HEADER TRANSCRIPTION 11-SEP-13 4C5H TITLE CRYSTAL STRUCTURE OF THE MINIMAL PHO-SFMBT COMPLEX (P3121 SPACEGROUP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYCOMB PROTEIN SFMBT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: 4MBT, RESIDUES 531-980; COMPND 5 SYNONYM: SCM-LIKE WITH FOUR MBT DOMAIN-CONTAINING PROTEIN 1, DSFMBT; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: POLYCOMB PROTEIN PHO; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: SPACER, RESIDUES 116-246; COMPND 11 SYNONYM: PROTEIN PLEIOHOMEOTIC, TRANSCRIPTION FACTOR YY1 HOMOLOG; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 11 ORGANISM_COMMON: FRUIT FLY; SOURCE 12 ORGANISM_TAXID: 7227; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_VARIANT: GOLD KEYWDS TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.ALFIERI,S.GLATT,C.W.MUELLER REVDAT 2 20-DEC-23 4C5H 1 REMARK REVDAT 1 13-NOV-13 4C5H 0 JRNL AUTH C.ALFIERI,M.C.GAMBETTA,R.MATOS,S.GLATT,P.SEHR,S.FRATERMAN, JRNL AUTH 2 M.WILM,J.MUELLER,C.W.MUELLER JRNL TITL STRUCTURAL BASIS FOR TARGETING THE CHROMATIN REPRESSOR SFMBT JRNL TITL 2 TO POLYCOMB RESPONSE ELEMENTS JRNL REF GENES DEV. V. 27 2367 2013 JRNL REFN ISSN 0890-9369 JRNL PMID 24186981 JRNL DOI 10.1101/GAD.226621.113 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1088 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4945 - 6.3961 1.00 2718 144 0.2232 0.2147 REMARK 3 2 6.3961 - 5.0784 1.00 2613 137 0.2131 0.2551 REMARK 3 3 5.0784 - 4.4370 1.00 2590 137 0.1731 0.1707 REMARK 3 4 4.4370 - 4.0315 1.00 2558 134 0.1773 0.1949 REMARK 3 5 4.0315 - 3.7426 1.00 2570 136 0.2080 0.2309 REMARK 3 6 3.7426 - 3.5220 1.00 2559 133 0.2568 0.2758 REMARK 3 7 3.5220 - 3.3457 1.00 2529 133 0.3028 0.3218 REMARK 3 8 3.3457 - 3.2001 0.99 2532 134 0.3610 0.4107 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 85.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3743 REMARK 3 ANGLE : 0.605 5087 REMARK 3 CHIRALITY : 0.044 538 REMARK 3 PLANARITY : 0.003 654 REMARK 3 DIHEDRAL : 10.457 1333 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4C5H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1290058306. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.13747 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21760 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 3.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.20000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3H6Z REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 80.