HEADER IMMUNE SYSTEM 10-SEP-13 4C55 TITLE CRYSTAL STRUCTURE OF SERUM-DERIVED HUMAN IGG4 FC COMPND MOL_ID: 1; COMPND 2 MOLECULE: IG GAMMA-4 CHAIN C REGION; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: FC FRAGMENT, RESIDUES 110-327; COMPND 5 SYNONYM: IGG4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS IMMUNE SYSTEM, IGG, ANTIBODY, IMMUNOGLOBULIN, IGG1 EXPDTA X-RAY DIFFRACTION AUTHOR A.M.DAVIES,T.RISPENS,P.OOIJEVAAR-DEHEER,H.J.GOULD,R.JEFFERIS, AUTHOR 2 R.C.AALBERSE,B.J.SUTTON REVDAT 5 20-DEC-23 4C55 1 HETSYN REVDAT 4 29-JUL-20 4C55 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 05-FEB-14 4C55 1 JRNL REVDAT 2 20-NOV-13 4C55 1 JRNL REVDAT 1 13-NOV-13 4C55 0 JRNL AUTH A.M.DAVIES,T.RISPENS,P.OOIJEVAAR-DEHEER,H.J.GOULD, JRNL AUTH 2 R.JEFFERIS,R.C.AALBERSE,B.J.SUTTON JRNL TITL STRUCTURAL DETERMINANTS OF UNIQUE PROPERTIES OF HUMAN JRNL TITL 2 IGG4-FC JRNL REF J.MOL.BIOL. V. 426 630 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 24211234 JRNL DOI 10.1016/J.JMB.2013.10.039 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 25411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1279 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6060 - 4.8868 0.98 2810 151 0.1574 0.1818 REMARK 3 2 4.8868 - 3.8793 1.00 2722 138 0.1470 0.2066 REMARK 3 3 3.8793 - 3.3891 1.00 2689 141 0.1901 0.2402 REMARK 3 4 3.3891 - 3.0792 1.00 2683 142 0.2144 0.3077 REMARK 3 5 3.0792 - 2.8586 1.00 2676 142 0.2412 0.2903 REMARK 3 6 2.8586 - 2.6900 1.00 2624 150 0.2464 0.3131 REMARK 3 7 2.6900 - 2.5553 1.00 2653 128 0.2637 0.3273 REMARK 3 8 2.5553 - 2.4441 1.00 2662 137 0.2840 0.3371 REMARK 3 9 2.4441 - 2.3500 1.00 2613 150 0.3161 0.3784 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3531 REMARK 3 ANGLE : 1.123 4843 REMARK 3 CHIRALITY : 0.071 589 REMARK 3 PLANARITY : 0.005 590 REMARK 3 DIHEDRAL : 29.351 1354 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 237 THROUGH 346 REMARK 3 ORIGIN FOR THE GROUP (A): 70.1961 94.9015 -2.8645 REMARK 3 T TENSOR REMARK 3 T11: 0.4028 T22: 0.4790 REMARK 3 T33: 0.4689 T12: -0.0010 REMARK 3 T13: -0.1471 T23: -0.1863 REMARK 3 L TENSOR REMARK 3 L11: 6.2674 L22: 3.3312 REMARK 3 L33: 1.8447 L12: 0.2972 REMARK 3 L13: -1.3045 L23: -0.5785 REMARK 3 S TENSOR REMARK 3 S11: 0.0683 S12: 0.8704 S13: -0.1613 REMARK 3 S21: -0.4145 S22: -0.1421 S23: 0.3439 REMARK 3 S31: 0.0287 S32: -0.2813 S33: 0.0847 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 347 THROUGH 444 REMARK 3 ORIGIN FOR THE GROUP (A): 68.2292 88.6754 28.2899 REMARK 3 T TENSOR REMARK 3 T11: 0.5204 T22: 0.4418 REMARK 3 T33: 0.4243 T12: 0.0148 REMARK 3 