HEADER CELL CYCLE 15-JUL-13 4BXR TITLE STRUCTURE OF THE WILD-TYPE TCP10 DOMAIN OF DANIO RERIO CPAP IN COMPLEX TITLE 2 WITH A PEPTIDE OF DANIO RERIO STIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: CPAP; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: TCP-10 DOMAIN, RESIDUES 937-1124; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SCL-INTERRUPTING LOCUS PROTEIN HOMOLOG; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: STIL PEPTIDE, RESIDUES 408-428; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET28; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 13 ORGANISM_COMMON: ZEBRAFISH; SOURCE 14 ORGANISM_TAXID: 7955; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VARIANT: C41 KEYWDS CELL CYCLE, CENTRIOLE DUPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR M.VAN BREUGEL REVDAT 4 20-DEC-23 4BXR 1 REMARK REVDAT 3 17-JAN-18 4BXR 1 JRNL REVDAT 2 02-OCT-13 4BXR 1 JRNL REVDAT 1 25-SEP-13 4BXR 0 JRNL AUTH M.A.COTTEE,N.MUSCHALIK,Y.L.WONG,C.M.JOHNSON,S.JOHNSON, JRNL AUTH 2 A.ANDREEVA,K.OEGEMA,S.M.LEA,J.W.RAFF,M.VAN BREUGEL JRNL TITL CRYSTAL STRUCTURES OF THE CPAP/STIL COMPLEX REVEAL ITS ROLE JRNL TITL 2 IN CENTRIOLE ASSEMBLY AND HUMAN MICROCEPHALY. JRNL REF ELIFE V. 2 01071 2013 JRNL REFN ESSN 2050-084X JRNL PMID 24052813 JRNL DOI 10.7554/ELIFE.01071 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1145 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1607 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3115 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.66000 REMARK 3 B22 (A**2) : -2.75000 REMARK 3 B33 (A**2) : 1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.74000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.308 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.236 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.224 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.205 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3195 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3002 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4329 ; 1.619 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6954 ; 1.149 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 388 ; 6.613 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;34.435 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 553 ;15.434 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.937 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 465 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3620 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 712 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 641 ; 0.238 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2755 ; 0.207 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1535 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1943 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 99 ; 0.194 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.261 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.219 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 90 ; 0.225 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.215 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3195 ; 5.311 ; 5.935 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3002 ; 1.418 ; 6.078 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4329 ; 7.864 ; 8.812 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 944 1122 B 944 1122 9240 0.17 0.05 REMARK 3 2 C 414 424 D 414 424 373 0.13 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALY REMARK 4 REMARK 4 4BXR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1290057686. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PIXEL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23051 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 56.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 1.01000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4BXP (DISTORTED) REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 8.5, 200 MM CA ACETATE, REMARK 280 17% PEG-2000 MME REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.73500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 933 REMARK 465 PRO A 934 REMARK 465 HIS A 935 REMARK 465 MET A 936 REMARK 465 GLU A 937 REMARK 465 GLU A 938 REMARK 465 ILE A 939 REMARK 465 MET A 940 REMARK 465 ALA A 1124 REMARK 465 GLY B 933 REMARK 465 PRO B 934 REMARK 465 HIS B 935 REMARK 465 MET B 936 REMARK 465 GLU B 937 REMARK 465 GLU B 938 REMARK 465 ILE B 939 REMARK 465 MET B 940 REMARK 465 GLN B 941 REMARK 465 SER B 942 REMARK 465 ASP B 943 REMARK 465 GLY C 407 REMARK 465 SER C 408 REMARK 465 GLY C 409 REMARK 465 VAL C 410 REMARK 465 GLU C 411 REMARK 465 ASP C 412 REMARK 465 GLU C 413 REMARK 465 VAL C 426 REMARK 465 SER C 427 REMARK 465 GLN C 428 REMARK 465 GLU C 429 REMARK 465 ASN C 430 REMARK 465 LEU C 431 REMARK 465 TYR C 432 REMARK 465 PHE C 433 REMARK 465 GLN C 434 REMARK 465 GLY D 407 REMARK 465 SER D 408 REMARK 465 GLY D 409 REMARK 465 VAL D 410 REMARK 465 GLU D 411 REMARK 465 ASP D 412 REMARK 465 GLU D 413 REMARK 465 GLN D 428 REMARK 465 GLU D 429 REMARK 465 ASN D 430 REMARK 465 LEU D 431 REMARK 465 TYR D 432 REMARK 465 PHE D 433 REMARK 465 GLN D 434 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 1035 OG1 THR B 1037 2.07 REMARK 500 OG1 THR A 1106 O HOH A 2028 2.16 REMARK 500 O HIS A 1023 O HOH A 2012 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 990 -4.95 91.14 REMARK 500 ASP A1035 13.74 -68.85 REMARK 500 THR A1071 -8.25 -58.24 REMARK 500 THR A1122 30.92 -74.88 REMARK 500 ASP B 989 9.12 -67.45 REMARK 500 ASP B1035 14.39 -69.41 REMARK 500 THR B1071 -8.73 -57.53 REMARK 500 LEU C 415 -16.21 79.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO D 425 VAL D 426 -149.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BXP RELATED DB: PDB REMARK 900 STRUCTURE OF THE WILD-TYPE TCP10 DOMAIN OF DANIO RERIO CPAP REMARK 900 RELATED ID: 4BXQ RELATED DB: PDB REMARK 900 STRUCTURE OF THE E1021V MUTANT OF THE TCP10 DOMAIN OF DANIO RERIO REMARK 900 CPAP DBREF 4BXR A 937 1124 UNP E7FCY1 E7FCY1_DANRE 937 1124 DBREF 4BXR B 937 1124 UNP E7FCY1 E7FCY1_DANRE 937 1124 DBREF 4BXR C 408 428 UNP Q8JGS1 STIL_DANRE 408 428 DBREF 4BXR D 408 428 UNP Q8JGS1 STIL_DANRE 408 428 SEQADV 4BXR GLY A 933 UNP E7FCY1 EXPRESSION TAG SEQADV 4BXR PRO A 934 UNP E7FCY1 EXPRESSION TAG SEQADV 4BXR HIS A 935 UNP E7FCY1 EXPRESSION