HEADER HYDROLASE/RNA 02-OCT-13 4C9D TITLE CAS6 (TTHB231) PRODUCT COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAS6B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: R3 REPEAT RNA CLEAVAGE PRODUCT; COMPND 7 CHAIN: C, D; COMPND 8 FRAGMENT: REPEAT STEM-LOOP; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: R3 REPEAT RNA CLEAVAGE PRODUCT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS HB8; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 ATCC: 27634; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEC-K-MBP; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS HB8; SOURCE 14 ORGANISM_TAXID: 300852 KEYWDS HYDROLASE-RNA COMPLEX, CRISPR, RNA PROCESSING RIBONUCLEASE EXPDTA X-RAY DIFFRACTION AUTHOR M.JINEK,O.NIEWOEHNER,J.A.DOUDNA REVDAT 3 20-DEC-23 4C9D 1 LINK REVDAT 2 01-MAR-17 4C9D 1 JRNL REVDAT 1 06-NOV-13 4C9D 0 JRNL AUTH O.NIEWOEHNER,M.JINEK,J.A.DOUDNA JRNL TITL EVOLUTION OF CRISPR RNA RECOGNITION AND PROCESSING BY CAS6 JRNL TITL 2 ENDONUCLEASES. JRNL REF NUCLEIC ACIDS RES. V. 42 1341 2014 JRNL REFN ESSN 1362-4962 JRNL PMID 24150936 JRNL DOI 10.1093/NAR/GKT922 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 18676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 935 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 73.1044 - 5.7382 0.99 2725 145 0.2423 0.2625 REMARK 3 2 5.7382 - 4.5548 1.00 2573 135 0.2011 0.2536 REMARK 3 3 4.5548 - 3.9791 1.00 2521 132 0.2091 0.2990 REMARK 3 4 3.9791 - 3.6153 1.00 2508 132 0.2471 0.3016 REMARK 3 5 3.6153 - 3.3561 1.00 2495 132 0.2768 0.3198 REMARK 3 6 3.3561 - 3.1583 1.00 2473 130 0.2933 0.3172 REMARK 3 7 3.1583 - 3.0001 1.00 2446 129 0.3296 0.3631 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.11 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 36.41 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.88570 REMARK 3 B22 (A**2) : 10.88570 REMARK 3 B33 (A**2) : -21.77150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4792 REMARK 3 ANGLE : 0.942 6639 REMARK 3 CHIRALITY : 0.048 743 REMARK 3 PLANARITY : 0.005 766 REMARK 3 DIHEDRAL : 15.921 1855 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 1:76) REMARK 3 ORIGIN FOR THE GROUP (A): 44.6402 76.8736 315.4710 REMARK 3 T TENSOR REMARK 3 T11: 0.3416 T22: 0.3379 REMARK 3 T33: 0.2577 T12: -0.0813 REMARK 3 T13: -0.0177 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 0.4647 L22: 0.3732 REMARK 3 L33: 0.4035 L12: 0.2923 REMARK 3 L13: -0.2699 L23: 0.0583 REMARK 3 S TENSOR REMARK 3 S11: -0.0635 S12: -0.1853 S13: 0.0292 REMARK 3 S21: -0.1408 S22: 0.0747 S23: -0.1089 REMARK 3 S31: -0.3595 S32: 0.3135 S33: 0.0048 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 77:91) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7245 75.1505 304.2045 REMARK 3 T TENSOR REMARK 3 T11: 0.6477 T22: 0.6399 REMARK 3 T33: 0.3490 T12: 0.0307 REMARK 3 T13: -0.1263 T23: -0.1562 REMARK 3 L TENSOR REMARK 3 L11: 0.1021 L22: 0.2116 REMARK 3 L33: 0.0513 L12: 0.0458 REMARK 3 L13: -0.0162 L23: 0.0841 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: 0.1341 