HEADER TRANSCRIPTION 12-SEP-13 4C5I TITLE CRYSTAL STRUCTURE OF MBTD1 YY1 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MBT DOMAIN-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: 4MBT, RESIDUES 130-566; COMPND 5 SYNONYM: MBTD1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TRANSCRIPTIONAL REPRESSOR PROTEIN YY1; COMPND 9 CHAIN: C; COMPND 10 FRAGMENT: SPACER, RESIDUES 199-228; COMPND 11 SYNONYM: DELTA TRANSCRIPTION FACTOR, INO80 COMPLEX SUBUNIT S, NF-E1, COMPND 12 YIN AND YANG 1, YY-1, YY1; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606 KEYWDS TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.ALFIERI,S.GLATT,C.W.MUELLER REVDAT 2 20-DEC-23 4C5I 1 REMARK REVDAT 1 13-NOV-13 4C5I 0 JRNL AUTH C.ALFIERI,M.C.GAMBETTA,R.MATOS,S.GLATT,P.SEHR,S.FRATERMAN, JRNL AUTH 2 M.WILM,J.MUELLER,C.W.MUELLER JRNL TITL STRUCTURAL BASIS FOR TARGETING THE CHROMATIN REPRESSOR SFMBT JRNL TITL 2 TO POLYCOMB RESPONSE ELEMENTS JRNL REF GENES DEV. V. 27 2367 2013 JRNL REFN ISSN 0890-9369 JRNL PMID 24186981 JRNL DOI 10.1101/GAD.226621.113 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 31775 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1589 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8155 - 5.7486 0.97 2860 151 0.1917 0.1790 REMARK 3 2 5.7486 - 4.5639 0.99 2810 148 0.1753 0.1730 REMARK 3 3 4.5639 - 3.9873 0.99 2742 144 0.1700 0.2166 REMARK 3 4 3.9873 - 3.6229 1.00 2747 145 0.1929 0.2141 REMARK 3 5 3.6229 - 3.3633 1.00 2732 144 0.2065 0.2371 REMARK 3 6 3.3633 - 3.1650 1.00 2751 145 0.2315 0.2499 REMARK 3 7 3.1650 - 3.0065 1.00 2726 143 0.2504 0.3075 REMARK 3 8 3.0065 - 2.8757 1.00 2722 143 0.2656 0.2767 REMARK 3 9 2.8757 - 2.7650 1.00 2713 142 0.2767 0.3083 REMARK 3 10 2.7650 - 2.6696 1.00 2720 144 0.3019 0.3188 REMARK 3 11 2.6696 - 2.5861 0.98 2663 140 0.3218 0.3961 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7025 REMARK 3 ANGLE : 0.632 9548 REMARK 3 CHIRALITY : 0.045 1010 REMARK 3 PLANARITY : 0.003 1222 REMARK 3 DIHEDRAL : 11.189 2529 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4C5I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1290058311. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93432 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31789 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 2.