HEADER LIGASE 10-SEP-13 4C5A TITLE THE X-RAY CRYSTAL STRUCTURES OF D-ALANYL-D-ALANINE LIGASE IN COMPLEX TITLE 2 ADP AND D-CYCLOSERINE PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-ALANINE--D-ALANINE LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: D-ALA-D-ALA LIGASE, D-ALANYLALANINE SYNTHETASE, D-ALANYL-D- COMPND 5 ALANINE LIGASE; COMPND 6 EC: 6.3.2.4; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PEPTIDE; COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPROEX; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS LIGASE, DDLB, ANTIBIOTIC EXPDTA X-RAY DIFFRACTION AUTHOR S.BATSON,V.MAJCE,A.J.LLOYD,D.REA,C.W.G.FISHWICK,K.J.SIMMONS,V.FULOP, AUTHOR 2 D.I.ROPER REVDAT 4 20-DEC-23 4C5A 1 REMARK LINK REVDAT 3 09-OCT-19 4C5A 1 SOURCE REVDAT 2 24-JAN-18 4C5A 1 SOURCE JRNL REVDAT 1 21-JAN-15 4C5A 0 JRNL AUTH S.BATSON,C.DE CHIARA,V.MAJCE,A.J.LLOYD,S.GOBEC,D.REA, JRNL AUTH 2 V.FULOP,C.W.THOROUGHGOOD,K.J.SIMMONS,C.G.DOWSON, JRNL AUTH 3 C.W.G.FISHWICK,L.P.S.DE CARVALHO,D.I.ROPER JRNL TITL INHIBITION OF D-ALA:D-ALA LIGASE THROUGH A PHOSPHORYLATED JRNL TITL 2 FORM OF THE ANTIBIOTIC D-CYCLOSERINE. JRNL REF NAT COMMUN V. 8 1939 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 29208891 JRNL DOI 10.1038/S41467-017-02118-7 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 67309 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2861 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4861 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE SET COUNT : 210 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4661 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 347 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : -0.49000 REMARK 3 B33 (A**2) : 0.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.113 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.109 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.887 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4835 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6558 ; 1.603 ; 2.006 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 616 ; 5.778 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 187 ;35.264 ;24.973 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 819 ;15.021 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;22.193 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 741 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3565 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3053 ; 0.858 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4861 ; 1.594 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1782 ; 2.555 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1697 ; 3.959 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 6.4296 39.5985 50.7772 REMARK 3 T TENSOR REMARK 3 T11: 0.1538 T22: 0.1464 REMARK 3 T33: 0.1683 T12: -0.0025 REMARK 3 T13: -0.0017 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 0.2915 L22: 0.2457 REMARK 3 L33: 0.4612 L12: 0.0924 REMARK 3 L13: 0.1491 L23: 0.0878 REMARK 3 S TENSOR REMARK 3 S11: -0.0389 S12: 0.0327 S13: 0.0429 REMARK 3 S21: -0.0409 S22: 0.0196 S23: 0.0000 REMARK 3 S31: -0.0468 S32: 0.0285 S33: 0.0192 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 