S13: -0.1015 REMARK 3 S21: -0.1282 S22: 0.1363 S23: -0.1193 REMARK 3 S31: 0.0811 S32: 0.0273 S33: 0.1252 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 92:121) REMARK 3 ORIGIN FOR THE GROUP (A): 49.9672 70.2372 312.1150 REMARK 3 T TENSOR REMARK 3 T11: 0.4945 T22: 0.4550 REMARK 3 T33: 0.3081 T12: -0.0316 REMARK 3 T13: 0.0500 T23: -0.0565 REMARK 3 L TENSOR REMARK 3 L11: 0.2400 L22: 0.0849 REMARK 3 L33: 0.0392 L12: -0.1306 REMARK 3 L13: 0.0286 L23: -0.0375 REMARK 3 S TENSOR REMARK 3 S11: -0.0802 S12: -0.1049 S13: -0.3337 REMARK 3 S21: -0.0781 S22: 0.0277 S23: -0.0895 REMARK 3 S31: -0.0818 S32: 0.1231 S33: 0.0016 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 122:160) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9869 69.5339 328.3637 REMARK 3 T TENSOR REMARK 3 T11: 0.1767 T22: 0.4344 REMARK 3 T33: 0.2048 T12: -0.0336 REMARK 3 T13: 0.0268 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.5975 L22: 0.4683 REMARK 3 L33: 0.5333 L12: -0.0217 REMARK 3 L13: 0.3057 L23: -0.3286 REMARK 3 S TENSOR REMARK 3 S11: -0.0906 S12: 0.0346 S13: 0.1344 REMARK 3 S21: 0.1065 S22: 0.0986 S23: -0.1236 REMARK 3 S31: 0.0187 S32: -0.3586 S33: -0.2239 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 161:181) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3653 70.3305 320.9707 REMARK 3 T TENSOR REMARK 3 T11: 0.2846 T22: 0.6656 REMARK 3 T33: 0.4296 T12: -0.0690 REMARK 3 T13: -0.0586 T23: 0.1142 REMARK 3 L TENSOR REMARK 3 L11: 0.0288 L22: 0.3343 REMARK 3 L33: 0.0004 L12: -0.0827 REMARK 3 L13: -0.0016 L23: 0.0185 REMARK 3 S TENSOR REMARK 3 S11: 0.0370 S12: 0.2249 S13: -0.1584 REMARK 3 S21: -0.0373 S22: 0.0658 S23: 0.3207 REMARK 3 S31: -0.0649 S32: -0.1655 S33: 0.1064 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 182:231) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1006 68.1236 332.4504 REMARK 3 T TENSOR REMARK 3 T11: 0.0931 T22: 0.5347 REMARK 3 T33: 0.1701 T12: -0.0974 REMARK 3 T13: -0.0075 T23: -0.0490 REMARK 3 L TENSOR REMARK 3 L11: 0.2338 L22: 1.0439 REMARK 3 L33: 0.2780 L12: 0.2794 REMARK 3 L13: -0.0612 L23: 0.2604 REMARK 3 S TENSOR REMARK 3 S11: -0.0353 S12: -0.1307 S13: -0.0805 REMARK 3 S21: 0.0806 S22: 0.2799 S23: -0.3253 REMARK 3 S31: -0.0553 S32: 0.0832 S33: 0.7573 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 232:264) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9200 66.5847 322.8149 REMARK 3 T TENSOR REMARK 3 T11: 0.1438 T22: 0.4776 REMARK 3 T33: 0.2958 T12: -0.1154 REMARK 3 T13: 0.0079 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 0.0987 L22: 0.0790 REMARK 3 L33: 0.3246 L12: 0.0842 REMARK 3 L13: -0.0760 L23: -0.0395 REMARK 3 S TENSOR REMARK 3 S11: -0.0991 S12: 0.2474 S13: -0.1063 REMARK 3 S21: -0.1321 S22: 0.0487 S23: 0.1020 REMARK 3 S31: 0.0891 S32: -0.3813 S33: -0.0674 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESSEQ -1:17) REMARK 3 ORIGIN FOR THE GROUP (A): 34.4003 55.4291 368.1208 REMARK 3 T TENSOR REMARK 3 T11: 0.2832 T22: 0.4725 REMARK 3 T33: 0.2720 T12: -0.0090 REMARK 3 T13: -0.0176 