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.98000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3FEO REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.18000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.76000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.35500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.76000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.18000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.35500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 127 REMARK 465 ALA A 128 REMARK 465 MET A 129 REMARK 465 ALA A 130 REMARK 465 LYS A 131 REMARK 465 THR A 132 REMARK 465 LYS A 133 REMARK 465 ALA A 134 REMARK 465 ILE A 356 REMARK 465 THR A 357 REMARK 465 LYS A 358 REMARK 465 LYS A 359 REMARK 465 GLN A 360 REMARK 465 GLN A 563 REMARK 465 SER A 564 REMARK 465 SER A 565 REMARK 465 ARG A 566 REMARK 465 GLY B 127 REMARK 465 ALA B 128 REMARK 465 MET B 129 REMARK 465 ALA B 130 REMARK 465 LYS B 131 REMARK 465 THR B 132 REMARK 465 LYS B 133 REMARK 465 ALA B 134 REMARK 465 ALA B 135 REMARK 465 VAL B 136 REMARK 465 SER B 137 REMARK 465 MET B 138 REMARK 465 GLU B 139 REMARK 465 SER B 354 REMARK 465 ASP B 355 REMARK 465 ILE B 356 REMARK 465 THR B 357 REMARK 465 LYS B 358 REMARK 465 LYS B 359 REMARK 465 GLN B 360 REMARK 465 ASP B 361 REMARK 465 GLN B 563 REMARK 465 SER B 564 REMARK 465 SER B 565 REMARK 465 ARG B 566 REMARK 465 ASP C 199 REMARK 465 PRO C 200 REMARK 465 GLY C 201 REMARK 465 ASN C 202 REMARK 465 LYS C 203 REMARK 465 LYS C 204 REMARK 465 TRP C 205 REMARK 465 LEU C 215 REMARK 465 GLU C 216 REMARK 465 GLY C 217 REMARK 465 GLU C 218 REMARK 465 SER C 226 REMARK 465 ASP C 227 REMARK 465 GLU C 228 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA A 257 CB REMARK 470 ILE A 347 CD1 REMARK 470 ILE A 406 CD1 REMARK 470 ILE A 448 CD1 REMARK 470 MET A 450 CE REMARK 470 ALA B 257 CB REMARK 470 ILE B 347 CD1 REMARK 470 GLU B 382 CG CD OE1 OE2 REMARK 470 ILE B 406 CD1 REMARK 470 ILE B 448 CD1 REMARK 470 MET B 450 CE REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 137 OG REMARK 480 GLU A 139 OE1 OE2 REMARK 480 CYS A 168 SG REMARK 480 ASP A 171 CG OD1 OD2 REMARK 480 ILE A 172 CD1 REMARK 480 SER A 186 OG REMARK 480 LEU A 187 CD1 REMARK 480 PRO A 188 CG CD REMARK 480 THR A 189 OG1 CG2 REMARK 480 LYS A 190 CG CD CE NZ REMARK 480 PHE A 192 CG CD1 CE1 REMARK 480 SER A 238 OG REMARK 480 LYS A 240 CG CD CE NZ REMARK 480 LYS A 256 CG CD CE NZ REMARK 480 LYS A 267 CG CD CE NZ REMARK 480 PRO A 271 CG CD REMARK 480 ASP A 272 CG OD1 OD2 REMARK 480 GLN A 275 CG CD OE1 NE2 REMARK 480 SER A 278 OG REMARK 480 GLN A 282 CG CD OE1 NE2 REMARK 480 GLU A 323 CG CD OE1 OE2 REMARK 480 LYS A 352 CG CD CE NZ REMARK 480 ARG A 353 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 