEU HA H N N 234 LEU HB2 H N N 235 LEU HB3 H N N 236 LEU HG H N N 237 LEU HD11 H N N 238 LEU HD12 H N N 239 LEU HD13 H N N 240 LEU HD21 H N N 241 LEU HD22 H N N 242 LEU HD23 H N N 243 LEU HXT H N N 244 MET N N N N 245 MET CA C N S 246 MET C C N N 247 MET O O N N 248 MET CB C N N 249 MET CG C N N 250 MET SD S N N 251 MET CE C N N 252 MET OXT O N N 253 MET H H N N 254 MET H2 H N N 255 MET HA H N N 256 MET HB2 H N N 257 MET HB3 H N N 258 MET HG2 H N N 259 MET HG3 H N N 260 MET HE1 H N N 261 MET HE2 H N N 262 MET HE3 H N N 263 MET HXT H N N 264 PHE N N N N 265 PHE CA C N S 266 PHE C C N N 267 PHE O O N N 268 PHE CB C N N 269 PHE CG C Y N 270 PHE CD1 C Y N 271 PHE CD2 C Y N 272 PHE CE1 C Y N 273 PHE CE2 C Y N 274 PHE CZ C Y N 275 PHE OXT O N N 276 PHE H H N N 277 PHE H2 H N N 278 PHE HA H N N 279 PHE HB2 H N N 280 PHE HB3 H N N 281 PHE HD1 H N N 282 PHE HD2 H N N 283 PHE HE1 H N N 284 PHE HE2 H N N 285 PHE HZ H N N 286 PHE HXT H N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 VAL N N N N 387 VAL CA C N S 388 VAL C C N N 389 VAL O O N N 390 VAL CB C N N 391 VAL CG1 C N N 392 VAL CG2 C N N 393 VAL OXT O N N 394 VAL H H N N 395 VAL H2 H N N 396 VAL HA H N N 397 VAL HB H N N 398 VAL HG11 H N N 399 VAL HG12 H N N 400 VAL HG13 H N N 401 VAL HG21 H N N 402 VAL HG22 H N N 403 VAL HG23 H N N 404 VAL HXT H N N 405 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5C3 C01 C02 sing Y N 1 5C3 C01 C06 doub Y N 2 5C3 C02 C03 doub Y N 3 5C3 C03 C04 sing Y N 4 5C3 C03 S11 sing N N 5 5C3 C04 C05 doub Y N 6 5C3 C05 C06 sing Y N 7 5C3 O08 C11 doub N N 8 5C3 N09 C10 sing N N 9 5C3 C10 C15 sing N N 10 5C3 S11 NP2 sing N N 11 5C3 S11 O13 doub N N 12 5C3 S11 O14 doub N N 13 5C3 NP2 C11 sing N N 14 5C3 C15 C16 sing N N 15 5C3 C15 C20 sing N N 16 5C3 C16 C17 sing N N 17 5C3 C17 C18 sing N N 18 5C3 C18 C19 sing N N 19 5C3 C18 C11 sing N N 20 5C3 C19 C20 sing N N 21 5C3 C01 H01 sing N N 22 5C3 C02 H02 sing N N 23 5C3 C06 H06 sing N N 24 5C3 C04 H04 sing N N 25 5C3 C05 H05 sing N N 26 5C3 N09 H091 sing N N 27 5C3 N09 H092 sing N N 28 5C3 C10 H101 sing N N 29 5C3 C10 H102 sing N N 30 5C3 C15 H15 sing N N 31 5C3 NP2 HP2 sing N N 32 5C3 C16 H161 sing N N 33 5C3 C16 H162 sing N N 34 5C3 C20 H201 sing N N 35 5C3 C20 H202 sing N N 36 5C3 C17 H171 sing N N 37 5C3 C17 H172 sing N N 38 5C3 C18 H18 sing N N 39 5C3 C19 H191 sing N N 40 5C3 C19 H192 sing N N 41 ALA N CA sing N N 42 ALA N H sing N N 43 ALA N H2 sing N N 44 ALA CA C sing N N 45 ALA CA CB sing N N 46 ALA CA HA sing N N 47 ALA C O doub N N 48 ALA C OXT sing N N 49 ALA CB HB1 sing N N 50 ALA CB HB2 sing N N 51 ALA CB HB3 sing N N 52 ALA OXT HXT sing N N 53 ARG N CA sing N N 54 ARG N H sing N N 55 ARG N H2 sing N N 56 ARG CA C sing N N 57 ARG CA CB sing N N 58 ARG