TAG SEQADV 4BXR MET A 936 UNP E7FCY1 EXPRESSION TAG SEQADV 4BXR GLY B 933 UNP E7FCY1 EXPRESSION TAG SEQADV 4BXR PRO B 934 UNP E7FCY1 EXPRESSION TAG SEQADV 4BXR HIS B 935 UNP E7FCY1 EXPRESSION TAG SEQADV 4BXR MET B 936 UNP E7FCY1 EXPRESSION TAG SEQADV 4BXR GLY C 407 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR GLU C 429 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR ASN C 430 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR LEU C 431 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR TYR C 432 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR PHE C 433 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR GLN C 434 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR GLY D 407 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR GLU D 429 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR ASN D 430 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR LEU D 431 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR TYR D 432 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR PHE D 433 UNP Q8JGS1 EXPRESSION TAG SEQADV 4BXR GLN D 434 UNP Q8JGS1 EXPRESSION TAG SEQRES 1 A 192 GLY PRO HIS MET GLU GLU ILE MET GLN SER ASP SER LYS SEQRES 2 A 192 ILE GLU LYS MET LEU PRO ASP GLY GLY ARG LEU VAL VAL SEQRES 3 A 192 PHE PRO ASN GLY THR ARG LYS GLU LEU SER ALA ASP GLY SEQRES 4 A 192 GLN THR VAL LYS VAL MET PHE PHE ASN GLY ASP VAL LYS SEQRES 5 A 192 HIS THR MET PRO ASP GLN ARG VAL ILE TYR TYR TYR ALA SEQRES 6 A 192 GLU ALA GLN THR THR HIS ILE THR TYR PRO ASP GLY MET SEQRES 7 A 192 GLU VAL LEU GLN PHE PRO ASN ASN GLN THR GLU LYS HIS SEQRES 8 A 192 PHE PRO ASP GLY ARG LYS GLU ILE THR PHE PRO ASP GLN SEQRES 9 A 192 THR VAL LYS THR LEU HIS PRO ASP GLY ARG GLU GLU SER SEQRES 10 A 192 VAL LEU THR ASP GLY THR ILE ILE GLN LEU ASN PRO ASP SEQRES 11 A 192 GLY SER LYS VAL ILE GLN PHE ASN THR GLY GLN ARG GLU SEQRES 12 A 192 ILE HIS THR ALA ASP PHE LYS ARG ARG GLU TYR PRO ASP SEQRES 13 A 192 GLY THR VAL LYS THR VAL TYR SER ASP GLY ARG GLN GLU SEQRES 14 A 192 THR GLN TYR PRO THR GLY ARG VAL ARG LEU LYS ASP PRO SEQRES 15 A 192 GLN GLY LYS VAL ILE MET ASP THR LYS ALA SEQRES 1 B 192 GLY PRO HIS MET GLU GLU ILE MET GLN SER ASP SER LYS SEQRES 2 B 192 ILE GLU LYS MET LEU PRO ASP GLY GLY ARG LEU VAL VAL SEQRES 3 B 192 PHE PRO ASN GLY THR ARG LYS GLU LEU SER ALA ASP GLY SEQRES 4 B 192 GLN THR VAL LYS VAL MET PHE PHE ASN GLY ASP VAL LYS SEQRES 5 B 192 HIS THR MET PRO ASP GLN ARG VAL ILE TYR TYR TYR ALA SEQRES 6 B 192 GLU ALA GLN THR THR HIS ILE THR TYR PRO ASP GLY MET SEQRES 7 B 192 GLU VAL LEU GLN PHE PRO ASN ASN GLN THR GLU LYS HIS SEQRES 8 B 192 PHE PRO ASP GLY ARG LYS GLU ILE THR PHE PRO ASP GLN SEQRES 9 B 192 THR VAL LYS THR LEU HIS PRO ASP GLY ARG GLU GLU SER SEQRES 10 B 192 VAL LEU THR ASP GLY THR ILE ILE GLN LEU ASN PRO ASP SEQRES 11 B 192 GLY SER LYS VAL ILE GLN PHE ASN THR GLY GLN ARG GLU SEQRES 12 B 192 ILE HIS THR ALA ASP PHE LYS ARG ARG GLU TYR PRO ASP SEQRES 13 B 192 GLY THR VAL LYS THR VAL TYR SER ASP GLY ARG GLN GLU SEQRES 14 B 192 THR GLN TYR PRO THR GLY ARG VAL ARG LEU LYS ASP PRO SEQRES 15 B 192 GLN GLY LYS VAL ILE MET ASP THR LYS ALA SEQRES 1 C 28 GLY SER GLY VAL GLU ASP GLU ASP