data_4C1Q # _entry.id 4C1Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4C1Q pdb_00004c1q 10.2210/pdb4c1q/pdb PDBE EBI-58012 ? ? WWPDB D_1290058012 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4C1Q _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-08-13 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mathioudakis, N.' 1 'Cusack, S.' 2 'Kadlec, J.' 3 # _citation.id primary _citation.title 'Molecular Basis for the Regulation of the H3K4 Methyltransferase Activity of Prdm9.' _citation.journal_abbrev 'Cell Rep.' _citation.journal_volume 5 _citation.page_first 13 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2211-1247 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24095733 _citation.pdbx_database_id_DOI 10.1016/J.CELREP.2013.08.035 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, H.' 1 ? primary 'Mathioudakis, N.' 2 ? primary 'Diagouraga, B.' 3 ? primary 'Dong, A.' 4 ? primary 'Dombrovski, L.' 5 ? primary 'Baudat, F.' 6 ? primary 'Cusack, S.' 7 ? primary 'De Massy, B.' 8 ? primary 'Kadlec, J.' 9 ? # _cell.entry_id 4C1Q _cell.length_a 55.730 _cell.length_b 78.180 _cell.length_c 107.610 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4C1Q _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HISTONE-LYSINE N-METHYLTRANSFERASE PRDM9' 19899.029 2 2.1.1.43 ? 'SET DOMAIN, RESIDUES 198-368' ? 2 polymer syn 'HISTONE H3.1' 1253.474 1 ? ? 'N-TERMINUS, RESIDUES 2-11' 'DOUBLE METHYLATION ON LYSINE 4' 3 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 61 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;PRDM9, HYBRID STERILITY PROTEIN 1, MEIOSIS-INDUCED FACTOR CONTAINING A PR/SET DOMAIN AND ZINC-FINGER MO PR DOMAIN ZINC FINGER PROTEIN 9, PR DOMAIN-CONTAINING PROTEIN 9 ; 2 ;HISTONE H3, HISTONE H3/A, HISTONE H3/B, HISTONE H3/C, HISTON HISTONE H3/F, HISTONE H3/H, HISTONE H3/I, HISTONE H3/J, HISTONE H3/K, HISTONE H3/L ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAMSQDDDYLYCEKCQNFFIDSCPNHGPPLFVKDSMVDRGHPNHSVLSLPPGLRISPSGIPEAGLGVWNEASDLPVGLHF GPYEGQITEDEEAANSGYSWLITKGRNCYEYVDGQDESQANWMRYVNCARDDEEQNLVAFQYHRKIFYRTCRVIRPGCEL LVWYGDEYGQELGIK ; ;GAMSQDDDYLYCEKCQNFFIDSCPNHGPPLFVKDSMVDRGHPNHSVLSLPPGLRISPSGIPEAGLGVWNEASDLPVGLHF GPYEGQITEDEEAANSGYSWLITKGRNCYEYVDGQDESQANWMRYVNCARDDEEQNLVAFQYHRKIFYRTCRVIRPGCEL LVWYGDEYGQELGIK ; A,B ? 2 'polypeptide(L)' no yes 'ART(MLY)QTARKY' ARTKQTARKY C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 SER n 1 5 GLN n 1 6 ASP n 1 7 ASP n 1 8 ASP n 1 9 TYR n 1 10 LEU n 1 11 TYR n 1 12 CYS n 1 13 GLU n 1 14 LYS n 1 15 CYS n 1 16 GLN n 1 17 ASN n 1 18 PHE n 1 19 PHE n 1 20 ILE n 1 21 ASP n 1 22 SER n 1 23 CYS n 1 24 PRO n 1 25 ASN n 1 26 HIS n 1 27 GLY n 1 28 PRO n 1 29 PRO n 1 30 LEU n 1 31 PHE n 1 32 VAL n 1 33 LYS n 1 34 ASP n 1 35 SER n 1 36 MET n 1 37 VAL n 1 38 ASP n 1 39 ARG n 1 40 GLY n 1 41 HIS n 1 42 PRO n 1 43 ASN n 1 44 HIS n 1 45 SER n 1 46 VAL n 1 47 LEU n 1 48 SER n 1 49 LEU n 1 50 PRO n 1 51 PRO n 1 52 GLY n 1 53 LEU n 1 54 ARG n 1 55 ILE n 1 56 SER n 1 57 PRO n 1 58 SER n 1 59 GLY n 1 60 ILE n 1 61 PRO n 1 62 GLU n 1 63 ALA n 1 64 GLY n 1 65 LEU n 1 66 GLY n 1 67 VAL n 1 68 TRP n 1 69 ASN n 1 70 GLU n 1 71 ALA n 1 72 SER n 1 73 ASP n 1 74 LEU n 1 75 PRO n 1 76 VAL n 1 77 GLY n 1 78 LEU n 1 79 HIS n 1 80 PHE n 1 81 GLY n 1 82 PRO n 1 83 TYR n 1 84 GLU n 1 85 GLY n 1 86 GLN n 1 87 ILE n 1 88 THR n 1 89 GLU n 1 90 ASP n 1 91 GLU n 1 92 GLU n 1 93 ALA n 1 94 ALA n 1 95 ASN n 1 96 SER n 1 97 GLY n 1 98 TYR n 1 99 SER n 1 100 TRP n 1 101 LEU n 1 102 ILE n 1 103 THR n 1 104 LYS n 1 105 GLY n 1 106 ARG n 1 107 ASN n 1 108 CYS n 1 109 TYR n 1 110 GLU n 1 111 TYR n 1 112 VAL n 1 113 ASP n 1 114 GLY n 1 115 GLN n 1 116 ASP n 1 117 GLU n 1 118 SER n 1 119 GLN n 1 120 ALA n 1 121 ASN n 1 122 TRP n 1 123 MET n 1 124 ARG n 1 125 TYR n 1 126 VAL n 1 127 ASN n 1 128 CYS n 1 129 ALA n 1 130 ARG n 1 131 ASP n 1 132 ASP n 1 133 GLU n 1 134 GLU n 1 135 GLN n 1 136 ASN n 1 137 LEU n 1 138 VAL n 1 139 ALA n 1 140 PHE n 1 141 GLN n 1 142 TYR n 1 143 HIS n 1 144 ARG n 1 145 LYS n 1 146 ILE n 1 147 PHE n 1 148 TYR n 1 149 ARG n 1 150 THR n 1 151 CYS n 1 152 ARG n 1 153 VAL n 1 154 ILE n 1 155 ARG n 1 156 PRO n 1 157 GLY n 1 158 CYS n 1 159 GLU n 1 160 LEU n 1 161 LEU n 1 162 VAL n 1 163 TRP n 1 164 TYR n 1 165 GLY n 1 166 ASP n 1 167 GLU n 1 168 TYR n 1 169 GLY n 1 170 GLN n 1 171 GLU n 1 172 LEU n 1 173 GLY n 1 174 ILE n 1 175 LYS n 2 1 ALA n 2 2 ARG n 2 3 THR n 2 4 MLY n 2 5 GLN n 2 6 THR n 2 7 ALA n 2 8 ARG n 2 9 LYS n 2 10 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'HOUSE MOUSE' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'MUS MUSCULUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant STAR _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PPROEXHTB _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HOMO SAPIENS' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP PRDM9_MOUSE 1 ? ? Q96EQ9 ? 2 UNP H31_HUMAN 2 ? ? P68431 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4C1Q A 5 ? 175 ? Q96EQ9 198 ? 368 ? 198 368 2 1 4C1Q B 5 ? 175 ? Q96EQ9 198 ? 368 ? 198 368 3 2 4C1Q C 1 ? 10 ? P68431 2 ? 11 ? 1 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4C1Q GLY A 1 ? UNP Q96EQ9 ? ? 'expression tag' 194 1 1 4C1Q ALA A 2 ? UNP Q96EQ9 ? ? 'expression tag' 195 2 1 4C1Q MET A 3 ? UNP Q96EQ9 ? ? 'expression tag' 196 3 1 4C1Q SER A 4 ? UNP Q96EQ9 ? ? 'expression tag' 197 4 2 4C1Q GLY B 1 ? UNP Q96EQ9 ? ? 'expression tag' 194 5 2 4C1Q ALA B 2 ? UNP Q96EQ9 ? ? 'expression tag' 195 6 2 4C1Q MET B 3 ? UNP Q96EQ9 ? ? 'expression tag' 196 7 2 4C1Q SER B 4 ? UNP Q96EQ9 ? ? 