181 REMARK 3 ORIGIN FOR THE GROUP (A): 24.8582 31.1969 70.5640 REMARK 3 T TENSOR REMARK 3 T11: 0.1530 T22: 0.1604 REMARK 3 T33: 0.1671 T12: 0.0172 REMARK 3 T13: -0.0153 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.4654 L22: 0.5321 REMARK 3 L33: 0.5621 L12: -0.1450 REMARK 3 L13: -0.0036 L23: 0.1591 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: -0.0539 S13: 0.0343 REMARK 3 S21: 0.0399 S22: 0.0638 S23: -0.0806 REMARK 3 S31: 0.0327 S32: 0.0272 S33: -0.0566 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 182 A 306 REMARK 3 ORIGIN FOR THE GROUP (A): 0.0152 32.2676 66.5092 REMARK 3 T TENSOR REMARK 3 T11: 0.1436 T22: 0.1643 REMARK 3 T33: 0.1601 T12: -0.0005 REMARK 3 T13: 0.0180 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.5479 L22: 0.3021 REMARK 3 L33: 0.3783 L12: 0.0585 REMARK 3 L13: 0.1704 L23: 0.0577 REMARK 3 S TENSOR REMARK 3 S11: -0.0188 S12: -0.0839 S13: -0.0171 REMARK 3 S21: 0.0293 S22: -0.0207 S23: 0.0468 REMARK 3 S31: 0.0052 S32: -0.0725 S33: 0.0395 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 138 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9131 58.6188 55.6283 REMARK 3 T TENSOR REMARK 3 T11: 0.1757 T22: 0.1401 REMARK 3 T33: 0.1564 T12: -0.0255 REMARK 3 T13: -0.0082 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 0.3207 L22: 0.2755 REMARK 3 L33: 1.0456 L12: 0.2343 REMARK 3 L13: 0.1014 L23: 0.0968 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: 0.0309 S13: -0.0053 REMARK 3 S21: -0.0373 S22: 0.0319 S23: 0.0048 REMARK 3 S31: -0.1328 S32: 0.0045 S33: 0.0101 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 139 B 276 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1305 66.4283 68.7717 REMARK 3 T TENSOR REMARK 3 T11: 0.2175 T22: 0.1034 REMARK 3 T33: 0.1635 T12: -0.0464 REMARK 3 T13: -0.0331 T23: -0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.8025 L22: 0.2526 REMARK 3 L33: 0.6307 L12: -0.0884 REMARK 3 L13: 0.0244 L23: 0.0498 REMARK 3 S TENSOR REMARK 3 S11: -0.0144 S12: 0.0416 S13: 0.1026 REMARK 3 S21: 0.0335 S22: -0.0177 S23: -0.0566 REMARK 3 S31: -0.2221 S32: 0.0628 S33: 0.0321 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 277 B 306 REMARK 3 ORIGIN FOR THE GROUP (A): 34.7157 63.1997 54.1035 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.5793 REMARK 3 T33: 0.1407 T12: 0.0272 REMARK 3 T13: -0.0616 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.9079 L22: 10.5405 REMARK 3 L33: 12.2793 L12: -0.3617 REMARK 3 L13: 1.8745 L23: 4.0612 REMARK 3 S TENSOR REMARK 3 S11: -0.0649 S12: 1.1883 S13: 0.0532 REMARK 3 S21: -0.4439 S22: -0.5260 S23: -0.9112 REMARK 3 S31: -1.5905 S32: -0.4858 S33: 0.5909 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4C5A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1290058248. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70170 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 49.