HEADER MOTOR PROTEIN 22-JUL-13 4BZ0 TITLE STRUCTURAL CHARACTERIZATION USING SULFUR-SAD OF THE CYTOPLASMIC DOMAIN TITLE 2 OF BURKHOLDERIA PSEUDOMALLEI PILO2BP, AN ACTIN-LIKE PROTEIN COMPONENT TITLE 3 OF A TYPE IVB R64-DERIVATIVE PILUS MACHINERY. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE TYPE IV PILUS BIOSYNTHESIS PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PILIN ACCESSORY PROTEIN, RESIDUES 1-192; COMPND 5 SYNONYM: N-PILO2BP; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 272560; SOURCE 4 STRAIN: K96243; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET151/TOPO KEYWDS MOTOR PROTEIN, SULFUR-SAD, TYPE IVB BIOGENESIS PILUS, PFAM FAMILY KEYWDS 2 PF06864. EXPDTA X-RAY DIFFRACTION AUTHOR P.LASSAUX,B.A.MANJASETTY,O.CONCHILLO-SOLE,D.YERO,L.GOURLAY, AUTHOR 2 L.PERLETTI,X.DAURA,H.BELRHALI,M.BOLOGNESI REVDAT 2 20-DEC-23 4BZ0 1 REMARK LINK REVDAT 1 23-APR-14 4BZ0 0 JRNL AUTH P.LASSAUX,O.CONCHILLO-SOLE,B.A.MANJASETTY,D.YERO,L.PERLETTI, JRNL AUTH 2 H.BELRHALI,X.DAURA,L.J.GOURLAY,M.BOLOGNESI JRNL TITL REDEFINING THE PF06864 PFAM FAMILY BASED ON BURKHOLDERIA JRNL TITL 2 PSEUDOMALLEI PILO2BP S-SAD CRYSTAL STRUCTURE. JRNL REF PLOS ONE V. 9 94981 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24728008 JRNL DOI 10.1371/JOURNAL.PONE.0094981 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.6 REMARK 3 NUMBER OF REFLECTIONS : 15597 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 851 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1228 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1418 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.08000 REMARK 3 B22 (A**2) : 1.08000 REMARK 3 B33 (A**2) : -2.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.401 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.134 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.241 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1557 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1481 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2118 ; 1.373 ; 1.930 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3374 ; 1.170 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 190 ; 6.050 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;32.738 ;22.022 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 256 ;18.540 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;20.274 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 210 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1828 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 429 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3038 ; 5.053 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 24 ;21.027 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3050 ; 9.554 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4BZ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1290057777. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.06890 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16362 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 42.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.0 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.22000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4BYZ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.9 M SODIUM POTASSIUM PHOSPHATE PH REMARK 280 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.51000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.37000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.37000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.75500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.37000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.37000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 95.26500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.37000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.37000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.75500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.37000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.37000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 95.26500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 63.51000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 170 REMARK 465 ARG A 171 REMARK 465 ARG A 172 REMARK 465 GLY A 173 REMARK 465 GLY A 174 REMARK 465 ARG A 175 REMARK 465 PRO A 176 REMARK 465 ARG A 177 REMARK 465 GLU A 188 REMARK 465 ARG A 189 REMARK 465 ARG A 190 REMARK 465 LEU A 191 REMARK 465 SER A 192 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 178 CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 40 57.65 72.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1191 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 14 O REMARK 620 2 SER A 70 OG 111.2 REMARK 620 3 GLY A 72 N 95.1 74.0 REMARK 620 4 ASP A 122 OD2 130.8 117.0 106.5 REMARK 620 5 ASP A 122 OD1 98.7 145.6 87.1 41.