'expression tag' 197 8 3 4C1Q TYR C 10 ? UNP P68431 SER 11 conflict 10 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4C1Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.95 _exptl_crystal.density_percent_sol 58 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M AMMONIUM SULFATE, 0.1 M BIS-TRIS PH 5.5 AND 25% W/V PEG3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2012-07-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.939 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.939 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4C1Q _reflns.observed_criterion_sigma_I 2.3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.00 _reflns.d_resolution_high 2.30 _reflns.number_obs 21499 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.3 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 99.3 _reflns_shell.Rmerge_I_obs 0.644 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.30 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4C1Q _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20355 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.54 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.55 _refine.ls_R_factor_obs 0.21031 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20806 _refine.ls_R_factor_R_free 0.25223 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1098 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.935 _refine.B_iso_mean 54.500 _refine.aniso_B[1][1] 5.71 _refine.aniso_B[2][2] -2.32 _refine.aniso_B[3][3] -3.40 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model 'PDB ENTRY 3RAY' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.274 _refine.pdbx_overall_ESU_R_Free 0.221 _refine.overall_SU_ML 0.186 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.231 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2745 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 2840 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 49.54 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.019 ? 2856 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2514 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.325 1.955 ? 3881 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.777 3.000 ? 5799 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.501 5.000 ? 339 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.529 24.258 ? 155 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.548 15.000 ? 429 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.919 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.074 0.200 ? 388 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 3305 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 696 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 2065 4.89 0.50 'tight thermal' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 2065 4.89 0.50 'tight thermal' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 1464 _refine_ls_shell.R_factor_R_work 0.297 _refine_ls_shell.percent_reflns_obs 99.17 _refine_ls_shell.R_factor_R_free 0.325 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 82 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.998392 _struct_ncs_oper.matrix[1][2] 0.034147 _struct_ncs_oper.matrix[1][3] -0.045252 _struct_ncs_oper.matrix[2][1] -0.045571 _struct_ncs_oper.matrix[2][2] 0.008640 _struct_ncs_oper.matrix[2][3] -0.998924 _struct_ncs_oper.matrix[3][1] -0.033719 _struct_ncs_oper.matrix[3][2] 0.999380 _struct_ncs_oper.matrix[3][3] 0.010182 _struct_ncs_oper.vector[1] -12.65421 _struct_ncs_oper.vector[2] -18.50190 _struct_ncs_oper.vector[3] 20.34540 # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A ASP 6 . A ILE 87 . A ASP 199 A ILE 280 1 ? 1 2 1 B ASP 6 . B ILE 87 . B ASP 199 B ILE 280 1 ? 1 1 2 A TYR 98 . A TRP 100 . A TYR 291 A TRP 293 1 ? 1 2 2 B TYR 98 . B TRP 100 . B TYR 291 B TRP 293 1 ? 1 1 3 A ASP 113 . A ARG 130 . A ASP 306 A ARG 323 1 ? 1 2 3 B ASP 113 . B ARG 130 . B ASP 306 B ARG 323 1 ? 1 1 4 A ASP 132 . A VAL 162 . A ASP 325 A VAL 355 1 ? 1 2 4 B ASP 132 . B VAL 162 . B ASP 325 B VAL 355 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 4C1Q _struct.title 'Crystal structure of the PRDM9 SET domain in complex with H3K4me2 and AdoHcy.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4C1Q _struct_keywords.pdbx_keywords TRANSFERASE/PEPTIDE _struct_keywords.text 'TRANSFERASE-PEPTIDE COMPLEX, HISTONE METHYLTRANSFERASE, SET DOMAIN H3K4ME3' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 2 ? ASP A 6 ? ALA A 195 ASP A 199 5 ? 5 HELX_P HELX_P2 2 ASN A 43 ? SER A 48 ? ASN A 236 SER A 241 1 ? 6 HELX_P HELX_P3 3 GLU A 92 ? SER A 96 ? GLU A 285 SER A 289 5 ? 5 HELX_P HELX_P4 4 ASN A 121 ? VAL A 126 ? ASN A 314 VAL A 319 5 ? 6 HELX_P HELX_P5 5 GLY A 165 ? LEU A 172 ? GLY A 358 LEU A 365 1 ? 8 HELX_P HELX_P6 6 ASN B 43 ? SER B 48 ? ASN B 236 SER B 241 1 ? 6 HELX_P HELX_P7 7 GLU B 92 ? SER B 96 ? GLU B 285 SER B 289 5 ? 5 HELX_P HELX_P8 8 ASN B 121 ? VAL B 126 ? ASN B 314 VAL B 319 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C THR 3 C ? ? ? 1_555 C MLY 4 N ? ? C THR 3 C MLY 4 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? C MLY 4 C ? ? ? 1_555 C GLN 5 N ? ? C MLY 4 C GLN 5 1_555 ? ? ? ? ? ? ? 1.334 ? ? metalc1 metalc ? ? A CYS 12 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 205 A ZN 493 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc2 metalc ? ? A CYS 15 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 208 A ZN 493 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc3 metalc ? ? A CYS 23 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 216 A ZN 493 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc4 metalc ? ? A HIS 26 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 219 A ZN 493 1_555 ? ? ? ? ? ? ? 2.471 ? ? metalc5 metalc ? ? B CYS 12 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 205 B ZN 493 1_555 ? ? ? ? ? ? ? 