361 CG OD1 OD2 REMARK 480 LYS A 373 CG CD CE NZ REMARK 480 GLU A 382 CG CD OE1 OE2 REMARK 480 ARG A 471 CG CD NE CZ NH1 NH2 REMARK 480 SER A 562 OG REMARK 480 LYS B 161 CG CD CE NZ REMARK 480 ASP B 171 CG OD1 OD2 REMARK 480 SER B 186 OG REMARK 480 LEU B 187 CG CD1 CD2 REMARK 480 PRO B 188 CG CD REMARK 480 SER B 227 OG REMARK 480 LYS B 256 CG CD CE NZ REMARK 480 GLN B 275 OE1 NE2 REMARK 480 LYS B 296 CG CD CE NZ REMARK 480 GLU B 323 CG CD OE1 OE2 REMARK 480 ARG B 350 NE CZ NH1 NH2 REMARK 480 ARG B 353 CD NE CZ NH1 NH2 REMARK 480 LYS B 373 CG CD CE NZ REMARK 480 LYS B 375 CG CD CE NZ REMARK 480 GLU B 376 CG CD OE1 OE2 REMARK 480 LYS B 408 CG CD CE NZ REMARK 480 ASP B 426 OD1 REMARK 480 PHE B 431 CD1 CE1 CZ REMARK 480 ARG B 457 CG CD NE CZ NH1 NH2 REMARK 480 GLU B 472 OE2 REMARK 480 LYS B 481 CG CD CE NZ REMARK 480 GLN B 556 CG CD OE1 NE2 REMARK 480 GLU C 206 CG CD OE1 OE2 REMARK 480 GLN C 207 CG CD OE1 NE2 REMARK 480 LYS C 208 CG CD CE NZ REMARK 480 GLN C 209 CG CD OE1 NE2 REMARK 480 VAL C 210 CG1 CG2 REMARK 480 LYS C 213 CG CD CE NZ REMARK 480 SER C 220 OG REMARK 480 VAL C 221 CG1 CG2 REMARK 480 THR C 222 OG1 CG2 REMARK 480 TRP C 224 CE3 CZ2 CZ3 CH2 REMARK 480 SER C 225 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 139 CB ALA B 236 4446 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 168 56.50 -118.02 REMARK 500 GLU A 213 -104.23 58.02 REMARK 500 HIS A 298 74.01 -151.28 REMARK 500 ASP A 327 106.39 -59.24 REMARK 500 HIS A 334 33.74 -93.44 REMARK 500 GLU A 505 75.08 -151.27 REMARK 500 HIS A 519 -97.40 56.99 REMARK 500 ASN B 175 -4.17 70.41 REMARK 500 ASP B 184 52.46 -90.31 REMARK 500 GLU B 213 -105.56 58.52 REMARK 500 THR B 268 -169.21 -128.92 REMARK 500 ASN B 397 85.25 -161.18 REMARK 500 LYS B 461 71.02 -66.37 REMARK 500 HIS B 519 -103.62 59.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C5E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MINIMAL PHO-SFMBT COMPLEX ( P21 SPACEGROUP) REMARK 900 RELATED ID: 4C5G RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MINIMAL PHO SFMBT COMPLEX REMARK 900 RELATED ID: 4C5H RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MINIMAL PHO-SFMBT COMPLEX DBREF 4C5I A 130 566 UNP Q05BQ5 MBTD1_HUMAN 130 566 DBREF 4C5I B 130 566 UNP Q05BQ5 MBTD1_HUMAN 130 566 DBREF 4C5I C 199 228 UNP P25490 TYY1_HUMAN 199 228 SEQADV 4C5I GLY A 127 UNP Q05BQ5 EXPRESSION TAG SEQADV 4C5I ALA A 128 UNP Q05BQ5 EXPRESSION TAG SEQADV 4C5I MET A 129 UNP Q05BQ5 EXPRESSION TAG SEQADV 4C5I GLY B 127 UNP Q05BQ5 EXPRESSION TAG SEQADV 