HEADER MOTOR PROTEIN 22-JUL-13 4BYZ TITLE STRUCTURAL CHARACTERIZATION USING SULFUR-SAD OF THE CYTOPLASMIC DOMAIN TITLE 2 OF BURKHOLDERIA PSEUDOMALLEI PILO2BP, AN ACTIN-LIKE PROTEIN COMPONENT TITLE 3 OF A TYPE IVB R64-DERIVATIVE PILUS MACHINERY. CAVEAT 4BYZ GLN A 20 CHECK SIDE CONFORMATION ATOM NE2 CLOSE TO K A1198 CAVEAT 2 4BYZ DISTANCE 3.07 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE IV PILUS BIOSYNTHESIS PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-192; COMPND 5 SYNONYM: N-PILO2BP; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 272560; SOURCE 4 STRAIN: K96243; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET151/TOPO KEYWDS MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.LASSAUX,B.A.MANJASETTY,O.CONCHILLO-SOLE,D.YERO,L.GOURLAY, AUTHOR 2 L.PERLETTI,X.DAURA,H.BELRHALI,M.BOLOGNESI REVDAT 2 08-MAY-24 4BYZ 1 REMARK LINK REVDAT 1 23-APR-14 4BYZ 0 JRNL AUTH P.LASSAUX,O.CONCHILLO-SOLE,B.A.MANJASETTY,D.YERO,L.PERLETTI, JRNL AUTH 2 H.BELRHALI,X.DAURA,L.J.GOURLAY,M.BOLOGNESI JRNL TITL REDEFINING THE PF06864 PFAM FAMILY BASED ON BURKHOLDERIA JRNL TITL 2 PSEUDOMALLEI PILO2BP S-SAD CRYSTAL STRUCTURE. JRNL REF PLOS ONE V. 9 94981 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24728008 JRNL DOI 10.1371/JOURNAL.PONE.0094981 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 26448 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1438 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1913 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1560 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 189 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.54000 REMARK 3 B22 (A**2) : -0.54000 REMARK 3 B33 (A**2) : 1.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.051 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.150 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1666 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1605 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2258 ; 1.372 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3646 ; 0.762 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 195 ; 5.760 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;30.762 ;21.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 279 ;14.219 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;16.387 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 230 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1896 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 452 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3270 ; 2.831 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 41 ;31.119 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3383 ;11.143 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 16 REMARK 3 RESIDUE RANGE : A 17 A 83 REMARK 3 RESIDUE RANGE : A 84 A 95 REMARK 3 RESIDUE RANGE : A 96 A 164 REMARK 3 RESIDUE RANGE : A 165 A 192 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9900 1.8330 46.6070 REMARK 3 T TENSOR REMARK 3 T11: 0.0099 T22: 0.0106 REMARK 3 T33: 0.0001 T12: 0.0003 REMARK 3 T13: 0.0001 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.0091 L22: 0.0190 REMARK 3 L33: 0.0094 L12: 0.0115 REMARK 3 L13: -0.0010 L23: 0.0050 REMARK 3 S TENSOR REMARK 3 S11: -0.0001 S12: -0.0013 S13: 0.0001 REMARK 3 S21: -0.0008 S22: 0.0004 S23: -0.0002 REMARK 3 S31: 0.0001 S32: 0.0013 S33: -0.0002 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4BYZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1290057312. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27940 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : 0.68000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3 M SODIUM POTASSIUM PHOSPHATE PH REMARK 280 7.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.50000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.02100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.02100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.25000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.02100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.02100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.75000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.02100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.02100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.25000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.02100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.02100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.75000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.50000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 37 CD CE NZ REMARK 470 ARG A 154 CZ REMARK 470 ARG A 190 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2033 O HOH A 2074 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 97 CB - CA - C ANGL. DEV. = -15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1197 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 14 O REMARK 620 2 SER A 70 OG 111.4 REMARK 620 3 GLY A 72 N 99.4 74.8 REMARK 620 4 ASP A 122 OD1 98.2 148.9 91.9 REMARK 620 5 ASP A 122 OD2 130.8 116.2 104.3 39.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1194 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 19 O REMARK 620 2 GLN A 20 OE1 106.8 REMARK 620 3 K A1198 K 132.6 106.2 REMARK 620 4 HOH A2045 O 92.3 95.2 117.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1198 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 21 O REMARK 620 2 HOH A2070 O 123.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1196 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 23 O REMARK 620 2 ASN A 120 N 124.9 REMARK 620 3 HOH A2137 O 117.9 116.2 REMARK 620 4 HOH A2152 O 56.6 149.5 65.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1195 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 47 NH2 REMARK 620 2 SER A 76 OG 65.8 REMARK 620 3 HIS A 115 O 125.5 93.5 REMARK 620 4 HOH A2084 O 77.9 142.9 101.5 REMARK 620 5 HOH A2097 O 115.2 76.5 106.8 129.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1194 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1198 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BZ0 RELATED DB: PDB REMARK 900 STRUCTURAL CHARACTERIZATION USING SULFUR-SAD OF THE CYTOPLASMIC REMARK 900 DOMAIN OF BURKHOLDERIA PSEUDOMALLEI PILO2BP, AN ACTIN-LIKE PROTEIN REMARK 900 COMPONENT OF A TYPE IVB R64- DERIVATIVE PILUS MACHINERY. REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FIRST TWO AMINO ACID PRESENT IN THE STRUCTURE REMAIN REMARK 999 FROM THE PLASMID AFTER CUTTING OF THE TAG. DBREF 4BYZ A 1 192 UNP Q63JW5 Q63JW5_BURPS 1 192 SEQADV 4BYZ TYR A -1 UNP Q63JW5 EXPRESSION TAG SEQADV 4BYZ THR A 0 UNP Q63JW5 EXPRESSION TAG SEQRES 1 A 194 TYR THR MET SER ALA GLN VAL ILE GLN ILE GLY ARG GLN SEQRES 2 A 194 ARG PHE VAL GLY GLY LEU PHE TRP GLN SER LEU SER ARG SEQRES 3 A 194 ARG ASN GLU LEU ARG ALA GLU ALA VAL GLU LEU ALA LYS SEQRES 4 A 194 LYS LEU LYS PHE ASP LEU MET VAL LEU ARG ILE ASP ARG SEQRES 5 A 194 GLY VAL ALA ALA ALA GLY