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1188 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 19 O REMARK 620 2 GLN A 20 OE1 107.6 REMARK 620 3 K A1190 K 138.4 105.0 REMARK 620 4 K A1193 K 87.0 93.2 116.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1189 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 23 O REMARK 620 2 ASN A 120 N 128.5 REMARK 620 3 HOH A2053 O 114.6 116.6 REMARK 620 4 HOH A2064 O 53.7 145.6 70.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1194 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 24 NH1 REMARK 620 2 ARG A 50 O 106.3 REMARK 620 3 ARG A 113 NH2 123.4 120.2 REMARK 620 4 GLY A 141 O 123.1 99.3 80.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1192 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1194 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BYZ RELATED DB: PDB REMARK 900 STRUCTURAL CHARACTERIZATION USING SULFUR-SAD OF THE CYTOPLASMIC REMARK 900 DOMAIN OF BURKHOLDERIA PSEUDOMALLEI PILO2BP, AN ACTIN-LIKE PROTEIN REMARK 900 COMPONENT OF A TYPE IVB R64- DERIVATIVE PILUS MACHINERY. DBREF 4BZ0 A 1 192 UNP Q63JW5 Q63JW5_BURPS 1 192 SEQRES 1 A 192 MET SER ALA GLN VAL ILE GLN ILE GLY ARG GLN ARG PHE SEQRES 2 A 192 VAL GLY GLY LEU PHE TRP GLN SER LEU SER ARG ARG ASN SEQRES 3 A 192 GLU LEU ARG ALA GLU ALA VAL GLU LEU ALA LYS LYS LEU SEQRES 4 A 192 LYS PHE ASP LEU MET VAL LEU ARG ILE ASP ARG GLY VAL SEQRES 5 A 192 ALA ALA ALA GLY TYR ALA ASN THR ARG ASP GLY PHE ALA SEQRES 6 A 192 PRO GLY HIS LEU SER LEU GLY ALA MET VAL SER ARG ALA SEQRES 7 A 192 ILE ALA LEU GLU GLY ALA PHE TYR ASN GLY ARG ARG GLN SEQRES 8 A 192 PRO ALA PRO ASN TRP LEU GLY ALA PHE ALA LEU PRO ASP SEQRES 9 A 192 GLY ARG TRP ALA TYR PHE ALA VAL ARG ASP HIS ALA PHE SEQRES 10 A 192 MET PRO ASN GLY ASP TRP VAL GLY SER ARG GLU GLU ALA SEQRES 11 A 192 LEU GLU ARG LEU HIS THR ASP TYR ALA TRP GLY GLY TRP SEQRES 12 A 192 ASN VAL VAL ILE GLY GLU PRO GLU LEU GLU ARG GLN GLY SEQRES 13 A 192 PHE GLN ASN PHE GLN PRO LYS ARG LEU ASP ASP LEU LEU SEQRES 14 A 192 PRO ARG ARG GLY GLY ARG PRO ARG THR GLU ARG TRP TRP SEQRES 15 A 192 ALA LEU ARG PRO VAL GLU ARG ARG LEU SER HET K A1188 1 HET K A1189 1 HET K A1190 1 HET K A1191 1 HET K A1192 1 HET K A1193 1 HET K A1194 1 HETNAM K POTASSIUM ION FORMUL 2 K 7(K 1+) FORMUL 9 HOH *75(H2 O) HELIX 1 1 GLU A 27 LYS A 40 1 14 HELIX 2 2 ASN A 59 GLY A 63 5 5 HELIX 3 3 LEU A 71 GLY A 83 1 13 HELIX 4 4 SER A 126 ALA A 139 1 14 HELIX 5 5 GLU A 149 GLY A 156 5 8 HELIX 6 6 ARG A 164 LEU A 168 5 5 HELIX 7 7 GLU A 179 TRP A 182 5 4 SHEET 1 AA 3 ILE A 6 ILE A 8 0 SHEET 2 AA 3 GLN A 11 VAL A 14 -1 O GLN A 11 N ILE A 8 SHEET 3 AA 3 LEU A 69 SER A 70 1 O LEU A 69 N VAL A 14 SHEET 1 AB 4 PHE A 18 SER A 21 0 SHEET 2 AB 4 VAL A 52 ALA A 58 -1 O ALA A 55 N GLN A 20 SHEET 3 AB 4 LEU A 43 ASP A 49 -1 O LEU A 43 N ALA A 58 SHEET 4 AB 4 ARG A 185 PRO A 186 -1 O ARG A 185 N MET A 44 SHEET 1 AC 2 ALA A 84 TYR A 86 0 SHEET 2 AC 2 ARG A 89 GLN A 91 -1 O ARG A 89 N TYR A 86 SHEET 1 AD 5 ALA A 116 GLY A 125 0 SHEET 2 AD 5 TRP A 107 ARG A 113 -1 O TRP A 107 N GLY A 125 SHEET 3 AD 5 TRP A 96 ALA A 101 -1 O TRP A 96 N VAL A 112 SHEET 4 AD 5 VAL A 145 GLY A 148 1 O VAL A 145 N LEU A 97 SHEET 5 AD 5 PHE A 160 PRO A 162 1 O GLN A 161 N GLY A 148 LINK O VAL A 14 K K A1191 1555 1555 2.91 LINK O TRP A 19 K K A1188 1555 1555 2.75 LINK OE1 GLN A 20 K K A1188 1555 1555 2.72 LINK O SER A 23 K K A1189 8777 1555 2.57 LINK NH1 ARG A 24 K K A1194 8777 1555 3.09 LINK OE2 GLU A 31 K K A1192 8777 1555 2.53 LINK O ARG A 50 K K A1194 8777 1555 3.11 LINK OG SER A 70 K K A1191 1555 1555 2.75 LINK N GLY A 72 K K A1191 1555 1555 3.16 LINK NH2 ARG A 113 K K A1194 1555 1555 3.17 LINK N ASN A 120 K K A1189 1555 1555 3.16 LINK OD2 ASP A 122 K K A1191 1555 1555 2.51 LINK OD1 ASP A 122 K K A1191 1555 1555 3.33 LINK O GLY A 141 K K A1194 1555 1555 3.07 LINK K K A1188 K K A1190 1555 1555 2.78 LINK K K A1188 K K A1193 1555 1555 2.81 LINK K K A1189 O HOH A2053 1555 1555 2.64 LINK K K A1189 O HOH A2064 1555 1555 3.42 LINK K K A1190 K K A1192 1555 1555 2.74 LINK K K A1193 O HOH A2016 1555 1555 2.74 SITE 1 AC1 5 TRP A 19 GLN A 20 PRO A 119 K A1190 SITE 2 AC1 5 K A1193 SITE 1 AC2 4 SER A 23 MET A 118 ASN A 120 HOH A2053 SITE 1 AC3 5 GLN A 20 SER A 21 PRO A 119 K A1188 SITE 2 AC3 5 K A1192 SITE 1 AC4 5 VAL A 14 SER A 70 LEU A 71 GLY A 72 SITE 2 AC4 5 ASP A 122 SITE 1 AC5 3 PHE A 18 GLU A 31 K A1190 SITE 1 AC6 3 SER A 21 K A1188 HOH A2016 SITE 1 AC7 4 ARG A 24 ARG A 50 ARG A 113 GLY A 141 CRYST1 52.740 52.740 127.020 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018961 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018961 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007873 0.00000