T13: 0.1906 T23: -0.0742 REMARK 3 L TENSOR REMARK 3 L11: 5.5610 L22: 4.2956 REMARK 3 L33: 5.2028 L12: -1.5128 REMARK 3 L13: 1.1765 L23: -1.2570 REMARK 3 S TENSOR REMARK 3 S11: -0.3957 S12: -0.4933 S13: -0.1193 REMARK 3 S21: 0.8598 S22: 0.0570 S23: 0.6331 REMARK 3 S31: -0.3560 S32: -0.2569 S33: 0.3013 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND RESID 238 THROUGH 251 REMARK 3 ORIGIN FOR THE GROUP (A): 89.0233 69.3289 11.5839 REMARK 3 T TENSOR REMARK 3 T11: 0.4672 T22: 0.6118 REMARK 3 T33: 0.4570 T12: -0.0090 REMARK 3 T13: 0.0889 T23: -0.0636 REMARK 3 L TENSOR REMARK 3 L11: 5.9734 L22: 6.4573 REMARK 3 L33: 6.9494 L12: 0.7622 REMARK 3 L13: -0.5135 L23: 0.1488 REMARK 3 S TENSOR REMARK 3 S11: -0.5183 S12: 0.9358 S13: -0.4366 REMARK 3 S21: -0.4391 S22: 0.0201 S23: 0.4969 REMARK 3 S31: 0.3757 S32: -0.4032 S33: 0.4305 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND RESID 252 THROUGH 264 REMARK 3 ORIGIN FOR THE GROUP (A): 91.2208 63.9054 12.7598 REMARK 3 T TENSOR REMARK 3 T11: 0.7253 T22: 0.7762 REMARK 3 T33: 0.6629 T12: -0.0819 REMARK 3 T13: 0.2519 T23: 0.1557 REMARK 3 L TENSOR REMARK 3 L11: 4.6846 L22: 4.1476 REMARK 3 L33: 4.7422 L12: 1.3438 REMARK 3 L13: -0.8013 L23: -1.9270 REMARK 3 S TENSOR REMARK 3 S11: -0.2660 S12: 0.2597 S13: -0.6177 REMARK 3 S21: -0.2184 S22: -0.5013 S23: -0.0870 REMARK 3 S31: 1.3912 S32: 0.5809 S33: 0.8724 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND RESID 265 THROUGH 315 REMARK 3 ORIGIN FOR THE GROUP (A): 94.1793 64.7094 2.6308 REMARK 3 T TENSOR REMARK 3 T11: 0.7951 T22: 0.6780 REMARK 3 T33: 0.5465 T12: -0.0376 REMARK 3 T13: 0.1968 T23: 0.0456 REMARK 3 L TENSOR REMARK 3 L11: 7.1144 L22: 5.9861 REMARK 3 L33: 7.9670 L12: 1.4090 REMARK 3 L13: 2.7223 L23: 1.7496 REMARK 3 S TENSOR REMARK 3 S11: -0.2232 S12: 0.3158 S13: -0.7004 REMARK 3 S21: -0.6397 S22: -0.2013 S23: 0.2141 REMARK 3 S31: 0.9021 S32: -0.0168 S33: 0.4115 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND RESID 316 THROUGH 336 REMARK 3 ORIGIN FOR THE GROUP (A): 98.2031 71.4977 -0.1868 REMARK 3 T TENSOR REMARK 3 T11: 1.0009 T22: 0.8334 REMARK 3 T33: 0.4357 T12: -0.0459 REMARK 3 T13: 0.1653 T23: 0.0918 REMARK 3 L TENSOR REMARK 3 L11: 4.0410 L22: 3.3811 REMARK 3 L33: 3.3541 L12: 0.6956 REMARK 3 L13: -0.6371 L23: 2.3467 REMARK 3 S TENSOR REMARK 3 S11: -0.5071 S12: 0.7354 S13: 0.1936 REMARK 3 S21: -1.0174 S22: -0.1419 S23: 0.4419 REMARK 3 S31: 0.5423 S32: 1.0378 S33: 0.2287 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND RESID 337 THROUGH 361 REMARK 3 ORIGIN FOR THE GROUP (A): 77.7893 78.4953 30.9394 REMARK 3 T TENSOR REMARK 