CA HA sing N N 59 ARG C O doub N N 60 ARG C OXT sing N N 61 ARG CB CG sing N N 62 ARG CB HB2 sing N N 63 ARG CB HB3 sing N N 64 ARG CG CD sing N N 65 ARG CG HG2 sing N N 66 ARG CG HG3 sing N N 67 ARG CD NE sing N N 68 ARG CD HD2 sing N N 69 ARG CD HD3 sing N N 70 ARG NE CZ sing N N 71 ARG NE HE sing N N 72 ARG CZ NH1 sing N N 73 ARG CZ NH2 doub N N 74 ARG NH1 HH11 sing N N 75 ARG NH1 HH12 sing N N 76 ARG NH2 HH21 sing N N 77 ARG NH2 HH22 sing N N 78 ARG OXT HXT sing N N 79 ASN N CA sing N N 80 ASN N H sing N N 81 ASN N H2 sing N N 82 ASN CA C sing N N 83 ASN CA CB sing N N 84 ASN CA HA sing N N 85 ASN C O doub N N 86 ASN C OXT sing N N 87 ASN CB CG sing N N 88 ASN CB HB2 sing N N 89 ASN CB HB3 sing N N 90 ASN CG OD1 doub N N 91 ASN CG ND2 sing N N 92 ASN ND2 HD21 sing N N 93 ASN ND2 HD22 sing N N 94 ASN OXT HXT sing N N 95 ASP N CA sing N N 96 ASP N H sing N N 97 ASP N H2 sing N N 98 ASP CA C sing N N 99 ASP CA CB sing N N 100 ASP CA HA sing N N 101 ASP C O doub N N 102 ASP C OXT sing N N 103 ASP CB CG sing N N 104 ASP CB HB2 sing N N 105 ASP CB HB3 sing N N 106 ASP CG OD1 doub N N 107 ASP CG OD2 sing N N 108 ASP OD2 HD2 sing N N 109 ASP OXT HXT sing N N 110 CYS N CA sing N N 111 CYS N H sing N N 112 CYS N H2 sing N N 113 CYS CA C sing N N 114 CYS CA CB sing N N 115 CYS CA HA sing N N 116 CYS C O doub N N 117 CYS C OXT sing N N 118 CYS CB SG sing N N 119 CYS CB HB2 sing N N 120 CYS CB HB3 sing N N 121 CYS SG HG sing N N 122 CYS OXT HXT sing N N 123 GLN N CA sing N N 124 GLN N H sing N N 125 GLN N H2 sing N N 126 GLN CA C sing N N 127 GLN CA CB sing N N 128 GLN CA HA sing N N 129 GLN C O doub N N 130 GLN C OXT sing N N 131 GLN CB CG sing N N 132 GLN CB HB2 sing N N 133 GLN CB HB3 sing N N 134 GLN CG CD sing N N 135 GLN CG HG2 sing N N 136 GLN CG HG3 sing N N 137 GLN CD OE1 doub N N 138 GLN CD NE2 sing N N 139 GLN NE2 HE21 sing N N 140 GLN NE2 HE22 sing N N 141 GLN OXT HXT sing N N 142 GLU N CA sing N N 143 GLU N H sing N N 144 GLU N H2 sing N N 145 GLU CA C sing N N 146 GLU CA CB sing N N 147 GLU CA HA sing N N 148 GLU C O doub N N 149 GLU C OXT sing N N 150 GLU CB CG sing N N 151 GLU CB HB2 sing N N 152 GLU CB HB3 sing N N 153 GLU CG CD sing N N 154 GLU CG HG2 sing N N 155 GLU CG HG3 sing N N 156 GLU CD OE1 doub N N 157 GLU CD OE2 sing N N 158 GLU OE2 HE2 sing N N 159 GLU OXT HXT sing N N 160 GLY N CA sing N N 161 GLY N H sing N N 162 GLY N H2 sing N N 163 GLY CA C sing N N 164 GLY CA HA2 sing N N 165 GLY CA HA3 sing N N 166 GLY C O doub N N 167 GLY C OXT sing N N 168 GLY OXT HXT sing N N 169 HIS N CA sing N N 170 HIS N H sing N N 171 HIS N H2 sing N N 172 HIS CA C sing N N 173 HIS CA CB sing N N 174 HIS CA HA sing N N 175 HIS C O doub N N 176 HIS C OXT sing N N 177 HIS CB CG sing N N 178 