2.202 ? ? metalc6 metalc ? ? B CYS 15 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 208 B ZN 493 1_555 ? ? ? ? ? ? ? 2.259 ? ? metalc7 metalc ? ? B CYS 23 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 216 B ZN 493 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc8 metalc ? ? B HIS 26 ND1 ? ? ? 1_555 F ZN . ZN ? ? B HIS 219 B ZN 493 1_555 ? ? ? ? ? ? ? 2.279 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 81 A . ? GLY 274 A PRO 82 A ? PRO 275 A 1 9.47 2 GLY 81 B . ? GLY 274 B PRO 82 B ? PRO 275 B 1 10.84 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 4 ? AC ? 2 ? AD ? 4 ? AE ? 2 ? BA ? 2 ? BB ? 6 ? BC ? 2 ? BD ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? parallel AE 1 2 ? parallel BA 1 2 ? anti-parallel BB 1 2 ? parallel BB 2 3 ? anti-parallel BB 3 4 ? anti-parallel BB 4 5 ? parallel BB 5 6 ? parallel BC 1 2 ? anti-parallel BD 1 2 ? anti-parallel BD 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 10 ? CYS A 12 ? LEU A 203 CYS A 205 AA 2 ASN A 17 ? PHE A 19 ? ASN A 210 PHE A 212 AB 1 PHE A 31 ? VAL A 32 ? PHE A 224 VAL A 225 AB 2 HIS A 79 ? PHE A 80 ? HIS A 272 PHE A 273 AB 3 LYS A 145 ? THR A 150 ? LYS A 338 THR A 343 AB 4 LEU A 137 ? TYR A 142 ? LEU A 330 TYR A 335 AC 1 LEU A 53 ? PRO A 57 ? LEU A 246 PRO A 250 AC 2 LEU A 65 ? ASN A 69 ? LEU A 258 ASN A 262 AD 1 GLN A 86 ? THR A 88 ? GLN A 279 THR A 281 AD 2 TYR A 109 ? ASP A 113 ? TYR A 302 ASP A 306 AD 3 SER A 99 ? THR A 103 ? SER A 292 THR A 296 AD 4 THR C 3 ? MLY C 4 ? THR C 3 MLY C 4 AE 1 ASN A 127 ? CYS A 128 ? ASN A 320 CYS A 321 AE 2 LEU A 161 ? VAL A 162 ? LEU A 354 VAL A 355 BA 1 LEU B 10 ? CYS B 12 ? LEU B 203 CYS B 205 BA 2 ASN B 17 ? PHE B 19 ? ASN B 210 PHE B 212 BB 1 PHE B 31 ? VAL B 32 ? PHE B 224 VAL B 225 BB 2 HIS B 79 ? PHE B 80 ? HIS B 272 PHE B 273 BB 3 LYS B 145 ? THR B 150 ? LYS B 338 THR B 343 BB 4 LEU B 137 ? TYR B 142 ? LEU B 330 TYR B 335 BB 5 LEU B 161 ? TRP B 163 ? LEU B 354 TRP B 356 BB 6 ASN B 127 ? CYS B 128 ? ASN B 320 CYS B 321 BC 1 LEU B 53 ? PRO B 57 ? LEU B 246 PRO B 250 BC 2 LEU B 65 ? ASN B 69 ? LEU B 258 ASN B 262 BD 1 GLN B 86 ? THR B 88 ? GLN B 279 THR B 281 BD 2 TYR B 109 ? ASP B 113 ? TYR B 302 ASP B 306 BD 3 SER B 99 ? THR B 103 ? SER B 292 THR B 296 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N CYS A 12 ? N CYS A 205 O ASN A 17 ? O ASN A 210 AB 1 2 N VAL A 32 ? N VAL A 225 O HIS A 79 ? O HIS A 272 AB 2 3 N PHE A 80 ? N PHE A 273 O TYR A 148 ? O TYR A 341 AB 3 4 N ARG A 149 ? N ARG A 342 O VAL A 138 ? O VAL A 331 AC 1 2 N SER A 56 ? N SER A 249 O GLY A 66 ? O GLY A 259 AD 1 2 N THR A 88 ? N THR A 281 O TYR A 111 ? O TYR A 304 AD 2 3 N VAL A 112 ? N VAL A 305 O TRP A 100 ? O TRP A 293 AD 3 4 N LEU A 101 ? N LEU A 294 O MLY C 4 ? O MLY C 4 AE 1 2 O ASN A 127 ? O ASN A 320 N VAL A 162 ? N VAL A 355 BA 1 2 N CYS B 12 ? N CYS B 205 O ASN B 17 ? O ASN B 210 BB 1 2 N VAL B 32 ? N VAL B 225 O HIS B 79 ? O HIS B 272 BB 2 3 N PHE B 80 ? N PHE B 273 O TYR B 148 ? O TYR B 341 BB 3 4 N ARG B 149 ? N ARG B 342 O VAL B 138 ? O VAL B 331 BB 4 5 N LEU B 137 ? N LEU B 330 O LEU B 161 ? O LEU B 354 BB 5 6 N VAL B 162 ? N VAL B 355 O ASN B 127 ? O ASN B 320 BC 1 2 N SER B 56 ? N SER B 249 O GLY B 66 ? O GLY B 259 BD 1 2 N THR B 88 ? N THR B 281 O TYR B 111 ? O TYR B 304 BD 2 3 N VAL B 112 ? N VAL B 305 O TRP B 100 ? O TRP B 293 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SAH 394 ? 14 'BINDING SITE FOR RESIDUE SAH A 394' AC2 Software A ZN 493 ? 4 'BINDING SITE FOR RESIDUE ZN A 493' AC3 Software B ZN 493 ? 4 'BINDING SITE FOR RESIDUE ZN B 493' AC4 Software B GOL 1358 ? 5 'BINDING SITE FOR RESIDUE GOL B 1358' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 ILE A 60 ? ILE A 253 . ? 1_555 ? 2 AC1 14 ALA A 63 ? ALA A 256 . ? 1_555 ? 3 AC1 14 LEU A 65 ? LEU A 258 . ? 1_555 ? 4 AC1 14 TYR A 98 ? TYR A 291 . ? 1_555 ? 5 AC1 14 ARG A 124 ? ARG A 317 . ? 1_555 ? 6 AC1 14 ASN A 127 ? ASN A 320 . ? 1_555 ? 7 AC1 14 CYS A 128 ? CYS A 321 . ? 1_555 ? 8 AC1 14 ARG A 130 ? ARG A 323 . ? 1_555 ? 9 AC1 14 TYR A 164 ? TYR A 357 . ? 1_555 ? 10 AC1 14 TYR A 168 ? TYR A 361 . ? 1_555 ? 11 AC1 14 HOH H . ? HOH A 2024 . ? 1_555 ? 12 AC1 14 HOH H . ? HOH A 2035 . ? 1_555 ? 13 AC1 14 ARG C 2 ? ARG C 2 . ? 1_555 ? 14 AC1 14 MLY C 4 ? MLY C 4 . ? 1_555 ? 15 AC2 4 CYS A 12 ? CYS A 205 . ? 1_555 ? 16 AC2 4 CYS A 15 ? CYS A 208 . ? 1_555 ? 17 AC2 4 CYS A 23 ? CYS A 216 . ? 1_555 ? 18 AC2 4 HIS A 26 ? HIS A 219 . ? 1_555 ? 19 AC3 4 CYS B 12 ? CYS B 205 . ? 1_555 ? 20 AC3 4 CYS B 15 ? CYS B 208 . ? 1_555 ? 21 AC3 4 CYS B 23 ? CYS B 216 . ? 1_555 ? 22 AC3 4 HIS B 26 ? HIS B 219 . ? 1_555 ? 23 AC4 5 TYR B 83 ? TYR B 276 . ? 1_555 ? 24 AC4 5 GLY B 97 ? GLY B 290 . ? 1_555 ? 25 AC4 5 SER B 99 ? SER B 292 . ? 1_555 ? 26 AC4 5 TRP B 100 ? TRP B 293 . ? 1_555 ? 27 AC4 5 VAL B 126 ? VAL B 319 . ? 