3 T11: 0.7036 T22: 0.4280 REMARK 3 T33: 0.8143 T12: 0.0878 REMARK 3 T13: 0.3806 T23: 0.0983 REMARK 3 L TENSOR REMARK 3 L11: 6.5305 L22: 1.8312 REMARK 3 L33: 1.9109 L12: 0.1275 REMARK 3 L13: -0.7249 L23: -0.0878 REMARK 3 S TENSOR REMARK 3 S11: -0.4182 S12: -0.6172 S13: -0.6324 REMARK 3 S21: 0.9499 S22: 0.1989 S23: 0.5626 REMARK 3 S31: 0.0353 S32: -0.0019 S33: 0.1699 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND RESID 362 THROUGH 403 REMARK 3 ORIGIN FOR THE GROUP (A): 77.5768 74.1795 27.2717 REMARK 3 T TENSOR REMARK 3 T11: 0.5048 T22: 0.5313 REMARK 3 T33: 0.6307 T12: 0.0267 REMARK 3 T13: 0.2355 T23: 0.0582 REMARK 3 L TENSOR REMARK 3 L11: 4.4307 L22: 2.5128 REMARK 3 L33: 3.6287 L12: -1.2216 REMARK 3 L13: 0.1565 L23: -0.5689 REMARK 3 S TENSOR REMARK 3 S11: -0.1097 S12: -0.3535 S13: -0.9198 REMARK 3 S21: 0.6913 S22: 0.0254 S23: 0.7168 REMARK 3 S31: 0.0335 S32: 0.0577 S33: 0.1082 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND RESID 404 THROUGH 418 REMARK 3 ORIGIN FOR THE GROUP (A): 69.1863 73.0168 30.9495 REMARK 3 T TENSOR REMARK 3 T11: 0.3544 T22: 0.6951 REMARK 3 T33: 1.2253 T12: 0.0217 REMARK 3 T13: 0.5963 T23: 0.1461 REMARK 3 L TENSOR REMARK 3 L11: 0.6451 L22: 1.2295 REMARK 3 L33: 0.9874 L12: -0.7451 REMARK 3 L13: 0.0299 L23: 0.6172 REMARK 3 S TENSOR REMARK 3 S11: -0.6516 S12: -0.4746 S13: -1.1456 REMARK 3 S21: 0.5471 S22: -0.1796 S23: 1.6987 REMARK 3 S31: -0.1243 S32: -0.2058 S33: -0.3760 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND RESID 419 THROUGH 443 REMARK 3 ORIGIN FOR THE GROUP (A): 81.4070 69.5396 34.7366 REMARK 3 T TENSOR REMARK 3 T11: 0.7085 T22: 0.7419 REMARK 3 T33: 0.7394 T12: 0.1219 REMARK 3 T13: 0.3522 T23: 0.3268 REMARK 3 L TENSOR REMARK 3 L11: 7.8060 L22: 0.7183 REMARK 3 L33: 3.1167 L12: 0.5969 REMARK 3 L13: -1.6980 L23: 1.0083 REMARK 3 S TENSOR REMARK 3 S11: 0.1399 S12: -0.8978 S13: -1.0610 REMARK 3 S21: 1.6390 S22: 0.3483 S23: 0.6820 REMARK 3 S31: -0.1999 S32: 0.3125 S33: 0.0013 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4C55 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1290057991. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS IN XIA2 PACKAGE REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25471 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 80.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4C54 REMARK 200 REMARK 200 REMARK: RPIM VALUES OF 0.032 OVERALL AND 0.696 OUTER SHELL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES PH6.5. 