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.00667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.01333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 102.01333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 51.00667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 530 REMARK 465 ASP A 531 REMARK 465 PRO A 532 REMARK 465 THR A 533 REMARK 465 ASP A 579 REMARK 465 CYS A 580 REMARK 465 ASP A 581 REMARK 465 SER A 582 REMARK 465 ILE A 583 REMARK 465 GLU A 584 REMARK 465 VAL A 585 REMARK 465 ILE A 586 REMARK 465 GLN A 587 REMARK 465 PRO A 588 REMARK 465 GLY A 589 REMARK 465 GLN A 590 REMARK 465 THR A 591 REMARK 465 PRO A 592 REMARK 465 THR A 593 REMARK 465 VAL A 978 REMARK 465 ALA A 979 REMARK 465 HIS A 980 REMARK 465 GLY B 112 REMARK 465 ALA B 113 REMARK 465 MET B 114 REMARK 465 ALA B 115 REMARK 465 ASP B 116 REMARK 465 ILE B 117 REMARK 465 ASN B 118 REMARK 465 THR B 119 REMARK 465 GLU B 120 REMARK 465 GLU B 121 REMARK 465 SER B 122 REMARK 465 GLY B 123 REMARK 465 VAL B 124 REMARK 465 VAL B 125 REMARK 465 ASP B 126 REMARK 465 LYS B 127 REMARK 465 ASN B 128 REMARK 465 SER B 129 REMARK 465 PRO B 130 REMARK 465 PHE B 131 REMARK 465 LEU B 132 REMARK 465 THR B 133 REMARK 465 LEU B 134 REMARK 465 GLY B 135 REMARK 465 THR B 136 REMARK 465 THR B 137 REMARK 465 ILE B 138 REMARK 465 LEU B 139 REMARK 465 ASN B 140 REMARK 465 SER B 141 REMARK 465 ASN B 142 REMARK 465 GLY B 143 REMARK 465 LYS B 144 REMARK 465 ILE B 171 REMARK 465 SER B 172 REMARK 465 ASP B 173 REMARK 465 ASP B 174 REMARK 465 GLU B 175 REMARK 465 TYR B 176 REMARK 465 SER B 177 REMARK 465 GLY B 178 REMARK 465 SER B 179 REMARK 465 ASP B 180 REMARK 465 GLN B 181 REMARK 465 ILE B 182 REMARK 465 VAL B 183 REMARK 465 GLY B 184 REMARK 465 ALA B 185 REMARK 465 SER B 186 REMARK 465 ASP B 187 REMARK 465 LEU B 188 REMARK 465 LEU B 189 REMARK 465 LYS B 190 REMARK 465 GLY B 191 REMARK 465 LYS B 192 REMARK 465 GLU B 193 REMARK 465 GLU B 194 REMARK 465 PHE B 195 REMARK 465 GLY B 196 REMARK 465 ILE B 197 REMARK 465 ASP B 198 REMARK 465 GLY B 199 REMARK 465 PHE B 200 REMARK 465 THR B 201 REMARK 465 SER B 202 REMARK 465 GLN B 203 REMARK 465 GLN B 204 REMARK 465 ASN B 205 REMARK 465 LYS B 206 REMARK 465 GLU B 207 REMARK 465 TYR B 208 REMARK 465 GLN B 209 REMARK 465 LYS B 210 REMARK 465 MET B 211 REMARK 465 GLU B 212 REMARK 465 SER B 213 REMARK 465 LYS B 214 REMARK 465 PHE B 215 REMARK 465 THR B 216 REMARK 465 ASN B 217 REMARK 465 ALA B 218 REMARK 465 GLN B 219 REMARK 465 THR B 220 REMARK 465 LEU B 221 REMARK 465 GLU B 222 REMARK 465 MET B 223 REMARK 465 PRO B 224 REMARK 465 HIS B 225 REMARK 465 PRO B 226 REMARK 465 ILE B 227 REMARK 465 SER B 228 REMARK 465 SER B 229 REMARK 465 VAL B 230 REMARK 465 GLN B 231 REMARK 465 ILE B 232 REMARK 465 MET B 233 REMARK 465 ASP B 234 REMARK 465 HIS B 235 REMARK 465 LEU B 236 REMARK 465 ILE B 237 REMARK 465 LYS B 238 REMARK 465 GLU B 239 REMARK 465 ARG B 240 REMARK 465 GLY B 241 REMARK 465 ASN B 242 REMARK 465 LEU B 243 REMARK 465 SER B 244 REMARK 465 GLN B 245 REMARK 465 GLU B 246 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 534 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 