1_555 ? # _database_PDB_matrix.entry_id 4C1Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4C1Q _atom_sites.fract_transf_matrix[1][1] 0.017944 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012791 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009293 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 194 ? ? ? A . n A 1 2 ALA 2 195 195 ALA ALA A . n A 1 3 MET 3 196 196 MET MET A . n A 1 4 SER 4 197 197 SER SER A . n A 1 5 GLN 5 198 198 GLN GLN A . n A 1 6 ASP 6 199 199 ASP ASP A . n A 1 7 ASP 7 200 200 ASP ASP A . n A 1 8 ASP 8 201 201 ASP ASP A . n A 1 9 TYR 9 202 202 TYR TYR A . n A 1 10 LEU 10 203 203 LEU LEU A . n A 1 11 TYR 11 204 204 TYR TYR A . n A 1 12 CYS 12 205 205 CYS CYS A . n A 1 13 GLU 13 206 206 GLU GLU A . n A 1 14 LYS 14 207 207 LYS LYS A . n A 1 15 CYS 15 208 208 CYS CYS A . n A 1 16 GLN 16 209 209 GLN GLN A . n A 1 17 ASN 17 210 210 ASN ASN A . n A 1 18 PHE 18 211 211 PHE PHE A . n A 1 19 PHE 19 212 212 PHE PHE A . n A 1 20 ILE 20 213 213 ILE ILE A . n A 1 21 ASP 21 214 214 ASP ASP A . n A 1 22 SER 22 215 215 SER SER A . n A 1 23 CYS 23 216 216 CYS CYS A . n A 1 24 PRO 24 217 217 PRO PRO A . n A 1 25 ASN 25 218 218 ASN ASN A . n A 1 26 HIS 26 219 219 HIS HIS A . n A 1 27 GLY 27 220 220 GLY GLY A . n A 1 28 PRO 28 221 221 PRO PRO A . n A 1 29 PRO 29 222 222 PRO PRO A . n A 1 30 LEU 30 223 223 LEU LEU A . n A 1 31 PHE 31 224 224 PHE PHE A . n A 1 32 VAL 32 225 225 VAL VAL A . n A 1 33 LYS 33 226 226 LYS LYS A . n A 1 34 ASP 34 227 227 ASP ASP A . n A 1 35 SER 35 228 228 SER SER A . n A 1 36 MET 36 229 229 MET MET A . n A 1 37 VAL 37 230 230 VAL VAL A . n A 1 38 ASP 38 231 231 ASP ASP A . n A 1 39 ARG 39 232 232 ARG ARG A . n A 1 40 GLY 40 233 233 GLY GLY A . n A 1 41 HIS 41 234 234 HIS HIS A . n A 1 42 PRO 42 235 235 PRO PRO A . n A 1 43 ASN 43 236 236 ASN ASN A . n A 1 44 HIS 44 237 237 HIS HIS A . n A 1 45 SER 45 238 238 SER SER A . n A 1 46 VAL 46 239 239 VAL VAL A . n A 1 47 LEU 47 240 240 LEU LEU A . n A 1 48 SER 48 241 241 SER SER A . n A 1 49 LEU 49 242 242 LEU LEU A . n A 1 50 PRO 50 243 243 PRO PRO A . n A 1 51 PRO 51 244 244 PRO PRO A . n A 1 52 GLY 52 245 245 GLY GLY A . n A 1 53 LEU 53 246 246 LEU LEU A . n A 1 54 ARG 54 247 247 ARG ARG A . n A 1 55 ILE 55 248 248 ILE ILE A . n A 1 56 SER 56 249 249 SER SER A . n A 1 57 PRO 57 250 250 PRO PRO A . n A 1 58 SER 58 251 251 SER SER A . n A 1 59 GLY 59 252 252 GLY GLY A . n A 1 60 ILE 60 253 253 ILE ILE A . n A 1 61 PRO 61 254 254 PRO PRO A . n A 1 62 GLU 62 255 255 GLU GLU A . n A 1 63 ALA 63 256 256 ALA ALA A . n A 1 64 GLY 64 257 257 GLY GLY A . n A 1 65 LEU 65 258 258 LEU LEU A . n A 1 66 GLY 66 259 259 GLY GLY A . n A 1 67 VAL 67 260 260 VAL VAL A . n A 1 68 TRP 68 261 261 TRP TRP A . n A 1 69 ASN 69 262 262 ASN ASN A . n A 1 70 GLU 70 263 263 GLU GLU A . n A 1 71 ALA 71 264 264 ALA ALA A . n A 1 72 SER 72 265 265 SER SER A . n A 1 73 ASP 73 266 266 ASP ASP A . n A 1 74 LEU 74 267 267 LEU LEU A . n A 1 75 PRO 75 268 268 PRO PRO A . n A 1 76 VAL 76 269 269 VAL VAL A . n A 1 77 GLY 77 270 270 GLY GLY A . n A 1 78 LEU 78 271 271 LEU LEU A . n A 1 79 HIS 79 272 272 HIS HIS A . n A 1 80 PHE 80 273 273 PHE PHE A . n A 1 81 GLY 81 274 274 GLY GLY A . n A 1 82 PRO 82 275 275 PRO PRO A . n A 1 83 TYR 83 276 276 TYR TYR A . n A 1 84 GLU 84 277 277 GLU GLU A . n A 1 85 GLY 85 278 278 GLY GLY A . n A 1 86 GLN 86 279 279 GLN GLN A . n A 1 87 ILE 87 280 280 ILE ILE A . n A 1 88 THR 88 281 281 THR THR A . n A 1 89 GLU 89 282 282 GLU GLU A . n A 1 90 ASP 90 283 283 ASP ASP A . n A 1 91 GLU 91 284 284 GLU GLU A . n A 1 92 GLU 92 285 285 GLU GLU A . n A 1 93 ALA 93 286 286 ALA ALA A . n A 1 94 ALA 94 287 287 ALA ALA A . n A 1 95 ASN 95 288 288 ASN ASN A . n A 1 96 SER 96 289 289 SER SER A . n A 1 97 GLY 97 290 290 GLY GLY A . n A 1 98 TYR 98 291 291 TYR TYR A . n A 1 99 SER 99 292 292 SER SER A . n A 1 100 TRP 100 293 293 TRP TRP A . n A 1 101 LEU 101 294 294 LEU LEU A . n A 1 102 ILE 102 295 295 ILE ILE A . n A 1 103 THR 103 296 296 THR THR A . n A 1 104 LYS 104 297 297 LYS LYS A . n A 1 105 GLY 105 298 298 GLY GLY A . n A 1 106 ARG 106 299 299 ARG ARG A . n A 1 107 ASN 107 300 300 ASN ASN A . n A 1 108 CYS 108 301 301 CYS CYS A . n A 1 109 TYR 109 302 302 TYR TYR A . n A 1 110 GLU 110 303 303 GLU GLU A . n A 1 111 TYR 111 304 304 TYR TYR A . n A 1 112 VAL 112 305 305 VAL VAL A . n A 1 113 ASP 113 306 306 ASP ASP A . n A 1 114 GLY 114 307 307 GLY GLY A . n A 1 115 GLN 115 308 308 GLN GLN A . n A 1 116 ASP 116 309 309 ASP ASP A . n A 1 117 GLU 117 310 310 GLU GLU A . n A 1 118 SER 118 311 311 SER SER A . n A 1 119 GLN 119 312 312 GLN GLN A . n A 1 120 ALA 120 313 313 ALA ALA A . n A 1 121 ASN 121 314 314 ASN ASN A . n A 1 122 TRP 122 315 315 TRP TRP A . n A 1 123 MET 123 316 316 MET MET A . n A 1 124 ARG 124 317 317 ARG ARG A . n A 1 125 TYR 125 318 318 TYR TYR A . n A 1 126 VAL 126 319 319 VAL VAL A . n A 1 127 ASN 127 320 320 ASN ASN A . n A 1 128 CYS 128 321 321 CYS CYS A . n A 1 129 ALA 129 322 322 ALA ALA A . n A 1 130 ARG 130 323 323 ARG ARG A . n A 1 131 ASP 131 324 324 ASP ASP A . n A 1 132 ASP 132 325 325 ASP ASP A . n A 1 133 GLU 133 326 326 GLU GLU A . n A 1 134 GLU 134 327 327 GLU GLU A . n A 1 135 GLN 135 328 328 GLN GLN A . n A 1 136 ASN 136 329 329 ASN ASN A . n A 1 137 LEU 137 330 330 LEU LEU A . n A 1 138 VAL 138 331 331 VAL VAL A . n A 1 139 ALA 139 332 332 ALA ALA A . n A 1 140 PHE 140 333 333 PHE PHE A . n A 1 141 GLN 141 334 334 GLN GLN A . n A 1 142 TYR 142 335 335 TYR TYR A . n A 1 143 HIS 143 336 336 HIS HIS A . n A 1 144 ARG 144 337 337 ARG ARG A . n A 1 145 LYS 145 338 338 LYS LYS A . n A 1 146 ILE 146 339 339 ILE ILE A . n A 1 147 PHE 147 340 340 PHE PHE A . n A 1 148 TYR 148 341 341 TYR TYR A . n A 1 149 ARG 149 342 342 ARG ARG A . n A 1 150 THR 150 343 343 THR THR A . n A 1 151 CYS 151 344 344 CYS CYS A . n A 1 152 ARG 152 345 345 ARG ARG A . n A 1 153 VAL 153 346 346 VAL VAL A . n A 1 154 ILE 154 347 347 ILE ILE A . n A 1 155 ARG 155 348 348 ARG ARG A . n A 1 156 PRO 156 349 349 PRO PRO A . n A 1 157 GLY 157 350 350 GLY GLY A . n A 1 158 CYS 158 351 351 CYS CYS A . n A 1 159 GLU 159 352 352 GLU GLU A . n A 1 160 LEU 160 353 353 LEU LEU A . n A 1 161 LEU 161 354 354 LEU LEU A . n A 1 162 VAL 162 355 355 VAL VAL A . n A 1 163 TRP 163 356 356 TRP TRP A . n A 1 164 TYR 164 357 357 TYR TYR A . n A 1 165 GLY 165 358 358 GLY GLY A . n A 1 166 ASP 166 359 359 ASP ASP A . n A 1 167 GLU 167 360 360 GLU GLU A . n A 1 168 TYR 168 361 361 TYR TYR A . n A 1 169 GLY 169 362 362 GLY GLY A . n A 1 170 GLN 170 