18-20% PEG 20 000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.14900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.59500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.36900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.59500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.14900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.36900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 230 REMARK 465 ALA A 231 REMARK 465 PRO A 232 REMARK 465 GLU A 233 REMARK 465 PHE A 234 REMARK 465 LEU A 235 REMARK 465 GLY A 236 REMARK 465 LEU A 445 REMARK 465 GLY A 446 REMARK 465 LYS A 447 REMARK 465 PRO B 230 REMARK 465 ALA B 231 REMARK 465 PRO B 232 REMARK 465 GLU B 233 REMARK 465 PHE B 234 REMARK 465 LEU B 235 REMARK 465 GLY B 236 REMARK 465 GLY B 237 REMARK 465 SER B 444 REMARK 465 LEU B 445 REMARK 465 GLY B 446 REMARK 465 LYS B 447 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 252 CE REMARK 470 GLN A 268 OE1 NE2 REMARK 470 LYS A 288 CD CE NZ REMARK 470 LYS A 290 CE NZ REMARK 470 SER A 298 OG REMARK 470 LYS A 320 CE NZ REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LYS A 326 CG CD CE NZ REMARK 470 LEU A 328 CD1 CD2 REMARK 470 SER A 330 OG REMARK 470 LYS A 340 CD CE NZ REMARK 470 GLU A 356 CD OE1 OE2 REMARK 470 MET A 358 CE REMARK 470 LYS A 360 NZ REMARK 470 LYS A 370 CE NZ REMARK 470 GLN A 386 OE1 NE2 REMARK 470 LYS A 414 CE NZ REMARK 470 GLU A 419 OE1 OE2 REMARK 470 LYS A 439 NZ REMARK 470 LEU A 443 CD1 CD2 REMARK 470 SER A 444 OG REMARK 470 MET B 252 CE REMARK 470 ILE B 253 CD1 REMARK 470 ARG B 255 NH1 NH2 REMARK 470 GLN B 268 CG CD OE1 NE2 REMARK 470 GLU B 269 CG CD OE1 OE2 REMARK 470 LYS B 288 CG CD CE NZ REMARK 470 LYS B 290 CG CD CE NZ REMARK 470 ARG B 292 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 293 CD OE1 OE2 REMARK 470 GLU B 294 CB CG CD OE1 OE2 REMARK 470 PHE B 296 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR B 300 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN B 311 CD OE1 NE2 REMARK 470 LYS B 317 CE NZ REMARK 470 LYS B 326 CD CE NZ REMARK 470 ILE B 336 CD1 REMARK 470 LYS B 340 CE NZ REMARK 470 GLN B 355 OE1 NE2 REMARK 470 GLU B 356 CD OE1 OE2 REMARK 470 LYS B 360 CD CE NZ REMARK 470 ASN B 361 CG OD1 ND2 REMARK 470 ASN B 389 CG OD1 ND2 REMARK 470 LYS B 392 NZ REMARK 470 ARG B 409 NH1 NH2 REMARK 470 SER B 415 CB OG REMARK 470 ARG B 416 NH1 NH2 REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 SER B 440 OG REMARK 470 SER B 442 OG REMARK 470 LEU B 443 CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 297 C2 NAG C 1 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 285 10.09 -141.41 REMARK 500 LYS A 326 102.30 -54.60 REMARK 500 PRO B 271 173.19 -56.15 REMARK 500 THR B 359 30.35 -93.95 REMARK 500 PRO B 374 -174.97 -69.02 REMARK 500 ASN B 389 -31.32 -140.