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1IOW REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.89500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.99500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.75500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.99500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.89500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.75500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 SER A -22 REMARK 465 TYR A -21 REMARK 465 TYR A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 ASP A -13 REMARK 465 TYR A -12 REMARK 465 ILE A -11 REMARK 465 PRO A -10 REMARK 465 THR A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 ASN A -2 REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET B -23 REMARK 465 SER B -22 REMARK 465 TYR B -21 REMARK 465 TYR B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 ASP B -13 REMARK 465 TYR B -12 REMARK 465 ILE B -11 REMARK 465 PRO B -10 REMARK 465 THR B -9 REMARK 465 THR B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 ASN B -2 REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N MET A 1 C ALA C 8 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 46 108.10 -59.53 REMARK 500 THR B 278 -106.35 -69.33 REMARK 500 SER B 279 -36.45 -156.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2010 DISTANCE = 6.05 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 331 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 257 OD2 REMARK 620 2 GLU A 270 OE2 88.0 REMARK 620 3 ADP A 310 O1A 102.2 95.5 REMARK 620 4 ADP A 310 O2B 173.1 90.6 84.7 REMARK 620 5 DS0 A 311 O9 88.7 88.2 168.6 84.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 330 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 270 OE2 REMARK 620 2 GLU A 270 OE1 60.5 REMARK 620 3 ASN A 272 OD1 89.0 84.1 REMARK 620 4 ADP A 310 O1B 87.5 86.5 170.5 REMARK 620 5 DS0 A 311 O10 105.0 164.7 91.2 98.3 REMARK 620 6 HOH A2135 O 152.9 92.4 87.3 91.8 102.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 331 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 257 OD2 REMARK 620 2 GLU B 270 OE2 88.6 REMARK 620 3 ADP B 310 O1A 105.9 92.9 REMARK 620 4 ADP B 310 O1B 166.8 82.3 84.1 REMARK 620 5 DS0 B 311 O9 87.1 84.3 166.7 82.6 REMARK 620 6 HOH B2077 O 94.9 171.0 94.1 92.9 87.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 330 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 270 OE2 REMARK 620 2 GLU B 270 OE1 59.8 REMARK 620 3 ASN B 272 OD1 88.3 85.0 REMARK 620 4 ADP B 310 O3B 89.7 88.1 172.9 REMARK 620 5 DS0 B 311 O10 103.8 162.6 89.0 98.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DS0 A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 330 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DS0 B 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 330 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1307 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C5B RELATED DB: PDB REMARK 900 THE X-RAY CRYSTAL STRUCTURE OF D-ALANYL-D-ALANINE LIGASE IN COMPLEX REMARK 900 WITH ATP AND D-ALA-D-ALA REMARK 900 RELATED ID: 4C5C RELATED DB: PDB REMARK 900 THE X-RAY CRYSTAL STRUCTURE OF D-ALANYL-D-ALANINE LIGASE IN COMPLEX REMARK 900 WITH ADP AND D-ALA-D-ALA DBREF 4C5A A 1 306 UNP C4ZRI7 C4ZRI7_ECOBW 1 306 DBREF 4C5A B 1 306 UNP C4ZRI7 C4ZRI7_ECOBW 1 306 DBREF 4C5A C 1 8 PDB 4C5A 4C5A 1 8 SEQADV 4C5A MET A -23 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A SER A -22 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A TYR A -21 