4C5I ALA B 128 UNP Q05BQ5 EXPRESSION TAG SEQADV 4C5I MET B 129 UNP Q05BQ5 EXPRESSION TAG SEQRES 1 A 440 GLY ALA MET ALA LYS THR LYS ALA ALA VAL SER MET GLU SEQRES 2 A 440 GLY PHE SER TRP GLY ASN TYR ILE ASN SER ASN SER PHE SEQRES 3 A 440 ILE ALA ALA PRO VAL THR CYS PHE LYS HIS ALA PRO MET SEQRES 4 A 440 GLY THR CYS TRP GLY ASP ILE SER GLU ASN VAL ARG VAL SEQRES 5 A 440 GLU VAL PRO ASN THR ASP CYS SER LEU PRO THR LYS VAL SEQRES 6 A 440 PHE TRP ILE ALA GLY ILE VAL LYS LEU ALA GLY TYR ASN SEQRES 7 A 440 ALA LEU LEU ARG TYR GLU GLY PHE GLU ASN ASP SER GLY SEQRES 8 A 440 LEU ASP PHE TRP CYS ASN ILE CYS GLY SER ASP ILE HIS SEQRES 9 A 440 PRO VAL GLY TRP CYS ALA ALA SER GLY LYS PRO LEU VAL SEQRES 10 A 440 PRO PRO ARG THR ILE GLN HIS LYS TYR THR ASN TRP LYS SEQRES 11 A 440 ALA PHE LEU VAL LYS ARG LEU THR GLY ALA LYS THR LEU SEQRES 12 A 440 PRO PRO ASP PHE SER GLN LYS VAL SER GLU SER MET GLN SEQRES 13 A 440 TYR PRO PHE LYS PRO CYS MET ARG VAL GLU VAL VAL ASP SEQRES 14 A 440 LYS ARG HIS LEU CYS ARG THR ARG VAL ALA VAL VAL GLU SEQRES 15 A 440 SER VAL ILE GLY GLY ARG LEU ARG LEU VAL TYR GLU GLU SEQRES 16 A 440 SER GLU ASP ARG THR ASP ASP PHE TRP CYS HIS MET HIS SEQRES 17 A 440 SER PRO LEU ILE HIS HIS ILE GLY TRP SER ARG SER ILE SEQRES 18 A 440 GLY HIS ARG PHE LYS ARG SER ASP ILE THR LYS LYS GLN SEQRES 19 A 440 ASP GLY HIS PHE ASP THR PRO PRO HIS LEU PHE ALA LYS SEQRES 20 A 440 VAL LYS GLU VAL ASP GLN SER GLY GLU TRP PHE LYS GLU SEQRES 21 A 440 GLY MET LYS LEU GLU ALA ILE ASP PRO LEU ASN LEU SER SEQRES 22 A 440 THR ILE CYS VAL ALA THR ILE ARG LYS VAL LEU ALA ASP SEQRES 23 A 440 GLY PHE LEU MET ILE GLY ILE ASP GLY SER GLU ALA ALA SEQRES 24 A 440 ASP GLY SER ASP TRP PHE CYS TYR HIS ALA THR SER PRO SEQRES 25 A 440 SER ILE PHE PRO VAL GLY PHE CYS GLU ILE ASN MET ILE SEQRES 26 A 440 GLU LEU THR PRO PRO ARG GLY TYR THR LYS LEU PRO PHE SEQRES 27 A 440 LYS TRP PHE ASP TYR LEU ARG GLU THR GLY SER ILE ALA SEQRES 28 A 440 ALA PRO VAL LYS LEU PHE ASN LYS ASP VAL PRO ASN HIS SEQRES 29 A 440 GLY PHE ARG VAL GLY MET LYS LEU GLU ALA VAL ASP LEU SEQRES 30 A 440 MET GLU PRO ARG LEU ILE CYS VAL ALA THR VAL THR ARG SEQRES 31 A 440 ILE ILE HIS ARG LEU LEU ARG ILE HIS PHE ASP GLY TRP SEQRES 32 A 440 GLU GLU GLU TYR ASP GLN TRP VAL ASP CYS GLU SER PRO SEQRES 33 A 440 ASP LEU TYR PRO VAL GLY TRP CYS GLN LEU THR GLY TYR SEQRES 34 A 440 GLN LEU GLN PRO PRO ALA SER GLN SER SER ARG SEQRES 1 B 440 GLY ALA MET ALA LYS THR LYS ALA ALA VAL SER MET GLU SEQRES 2 B 440 GLY PHE SER TRP GLY ASN TYR ILE ASN SER ASN SER PHE SEQRES 