HIS CB HB2 sing N N 179 HIS CB HB3 sing N N 180 HIS CG ND1 sing Y N 181 HIS CG CD2 doub Y N 182 HIS ND1 CE1 doub Y N 183 HIS ND1 HD1 sing N N 184 HIS CD2 NE2 sing Y N 185 HIS CD2 HD2 sing N N 186 HIS CE1 NE2 sing Y N 187 HIS CE1 HE1 sing N N 188 HIS NE2 HE2 sing N N 189 HIS OXT HXT sing N N 190 HOH O H1 sing N N 191 HOH O H2 sing N N 192 ILE N CA sing N N 193 ILE N H sing N N 194 ILE N H2 sing N N 195 ILE CA C sing N N 196 ILE CA CB sing N N 197 ILE CA HA sing N N 198 ILE C O doub N N 199 ILE C OXT sing N N 200 ILE CB CG1 sing N N 201 ILE CB CG2 sing N N 202 ILE CB HB sing N N 203 ILE CG1 CD1 sing N N 204 ILE CG1 HG12 sing N N 205 ILE CG1 HG13 sing N N 206 ILE CG2 HG21 sing N N 207 ILE CG2 HG22 sing N N 208 ILE CG2 HG23 sing N N 209 ILE CD1 HD11 sing N N 210 ILE CD1 HD12 sing N N 211 ILE CD1 HD13 sing N N 212 ILE OXT HXT sing N N 213 LEU N CA sing N N 214 LEU N H sing N N 215 LEU N H2 sing N N 216 LEU CA C sing N N 217 LEU CA CB sing N N 218 LEU CA HA sing N N 219 LEU C O doub N N 220 LEU C OXT sing N N 221 LEU CB CG sing N N 222 LEU CB HB2 sing N N 223 LEU CB HB3 sing N N 224 LEU CG CD1 sing N N 225 LEU CG CD2 sing N N 226 LEU CG HG sing N N 227 LEU CD1 HD11 sing N N 228 LEU CD1 HD12 sing N N 229 LEU CD1 HD13 sing N N 230 LEU CD2 HD21 sing N N 231 LEU CD2 HD22 sing N N 232 LEU CD2 HD23 sing N N 233 LEU OXT HXT sing N N 234 MET N CA sing N N 235 MET N H sing N N 236 MET N H2 sing N N 237 MET CA C sing N N 238 MET CA CB sing N N 239 MET CA HA sing N N 240 MET C O doub N N 241 MET C OXT sing N N 242 MET CB CG sing N N 243 MET CB HB2 sing N N 244 MET CB HB3 sing N N 245 MET CG SD sing N N 246 MET CG HG2 sing N N 247 MET CG HG3 sing N N 248 MET SD CE sing N N 249 MET CE HE1 sing N N 250 MET CE HE2 sing N N 251 MET CE HE3 sing N N 252 MET OXT HXT sing N N 253 PHE N CA sing N N 254 PHE N H sing N N 255 PHE N H2 sing N N 256 PHE CA C sing N N 257 PHE CA CB sing N N 258 PHE CA HA sing N N 259 PHE C O doub N N 260 PHE C OXT sing N N 261 PHE CB CG sing N N 262 PHE CB HB2 sing N N 263 PHE CB HB3 sing N N 264 PHE CG CD1 doub Y N 265 PHE CG CD2 sing Y N 266 PHE CD1 CE1 sing Y N 267 PHE CD1 HD1 sing N N 268 PHE CD2 CE2 doub Y N 269 PHE CD2 HD2 sing N N 270 PHE CE1 CZ doub Y N 271 PHE CE1 HE1 sing N N 272 PHE CE2 CZ sing Y N 273 PHE CE2 HE2 sing N N 274 PHE CZ HZ sing N N 275 PHE OXT HXT sing N N 276 PRO N CA sing N N 277 PRO N CD sing N N 278 PRO N H sing N N 279 PRO CA C sing N N 280 PRO CA CB sing N N 281 PRO CA HA sing N N 282 PRO C O doub N N 283 PRO C OXT sing N N 284 PRO CB CG sing N N 285 PRO CB HB2 sing N N 286 PRO CB HB3 sing N N 287 PRO CG CD sing N N 288 PRO CG HG2 sing N N 289 PRO CG HG3 sing N N 290 PRO CD HD2 sing N N 291 PRO CD HD3 sing N N 292 PRO OXT HXT sing N N 293 SER N CA sing N N 294 