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A TYR A -20 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS A -19 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS A -18 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS A -17 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS A -16 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS A -15 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS A -14 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ASP A -13 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A TYR A -12 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ILE A -11 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A PRO A -10 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A THR A -9 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A THR A -8 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A GLU A -7 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ASN A -6 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A LEU A -5 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A TYR A -4 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A PHE A -3 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ASN A -2 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A GLY A -1 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ALA A 0 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A MET B -23 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A SER B -22 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A TYR B -21 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A TYR B -20 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS B -19 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS B -18 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS B -17 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS B -16 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS B -15 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A HIS B -14 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ASP B -13 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A TYR B -12 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ILE B -11 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A PRO B -10 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A THR B -9 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A THR B -8 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A GLU B -7 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ASN B -6 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A LEU B -5 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A TYR B -4 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A PHE B -3 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ASN B -2 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A GLY B -1 UNP C4ZRI7 EXPRESSION TAG SEQADV 4C5A ALA B 0 UNP C4ZRI7 EXPRESSION TAG SEQRES 1 A 330 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ILE SEQRES 2 A 330 PRO THR THR GLU ASN LEU TYR PHE ASN GLY ALA MET THR SEQRES 3 A 330 ASP LYS ILE ALA VAL LEU LEU GLY GLY THR SER ALA GLU SEQRES 4 A 330 ARG GLU VAL SER LEU ASN SER GLY ALA ALA VAL LEU ALA SEQRES 5 A 330 GLY LEU ARG GLU GLY GLY ILE ASP ALA TYR PRO VAL ASP SEQRES 6 A 