363 363 GLN GLN A . n A 1 171 GLU 171 364 364 GLU GLU A . n A 1 172 LEU 172 365 365 LEU LEU A . n A 1 173 GLY 173 366 366 GLY GLY A . n A 1 174 ILE 174 367 367 ILE ILE A . n A 1 175 LYS 175 368 ? ? ? A . n B 1 1 GLY 1 194 ? ? ? B . n B 1 2 ALA 2 195 ? ? ? B . n B 1 3 MET 3 196 196 MET MET B . n B 1 4 SER 4 197 197 SER SER B . n B 1 5 GLN 5 198 198 GLN GLN B . n B 1 6 ASP 6 199 199 ASP ASP B . n B 1 7 ASP 7 200 200 ASP ASP B . n B 1 8 ASP 8 201 201 ASP ASP B . n B 1 9 TYR 9 202 202 TYR TYR B . n B 1 10 LEU 10 203 203 LEU LEU B . n B 1 11 TYR 11 204 204 TYR TYR B . n B 1 12 CYS 12 205 205 CYS CYS B . n B 1 13 GLU 13 206 206 GLU GLU B . n B 1 14 LYS 14 207 207 LYS LYS B . n B 1 15 CYS 15 208 208 CYS CYS B . n B 1 16 GLN 16 209 209 GLN GLN B . n B 1 17 ASN 17 210 210 ASN ASN B . n B 1 18 PHE 18 211 211 PHE PHE B . n B 1 19 PHE 19 212 212 PHE PHE B . n B 1 20 ILE 20 213 213 ILE ILE B . n B 1 21 ASP 21 214 214 ASP ASP B . n B 1 22 SER 22 215 215 SER SER B . n B 1 23 CYS 23 216 216 CYS CYS B . n B 1 24 PRO 24 217 217 PRO PRO B . n B 1 25 ASN 25 218 218 ASN ASN B . n B 1 26 HIS 26 219 219 HIS HIS B . n B 1 27 GLY 27 220 220 GLY GLY B . n B 1 28 PRO 28 221 221 PRO PRO B . n B 1 29 PRO 29 222 222 PRO PRO B . n B 1 30 LEU 30 223 223 LEU LEU B . n B 1 31 PHE 31 224 224 PHE PHE B . n B 1 32 VAL 32 225 225 VAL VAL B . n B 1 33 LYS 33 226 226 LYS LYS B . n B 1 34 ASP 34 227 227 ASP ASP B . n B 1 35 SER 35 228 228 SER SER B . n B 1 36 MET 36 229 229 MET MET B . n B 1 37 VAL 37 230 230 VAL VAL B . n B 1 38 ASP 38 231 231 ASP ASP B . n B 1 39 ARG 39 232 232 ARG ARG B . n B 1 40 GLY 40 233 233 GLY GLY B . n B 1 41 HIS 41 234 234 HIS HIS B . n B 1 42 PRO 42 235 235 PRO PRO B . n B 1 43 ASN 43 236 236 ASN ASN B . n B 1 44 HIS 44 237 237 HIS HIS B . n B 1 45 SER 45 238 238 SER SER B . n B 1 46 VAL 46 239 239 VAL VAL B . n B 1 47 LEU 47 240 240 LEU LEU B . n B 1 48 SER 48 241 241 SER SER B . n B 1 49 LEU 49 242 242 LEU LEU B . n B 1 50 PRO 50 243 243 PRO PRO B . n B 1 51 PRO 51 244 244 PRO PRO B . n B 1 52 GLY 52 245 245 GLY GLY B . n B 1 53 LEU 53 246 246 LEU LEU B . n B 1 54 ARG 54 247 247 ARG ARG B . n B 1 55 ILE 55 248 248 ILE ILE B . n B 1 56 SER 56 249 249 SER SER B . n B 1 57 PRO 57 250 250 PRO PRO B . n B 1 58 SER 58 251 251 SER SER B . n B 1 59 GLY 59 252 252 GLY GLY B . n B 1 60 ILE 60 253 253 ILE ILE B . n B 1 61 PRO 61 254 254 PRO PRO B . n B 1 62 GLU 62 255 255 GLU GLU B . n B 1 63 ALA 63 256 256 ALA ALA B . n B 1 64 GLY 64 257 257 GLY GLY B . n B 1 65 LEU 65 258 258 LEU LEU B . n B 1 66 GLY 66 259 259 GLY GLY B . n B 1 67 VAL 67 260 260 VAL VAL B . n B 1 68 TRP 68 261 261 TRP TRP B . n B 1 69 ASN 69 262 262 ASN ASN B . n B 1 70 GLU 70 263 263 GLU GLU B . n B 1 71 ALA 71 264 264 ALA ALA B . n B 1 72 SER 72 265 265 SER SER B . n B 1 73 ASP 73 266 266 ASP ASP B . n B 1 74 LEU 74 267 267 LEU LEU B . n B 1 75 PRO 75 268 268 PRO PRO B . n B 1 76 VAL 76 269 269 VAL VAL B . n B 1 77 GLY 77 270 270 GLY GLY B . n B 1 78 LEU 78 271 271 LEU LEU B . n B 1 79 HIS 79 272 272 HIS HIS B . n B 1 80 PHE 80 273 273 PHE PHE B . n B 1 81 GLY 81 274 274 GLY GLY B . n B 1 82 PRO 82 275 275 PRO PRO B . n B 1 83 TYR 83 276 276 TYR TYR B . n B 1 84 GLU 84 277 277 GLU GLU B . n B 1 85 GLY 85 278 278 GLY GLY B . n B 1 86 GLN 86 279 279 GLN GLN B . n B 1 87 ILE 87 280 280 ILE ILE B . n B 1 88 THR 88 281 281 THR THR B . n B 1 89 GLU 89 282 282 GLU GLU B . n B 1 90 ASP 90 283 283 ASP ASP B . n B 1 91 GLU 91 284 284 GLU GLU B . n B 1 92 GLU 92 285 285 GLU GLU B . n B 1 93 ALA 93 286 286 ALA ALA B . n B 1 94 ALA 94 287 287 ALA ALA B . n B 1 95 ASN 95 288 288 ASN ASN B . n B 1 96 SER 96 289 289 SER SER B . n B 1 97 GLY 97 290 290 GLY GLY B . n B 1 98 TYR 98 291 291 TYR TYR B . n B 1 99 SER 99 292 292 SER SER B . n B 1 100 TRP 100 293 293 TRP TRP B . n B 1 101 LEU 101 294 294 LEU LEU B . n B 1 102 ILE 102 295 295 ILE ILE B . n B 1 103 THR 103 296 296 THR THR B . n B 1 104 LYS 104 297 297 LYS LYS B . n B 1 105 GLY 105 298 298 GLY GLY B . n B 1 106 ARG 106 299 299 ARG ARG B . n B 1 107 ASN 107 300 300 ASN ASN B . n B 1 108 CYS 108 301 301 CYS CYS B . n B 1 109 TYR 109 302 302 TYR TYR B . n B 1 110 GLU 110 303 303 GLU GLU B . n B 1 111 TYR 111 304 304 TYR TYR B . n B 1 112 VAL 112 305 305 VAL VAL B . n B 1 113 ASP 113 306 306 ASP ASP B . n B 1 114 GLY 114 307 307 GLY GLY B . n B 1 115 GLN 115 308 308 GLN GLN B . n B 1 116 ASP 116 309 309 ASP ASP B . n B 1 117 GLU 117 310 310 GLU GLU B . n B 1 118 SER 118 311 311 SER SER B . n B 1 119 GLN 119 312 312 GLN GLN B . n B 1 120 ALA 120 313 313 ALA ALA B . n B 1 121 ASN 121 314 314 ASN ASN B . n B 1 122 TRP 122 315 315 TRP TRP B . n B 1 123 MET 123 316 316 MET MET B . n B 1 124 ARG 124 317 317 ARG ARG B . n B 1 125 TYR 125 318 318 TYR TYR B . n B 1 126 VAL 126 319 319 VAL VAL B . n B 1 127 ASN 127 320 320 ASN ASN B . n B 1 128 CYS 128 321 321 CYS CYS B . n B 1 129 ALA 129 322 322 ALA ALA B . n B 1 130 ARG 130 323 323 ARG ARG B . n B 1 131 ASP 131 324 324 ASP ASP B . n B 1 132 ASP 132 325 325 ASP ASP B . n B 1 133 GLU 133 326 326 GLU GLU B . n B 1 134 GLU 134 327 327 GLU GLU B . n B 1 135 GLN 135 328 328 GLN GLN B . n B 1 136 ASN 136 329 329 ASN ASN B . n B 1 137 LEU 137 330 330 LEU LEU B . n B 1 138 VAL 138 331 331 VAL VAL B . n B 1 139 ALA 139 332 332 ALA ALA B . n B 1 140 PHE 140 333 333 PHE PHE B . n B 1 141 GLN 141 334 334 GLN GLN B . n B 1 142 TYR 142 335 335 TYR TYR B . n B 1 143 HIS 143 336 336 HIS HIS B . n B 1 144 ARG 144 337 337 ARG ARG B . n B 1 145 LYS 145 338 338 LYS LYS B . n B 1 146 ILE 146 339 339 ILE ILE B . n B 1 147 PHE 147 340 340 PHE PHE B . n B 1 148 TYR 148 341 341 TYR TYR B . n B 1 149 ARG 149 342 342 ARG ARG B . n B 1 150 THR 150 343 343 THR THR B . n B 