SER N H sing N N 295 SER N H2 sing N N 296 SER CA C sing N N 297 SER CA CB sing N N 298 SER CA HA sing N N 299 SER C O doub N N 300 SER C OXT sing N N 301 SER CB OG sing N N 302 SER CB HB2 sing N N 303 SER CB HB3 sing N N 304 SER OG HG sing N N 305 SER OXT HXT sing N N 306 THR N CA sing N N 307 THR N H sing N N 308 THR N H2 sing N N 309 THR CA C sing N N 310 THR CA CB sing N N 311 THR CA HA sing N N 312 THR C O doub N N 313 THR C OXT sing N N 314 THR CB OG1 sing N N 315 THR CB CG2 sing N N 316 THR CB HB sing N N 317 THR OG1 HG1 sing N N 318 THR CG2 HG21 sing N N 319 THR CG2 HG22 sing N N 320 THR CG2 HG23 sing N N 321 THR OXT HXT sing N N 322 TRP N CA sing N N 323 TRP N H sing N N 324 TRP N H2 sing N N 325 TRP CA C sing N N 326 TRP CA CB sing N N 327 TRP CA HA sing N N 328 TRP C O doub N N 329 TRP C OXT sing N N 330 TRP CB CG sing N N 331 TRP CB HB2 sing N N 332 TRP CB HB3 sing N N 333 TRP CG CD1 doub Y N 334 TRP CG CD2 sing Y N 335 TRP CD1 NE1 sing Y N 336 TRP CD1 HD1 sing N N 337 TRP CD2 CE2 doub Y N 338 TRP CD2 CE3 sing Y N 339 TRP NE1 CE2 sing Y N 340 TRP NE1 HE1 sing N N 341 TRP CE2 CZ2 sing Y N 342 TRP CE3 CZ3 doub Y N 343 TRP CE3 HE3 sing N N 344 TRP CZ2 CH2 doub Y N 345 TRP CZ2 HZ2 sing N N 346 TRP CZ3 CH2 sing Y N 347 TRP CZ3 HZ3 sing N N 348 TRP CH2 HH2 sing N N 349 TRP OXT HXT sing N N 350 TYR N CA sing N N 351 TYR N H sing N N 352 TYR N H2 sing N N 353 TYR CA C sing N N 354 TYR CA CB sing N N 355 TYR CA HA sing N N 356 TYR C O doub N N 357 TYR C OXT sing N N 358 TYR CB CG sing N N 359 TYR CB HB2 sing N N 360 TYR CB HB3 sing N N 361 TYR CG CD1 doub Y N 362 TYR CG CD2 sing Y N 363 TYR CD1 CE1 sing Y N 364 TYR CD1 HD1 sing N N 365 TYR CD2 CE2 doub Y N 366 TYR CD2 HD2 sing N N 367 TYR CE1 CZ doub Y N 368 TYR CE1 HE1 sing N N 369 TYR CE2 CZ sing Y N 370 TYR CE2 HE2 sing N N 371 TYR CZ OH sing N N 372 TYR OH HH sing N N 373 TYR OXT HXT sing N N 374 VAL N CA sing N N 375 VAL N H sing N N 376 VAL N H2 sing N N 377 VAL CA C sing N N 378 VAL CA CB sing N N 379 VAL CA HA sing N N 380 VAL C O doub N N 381 VAL C OXT sing N N 382 VAL CB CG1 sing N N 383 VAL CB CG2 sing N N 384 VAL CB HB sing N N 385 VAL CG1 HG11 sing N N 386 VAL CG1 HG12 sing N N 387 VAL CG1 HG13 sing N N 388 VAL CG2 HG21 sing N N 389 VAL CG2 HG22 sing N N 390 VAL CG2 HG23 sing N N 391 VAL OXT HXT sing N N 392 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KIV _pdbx_initial_refinement_model.details 'PDB ENTRY 3KIV' # _atom_sites.entry_id 4BV5 _atom_sites.fract_transf_matrix[1][1] 0.040967 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000479 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022099 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017827 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_