330 PRO LYS GLU VAL ASP VAL THR GLN LEU LYS SER MET GLY SEQRES 7 A 330 PHE GLN LYS VAL PHE ILE ALA LEU HIS GLY ARG GLY GLY SEQRES 8 A 330 GLU ASP GLY THR LEU GLN GLY MET LEU GLU LEU MET GLY SEQRES 9 A 330 LEU PRO TYR THR GLY SER GLY VAL MET ALA SER ALA LEU SEQRES 10 A 330 SER MET ASP LYS LEU ARG SER LYS LEU LEU TRP GLN GLY SEQRES 11 A 330 ALA GLY LEU PRO VAL ALA PRO TRP VAL ALA LEU THR ARG SEQRES 12 A 330 ALA GLU PHE GLU LYS GLY LEU SER ASP LYS GLN LEU ALA SEQRES 13 A 330 GLU ILE SER ALA LEU GLY LEU PRO VAL ILE VAL LYS PRO SEQRES 14 A 330 SER ARG GLU GLY SER SER VAL GLY MET SER LYS VAL VAL SEQRES 15 A 330 ALA GLU ASN ALA LEU GLN ASP ALA LEU ARG LEU ALA PHE SEQRES 16 A 330 GLN HIS ASP GLU GLU VAL LEU ILE GLU LYS TRP LEU SER SEQRES 17 A 330 GLY PRO GLU PHE THR VAL ALA ILE LEU GLY GLU GLU ILE SEQRES 18 A 330 LEU PRO SER ILE ARG ILE GLN PRO SER GLY THR PHE TYR SEQRES 19 A 330 ASP TYR GLU ALA LYS TYR LEU SER ASP GLU THR GLN TYR SEQRES 20 A 330 PHE CYS PRO ALA GLY LEU GLU ALA SER GLN GLU ALA ASN SEQRES 21 A 330 LEU GLN ALA LEU VAL LEU LYS ALA TRP THR THR LEU GLY SEQRES 22 A 330 CYS LYS GLY TRP GLY ARG ILE ASP VAL MET LEU ASP SER SEQRES 23 A 330 ASP GLY GLN PHE TYR LEU LEU GLU ALA ASN THR SER PRO SEQRES 24 A 330 GLY MET THR SER HIS SER LEU VAL PRO MET ALA ALA ARG SEQRES 25 A 330 GLN ALA GLY MET SER PHE SER GLN LEU VAL VAL ARG ILE SEQRES 26 A 330 LEU GLU LEU ALA ASP SEQRES 1 B 330 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ILE SEQRES 2 B 330 PRO THR THR GLU ASN LEU TYR PHE ASN GLY ALA MET THR SEQRES 3 B 330 ASP LYS ILE ALA VAL LEU LEU GLY GLY THR SER ALA GLU SEQRES 4 B 330 ARG GLU VAL SER LEU ASN SER GLY ALA ALA VAL LEU ALA SEQRES 5 B 330 GLY LEU ARG GLU GLY GLY ILE ASP ALA TYR PRO VAL ASP SEQRES 6 B 330 PRO LYS GLU VAL ASP VAL THR GLN LEU LYS SER MET GLY SEQRES 7 B 330 PHE GLN LYS VAL PHE ILE ALA LEU HIS GLY ARG GLY GLY SEQRES 8 B 330 GLU ASP GLY THR LEU GLN GLY MET LEU GLU LEU MET GLY SEQRES 9 B 330 LEU PRO TYR THR GLY SER GLY VAL MET ALA SER ALA LEU SEQRES 10 B 330 SER MET ASP LYS LEU ARG SER LYS LEU LEU TRP GLN GLY SEQRES 11 B 330 ALA GLY LEU PRO VAL ALA PRO TRP VAL ALA LEU THR ARG SEQRES 12 B 330 ALA GLU PHE GLU LYS GLY LEU SER ASP LYS GLN LEU ALA SEQRES 13 B 330 GLU ILE SER ALA LEU GLY LEU PRO VAL ILE VAL LYS PRO SEQRES 14 B 330 SER ARG GLU GLY SER SER VAL GLY MET SER LYS VAL VAL SEQRES 15 B 330 ALA GLU ASN ALA LEU GLN ASP ALA LEU ARG LEU ALA PHE SEQRES 16 B 330 GLN HIS ASP GLU GLU VAL LEU ILE GLU LYS TRP LEU SER SEQRES 17 B 330 GLY PRO GLU PHE THR VAL ALA ILE LEU GLY GLU GLU ILE SEQRES 18 B 330 LEU PRO SER ILE ARG ILE GLN PRO SER GLY THR PHE TYR SEQRES 19 B 330 ASP TYR GLU ALA LYS TYR LEU SER ASP GLU THR GLN TYR SEQRES 20 B 330 PHE CYS PRO ALA GLY LEU GLU ALA SER GLN GLU ALA ASN SEQRES 21 B 330 LEU GLN ALA LEU VAL LEU LYS ALA TRP THR THR LEU GLY SEQRES 22 B 330 CYS LYS GLY TRP GLY ARG ILE ASP VAL MET LEU ASP SER SEQRES 23 B 330 ASP GLY GLN PHE TYR LEU LEU GLU ALA ASN THR SER PRO SEQRES 24 B 330 GLY MET THR SER HIS SER LEU VAL PRO MET ALA ALA ARG SEQRES 25 B 330 GLN ALA GLY MET SER PHE SER GLN LEU VAL VAL ARG ILE SEQRES 26 B 330 LEU GLU LEU ALA ASP SEQRES 1 C 8 GLU ASN LEU TYR PHE GLN GLY ALA HET ADP A 310 27 HET DS0 A 311 