1 151 CYS 151 344 344 CYS CYS B . n B 1 152 ARG 152 345 345 ARG ARG B . n B 1 153 VAL 153 346 346 VAL VAL B . n B 1 154 ILE 154 347 347 ILE ILE B . n B 1 155 ARG 155 348 348 ARG ARG B . n B 1 156 PRO 156 349 349 PRO PRO B . n B 1 157 GLY 157 350 350 GLY GLY B . n B 1 158 CYS 158 351 351 CYS CYS B . n B 1 159 GLU 159 352 352 GLU GLU B . n B 1 160 LEU 160 353 353 LEU LEU B . n B 1 161 LEU 161 354 354 LEU LEU B . n B 1 162 VAL 162 355 355 VAL VAL B . n B 1 163 TRP 163 356 356 TRP TRP B . n B 1 164 TYR 164 357 357 TYR TYR B . n B 1 165 GLY 165 358 ? ? ? B . n B 1 166 ASP 166 359 ? ? ? B . n B 1 167 GLU 167 360 ? ? ? B . n B 1 168 TYR 168 361 ? ? ? B . n B 1 169 GLY 169 362 ? ? ? B . n B 1 170 GLN 170 363 ? ? ? B . n B 1 171 GLU 171 364 ? ? ? B . n B 1 172 LEU 172 365 ? ? ? B . n B 1 173 GLY 173 366 ? ? ? B . n B 1 174 ILE 174 367 ? ? ? B . n B 1 175 LYS 175 368 ? ? ? B . n C 2 1 ALA 1 1 1 ALA ALA C . n C 2 2 ARG 2 2 2 ARG ARG C . n C 2 3 THR 3 3 3 THR THR C . n C 2 4 MLY 4 4 4 MLY MLY C . n C 2 5 GLN 5 5 5 GLN GLN C . n C 2 6 THR 6 6 6 THR THR C . n C 2 7 ALA 7 7 7 ALA ALA C . n C 2 8 ARG 8 8 ? ? ? C . n C 2 9 LYS 9 9 ? ? ? C . n C 2 10 TYR 10 10 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SAH 1 394 394 SAH SAH A . E 4 ZN 1 493 493 ZN ZN A . F 4 ZN 1 493 493 ZN ZN B . G 5 GOL 1 1358 1358 GOL GOL B . H 6 HOH 1 2001 2001 HOH HOH A . H 6 HOH 2 2002 2002 HOH HOH A . H 6 HOH 3 2003 2003 HOH HOH A . H 6 HOH 4 2004 2004 HOH HOH A . H 6 HOH 5 2005 2005 HOH HOH A . H 6 HOH 6 2006 2006 HOH HOH A . H 6 HOH 7 2007 2007 HOH HOH A . H 6 HOH 8 2008 2008 HOH HOH A . H 6 HOH 9 2009 2009 HOH HOH A . H 6 HOH 10 2010 2010 HOH HOH A . H 6 HOH 11 2011 2011 HOH HOH A . H 6 HOH 12 2012 2012 HOH HOH A . H 6 HOH 13 2013 2013 HOH HOH A . H 6 HOH 14 2014 2014 HOH HOH A . H 6 HOH 15 2015 2015 HOH HOH A . H 6 HOH 16 2016 2016 HOH HOH A . H 6 HOH 17 2017 2017 HOH HOH A . H 6 HOH 18 2018 2018 HOH HOH A . H 6 HOH 19 2019 2019 HOH HOH A . H 6 HOH 20 2020 2020 HOH HOH A . H 6 HOH 21 2021 2021 HOH HOH A . H 6 HOH 22 2022 2022 HOH HOH A . H 6 HOH 23 2023 2023 HOH HOH A . H 6 HOH 24 2024 2024 HOH HOH A . H 6 HOH 25 2025 2025 HOH HOH A . H 6 HOH 26 2026 2026 HOH HOH A . H 6 HOH 27 2027 2027 HOH HOH A . H 6 HOH 28 2028 2028 HOH HOH A . H 6 HOH 29 2029 2029 HOH HOH A . H 6 HOH 30 2030 2030 HOH HOH A . H 6 HOH 31 2031 2031 HOH HOH A . H 6 HOH 32 2032 2032 HOH HOH A . H 6 HOH 33 2033 2033 HOH HOH A . H 6 HOH 34 2034 2034 HOH HOH A . H 6 HOH 35 2035 2035 HOH HOH A . I 6 HOH 1 2001 2001 HOH HOH B . I 6 HOH 2 2002 2002 HOH HOH B . I 6 HOH 3 2003 2003 HOH HOH B . I 6 HOH 4 2004 2004 HOH HOH B . I 6 HOH 5 2005 2005 HOH HOH B . I 6 HOH 6 2006 2006 HOH HOH B . I 6 HOH 7 2007 2007 HOH HOH B . I 6 HOH 8 2008 2008 HOH HOH B . I 6 HOH 9 2009 2009 HOH HOH B . I 6 HOH 10 2010 2010 HOH HOH B . I 6 HOH 11 2011 2011 HOH HOH B . I 6 HOH 12 2012 2012 HOH HOH B . I 6 HOH 13 2013 2013 HOH HOH B . I 6 HOH 14 2014 2014 HOH HOH B . I 6 HOH 15 2015 2015 HOH HOH B . I 6 HOH 16 2016 2016 HOH HOH B . I 6 HOH 17 2017 2017 HOH HOH B . I 6 HOH 18 2018 2018 HOH HOH B . I 6 HOH 19 2019 2019 HOH HOH B . I 6 HOH 20 2020 2020 HOH HOH B . I 6 HOH 21 2021 2021 HOH HOH B . I 6 HOH 22 2022 2022 HOH HOH B . I 6 HOH 23 2023 2023 HOH HOH B . I 6 HOH 24 2024 2024 HOH HOH B . I 6 HOH 25 2025 2025 HOH HOH B . I 6 HOH 26 2026 2026 HOH HOH B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id MLY _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id MLY _pdbx_struct_mod_residue.auth_seq_id 4 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-DIMETHYL-LYSINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,H 2 1 B,F,G,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1340 ? 1 MORE -5.5 ? 1 'SSA (A^2)' 9800 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 12 ? A CYS 205 ? 1_555 ZN ? E ZN . ? A ZN 493 ? 1_555 SG ? A CYS 15 ? A CYS 208 ? 1_555 121.4 ? 2 SG ? A CYS 12 ? A CYS 205 ? 1_555 ZN ? E ZN . ? A ZN 493 ? 1_555 SG ? A CYS 23 ? A CYS 216 ? 1_555 123.3 ? 3 SG ? A CYS 15 ? A CYS 208 ? 1_555 ZN ? E ZN . ? A ZN 493 ? 1_555 SG ? A CYS 23 ? A CYS 216 ? 1_555 93.9 ? 4 SG ? A CYS 12 ? A CYS 205 ? 1_555 ZN ? E ZN . ? A ZN 493 ? 1_555 ND1 ? A HIS 26 ? A HIS 219 ? 1_555 118.8 ? 5 SG ? A CYS 15 ? A CYS 208 ? 1_555 ZN ? E ZN . ? A ZN 493 ? 1_555 ND1 ? A HIS 26 ? A HIS 219 ? 1_555 83.5 ? 6 SG ? A CYS 23 ? A CYS 216 ? 1_555 ZN ? E ZN . ? A ZN 493 ? 1_555 ND1 ? A HIS 26 ? A HIS 219 ? 1_555 107.2 ? 7 SG ? B CYS 12 ? B CYS 205 ? 1_555 ZN ? F ZN . ? B ZN 493 ? 1_555 SG ? B CYS 15 ? B CYS 208 ? 1_555 113.9 ? 8 SG ? B CYS 12 ? B CYS 205 ? 1_555 ZN ? F ZN . ? B ZN 493 ? 1_555 SG ? B CYS 23 ? B CYS 216 ? 1_555 121.0 ? 9 SG ? B CYS 15 ? B CYS 208 ? 1_555 ZN ? F ZN . ? B ZN 493 ? 1_555 SG ? B CYS 23 ? B CYS 216 ? 1_555 90.1 ? 10 SG ? B CYS 12 ? B CYS 205 ? 1_555 ZN ? F ZN . ? B ZN 493 ? 1_555 ND1 ? B HIS 26 ? B HIS 219 ? 1_555 122.4 ? 11 SG ? B CYS 15 ? B CYS 208 ? 1_555 ZN ? F ZN . ? B ZN 493 ? 1_555 ND1 ? B HIS 26 ? B HIS 219 ? 1_555 84.4 ? 12 SG ? B CYS 23 ? B CYS 216 ? 1_555 ZN ? F ZN . ? B ZN 493 ? 1_555 ND1 ? B HIS 26 ? B HIS 219 ? 1_555 112.