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.2728 L22: 0.1056 REMARK 3 L33: 0.0575 L12: 0.1362 REMARK 3 L13: -0.1056 L23: -0.0797 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: 0.0612 S13: 0.1045 REMARK 3 S21: -0.0149 S22: -0.0816 S23: 0.2507 REMARK 3 S31: 0.1011 S32: -0.0945 S33: -0.0071 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 18:33) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2126 53.2771 368.9752 REMARK 3 T TENSOR REMARK 3 T11: 0.1470 T22: 0.3674 REMARK 3 T33: 0.3259 T12: -0.0147 REMARK 3 T13: 0.0598 T23: -0.1066 REMARK 3 L TENSOR REMARK 3 L11: 0.0038 L22: 0.0085 REMARK 3 L33: 0.0186 L12: -0.0057 REMARK 3 L13: -0.0063 L23: -0.0106 REMARK 3 S TENSOR REMARK 3 S11: 0.0812 S12: 0.0170 S13: 0.1447 REMARK 3 S21: 0.0101 S22: -0.1898 S23: 0.0858 REMARK 3 S31: 0.0429 S32: -0.0780 S33: -0.0028 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 34:74) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2218 59.2237 365.5720 REMARK 3 T TENSOR REMARK 3 T11: 0.2687 T22: 0.6775 REMARK 3 T33: 0.3798 T12: 0.0331 REMARK 3 T13: 0.0930 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 0.0570 L22: 0.4193 REMARK 3 L33: 0.4327 L12: -0.0434 REMARK 3 L13: 0.1041 L23: -0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: -0.0225 S13: 0.0726 REMARK 3 S21: 0.0584 S22: 0.0010 S23: 0.0863 REMARK 3 S31: 0.1230 S32: -0.3743 S33: 0.1008 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 75:121) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0781 58.8723 373.6254 REMARK 3 T TENSOR REMARK 3 T11: 0.1820 T22: 0.6255 REMARK 3 T33: 0.1536 T12: 0.0347 REMARK 3 T13: 0.0667 T23: -0.0917 REMARK 3 L TENSOR REMARK 3 L11: 1.2355 L22: 0.6464 REMARK 3 L33: 0.2179 L12: -0.7045 REMARK 3 L13: -0.4791 L23: 0.2850 REMARK 3 S TENSOR REMARK 3 S11: -0.1603 S12: -0.1898 S13: -0.3248 REMARK 3 S21: 0.1891 S22: 0.0603 S23: 0.1943 REMARK 3 S31: 0.2274 S32: 0.0178 S33: 0.2699 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 122:181) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4866 73.8455 354.2383 REMARK 3 T TENSOR REMARK 3 T11: 0.2966 T22: 0.5382 REMARK 3 T33: 0.3912 T12: 0.1438 REMARK 3 T13: 0.0428 T23: -0.0610 REMARK 3 L TENSOR REMARK 3 L11: 0.2348 L22: 0.3972 REMARK 3 L33: 0.3130 L12: 0.0591 REMARK 3 L13: 0.0744 L23: -0.3119 REMARK 3 S TENSOR REMARK 3 S11: -0.0772 S12: -0.0986 S13: 0.0333 REMARK 3 S21: 0.2486 S22: 0.0490 S23: 0.2031 REMARK 3 S31: -0.3804 S32: -0.4300 S33: 0.0948 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 182:264) REMARK 3 ORIGIN FOR THE GROUP (A): 30.0603 73.3239 351.9003 REMARK 3 T TENSOR REMARK 3 T11: -0.1680 T22: 0.1609 REMARK 3 T33: 0.2124 T12: 0.2735 REMARK 3 T13: 0.1759 T23: -0.1337 REMARK 3 L TENSOR REMARK 3 L11: 0.5128 L22: 0.0565 REMARK 3 L33: 0.5239 L12: -0.0672 REMARK 3 L13: -0.2574 L23: 0.0955 REMARK 3 S TENSOR REMARK 3 S11: 0.1402 S12: -0.1578 S13: 0.2014 REMARK 3 S21: 0.0794 S22: -0.0551 S23: -0.0754 REMARK 3 S31: -0.4054 S32: -0.1619 S33: -0.3801 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN C AND (RESSEQ 16:23) REMARK 3 ORIGIN FOR