LEU SER PRO ARG PRO SEQRES 2 C 28 SER PRO ASN PRO HIS PRO VAL SER GLN GLU ASN LEU TYR SEQRES 3 C 28 PHE GLN SEQRES 1 D 28 GLY SER GLY VAL GLU ASP GLU ASP LEU SER PRO ARG PRO SEQRES 2 D 28 SER PRO ASN PRO HIS PRO VAL SER GLN GLU ASN LEU TYR SEQRES 3 D 28 PHE GLN FORMUL 5 HOH *54(H2 O) SHEET 1 AA20 ILE A 946 MET A 949 0 SHEET 2 AA20 ARG A 955 VAL A 958 -1 O LEU A 956 N LYS A 948 SHEET 3 AA20 ARG A 964 LEU A 967 -1 O LYS A 965 N VAL A 957 SHEET 4 AA20 VAL A 974 MET A 977 -1 O LYS A 975 N GLU A 966 SHEET 5 AA20 VAL A 983 THR A 986 -1 O LYS A 984 N VAL A 976 SHEET 6 AA20 VAL A 992 TYR A 996 -1 O ILE A 993 N HIS A 985 SHEET 7 AA20 THR A1001 THR A1005 -1 O THR A1001 N TYR A 996 SHEET 8 AA20 GLU A1011 GLN A1014 -1 O VAL A1012 N ILE A1004 SHEET 9 AA20 THR A1020 HIS A1023 -1 O GLU A1021 N LEU A1013 SHEET 10 AA20 LYS A1029 THR A1032 -1 O GLU A1030 N LYS A1022 SHEET 11 AA20 VAL A1038 LEU A1041 -1 O LYS A1039 N ILE A1031 SHEET 12 AA20 GLU A1047 VAL A1050 -1 O GLU A1048 N THR A1040 SHEET 13 AA20 ILE A1056 LEU A1059 -1 O ILE A1057 N SER A1049 SHEET 14 AA20 LYS A1065 GLN A1068 -1 O VAL A1066 N GLN A1058 SHEET 15 AA20 ARG A1074 HIS A1077 -1 O GLU A1075 N ILE A1067 SHEET 16 AA20 PHE A1081 GLU A1085 -1 O ARG A1083 N ILE A1076 SHEET 17 AA20 VAL A1091 TYR A1095 -1 O LYS A1092 N ARG A1084 SHEET 18 AA20 GLN A1100 GLN A1103 -1 O GLU A1101 N THR A1093 SHEET 19 AA20 VAL A1109 LYS A1112 -1 O ARG A1110 N THR A1102 SHEET 20 AA20 VAL A1118 ASP A1121 -1 N ILE A1119 O LEU A1111 SHEET 1 BA20 ILE B 946 MET B 949 0 SHEET 2 BA20 ARG B 955 VAL B 958 -1 O LEU B 956 N LYS B 948 SHEET 3 BA20 ARG B 964 LEU B 967 -1 O LYS B 965 N VAL B 957 SHEET 4 BA20 VAL B 974 MET B 977 -1 O LYS B 975 N GLU B 966 SHEET 5 BA20 VAL B 983 THR B 986 -1 O LYS B 984 N VAL B 976 SHEET 6 BA20 VAL B 992 TYR B 996 -1 O ILE B 993 N HIS B 985 SHEET 7 BA20 THR B1001 THR B1005 -1 O THR B1001 N TYR B 996 SHEET 8 BA20 GLU B1011 GLN B1014 -1 O VAL B1012 N ILE B1004 SHEET 9 BA20 THR B1020 HIS B1023 -1 O GLU B1021 N LEU B1013 SHEET 10 BA20 LYS B1029 THR B1032 -1 O GLU B1030 N LYS B1022 SHEET 11 BA20 VAL B1038 LEU B1041 -1 O LYS B1039 N ILE B1031 SHEET 12 BA20 GLU B1047 VAL B1050 -1 O GLU B1048 N THR B1040 SHEET 13 BA20 ILE B1056 LEU B1059 -1 O ILE B1057 N SER B1049 SHEET 14 BA20 LYS B1065 GLN B1068 -1 O VAL B1066 N GLN B1058 SHEET 15 BA20 ARG B1074 HIS B1077 -1 O GLU B1075 N ILE B1067 SHEET 16 BA20 PHE B1081 GLU B1085 -1 O ARG B1083 N ILE B1076 SHEET 17 BA20 VAL B1091 TYR B1095 -1 O LYS B1092 N ARG B1084 SHEET 18 BA20 GLN B1100 GLN B1103 -1 O GLU B1101 N THR B1093 SHEET 19 BA20 ARG B1108 LYS B1112 -1 O ARG B1110 N THR B1102 SHEET 20 BA20 VAL B1118 LYS B1123 -1 N ILE B1119 O LEU B1111 CRYST1 60.250 67.470 61.650 90.00 113.92 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016598 0.000000 0.007362 0.00000 SCALE2 0.000000 0.014821 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017745 0.00000 MTRIX1 1 -0.830400 0.538500 -0.143300 -74.87000 1 MTRIX2 1 -0.160600 0.015090 0.986900 -36.59000 1 MTRIX3 1 0.533600 0.842500 0.073940 30.56000 1 MTRIX1 2 -0.804500 0.549200 -0.226400 -71.72000 1 MTRIX2 2 -0.209100 0.094930 0.973300 -37.82000 1 MTRIX3 2 0.556000 0.830300 0.038440 31.52000 1