11 HET MG A 330 1 HET MG A 331 1 HET GOL A1307 6 HET GOL A1308 6 HET ADP B 310 27 HET DS0 B 311 11 HET MG B 330 1 HET MG B 331 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM DS0 [(4R)-4-AZANYL-4,5-DIHYDRO-1,2-OXAZOL-3-YL] DIHYDROGEN HETNAM 2 DS0 PHOSPHATE HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 ADP 2(C10 H15 N5 O10 P2) FORMUL 5 DS0 2(C3 H7 N2 O5 P) FORMUL 6 MG 4(MG 2+) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 14 HOH *347(H2 O) HELIX 1 1 GLU A 15 GLY A 33 1 19 HELIX 2 2 ASP A 46 LEU A 50 5 5 HELIX 3 3 GLY A 70 GLY A 80 1 11 HELIX 4 4 GLY A 87 ASP A 96 1 10 HELIX 5 5 ASP A 96 ALA A 107 1 12 HELIX 6 6 ARG A 119 GLY A 125 1 7 HELIX 7 7 SER A 127 LEU A 137 1 11 HELIX 8 8 ALA A 159 ASN A 161 5 3 HELIX 9 9 ALA A 162 GLN A 172 1 11 HELIX 10 10 ASP A 211 LEU A 217 1 7 HELIX 11 11 GLU A 230 GLY A 249 1 20 HELIX 12 12 SER A 281 ALA A 290 1 10 HELIX 13 13 SER A 293 LEU A 304 1 12 HELIX 14 14 GLU B 15 GLY B 33 1 19 HELIX 15 15 ASP B 46 LEU B 50 5 5 HELIX 16 16 LEU B 50 GLY B 54 5 5 HELIX 17 17 GLY B 70 GLY B 80 1 11 HELIX 18 18 GLY B 87 ASP B 96 1 10 HELIX 19 19 ASP B 96 ALA B 107 1 12 HELIX 20 20 ARG B 119 GLY B 125 1 7 HELIX 21 21 SER B 127 ALA B 136 1 10 HELIX 22 22 ALA B 159 ASN B 161 5 3 HELIX 23 23 ALA B 162 PHE B 171 1 10 HELIX 24 24 ASP B 211 LEU B 217 1 7 HELIX 25 25 GLU B 230 GLY B 249 1 20 HELIX 26 26 SER B 281 ALA B 290 1 10 HELIX 27 27 SER B 293 LEU B 304 1 12 SHEET 1 AA 3 ASP A 36 VAL A 40 0 SHEET 2 AA 3 LYS A 4 LEU A 8 1 O ILE A 5 N TYR A 38 SHEET 3 AA 3 LYS A 57 ILE A 60 1 O LYS A 57 N ALA A 6 SHEET 1 AB 4 TRP A 114 THR A 118 0 SHEET 2 AB 4 GLU A 176 LYS A 181 -1 O VAL A 177 N LEU A 117 SHEET 3 AB 4 VAL A 141 PRO A 145 -1 O ILE A 142 N GLU A 180 SHEET 4 AB 4 SER A 155 VAL A 157 -1 O SER A 155 N VAL A 143 SHEET 1 AC 2 GLU A 196 ILE A 197 0 SHEET 2 AC 2 GLU A 187 LEU A 193 -1 O LEU A 193 N GLU A 196 SHEET 1 AD 4 GLN A 222 PHE A 224 0 SHEET 2 AD 4 ILE A 201 GLN A 204 -1 O ARG A 202 N PHE A 224 SHEET 3 AD 4 GLU A 187 LEU A 193 -1 O GLU A 187 N ILE A 203 SHEET 4 AD 4 GLU A 196 ILE A 197 -1 O GLU A 196 N LEU A 193 SHEET 1 AE 5 GLN A 222 PHE A 224 0 SHEET 2 AE 5 ILE A 201 GLN A 204 -1 O ARG A 202 N PHE A 224 SHEET 3 AE 5 GLU A 187 LEU A 193 -1 O GLU A 187 N ILE A 203 SHEET 4 AE 5 TRP A 253 LEU A 260 -1 O GLY A 254 N ILE A 192 SHEET 5 AE 5 PHE A 266 ASN A 272 -1 O TYR A 267 N MET A 259 SHEET 1 BA 3 ASP B 36 VAL B 40 0 SHEET 2 BA 3 LYS B 4 LEU B 8 1 O ILE B 5 N TYR B 38 SHEET 3 BA 3 LYS B 57 ILE B 60 1 O LYS B 57 N ALA B 6 SHEET 1 BB 4 TRP B 114 THR B 118 0 SHEET 2 BB 4 GLU B 176 LYS B 181 -1 O VAL B 177 N LEU B 117 SHEET 3 BB 4 VAL B 141 PRO B 145 -1 O ILE B 142 N GLU B 180 SHEET 4 BB 4 SER B 155 VAL B 157 -1 O SER B 155 N VAL B 143 SHEET 1 BC 2 GLU B 196 ILE B 197 0 SHEET 2 BC 2 GLU B 187 LEU B 193 -1 O LEU B 193 N GLU B 196 SHEET 1 BD 4 GLN B 222 PHE B 224 0 SHEET 2 BD 4 ILE B 201 GLN B 204 -1 O ARG B 202 N PHE B 224 SHEET 3 BD 4 GLU B 187 LEU B 193 -1 O GLU B 187 N ILE B 203 SHEET 4 BD 4 GLU B 196 ILE B 197 -1 O GLU B 196 N LEU B 193 SHEET 1 BE 5 GLN B 222 PHE B 224 0 SHEET 2 BE 5 ILE B 201 GLN B 204 -1 O ARG B 202 N PHE B 224 SHEET 3 BE 5 GLU B 187 LEU B 193 -1 O GLU B 187 N ILE B 203 SHEET 4 BE 