THE GROUP (A): 30.2582 90.8605 330.0501 REMARK 3 T TENSOR REMARK 3 T11: 0.8691 T22: 0.3468 REMARK 3 T33: 0.6063 T12: 0.2426 REMARK 3 T13: 0.2589 T23: 0.1798 REMARK 3 L TENSOR REMARK 3 L11: 0.2651 L22: 1.0901 REMARK 3 L33: 0.2913 L12: 0.1590 REMARK 3 L13: -0.0856 L23: 0.4176 REMARK 3 S TENSOR REMARK 3 S11: 0.0183 S12: -0.0558 S13: -0.0569 REMARK 3 S21: 0.1025 S22: 0.0343 S23: -0.4862 REMARK 3 S31: -0.1878 S32: 0.0409 S33: 0.1406 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN C AND (RESSEQ 24:29) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9022 83.5968 326.1277 REMARK 3 T TENSOR REMARK 3 T11: 0.4413 T22: 0.4061 REMARK 3 T33: 0.5963 T12: 0.0875 REMARK 3 T13: 0.1470 T23: 0.0747 REMARK 3 L TENSOR REMARK 3 L11: 0.1911 L22: 0.2523 REMARK 3 L33: 0.1546 L12: -0.2181 REMARK 3 L13: -0.0828 L23: 0.1024 REMARK 3 S TENSOR REMARK 3 S11: 0.0445 S12: -0.0517 S13: 0.2667 REMARK 3 S21: -0.0031 S22: 0.1479 S23: -0.2192 REMARK 3 S31: -0.3274 S32: 0.0237 S33: 0.0167 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN D AND (RESSEQ 16:29) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3503 59.8611 350.7040 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.9814 REMARK 3 T33: 0.3577 T12: 0.1571 REMARK 3 T13: -0.0059 T23: -0.0844 REMARK 3 L TENSOR REMARK 3 L11: 1.3536 L22: 0.2183 REMARK 3 L33: 0.3733 L12: 0.5208 REMARK 3 L13: -0.0871 L23: -0.1298 REMARK 3 S TENSOR REMARK 3 S11: 0.0137 S12: 0.1458 S13: -0.2979 REMARK 3 S21: -0.0344 S22: -0.1126 S23: -0.2168 REMARK 3 S31: 0.1227 S32: -0.1432 S33: -0.2304 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4C9D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1290058609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99994 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18676 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 73.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.78000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4C98 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS (PH 8.5), 13% (W/V) PEG 65 REMARK 280 20000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 154.39000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.61000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.61000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 231.58500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.61000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.61000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 77.19500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.61000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.61000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 231.58500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.61000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.61000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.19500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 154.39000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 ARG A 56 REMARK 465 ALA A 57 REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 ALA B 