535 OG REMARK 470 TYR A 536 CD1 CE1 REMARK 470 SER A 543 OG REMARK 470 LYS A 544 CG CD CE NZ REMARK 470 GLU A 545 CB CG CD OE1 OE2 REMARK 470 ASN A 546 CG OD1 ND2 REMARK 470 GLU A 562 OE1 OE2 REMARK 470 GLU A 576 CG CD OE1 OE2 REMARK 470 SER A 594 OG REMARK 470 PHE A 595 CE1 CE2 CZ REMARK 470 ASP A 618 OD1 REMARK 470 SER A 619 OG REMARK 470 HIS A 620 CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 634 CG1 REMARK 470 ARG A 640 CZ NH1 NH2 REMARK 470 ILE A 645 CG2 CD1 REMARK 470 ARG A 648 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 650 CD1 REMARK 470 GLU A 651 CD OE1 OE2 REMARK 470 HIS A 652 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 655 CG CD CE NZ REMARK 470 LYS A 658 CD CE NZ REMARK 470 ASP A 659 OD1 OD2 REMARK 470 SER A 666 OG REMARK 470 SER A 673 OG REMARK 470 ASN A 677 ND2 REMARK 470 ASP A 725 CG OD1 OD2 REMARK 470 LEU A 761 CD1 CD2 REMARK 470 ASP A 787 OD1 REMARK 470 SER A 791 OG REMARK 470 LYS A 794 CD CE NZ REMARK 470 SER A 797 OG REMARK 470 GLN A 837 NE2 REMARK 470 ILE A 866 CD1 REMARK 470 SER A 867 OG REMARK 470 ASN A 872 OD1 REMARK 470 ARG A 877 CG CD NE CZ NH1 NH2 REMARK 470 THR A 878 OG1 CG2 REMARK 470 GLU A 882 CG CD OE1 OE2 REMARK 470 ARG A 886 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 891 CG1 CG2 REMARK 470 PHE A 898 CZ REMARK 470 GLU A 947 CG CD OE1 OE2 REMARK 470 ARG A 977 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 147 CD NE CZ NH1 NH2 REMARK 470 GLU B 149 CG CD OE1 OE2 REMARK 470 GLN B 150 CG CD OE1 NE2 REMARK 470 LYS B 151 CD CE NZ REMARK 470 THR B 157 OG1 CG2 REMARK 470 MET B 158 CG SD CE REMARK 470 GLU B 159 CG CD OE1 OE2 REMARK 470 GLU B 161 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 543 N REMARK 480 GLY A 635 CA REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 745 NZ LYS A 825 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 674 59.17 -101.17 REMARK 500 ARG A 700 84.89 -158.39 REMARK 500 ILE A 701 0.65 -68.57 REMARK 500 GLU A 765 -135.58 56.52 REMARK 500 SER A 797 -85.55 -81.60 REMARK 500 SER A 867 94.35 -67.33 REMARK 500 ASP A 920 70.18 -153.80 REMARK 500 PRO A 921 4.99 -64.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C5E RELATED DB: PDB REMARK 900 (CRYSTAL STRUCTURE OF THE MINIMAL PHO-SFMBT COMPLEX P21 SPACEGROUP) REMARK 900 RELATED ID: 4C5G RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MINIMAL PHO-SFMBT COMPLEX (P6122 REMARK 900 SPACEGROUP) REMARK 900 RELATED ID: 4C5I RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MBTD1 YY1 COMPLEX DBREF 4C5H A 531 980 UNP Q9VK33 SMBT_DROME 531 980 DBREF 4C5H B 116 246 UNP Q8ST83 PHO_DROME 116 246 SEQADV 4C5H MET A 530 UNP Q9VK33 EXPRESSION TAG SEQADV 4C5H GLY B 112 UNP Q8ST83 EXPRESSION TAG SEQADV 4C5H ALA B 113 UNP Q8ST83 EXPRESSION TAG SEQADV 4C5H MET B 114 UNP Q8ST83 EXPRESSION TAG SEQADV 4C5H ALA B 115 UNP