3 B 440 ILE ALA ALA PRO VAL THR CYS PHE LYS HIS ALA PRO MET SEQRES 4 B 440 GLY THR CYS TRP GLY ASP ILE SER GLU ASN VAL ARG VAL SEQRES 5 B 440 GLU VAL PRO ASN THR ASP CYS SER LEU PRO THR LYS VAL SEQRES 6 B 440 PHE TRP ILE ALA GLY ILE VAL LYS LEU ALA GLY TYR ASN SEQRES 7 B 440 ALA LEU LEU ARG TYR GLU GLY PHE GLU ASN ASP SER GLY SEQRES 8 B 440 LEU ASP PHE TRP CYS ASN ILE CYS GLY SER ASP ILE HIS SEQRES 9 B 440 PRO VAL GLY TRP CYS ALA ALA SER GLY LYS PRO LEU VAL SEQRES 10 B 440 PRO PRO ARG THR ILE GLN HIS LYS TYR THR ASN TRP LYS SEQRES 11 B 440 ALA PHE LEU VAL LYS ARG LEU THR GLY ALA LYS THR LEU SEQRES 12 B 440 PRO PRO ASP PHE SER GLN LYS VAL SER GLU SER MET GLN SEQRES 13 B 440 TYR PRO PHE LYS PRO CYS MET ARG VAL GLU VAL VAL ASP SEQRES 14 B 440 LYS ARG HIS LEU CYS ARG THR ARG VAL ALA VAL VAL GLU SEQRES 15 B 440 SER VAL ILE GLY GLY ARG LEU ARG LEU VAL TYR GLU GLU SEQRES 16 B 440 SER GLU ASP ARG THR ASP ASP PHE TRP CYS HIS MET HIS SEQRES 17 B 440 SER PRO LEU ILE HIS HIS ILE GLY TRP SER ARG SER ILE SEQRES 18 B 440 GLY HIS ARG PHE LYS ARG SER ASP ILE THR LYS LYS GLN SEQRES 19 B 440 ASP GLY HIS PHE ASP THR PRO PRO HIS LEU PHE ALA LYS SEQRES 20 B 440 VAL LYS GLU VAL ASP GLN SER GLY GLU TRP PHE LYS GLU SEQRES 21 B 440 GLY MET LYS LEU GLU ALA ILE ASP PRO LEU ASN LEU SER SEQRES 22 B 440 THR ILE CYS VAL ALA THR ILE ARG LYS VAL LEU ALA ASP SEQRES 23 B 440 GLY PHE LEU MET ILE GLY ILE ASP GLY SER GLU ALA ALA SEQRES 24 B 440 ASP GLY SER ASP TRP PHE CYS TYR HIS ALA THR SER PRO SEQRES 25 B 440 SER ILE PHE PRO VAL GLY PHE CYS GLU ILE ASN MET ILE SEQRES 26 B 440 GLU LEU THR PRO PRO ARG GLY TYR THR LYS LEU PRO PHE SEQRES 27 B 440 LYS TRP PHE ASP TYR LEU ARG GLU THR GLY SER ILE ALA SEQRES 28 B 440 ALA PRO VAL LYS LEU PHE ASN LYS ASP VAL PRO ASN HIS SEQRES 29 B 440 GLY PHE ARG VAL GLY MET LYS LEU GLU ALA VAL ASP LEU SEQRES 30 B 440 MET GLU PRO ARG LEU ILE CYS VAL ALA THR VAL THR ARG SEQRES 31 B 440 ILE ILE HIS ARG LEU LEU ARG ILE HIS PHE ASP GLY TRP SEQRES 32 B 440 GLU GLU GLU TYR ASP GLN TRP VAL ASP CYS GLU SER PRO SEQRES 33 B 440 ASP LEU TYR PRO VAL GLY TRP CYS GLN LEU THR GLY TYR SEQRES 34 B 440 GLN LEU GLN PRO PRO ALA SER GLN SER SER ARG SEQRES 1 C 30 ASP PRO GLY ASN LYS LYS TRP GLU GLN LYS GLN VAL GLN SEQRES 2 C 30 ILE LYS THR LEU GLU GLY GLU PHE SER VAL THR MET TRP SEQRES 3 C 30 SER SER ASP GLU FORMUL 4 HOH *88(H2 O) HELIX 1 1 SER A 142 SER A 151 1 10 HELIX 2 2 PRO A 156 PHE A 160 5 5 HELIX 3 3 GLY A 233 SER A 238 1 6 HELIX 4 4 PRO A 245 GLN A 249 5 5 HELIX 5 5 ASN A 254 THR A 264 1 11 HELIX 6 6 