TYR ALA ASN THR ARG ASP GLY SEQRES 6 A 194 PHE ALA PRO GLY HIS LEU SER LEU GLY ALA MET VAL SER SEQRES 7 A 194 ARG ALA ILE ALA LEU GLU GLY ALA PHE TYR ASN GLY ARG SEQRES 8 A 194 ARG GLN PRO ALA PRO ASN TRP LEU GLY ALA PHE ALA LEU SEQRES 9 A 194 PRO ASP GLY ARG TRP ALA TYR PHE ALA VAL ARG ASP HIS SEQRES 10 A 194 ALA PHE MET PRO ASN GLY ASP TRP VAL GLY SER ARG GLU SEQRES 11 A 194 GLU ALA LEU GLU ARG LEU HIS THR ASP TYR ALA TRP GLY SEQRES 12 A 194 GLY TRP ASN VAL VAL ILE GLY GLU PRO GLU LEU GLU ARG SEQRES 13 A 194 GLN GLY PHE GLN ASN PHE GLN PRO LYS ARG LEU ASP ASP SEQRES 14 A 194 LEU LEU PRO ARG ARG GLY GLY ARG PRO ARG THR GLU ARG SEQRES 15 A 194 TRP TRP ALA LEU ARG PRO VAL GLU ARG ARG LEU SER HET PO4 A1193 5 HET K A1194 1 HET K A1195 1 HET K A1196 1 HET K A1197 1 HET K A1198 1 HETNAM PO4 PHOSPHATE ION HETNAM K POTASSIUM ION FORMUL 2 PO4 O4 P 3- FORMUL 3 K 5(K 1+) FORMUL 8 HOH *189(H2 O) HELIX 1 1 GLU A 27 LYS A 40 1 14 HELIX 2 2 ASN A 59 GLY A 63 5 5 HELIX 3 3 LEU A 71 GLY A 83 1 13 HELIX 4 4 SER A 126 ALA A 139 1 14 HELIX 5 5 GLU A 149 GLY A 156 5 8 HELIX 6 6 ARG A 164 LEU A 169 1 6 HELIX 7 7 GLU A 179 TRP A 182 5 4 SHEET 1 AA 3 ILE A 6 ILE A 8 0 SHEET 2 AA 3 GLN A 11 VAL A 14 -1 O GLN A 11 N ILE A 8 SHEET 3 AA 3 LEU A 69 SER A 70 1 O LEU A 69 N VAL A 14 SHEET 1 AB 4 PHE A 18 SER A 21 0 SHEET 2 AB 4 VAL A 52 ALA A 58 -1 O ALA A 55 N GLN A 20 SHEET 3 AB 4 LEU A 43 ASP A 49 -1 O LEU A 43 N ALA A 58 SHEET 4 AB 4 ARG A 185 PRO A 186 -1 O ARG A 185 N MET A 44 SHEET 1 AC 2 ALA A 84 TYR A 86 0 SHEET 2 AC 2 ARG A 89 GLN A 91 -1 O ARG A 89 N TYR A 86 SHEET 1 AD 5 ALA A 116 GLY A 125 0 SHEET 2 AD 5 TRP A 107 ARG A 113 -1 O TRP A 107 N GLY A 125 SHEET 3 AD 5 TRP A 96 ALA A 101 -1 O TRP A 96 N VAL A 112 SHEET 4 AD 5 VAL A 145 GLY A 148 1 O VAL A 145 N LEU A 97 SHEET 5 AD 5 PHE A 160 PRO A 162 1 O GLN A 161 N GLY A 148 SHEET 1 AE 2 ARG A 171 ARG A 172 0 SHEET 2 AE 2 ARG A 175 PRO A 176 -1 O ARG A 175 N ARG A 172 LINK O VAL A 14 K K A1197 1555 1555 2.91 LINK O TRP A 19 K K A1194 1555 1555 2.75 LINK OE1 GLN A 20 K K A1194 1555 1555 2.75 LINK O SER A 21 K K A1198 1555 1555 2.69 LINK O SER A 23 K K A1196 1555 1555 2.71 LINK NH2 ARG A 47 K K A1195 1555 1555 3.07 LINK OG SER A 70 K K A1197 1555 1555 2.76 LINK N GLY A 72 K K A1197 1555 1555 2.99 LINK OG SER A 76 K K A1195 1555 1555 3.12 LINK O HIS A 115 K K A1195 1555 1555 2.76 LINK N ASN A 120 K K A1196 7556 1555 3.04 LINK OD1 ASP A 122 K K A1197 1555 1555 3.47 LINK OD2 ASP A 122 K K A1197 1555 1555 2.64 LINK K K A1194 K K A1198 1555 7556 2.81 LINK K K A1194 O HOH A2045 1555 1555 2.75 LINK K K A1195 O HOH A2084 1555 1555 2.92 LINK K K A1195 O HOH A2097 1555 1555 2.80 LINK K K A1196 O HOH A2137 1555 7556 2.54 LINK K K A1196 O HOH A2152 1555 7556 3.48 LINK K K A1198 O HOH A2070 1555 1555 2.80 SITE 1 AC1 9 ASP A 42 ASP A 49 ARG A 50 ARG A 61 SITE 2 AC1 9 ARG A 77 ARG A 189 HOH A2083 HOH A2183 SITE 3 AC1 9 HOH A2189 SITE 1 AC2 6 PHE A 18 TRP A 19 GLN A 20 PRO A 119 SITE 2 AC2 6 K A1198 HOH A2045 SITE 1 AC3 5 ARG A 47 SER A 76 HIS A 115 HOH A2084 SITE 2 AC3 5 HOH A2097 SITE 1 AC4 4 SER A 23 MET A 118 ASN A 120 HOH A2137 SITE 1 AC5 5 VAL A 14 SER A 70 LEU A 71 GLY A 72 SITE 2 AC5 5 ASP A 122 SITE 1 AC6 6 PHE A 18 GLN A 20 SER A 21 PRO A 119 SITE 2 AC6 6 K A1194 HOH A2070 CRYST1 56.042 56.042 117.000 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017844 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017844 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008547 0.00000