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG C 8 REMARK 610 MES A 1445 REMARK 610 MES B 1444 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C54 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RECOMBINANT HUMAN IGG4 FC DBREF 4C55 A 230 447 UNP P01861 IGHG4_HUMAN 110 327 DBREF 4C55 B 230 447 UNP P01861 IGHG4_HUMAN 110 327 SEQRES 1 A 218 PRO ALA PRO GLU PHE LEU GLY GLY PRO SER VAL PHE LEU SEQRES 2 A 218 PHE PRO PRO LYS PRO LYS ASP THR LEU MET ILE SER ARG SEQRES 3 A 218 THR PRO GLU VAL THR CYS VAL VAL VAL ASP VAL SER GLN SEQRES 4 A 218 GLU ASP PRO GLU VAL GLN PHE ASN TRP TYR VAL ASP GLY SEQRES 5 A 218 VAL GLU VAL HIS ASN ALA LYS THR LYS PRO ARG GLU GLU SEQRES 6 A 218 GLN PHE ASN SER THR TYR ARG VAL VAL SER VAL LEU THR SEQRES 7 A 218 VAL LEU HIS GLN ASP TRP LEU ASN GLY LYS GLU TYR LYS SEQRES 8 A 218 CYS LYS VAL SER ASN LYS GLY LEU PRO SER SER ILE GLU SEQRES 9 A 218 LYS THR ILE SER LYS ALA LYS GLY GLN PRO ARG GLU PRO SEQRES 10 A 218 GLN VAL TYR THR LEU PRO PRO SER GLN GLU GLU MET THR SEQRES 11 A 218 LYS ASN GLN VAL SER LEU THR CYS LEU VAL LYS GLY PHE SEQRES 12 A 218 TYR PRO SER ASP ILE ALA VAL GLU TRP GLU SER ASN GLY SEQRES 13 A 218 GLN PRO GLU ASN ASN TYR LYS THR THR PRO PRO VAL LEU SEQRES 14 A 218 ASP SER ASP GLY SER PHE PHE LEU TYR SER ARG LEU THR SEQRES 15 A 218 VAL ASP LYS SER ARG TRP GLN GLU GLY ASN VAL PHE SER SEQRES 16 A 218 CYS SER VAL MET HIS GLU ALA LEU HIS ASN HIS TYR THR SEQRES 17 A 218 GLN LYS SER LEU SER LEU SER LEU GLY LYS SEQRES 1 B 218 PRO ALA PRO GLU PHE LEU GLY GLY PRO SER VAL PHE LEU SEQRES 2 B 218 PHE PRO PRO LYS PRO LYS ASP THR LEU MET ILE SER ARG SEQRES 3 B 218 THR PRO GLU VAL THR CYS VAL VAL VAL ASP VAL SER GLN SEQRES 4 B 218 GLU ASP PRO GLU VAL GLN PHE ASN TRP TYR VAL ASP GLY SEQRES 5 B 218 VAL GLU VAL HIS ASN ALA LYS THR LYS PRO ARG GLU GLU SEQRES 6 B 218 GLN PHE ASN SER THR TYR ARG VAL VAL SER VAL LEU THR SEQRES 7 B 218 VAL LEU HIS GLN ASP TRP LEU ASN GLY LYS GLU TYR LYS SEQRES 8 B 218 CYS LYS VAL SER ASN LYS GLY LEU PRO SER SER ILE GLU SEQRES 9 B 218 LYS THR ILE SER LYS ALA LYS GLY GLN PRO ARG GLU PRO SEQRES 10 B 218 GLN VAL TYR THR LEU PRO PRO SER GLN GLU GLU MET THR SEQRES 11 B 218 LYS ASN GLN VAL SER LEU THR CYS LEU VAL LYS GLY PHE SEQRES 12 B 218 TYR PRO SER ASP ILE ALA VAL GLU TRP GLU SER ASN GLY SEQRES 13 B 218 GLN PRO GLU ASN ASN TYR LYS THR THR PRO PRO VAL LEU SEQRES 14 B 218 ASP SER ASP GLY SER PHE PHE LEU TYR SER ARG LEU THR SEQRES 15 B 218 VAL ASP LYS SER ARG TRP GLN GLU GLY ASN VAL PHE SER