57 REMARK 465 GLY B 58 REMARK 465 PRO B 59 REMARK 465 GLU B 60 REMARK 465 GLY B 61 REMARK 465 ALA B 62 REMARK 465 G C 0 REMARK 465 G C 1 REMARK 465 U C 2 REMARK 465 U C 3 REMARK 465 G C 4 REMARK 465 C C 5 REMARK 465 A C 6 REMARK 465 A C 7 REMARK 465 A C 8 REMARK 465 C C 9 REMARK 465 C C 10 REMARK 465 U C 11 REMARK 465 C C 12 REMARK 465 G C 13 REMARK 465 U C 14 REMARK 465 U C 15 REMARK 465 G D 0 REMARK 465 G D 1 REMARK 465 U D 2 REMARK 465 U D 3 REMARK 465 G D 4 REMARK 465 C D 5 REMARK 465 A D 6 REMARK 465 A D 7 REMARK 465 C D 15A REMARK 465 C D 9 REMARK 465 U D 15C REMARK 465 C D 15D REMARK 465 G D 15E REMARK 465 U D 15F REMARK 465 U D 14 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 32 NH1 NH2 REMARK 470 TYR A 155 OH REMARK 470 ARG A 189 NH1 NH2 REMARK 470 A C 16 P OP1 OP2 O5' C5' C4' O4' REMARK 470 A C 16 C3' C2' O2' C1' N9 C8 N7 REMARK 470 A C 16 C5 C6 N6 N1 C2 N3 C4 REMARK 470 A D 15 P OP1 OP2 O5' C5' C4' O4' REMARK 470 A D 15 C3' C2' O2' C1' N9 C8 N7 REMARK 470 A D 15 C5 C6 N6 N1 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N3 G C 22 H62 A C 24 1.49 REMARK 500 OG1 THR B 146 OG1 THR B 156 2.11 REMARK 500 NH1 ARG A 131 O HOH A 2003 2.18 REMARK 500 OG SER B 229 OG SER B 231 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 17 77.07 -116.96 REMARK 500 LYS A 65 109.72 -55.82 REMARK 500 GLU A 127 34.57 -93.67 REMARK 500 PRO A 141 121.74 -38.22 REMARK 500 ASP A 170 -35.85 -37.90 REMARK 500 LEU B 104 77.19 -63.49 REMARK 500 LEU B 108 79.28 -116.61 REMARK 500 GLU B 127 35.94 -96.48 REMARK 500 PRO B 141 124.33 -38.95 REMARK 500 THR B 146 78.67 -113.83 REMARK 500 PRO B 157 54.82 -96.05 REMARK 500 PHE B 178 54.42 -118.77 REMARK 500 GLU B 193 0.07 -68.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C8Y RELATED DB: PDB REMARK 900 CAS6 (TTHA0078) SUBSTRATE MIMIC COMPLEX REMARK 900 RELATED ID: 4C8Z RELATED DB: PDB REMARK 900 CAS6 (TTHA0078) PRODUCT COMPLEX REMARK 900 RELATED ID: 4C97 RELATED DB: PDB REMARK 900 CAS6 (TTHA0078) H37A MUTANT REMARK 900 RELATED ID: 4C98 RELATED DB: PDB REMARK 900 THERMUS THERMOPHILUS CAS6 (TTHB231) REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL GAAS TAG DERIVED FROM EXPRESSION PLASMID DBREF 4C9D A 1 264 UNP Q53VU8 Q53VU8_THET8 1 264 DBREF 4C9D B 1 264 UNP Q53VU8 Q53VU8_THET8 1 264 DBREF 4C9D C 0 28 PDB 4C9D 4C9D 0 28 DBREF 4C9D D 0 28 PDB 4C9D 4C9D 0 28 SEQADV 4C9D GLY A -3 UNP Q53VU8 EXPRESSION TAG SEQADV 4C9D ALA A -2 UNP Q53VU8 EXPRESSION TAG SEQADV 4C9D ALA A -1 UNP Q53VU8 EXPRESSION TAG SEQADV 4C9D SER A 0 UNP Q53VU8 EXPRESSION TAG SEQADV 4C9D GLY B -3 UNP Q53VU8 EXPRESSION TAG SEQADV 4C9D ALA B -2 UNP Q53VU8 EXPRESSION TAG SEQADV 4C9D ALA B -1 UNP Q53VU8 EXPRESSION TAG SEQADV 4C9D SER B 0 UNP Q53VU8 EXPRESSION TAG SEQRES 1 A 268 GLY ALA ALA SER MET PRO GLN ALA VAL VAL LEU GLU LEU SEQRES 2 A 268 VAL GLY GLU LYS PRO PRO LEU TYR PRO ALA ARG TYR ALA SEQRES 3 A 268 HIS GLY LEU PHE PHE ALA LEU LEU SER ARG VAL SER PRO SEQRES 4 A 268 GLU LEU ALA GLN LYS LEU HIS GLU ALA PRO ARG LYS PRO SEQRES 5 A 268 PHE THR LEU ALA PRO LEU