Q8ST83 EXPRESSION TAG SEQRES 1 A 451 MET ASP PRO THR HIS SER TYR ASP TRP LEU PRO ARG LEU SEQRES 2 A 451 SER LYS GLU ASN PHE ASN ALA ALA PRO VAL THR CYS PHE SEQRES 3 A 451 PRO HIS ALA PRO GLY CYS GLU VAL TRP ASP ASN LEU GLY SEQRES 4 A 451 VAL GLY MET LYS VAL GLU VAL GLU ASN THR ASP CYS ASP SEQRES 5 A 451 SER ILE GLU VAL ILE GLN PRO GLY GLN THR PRO THR SER SEQRES 6 A 451 PHE TRP VAL ALA THR ILE LEU GLU ILE LYS GLY TYR LYS SEQRES 7 A 451 ALA LEU MET SER TYR GLU GLY PHE ASP THR ASP SER HIS SEQRES 8 A 451 ASP PHE TRP VAL ASN LEU CYS ASN ALA GLU VAL HIS SER SEQRES 9 A 451 VAL GLY TRP CYS ALA THR ARG GLY LYS PRO LEU ILE PRO SEQRES 10 A 451 PRO ARG THR ILE GLU HIS LYS TYR LYS ASP TRP LYS ASP SEQRES 11 A 451 PHE LEU VAL GLY ARG LEU SER GLY ALA ARG THR LEU PRO SEQRES 12 A 451 SER ASN PHE TYR ASN LYS ILE ASN ASP SER LEU GLN SER SEQRES 13 A 451 ARG PHE ARG LEU GLY LEU ASN LEU GLU CYS VAL ASP LYS SEQRES 14 A 451 ASP ARG ILE SER GLN VAL ARG LEU ALA THR VAL THR LYS SEQRES 15 A 451 ILE VAL GLY LYS ARG LEU PHE LEU ARG TYR PHE ASP SER SEQRES 16 A 451 ASP ASP GLY PHE TRP CYS HIS GLU ASP SER PRO ILE ILE SEQRES 17 A 451 HIS PRO VAL GLY TRP ALA THR THR VAL GLY HIS ASN LEU SEQRES 18 A 451 ALA ALA PRO GLN ASP TYR LEU GLU ARG MET LEU ALA GLY SEQRES 19 A 451 ARG GLU ALA MET ILE GLU VAL HIS GLU ASP ASP ALA THR SEQRES 20 A 451 ILE GLU LEU PHE LYS MET ASN PHE THR PHE ASP GLU TYR SEQRES 21 A 451 TYR SER ASP GLY LYS THR ASN SER PHE VAL GLU GLY MET SEQRES 22 A 451 LYS LEU GLU ALA VAL ASP PRO LEU ASN LEU SER SER ILE SEQRES 23 A 451 CYS PRO ALA THR VAL MET ALA VAL LEU LYS PHE GLY TYR SEQRES 24 A 451 MET MET ILE ARG ILE ASP SER TYR GLN PRO ASP ALA SER SEQRES 25 A 451 GLY SER ASP TRP PHE CYS TYR HIS GLU LYS SER PRO CYS SEQRES 26 A 451 ILE PHE PRO ALA GLY PHE CYS SER VAL ASN ASN ILE SER SEQRES 27 A 451 VAL THR PRO PRO ASN GLY TYR ASP SER ARG THR PHE THR SEQRES 28 A 451 TRP GLU GLY TYR LEU ARG ASP THR GLY ALA VAL ALA ALA SEQRES 29 A 451 GLY GLN HIS LEU PHE HIS ARG ILE ILE PRO ASP HIS GLY SEQRES 30 A 451 PHE GLU VAL GLY MET SER LEU GLU CYS ALA ASP LEU MET SEQRES 31 A 451 ASP PRO ARG LEU VAL CYS VAL ALA THR VAL ALA ARG VAL SEQRES 32 A 451 VAL GLY ARG LEU LEU LYS VAL HIS PHE ASP GLY TRP THR SEQRES 33 A 451 ASP GLU TYR ASP GLN TRP LEU ASP CYS GLU SER ALA ASP SEQRES 34 A 451 ILE TYR PRO VAL GLY TRP CYS VAL LEU VAL ASN HIS LYS SEQRES 35 A 451 LEU GLU GLY PRO PRO ARG VAL ALA HIS SEQRES 1 B 135 GLY ALA MET ALA ASP ILE ASN THR GLU GLU SER GLY VAL SEQRES 2 B 135 VAL ASP LYS ASN SER PRO PHE LEU THR LEU GLY THR THR SEQRES 3 B 135 ILE LEU ASN SER ASN GLY LYS SER ARG ARG TRP GLU GLN SEQRES 4 B 135 LYS LEU VAL HIS ILE LYS THR MET GLU GLY GLU PHE SER SEQRES 5 B 135 VAL THR MET TRP ALA SER GLY ILE SER ASP ASP GLU TYR SEQRES 6 B 135 SER GLY SER ASP GLN ILE VAL GLY ALA SER ASP LEU LEU SEQRES 7 B 135 LYS GLY LYS GLU GLU