SEQRES 16 B 218 CYS SER VAL MET HIS GLU ALA LEU HIS ASN HIS TYR THR SEQRES 17 B 218 GLN LYS SER LEU SER LEU SER LEU GLY LYS MODRES 4C55 ASN A 297 ASN GLYCOSYLATION SITE MODRES 4C55 ASN B 297 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG C 5 14 HET GAL C 6 11 HET MAN C 7 11 HET NAG C 8 13 HET FUC C 9 10 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG D 5 14 HET GAL D 6 11 HET MAN D 7 11 HET NAG D 8 14 HET MES A1445 6 HET EDO A1446 4 HET EDO A1447 4 HET MES B1444 5 HET EDO B1445 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 8(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 MAN 4(C6 H12 O6) FORMUL 3 GAL 2(C6 H12 O6) FORMUL 3 FUC C6 H12 O5 FORMUL 5 MES 2(C6 H13 N O4 S) FORMUL 6 EDO 3(C2 H6 O2) FORMUL 10 HOH *72(H2 O) HELIX 1 1 LYS A 246 MET A 252 1 7 HELIX 2 2 LEU A 309 ASN A 315 1 7 HELIX 3 3 SER A 354 LYS A 360 5 7 HELIX 4 4 LYS A 414 GLU A 419 1 6 HELIX 5 5 LEU A 432 TYR A 436 5 5 HELIX 6 6 LYS B 246 MET B 252 1 7 HELIX 7 7 LEU B 309 GLY B 316 1 8 HELIX 8 8 SER B 354 MET B 358 5 5 HELIX 9 9 LYS B 414 GLU B 419 1 6 HELIX 10 10 LEU B 432 TYR B 436 5 5 SHEET 1 AA 4 SER A 239 PHE A 243 0 SHEET 2 AA 4 GLU A 258 VAL A 266 -1 O THR A 260 N PHE A 243 SHEET 3 AA 4 TYR A 300 THR A 307 -1 O TYR A 300 N VAL A 266 SHEET 4 AA 4 GLU A 293 GLU A 294 1 O GLU A 293 N ARG A 301 SHEET 1 AB 4 SER A 239 PHE A 243 0 SHEET 2 AB 4 GLU A 258 VAL A 266 -1 O THR A 260 N PHE A 243 SHEET 3 AB 4 TYR A 300 THR A 307 -1 O TYR A 300 N VAL A 266 SHEET 4 AB 4 LYS A 288 THR A 289 -1 O LYS A 288 N VAL A 305 SHEET 1 AC 2 GLU A 293 GLU A 294 0 SHEET 2 AC 2 TYR A 300 THR A 307 1 O ARG A 301 N GLU A 293 SHEET 1 AD 4 VAL A 282 VAL A 284 0 SHEET 2 AD 4 VAL A 273 VAL A 279 -1 O TRP A 277 N VAL A 284 SHEET 3 AD 4 TYR A 319 ASN A 325 -1 O LYS A 320 N TYR A 278 SHEET 4 AD 4 SER A 331 ILE A 336 -1 O ILE A 332 N VAL A 323 SHEET 1 AE 4 GLN A 347 LEU A 351 0 SHEET 2 AE 4 GLN A 362 PHE A 372 -1 O THR A 366 N LEU A 351 SHEET 3 AE 4 PHE A 404 ASP A 413 -1 O PHE A 404 N PHE A 372 SHEET 4 AE 4 VAL A 397 LEU A 398 1 O VAL A 397 N PHE A 405 SHEET 1 AF 4 GLN A 347 LEU A 351 0 SHEET 2 AF 4 GLN A 362 PHE A 372 -1 O THR A 366 N LEU A 351 SHEET 3 AF 4 PHE A 404 ASP A 413 -1 O PHE A 404 N PHE A 372 SHEET 4 AF 4 TYR A 391 THR A 393 -1 O LYS A 392 N ARG A 409 SHEET 1 AG 2 VAL A 397 LEU A 398 0 SHEET 2 AG 2 PHE A 404 ASP A 413 1 O PHE A 405 N VAL A 397 SHEET 1 AH 4 GLN A 386 PRO A 387 0 SHEET 2 AH 4 ALA A 378 SER A 383 -1 O SER A 383 N GLN A 386 SHEET 3 AH 4 PHE A 423 MET A 428 -1 O SER A 424 N GLU A 382 SHEET 4 AH 4 THR A 437 LEU A 441 -1 O THR A 437 N VAL A 427 SHEET 1 BA 4 SER