5 TRP B 253 LEU B 260 -1 O GLY B 254 N ILE B 192 SHEET 5 BE 5 PHE B 266 ASN B 272 -1 O TYR B 267 N MET B 259 LINK OD2 ASP A 257 MG MG A 331 1555 1555 2.02 LINK OE2 GLU A 270 MG MG A 330 1555 1555 2.14 LINK OE1 GLU A 270 MG MG A 330 1555 1555 2.26 LINK OE2 GLU A 270 MG MG A 331 1555 1555 2.10 LINK OD1 ASN A 272 MG MG A 330 1555 1555 2.18 LINK O1B ADP A 310 MG MG A 330 1555 1555 2.02 LINK O1A ADP A 310 MG MG A 331 1555 1555 2.01 LINK O2B ADP A 310 MG MG A 331 1555 1555 2.14 LINK O10 DS0 A 311 MG MG A 330 1555 1555 1.97 LINK O9 DS0 A 311 MG MG A 331 1555 1555 2.03 LINK MG MG A 330 O HOH A2135 1555 1555 2.10 LINK OD2 ASP B 257 MG MG B 331 1555 1555 1.98 LINK OE2 GLU B 270 MG MG B 330 1555 1555 2.11 LINK OE1 GLU B 270 MG MG B 330 1555 1555 2.21 LINK OE2 GLU B 270 MG MG B 331 1555 1555 2.12 LINK OD1 ASN B 272 MG MG B 330 1555 1555 2.27 LINK O3B ADP B 310 MG MG B 330 1555 1555 2.10 LINK O1A ADP B 310 MG MG B 331 1555 1555 1.90 LINK O1B ADP B 310 MG MG B 331 1555 1555 2.20 LINK O10 DS0 B 311 MG MG B 330 1555 1555 1.96 LINK O9 DS0 B 311 MG MG B 331 1555 1555 2.16 LINK MG MG B 331 O HOH B2077 1555 1555 2.12 CISPEP 1 LEU A 139 PRO A 140 0 1.81 CISPEP 2 GLY A 185 PRO A 186 0 8.12 CISPEP 3 CYS A 225 PRO A 226 0 8.56 CISPEP 4 LEU B 139 PRO B 140 0 1.33 CISPEP 5 GLY B 185 PRO B 186 0 7.63 CISPEP 6 CYS B 225 PRO B 226 0 -0.02 SITE 1 AC1 26 LYS A 97 ILE A 142 LYS A 144 GLU A 148 SITE 2 AC1 26 GLY A 149 SER A 150 SER A 151 MET A 154 SITE 3 AC1 26 GLU A 180 LYS A 181 TRP A 182 LEU A 183 SITE 4 AC1 26 GLU A 187 PHE A 209 TYR A 210 LYS A 215 SITE 5 AC1 26 ASP A 257 MET A 259 LEU A 269 GLU A 270 SITE 6 AC1 26 DS0 A 311 MG A 330 MG A 331 HOH A2135 SITE 7 AC1 26 HOH A2137 HOH A2238 SITE 1 AC2 17 GLU A 15 GLY A 149 SER A 150 LYS A 215 SITE 2 AC2 17 TYR A 216 ARG A 255 ASP A 257 GLU A 270 SITE 3 AC2 17 ASN A 272 PRO A 275 GLY A 276 ADP A 310 SITE 4 AC2 17 MG A 330 MG A 331 HOH A2028 HOH A2080 SITE 5 AC2 17 HOH A2190 SITE 1 AC3 6 GLU A 270 ASN A 272 ADP A 310 DS0 A 311 SITE 2 AC3 6 MG A 331 HOH A2135 SITE 1 AC4 5 ASP A 257 GLU A 270 ADP A 310 DS0 A 311 SITE 2 AC4 5 MG A 330 SITE 1 AC5 25 LYS B 97 ILE B 142 LYS B 144 GLU B 148 SITE 2 AC5 25 GLY B 149 SER B 150 SER B 151 MET B 154 SITE 3 AC5 25 GLU B 180 LYS B 181 TRP B 182 LEU B 183 SITE 4 AC5 25 GLU B 187 PHE B 209 TYR B 210 LYS B 215 SITE 5 AC5 25 ASP B 257 MET B 259 GLU B 270 DS0 B 311 SITE 6 AC5 25 MG B 330 MG B 331 HOH B2059 HOH B2077 SITE 7 AC5 25 HOH B2101 SITE 1 AC6 19 GLU B 15 HIS B 63 GLY B 149 SER B 150 SITE 2 AC6 19 LYS B 215 TYR B 216 ARG B 255 ASP B 257 SITE 3 AC6 19 GLU B 270 ASN B 272 PRO B 275 GLY B 276 SITE 4 AC6 19 ADP B 310 MG B 330 MG B 331 HOH B2006 SITE 5 AC6 19 HOH B2020 HOH B2077 HOH B2078 SITE 1 AC7 5 GLU B 270 ASN B 272 ADP B 310 DS0 B 311 SITE 2 AC7 5 MG B 331 SITE 1 AC8 6 ASP B 257 GLU B 270 ADP B 310 DS0 B 311 SITE 2 AC8 6 MG B 330 HOH B2077 SITE 1 AC9 8 GLU A 17 VAL A 18 TYR A 212 LEU A 217 SITE 2 AC9 8 ARG A 288 HOH A2034 HOH A2035 HOH A2239 SITE 1 BC1 6 ASP A 41 GLU A 44 ASN A 161 GLN A 164 SITE 2 BC1 6 ASP A 165 ARG A 168 CRYST1 53.790 97.510 109.990 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018591 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009092 0.00000