ASP A 272 MET A 281 1 10 HELIX 7 7 GLY A 342 GLY A 348 1 7 HELIX 8 8 PRO A 367 PHE A 371 5 5 HELIX 9 9 GLY A 444 ASN A 449 1 6 HELIX 10 10 LYS A 465 THR A 473 1 9 HELIX 11 11 PRO A 479 ASN A 484 5 6 HELIX 12 12 GLU A 530 ASP A 534 5 5 HELIX 13 13 GLY A 548 GLY A 554 1 7 HELIX 14 14 SER B 142 SER B 151 1 10 HELIX 15 15 PRO B 156 PHE B 160 5 5 HELIX 16 16 GLY B 233 GLY B 239 1 7 HELIX 17 17 PRO B 245 GLN B 249 5 5 HELIX 18 18 ASN B 254 THR B 264 1 11 HELIX 19 19 ASP B 272 MET B 281 1 10 HELIX 20 20 GLY B 342 GLY B 348 1 7 HELIX 21 21 PRO B 367 PHE B 371 5 5 HELIX 22 22 GLY B 444 ASN B 449 1 6 HELIX 23 23 LYS B 465 GLY B 474 1 10 HELIX 24 24 PRO B 479 ASN B 484 5 6 HELIX 25 25 GLU B 530 ASP B 534 5 5 HELIX 26 26 GLY B 548 GLY B 554 1 7 SHEET 1 AA 4 ARG A 177 PRO A 181 0 SHEET 2 AA 4 PHE A 192 ALA A 201 -1 O TRP A 193 N VAL A 180 SHEET 3 AA 4 ASN A 204 TYR A 209 -1 O ASN A 204 N ALA A 201 SHEET 4 AA 4 PHE A 220 ASN A 223 -1 O PHE A 220 N LEU A 207 SHEET 1 AB 4 ASP A 328 HIS A 332 0 SHEET 2 AB 4 ARG A 314 TYR A 319 -1 O LEU A 315 N CYS A 331 SHEET 3 AB 4 HIS A 298 ILE A 311 -1 O VAL A 306 N VAL A 318 SHEET 4 AB 4 ARG A 350 PHE A 351 1 O ARG A 350 N THR A 302 SHEET 1 AC 5 ASP A 328 HIS A 332 0 SHEET 2 AC 5 ARG A 314 TYR A 319 -1 O LEU A 315 N CYS A 331 SHEET 3 AC 5 HIS A 298 ILE A 311 -1 O VAL A 306 N VAL A 318 SHEET 4 AC 5 MET A 289 ASP A 295 -1 O MET A 289 N VAL A 307 SHEET 5 AC 5 ILE A 338 HIS A 339 -1 O HIS A 339 N GLU A 292 SHEET 1 AD 2 ARG A 350 PHE A 351 0 SHEET 2 AD 2 HIS A 298 ILE A 311 1 O CYS A 300 N ARG A 350 SHEET 1 AE 5 ASP A 328 HIS A 332 0 SHEET 2 AE 5 ARG A 314 TYR A 319 -1 O LEU A 315 N CYS A 331 SHEET 3 AE 5 HIS A 298 ILE A 311 -1 O VAL A 306 N VAL A 318 SHEET 4 AE 5 MET A 289 ASP A 295 -1 O MET A 289 N VAL A 307 SHEET 5 AE 5 PHE A 364 ASP A 365 1 O PHE A 364 N ARG A 290 SHEET 1 AF 4 PHE A 431 HIS A 434 0 SHEET 2 AF 4 PHE A 414 ILE A 419 -1 O LEU A 415 N TYR A 433 SHEET 3 AF 4 ASN A 397 VAL A 409 -1 O THR A 405 N GLY A 418 SHEET 4 AF 4 LEU A 453 THR A 454 1 O THR A 454 N VAL A 403 SHEET 1 AG 5 PHE A 431 HIS A 434 0 SHEET 2 AG 5 PHE A 414 ILE A 419 -1 O LEU A 415 N TYR A 433 SHEET 3 AG 5 ASN A 397 VAL A 409 -1 O THR A 405 N GLY A 418 SHEET 4 AG 5 LYS A 389 ASP A 394 -1 O LEU A 390 N ALA A 404 SHEET 5 AG 5 ILE A 440 PHE A 441 -1 O PHE A 441 N GLU A 391 SHEET 1 AH 2 LEU A 453 THR A 454 0 SHEET 2 AH 2 ASN A 397 VAL A 409 1 O ILE A 401 N THR A 454 SHEET 1 AI 5 GLN A 535 ASP A 538 0 SHEET 2 AI 5 LEU A 521 PHE A 526 -1 O LEU A 522 N VAL A 537 SHEET 3 AI 5 ILE A 509 ILE A 