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-16 2 'Structure model' 1 1 2013-11-06 3 'Structure model' 1 2 2019-10-09 4 'Structure model' 1 3 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Experimental preparation' 5 3 'Structure model' Other 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' reflns 4 3 'Structure model' reflns_shell 5 3 'Structure model' struct_conn 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' database_2 9 4 'Structure model' pdbx_initial_refinement_model 10 4 'Structure model' pdbx_struct_conn_angle 11 4 'Structure model' struct_conn 12 4 'Structure model' struct_conn_type 13 4 'Structure model' struct_ncs_dom_lim 14 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_exptl_crystal_grow.temp' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_reflns.pdbx_Rmerge_I_obs' 5 3 'Structure model' '_reflns_shell.Rmerge_I_obs' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.value' 20 4 'Structure model' '_struct_conn.conn_type_id' 21 4 'Structure model' '_struct_conn.id' 22 4 'Structure model' '_struct_conn.pdbx_dist_value' 23 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 4 'Structure model' '_struct_conn_type.id' 39 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 40 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 41 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 42 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 43 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 44 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 45 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 46 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 47 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 48 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 49 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.7.0029 ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? XSCALE 'data scaling' . ? 3 ? ? ? ? PHASER phasing . ? 4 ? ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 297 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NH2 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 337 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 200 ? ? -37.59 -32.92 2 1 GLU A 263 ? ? -124.16 -50.64 3 1 ARG A 299 ? ? 71.53 54.67 4 1 ASP B 200 ? ? -39.68 -34.32 5 1 GLU B 263 ? ? -122.06 -50.14 6 1 ASP B 283 ? ? -49.21 155.36 7 1 ARG B 299 ? ? 55.13 71.71 8 1 ASN B 300 ? ? 92.13 -7.19 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLU _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 284 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLU _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 285 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 147.40 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 194 ? A GLY 1 2 1 Y 1 A LYS 368 ? A LYS 175 3 1 Y 1 B GLY 194 ? B GLY 1 4 1 Y 1 B ALA 195 ? B ALA 2 5 1 Y 1 B GLY 358 ? B GLY 165 6 1 Y 1 B ASP 359 ? B ASP 166 7 1 Y 1 B GLU 360 ? B GLU 167 8 1 Y 1 B TYR 361 ? B TYR 168 9 1 Y 1 B GLY 362 ? B GLY 169 10 1 Y 1 B GLN 363 ? B GLN 170 11 1 Y 1 B GLU 364 ? B GLU 171 12 1 Y 1 B LEU 365 ? B LEU 172 13 1 Y 1 B GLY 366 ? B GLY 173 14 1 Y 1 B ILE 367 ? B ILE 174 15 1 Y 1 B LYS 368 ? B LYS 175 16 1 Y 1 C ARG 8 ? C ARG 8 17 1 Y 1 C LYS 9 ? C LYS 9 18 1 Y 1 C TYR 10 ? C TYR 10 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 MLY N N N N 264 MLY CA C N S 265 MLY CB C N N 266 MLY CG C N N 267 MLY CD C N N 268 MLY CE C N N 269 MLY NZ N N N 270 MLY CH1 C N N 271 MLY CH2 C N N 272 MLY C C N N 273 MLY O O N N 274 MLY OXT O N N 275 MLY H H N N 276 MLY H2 H N N 277 MLY HA H N N 278 MLY HB2 H N N 279 MLY HB3 H N N 280 MLY HG2 H N N 281 MLY HG3 H N N 282 MLY HD2 H N N 283 MLY HD3 H N N 284 MLY HE2 H N N 285 MLY HE3 H N N 286 MLY HH11 H N N 287 MLY HH12 H N N 288 MLY HH13 H N N 289 MLY HH21 H N N 290 MLY HH22 H N N 291 MLY HH23 H N N 292 MLY HXT H N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SAH N N N N 334 SAH CA C N S 335 SAH CB C N N 336 SAH CG C N N 337 SAH SD S N N 338 SAH C C N N 339 SAH O O N N 340 SAH OXT O N N 341 SAH "C5'" C N N 342 SAH "C4'" C N S 343 SAH "O4'" O N N 344 SAH "C3'" C N S 345 SAH "O3'" O N N 346 SAH "C2'" C N R 347 SAH "O2'" O N N 348 SAH "C1'" C N R 349 SAH N9 N Y N 350 SAH C8 C Y N 351 SAH N7 N Y N 352 SAH C5 C Y N 353 SAH C6 C Y N 354 SAH N6 N N N 355 SAH N1 N Y N 356 SAH C2 C Y N 357 SAH N3 N Y N 358 SAH C4 C Y N 359 SAH HN1 H N N 360 SAH HN2 H N N 361 SAH HA H N N 362 SAH HB1 H N N 363 SAH HB2 H N N 364 SAH HG1 H N N 365 SAH HG2 H N N 366 SAH HXT H N N 367 SAH "H5'1" H N N 368 SAH "H5'2" H N N 369 SAH "H4'" H N N 370 SAH "H3'" H N N 371 SAH "HO3'" H N N 372 SAH "H2'" H N N 373 SAH "HO2'" H N N 374 SAH "H1'" H N N 375 SAH H8 H N N 376 SAH HN61 H N N 377 SAH HN62 H N N 378 SAH H2 H N N 379 SER N N N N 380 SER CA C N S 381 SER C C N N 382 SER O O N N 383 SER CB C N N 384 SER OG O N N 385 SER OXT O N N 386 SER H H N N 387 SER H2 H N N 388 SER HA H N N 389 SER HB2 H N N 390 SER HB3 H N N 391 SER HG H N N 392 SER HXT H N N 393 THR N N N N 394 THR CA C N S 395 THR C C N N 396 THR O O N N 397 THR CB C N R 398 THR OG1 O N N 399 THR CG2 C N N 400 THR OXT O N N 401 THR H H N N 402 THR H2 H N N 403 THR HA H N N 404 THR HB H N N 405 THR HG1 H N N 406 THR HG21 H N N 407 THR HG22 H N N 408 THR HG23 H N N 409 THR HXT H N N 410 TRP N N N N 411 TRP CA C N S 412 TRP C C N N 413 TRP O O N N 414 TRP CB C N N 415 TRP CG C Y N 416 TRP CD1 C Y N 417 TRP CD2 C Y N 418 TRP NE1 N Y N 419 TRP CE2 C Y N 420 TRP CE3 C Y N 421 TRP CZ2 C Y N 422 TRP CZ3 C Y N 423 TRP CH2 C Y N 424 TRP OXT O N N 425 TRP H H N N 426 TRP H2 H N N 427 TRP HA H N N 428 TRP HB2 H N N 429 TRP HB3 H N N 430 TRP HD1 H N N 431 TRP HE1 H N N 432 TRP HE3 H N N 433 TRP HZ2 H N N 434 TRP HZ3 H N N 435 TRP HH2 H N N 436 TRP HXT H N N 437 TYR N N N N 438 TYR CA C N S 439 TYR C C N N 440 TYR O O N N 441 TYR CB C N N 442 TYR CG C Y N 443 TYR CD1 C Y N 444 TYR CD2 C Y N 445 TYR CE1 C Y N 446 TYR CE2 C Y N 447 TYR CZ C Y N 448 TYR OH O N N 449 TYR OXT O N N 450 TYR H H N N 451 TYR H2 H N N 452 TYR HA H N N 453 TYR HB2 H N N 454 TYR HB3 H N N 455 TYR HD1 H N N 456 TYR HD2 H N N 457 TYR HE1 H N N 458 TYR HE2 H N N 459 TYR HH H N N 460 TYR HXT H N N 461 VAL N N N N 462 VAL CA C N S 463 VAL C C N N 464 VAL O O N N 465 VAL CB C N N 466 VAL CG1 C N N 467 VAL CG2 C N N 468 VAL OXT O N N 469 