B 239 PHE B 243 0 SHEET 2 BA 4 GLU B 258 VAL B 266 -1 O THR B 260 N PHE B 243 SHEET 3 BA 4 TYR B 300 THR B 307 -1 O TYR B 300 N VAL B 266 SHEET 4 BA 4 GLU B 293 GLU B 294 1 O GLU B 293 N ARG B 301 SHEET 1 BB 4 SER B 239 PHE B 243 0 SHEET 2 BB 4 GLU B 258 VAL B 266 -1 O THR B 260 N PHE B 243 SHEET 3 BB 4 TYR B 300 THR B 307 -1 O TYR B 300 N VAL B 266 SHEET 4 BB 4 LYS B 288 THR B 289 -1 O LYS B 288 N VAL B 305 SHEET 1 BC 2 GLU B 293 GLU B 294 0 SHEET 2 BC 2 TYR B 300 THR B 307 1 O ARG B 301 N GLU B 293 SHEET 1 BD 4 VAL B 282 VAL B 284 0 SHEET 2 BD 4 VAL B 273 VAL B 279 -1 O TRP B 277 N VAL B 284 SHEET 3 BD 4 TYR B 319 ASN B 325 -1 O LYS B 320 N TYR B 278 SHEET 4 BD 4 SER B 331 ILE B 336 -1 O ILE B 332 N VAL B 323 SHEET 1 BE 4 GLN B 347 LEU B 351 0 SHEET 2 BE 4 GLN B 362 PHE B 372 -1 O THR B 366 N LEU B 351 SHEET 3 BE 4 PHE B 404 ASP B 413 -1 O PHE B 404 N PHE B 372 SHEET 4 BE 4 VAL B 397 LEU B 398 1 O VAL B 397 N PHE B 405 SHEET 1 BF 4 GLN B 347 LEU B 351 0 SHEET 2 BF 4 GLN B 362 PHE B 372 -1 O THR B 366 N LEU B 351 SHEET 3 BF 4 PHE B 404 ASP B 413 -1 O PHE B 404 N PHE B 372 SHEET 4 BF 4 TYR B 391 THR B 393 -1 O LYS B 392 N ARG B 409 SHEET 1 BG 2 VAL B 397 LEU B 398 0 SHEET 2 BG 2 PHE B 404 ASP B 413 1 O PHE B 405 N VAL B 397 SHEET 1 BH 4 GLN B 386 PRO B 387 0 SHEET 2 BH 4 ALA B 378 SER B 383 -1 O SER B 383 N GLN B 386 SHEET 3 BH 4 PHE B 423 MET B 428 -1 O SER B 424 N GLU B 382 SHEET 4 BH 4 THR B 437 LEU B 441 -1 O THR B 437 N VAL B 427 SSBOND 1 CYS A 261 CYS A 321 1555 1555 2.07 SSBOND 2 CYS A 367 CYS A 425 1555 1555 2.03 SSBOND 3 CYS B 261 CYS B 321 1555 1555 2.03 SSBOND 4 CYS B 367 CYS B 425 1555 1555 2.03 LINK ND2 ASN A 297 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN B 297 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 9 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O6 BMA C 3 C1 MAN C 4 1555 1555 1.43 LINK O3 BMA C 3 C1 MAN C 7 1555 1555 1.44 LINK O2 MAN C 4 C1 NAG C 5 1555 1555 1.41 LINK O4 NAG C 5 C1 GAL C 6 1555 1555 1.44 LINK O2 MAN C 7 C1 NAG C 8 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.45 LINK O6 BMA D 3 C1 MAN D 4 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 7 1555 1555 1.43 LINK O2 MAN D 4 C1 NAG D 5 1555 1555 1.42 LINK O4 NAG D 5 C1 GAL D 6 1555 1555 1.44 LINK O2 MAN D 7 C1 NAG D 8 1555 1555 1.43 CISPEP 1 TYR A 373 PRO A 374 0 -7.42 CISPEP 2 TYR B 373 PRO B 374 0 -1.16 CRYST1 74.298 80.738 99.190 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013459 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012386 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010082 0.00000