518 -1 O THR A 513 N HIS A 525 SHEET 4 AI 5 LYS A 497 VAL A 501 -1 O LEU A 498 N ALA A 512 SHEET 5 AI 5 LEU A 544 TYR A 545 -1 O TYR A 545 N GLU A 499 SHEET 1 BA 5 PHE B 220 ASN B 223 0 SHEET 2 BA 5 ASN B 204 TYR B 209 -1 O ALA B 205 N CYS B 222 SHEET 3 BA 5 PHE B 192 ALA B 201 -1 O GLY B 196 N ARG B 208 SHEET 4 BA 5 ARG B 177 PRO B 181 -1 O VAL B 178 N ALA B 195 SHEET 5 BA 5 HIS B 230 PRO B 231 -1 O HIS B 230 N GLU B 179 SHEET 1 BB 4 ASP B 328 HIS B 332 0 SHEET 2 BB 4 ARG B 314 TYR B 319 -1 O LEU B 315 N CYS B 331 SHEET 3 BB 4 ARG B 301 ILE B 311 -1 O VAL B 306 N VAL B 318 SHEET 4 BB 4 ARG B 350 PHE B 351 1 O ARG B 350 N THR B 302 SHEET 1 BC 5 ASP B 328 HIS B 332 0 SHEET 2 BC 5 ARG B 314 TYR B 319 -1 O LEU B 315 N CYS B 331 SHEET 3 BC 5 ARG B 301 ILE B 311 -1 O VAL B 306 N VAL B 318 SHEET 4 BC 5 MET B 289 VAL B 294 -1 O MET B 289 N VAL B 307 SHEET 5 BC 5 ILE B 338 HIS B 339 -1 O HIS B 339 N GLU B 292 SHEET 1 BD 2 ARG B 350 PHE B 351 0 SHEET 2 BD 2 ARG B 301 ILE B 311 1 N THR B 302 O ARG B 350 SHEET 1 BE 5 ASP B 328 HIS B 332 0 SHEET 2 BE 5 ARG B 314 TYR B 319 -1 O LEU B 315 N CYS B 331 SHEET 3 BE 5 ARG B 301 ILE B 311 -1 O VAL B 306 N VAL B 318 SHEET 4 BE 5 MET B 289 VAL B 294 -1 O MET B 289 N VAL B 307 SHEET 5 BE 5 PHE B 364 ASP B 365 1 O PHE B 364 N ARG B 290 SHEET 1 BF 4 PHE B 431 HIS B 434 0 SHEET 2 BF 4 PHE B 414 ILE B 419 -1 O LEU B 415 N TYR B 433 SHEET 3 BF 4 ASN B 397 VAL B 409 -1 O THR B 405 N GLY B 418 SHEET 4 BF 4 LEU B 453 THR B 454 1 O THR B 454 N VAL B 403 SHEET 1 BG 5 PHE B 431 HIS B 434 0 SHEET 2 BG 5 PHE B 414 ILE B 419 -1 O LEU B 415 N TYR B 433 SHEET 3 BG 5 ASN B 397 VAL B 409 -1 O THR B 405 N GLY B 418 SHEET 4 BG 5 LYS B 389 ASP B 394 -1 O LEU B 390 N ALA B 404 SHEET 5 BG 5 ILE B 440 PHE B 441 -1 O PHE B 441 N GLU B 391 SHEET 1 BH 2 LEU B 453 THR B 454 0 SHEET 2 BH 2 ASN B 397 VAL B 409 1 O ILE B 401 N THR B 454 SHEET 1 BI 5 GLN B 535 ASP B 538 0 SHEET 2 BI 5 LEU B 521 PHE B 526 -1 O LEU B 522 N VAL B 537 SHEET 3 BI 5 ILE B 509 ILE B 518 -1 O THR B 513 N HIS B 525 SHEET 4 BI 5 LYS B 497 VAL B 501 -1 O LEU B 498 N ALA B 512 SHEET 5 BI 5 LEU B 544 TYR B 545 -1 O TYR B 545 N GLU B 499 SHEET 1 CA 2 GLN C 207 GLN C 211 0 SHEET 2 CA 2 SER C 220 TRP C 224 -1 O VAL C 221 N VAL C 210 CISPEP 1 LEU A 462 PRO A 463 0 0.27 CISPEP 2 LEU B 462 PRO B 463 0 2.69 CRYST1 70.360 104.710 135.520 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014213 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009550 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007379 0.00000