PHE GLY ILE ASP GLY PHE THR SER SEQRES 8 B 135 GLN GLN ASN LYS GLU TYR GLN LYS MET GLU SER LYS PHE SEQRES 9 B 135 THR ASN ALA GLN THR LEU GLU MET PRO HIS PRO ILE SER SEQRES 10 B 135 SER VAL GLN ILE MET ASP HIS LEU ILE LYS GLU ARG GLY SEQRES 11 B 135 ASN LEU SER GLN GLU HELIX 1 1 TRP A 538 LYS A 544 1 7 HELIX 2 2 PRO A 551 PHE A 555 5 5 HELIX 3 3 VAL A 563 LEU A 567 5 5 HELIX 4 4 GLY A 635 ARG A 640 1 6 HELIX 5 5 ASP A 656 SER A 666 1 11 HELIX 6 6 TYR A 676 GLN A 684 1 9 HELIX 7 7 GLY A 741 GLY A 747 1 7 HELIX 8 8 PRO A 753 GLY A 763 1 11 HELIX 9 9 THR A 776 PHE A 780 5 5 HELIX 10 10 THR A 785 TYR A 789 5 5 HELIX 11 11 GLY A 859 ASN A 864 1 6 HELIX 12 12 THR A 880 GLY A 889 1 10 HELIX 13 13 GLY A 894 PHE A 898 5 5 HELIX 14 14 GLY A 963 VAL A 968 1 6 SHEET 1 AA 5 PHE A 622 ASN A 625 0 SHEET 2 AA 5 LYS A 607 TYR A 612 -1 O ALA A 608 N VAL A 624 SHEET 3 AA 5 PHE A 595 LYS A 604 -1 O THR A 599 N SER A 611 SHEET 4 AA 5 LYS A 572 GLU A 576 -1 O VAL A 573 N ALA A 598 SHEET 5 AA 5 VAL A 631 SER A 633 -1 O HIS A 632 N GLU A 574 SHEET 1 AB 4 GLY A 727 HIS A 731 0 SHEET 2 AB 4 ARG A 716 TYR A 721 -1 O LEU A 717 N CYS A 730 SHEET 3 AB 4 ARG A 700 VAL A 713 -1 O THR A 708 N ARG A 720 SHEET 4 AB 4 ASN A 749 ALA A 751 1 O ASN A 749 N VAL A 704 SHEET 1 AC 5 GLY A 727 HIS A 731 0 SHEET 2 AC 5 ARG A 716 TYR A 721 -1 O LEU A 717 N CYS A 730 SHEET 3 AC 5 ARG A 700 VAL A 713 -1 O THR A 708 N ARG A 720 SHEET 4 AC 5 ASN A 692 ASP A 697 -1 O LEU A 693 N ALA A 707 SHEET 5 AC 5 ILE A 737 HIS A 738 -1 O HIS A 738 N GLU A 694 SHEET 1 AD 2 ASN A 749 ALA A 751 0 SHEET 2 AD 2 ARG A 700 VAL A 713 1 O SER A 702 N ASN A 749 SHEET 1 AE 5 PHE A 846 HIS A 849 0 SHEET 2 AE 5 TYR A 828 ILE A 833 -1 O MET A 829 N TYR A 848 SHEET 3 AE 5 ILE A 815 VAL A 823 -1 O THR A 819 N ARG A 832 SHEET 4 AE 5 LYS A 803 VAL A 807 -1 O LEU A 804 N ALA A 818 SHEET 5 AE 5 ILE A 855 PHE A 856 -1 O PHE A 856 N GLU A 805 SHEET 1 AF 4 GLN A 950 ASP A 953 0 SHEET 2 AF 4 LEU A 936 PHE A 941 -1 O LEU A 937 N LEU A 952 SHEET 3 AF 4 VAL A 924 VAL A 933 -1 O THR A 928 N HIS A 940 SHEET 4 AF 4 LEU A 972 GLU A 973 1 O GLU A 973 N VAL A 926 SHEET 1 AG 5 GLN A 950 ASP A 953 0 SHEET 2 AG 5 LEU A 936 PHE A 941 -1 O LEU A 937 N LEU A 952 SHEET 3 AG 5 VAL A 924 VAL A 933 -1 O THR A 928 N HIS A 940 SHEET 4 AG 5 SER A 912 ALA A 916 -1 O LEU A 913 N ALA A 927 SHEET 5 AG 5 ILE A 959 TYR A 960 -1 O TYR A 960 N GLU A 914 SHEET 1 AH 2 LEU A 972 GLU A 973 0 SHEET 2 AH 2 VAL A 924 VAL A 933 1 O VAL A 924 N GLU A 973 SHEET 1 BA 2 TRP B 148 LYS B 156 0 SHEET 2 BA 2 GLU B 161 SER B 169 -1 O PHE B 162 N ILE B 155 CISPEP 1 MET B 158 GLU B 159 0 -2.60 CRYST1 120.780 120.780 153.020 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008280 0.004780 0.000000 0.00000 SCALE2 0.000000 0.009560 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006535 0.00000