VAL H H N N 470 VAL H2 H N N 471 VAL HA H N N 472 VAL HB H N N 473 VAL HG11 H N N 474 VAL HG12 H N N 475 VAL HG13 H N N 476 VAL HG21 H N N 477 VAL HG22 H N N 478 VAL HG23 H N N 479 VAL HXT H N N 480 ZN ZN ZN N N 481 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 MLY N CA sing N N 250 MLY N H sing N N 251 MLY N H2 sing N N 252 MLY CA CB sing N N 253 MLY CA C sing N N 254 MLY CA HA sing N N 255 MLY CB CG sing N N 256 MLY CB HB2 sing N N 257 MLY CB HB3 sing N N 258 MLY CG CD sing N N 259 MLY CG HG2 sing N N 260 MLY CG HG3 sing N N 261 MLY CD CE sing N N 262 MLY CD HD2 sing N N 263 MLY CD HD3 sing N N 264 MLY CE NZ sing N N 265 MLY CE HE2 sing N N 266 MLY CE HE3 sing N N 267 MLY NZ CH1 sing N N 268 MLY NZ CH2 sing N N 269 MLY CH1 HH11 sing N N 270 MLY CH1 HH12 sing N N 271 MLY CH1 HH13 sing N N 272 MLY CH2 HH21 sing N N 273 MLY CH2 HH22 sing N N 274 MLY CH2 HH23 sing N N 275 MLY C O doub N N 276 MLY C OXT sing N N 277 MLY OXT HXT sing N N 278 PHE N CA sing N N 279 PHE N H sing N N 280 PHE N H2 sing N N 281 PHE CA C sing N N 282 PHE CA CB sing N N 283 PHE CA HA sing N N 284 PHE C O doub N N 285 PHE C OXT sing N N 286 PHE CB CG sing N N 287 PHE CB HB2 sing N N 288 PHE CB HB3 sing N N 289 PHE CG CD1 doub Y N 290 PHE CG CD2 sing Y N 291 PHE CD1 CE1 sing Y N 292 PHE CD1 HD1 sing N N 293 PHE CD2 CE2 doub Y N 294 PHE CD2 HD2 sing N N 295 PHE CE1 CZ doub Y N 296 PHE CE1 HE1 sing N N 297 PHE CE2 CZ sing Y N 298 PHE CE2 HE2 sing N N 299 PHE CZ HZ sing N N 300 PHE OXT HXT sing N N 301 PRO N CA sing N N 302 PRO N CD sing N N 303 PRO N H sing N N 304 PRO CA C sing N N 305 PRO CA CB sing N N 306 PRO CA HA sing N N 307 PRO C O doub N N 308 PRO C OXT sing N N 309 PRO CB CG sing N N 310 PRO CB HB2 sing N N 311 PRO CB HB3 sing N N 312 PRO CG CD sing N N 313 PRO CG HG2 sing N N 314 PRO CG HG3 sing N N 315 PRO CD HD2 sing N N 316 PRO CD HD3 sing N N 317 PRO OXT HXT sing N N 318 SAH N CA sing N N 319 SAH N HN1 sing N N 320 SAH N HN2 sing N N 321 SAH CA CB sing N N 322 SAH CA C sing N N 323 SAH CA HA sing N N 324 SAH CB CG sing N N 325 SAH CB HB1 sing N N 326 SAH CB HB2 sing N N 327 SAH CG SD sing N N 328 SAH CG HG1 sing N N 329 SAH CG HG2 sing N N 330 SAH SD "C5'" sing N N 331 SAH C O doub N N 332 SAH C OXT sing N N 333 SAH OXT HXT sing N N 334 SAH "C5'" "C4'" sing N N 335 SAH "C5'" "H5'1" sing N N 336 SAH "C5'" "H5'2" sing N N 337 SAH "C4'" "O4'" sing N N 338 SAH "C4'" "C3'" sing N N 339 SAH "C4'" "H4'" sing N N 340 SAH "O4'" "C1'" sing N N 341 SAH "C3'" "O3'" sing N N 342 SAH "C3'" "C2'" sing N N 343 SAH "C3'" "H3'" sing N N 344 SAH "O3'" "HO3'" sing N N 345 SAH "C2'" "O2'" sing N N 346 SAH "C2'" "C1'" sing N N 347 SAH "C2'" "H2'" sing N N 348 SAH "O2'" "HO2'" sing N N 349 SAH "C1'" N9 sing N N 350 SAH "C1'" "H1'" sing N N 351 SAH N9 C8 sing Y N 352 SAH N9 C4 sing Y N 353 SAH C8 N7 doub Y N 354 SAH C8 H8 sing N N 355 SAH N7 C5 sing Y N 356 SAH C5 C6 sing Y N 357 SAH C5 C4 doub Y N 358 SAH C6 N6 sing N N 359 SAH C6 N1 doub Y N 360 SAH N6 HN61 sing N N 361 SAH N6 HN62 sing N N 362 SAH N1 C2 sing Y N 363 SAH C2 N3 doub Y N 364 SAH C2 H2 sing N N 365 SAH N3 C4 sing Y N 366 SER N CA sing N N 367 SER N H sing N N 368 SER N H2 sing N N 369 SER CA C sing N N 370 SER CA CB sing N N 371 SER CA HA sing N N 372 SER C O doub N N 373 SER C OXT sing N N 374 SER CB OG sing N N 375 SER CB HB2 sing N N 376 SER CB HB3 sing N N 377 SER OG HG sing N N 378 SER OXT HXT sing N N 379 THR N CA sing N N 380 THR N H sing N N 381 THR N H2 sing N N 382 THR CA C sing N N 383 THR CA CB sing N N 384 THR CA HA sing N N 385 THR C O doub N N 386 THR C OXT sing N N 387 THR CB OG1 sing N N 388 THR CB CG2 sing N N 389 THR CB HB sing N N 390 THR OG1 HG1 sing N N 391 THR CG2 HG21 sing N N 392 THR CG2 HG22 sing N N 393 THR CG2 HG23 sing N N 394 THR OXT HXT sing N N 395 TRP N CA sing N N 396 TRP N H sing N N 397 TRP N H2 sing N N 398 TRP CA C sing N N 399 TRP CA CB sing N N 400 TRP CA HA sing N N 401 TRP C O doub N N 402 TRP C OXT sing N N 403 TRP CB CG sing N N 404 TRP CB HB2 sing N N 405 TRP CB HB3 sing N N 406 TRP CG CD1 doub Y N 407 TRP CG CD2 sing Y N 408 TRP CD1 NE1 sing Y N 409 TRP CD1 HD1 sing N N 410 TRP CD2 CE2 doub Y N 411 TRP CD2 CE3 sing Y N 412 TRP NE1 CE2 sing Y N 413 TRP NE1 HE1 sing N N 414 TRP CE2 CZ2 sing Y N 415 TRP CE3 CZ3 doub Y N 416 TRP CE3 HE3 sing N N 417 TRP CZ2 CH2 doub Y N 418 TRP CZ2 HZ2 sing N N 419 TRP CZ3 CH2 sing Y N 420 TRP CZ3 HZ3 sing N N 421 TRP CH2 HH2 sing N N 422 TRP OXT HXT sing N N 423 TYR N CA sing N N 424 TYR N H sing N N 425 TYR N H2 sing N N 426 TYR CA C sing N N 427 TYR CA CB sing N N 428 TYR CA HA sing N N 429 TYR C O doub N N 430 TYR C OXT sing N N 431 TYR CB CG sing N N 432 TYR CB HB2 sing N N 433 TYR CB HB3 sing N N 434 TYR CG CD1 doub Y N 435 TYR CG CD2 sing Y N 436 TYR CD1 CE1 sing Y N 437 TYR CD1 HD1 sing N N 438 TYR CD2 CE2 doub Y N 439 TYR CD2 HD2 sing N N 440 TYR CE1 CZ doub Y N 441 TYR CE1 HE1 sing N N 442 TYR CE2 CZ sing Y N 443 TYR CE2 HE2 sing N N 444 TYR CZ OH sing N N 445 TYR OH HH sing N N 446 TYR OXT HXT sing N N 447 VAL N CA sing N N 448 VAL N H sing N N 449 VAL N H2 sing N N 450 VAL CA C sing N N 451 VAL CA CB sing N N 452 VAL CA HA sing N N 453 VAL C O doub N N 454 VAL C OXT sing N N 455 VAL CB CG1 sing N N 456 VAL CB CG2 sing N N 457 VAL CB HB sing N N 458 VAL CG1 HG11 sing N N 459 VAL CG1 HG12 sing N N 460 VAL CG1 HG13 sing N N 461 VAL CG2 HG21 sing N N 462 VAL CG2 HG22 sing N N 463 VAL CG2 HG23 sing N N 464 VAL OXT HXT sing N N 465 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 S-ADENOSYL-L-HOMOCYSTEINE SAH 4 'ZINC ION' ZN 5 GLYCEROL GOL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3RAY _pdbx_initial_refinement_model.details 'PDB ENTRY 3RAY' #