PRO ARG ALA GLY PRO GLU GLY SEQRES 6 A 268 ALA THR LEU LYS GLY THR LEU ARG LEU ARG LEU THR THR SEQRES 7 A 268 LEU ASP ASP GLY LEU PHE ALA PRO PHE LEU ARG ALA LEU SEQRES 8 A 268 LEU GLU ALA ALA PRO ASP GLY LEU PRO LEU GLY ASP SER SEQRES 9 A 268 SER TYR ARG LEU ALA ARG VAL LEU ALA THR ARG GLU GLY SEQRES 10 A 268 HIS PRO LEU ALA GLY ALA THR SER TRP GLU GLU LEU LYS SEQRES 11 A 268 GLU ALA PRO LYS ARG GLU LYS ALA THR PHE ARG PHE LEU SEQRES 12 A 268 THR PRO THR VAL PHE ALA THR SER LYS PRO GLY GLY ARG SEQRES 13 A 268 THR ARG TYR THR PRO LEU PRO ASP PRO ARG LEU ILE ALA SEQRES 14 A 268 GLY SER LEU LEU ASP LYS TRP GLN ALA HIS SER PRO PHE SEQRES 15 A 268 PRO TYR ASN PRO LYS GLU GLU ALA ALA LEU ARG GLU LEU SEQRES 16 A 268 PHE GLU LEU ASP LEU GLU VAL ALA GLY PHE ARG ASN LEU SEQRES 17 A 268 ARG PHE HIS ARG VAL GLN ALA GLY LYS GLY PHE PHE PRO SEQRES 18 A 268 GLY PHE THR GLY GLU ALA THR LEU ARG LEU TRP SER GLN SEQRES 19 A 268 SER LEU GLU ALA GLN GLU ALA LEU GLY ARG LEU HIS ALA SEQRES 20 A 268 LEU ALA PHE PHE SER GLY VAL GLY ALA LYS THR PRO TYR SEQRES 21 A 268 GLY MET GLY LEU ALA VAL PRO LEU SEQRES 1 B 268 GLY ALA ALA SER MET PRO GLN ALA VAL VAL LEU GLU LEU SEQRES 2 B 268 VAL GLY GLU LYS PRO PRO LEU TYR PRO ALA ARG TYR ALA SEQRES 3 B 268 HIS GLY LEU PHE PHE ALA LEU LEU SER ARG VAL SER PRO SEQRES 4 B 268 GLU LEU ALA GLN LYS LEU HIS GLU ALA PRO ARG LYS PRO SEQRES 5 B 268 PHE THR LEU ALA PRO LEU PRO ARG ALA GLY PRO GLU GLY SEQRES 6 B 268 ALA THR LEU LYS GLY THR LEU ARG LEU ARG LEU THR THR SEQRES 7 B 268 LEU ASP ASP GLY LEU PHE ALA PRO PHE LEU ARG ALA LEU SEQRES 8 B 268 LEU GLU ALA ALA PRO ASP GLY LEU PRO LEU GLY ASP SER SEQRES 9 B 268 SER TYR ARG LEU ALA ARG VAL LEU ALA THR ARG GLU GLY SEQRES 10 B 268 HIS PRO LEU ALA GLY ALA THR SER TRP GLU GLU LEU LYS SEQRES 11 B 268 GLU ALA PRO LYS ARG GLU LYS ALA THR PHE ARG PHE LEU SEQRES 12 B 268 THR PRO THR VAL PHE ALA THR SER LYS PRO GLY GLY ARG SEQRES 13 B 268 THR ARG TYR THR PRO LEU PRO ASP PRO ARG LEU ILE ALA SEQRES 14 B 268 GLY SER LEU LEU ASP LYS TRP GLN ALA HIS SER PRO PHE SEQRES 15 B 268 PRO TYR ASN PRO LYS GLU GLU ALA ALA LEU ARG GLU LEU SEQRES 16 B 268 PHE GLU LEU ASP LEU GLU VAL ALA GLY PHE ARG ASN LEU SEQRES 17 B 268 ARG PHE HIS ARG VAL GLN ALA GLY LYS GLY PHE PHE PRO SEQRES 18 B 268 GLY PHE THR GLY GLU ALA THR LEU ARG LEU TRP SER GLN SEQRES 19 B 268 SER LEU GLU ALA GLN GLU ALA LEU GLY ARG LEU HIS ALA SEQRES 20 B 268 LEU ALA PHE PHE SER GLY VAL GLY ALA LYS THR PRO TYR SEQRES 21 B 268 GLY MET GLY LEU ALA VAL PRO LEU SEQRES 1 C 29 G G U U G C A A A C C U C SEQRES 2 C 29 G U U A G C C U C G U A G SEQRES 3 C 29 A G 23G SEQRES 1 D 29 G G U U G C A A A C C U C SEQRES 2 D 29 G U U A G C C U C G U A G SEQRES 3 D 29 A G 23G MODRES 4C9D 23G C 28 G MODRES 4C9D 23G D 28 G HET 23G C 28 36 HET 23G D 28 36 HETNAM 23G GUANOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE FORMUL 3 23G 2(C10 H13 N5 O10 P2) FORMUL 5 HOH *15(H2 O) HELIX 1 1 TYR A 17 SER A 34 1 18 HELIX 2 2 SER A 34 ALA A 44 1 11 HELIX 3 3 LEU A 79 ALA A 91 1 13 HELIX 4 4 SER A 121 GLU A 127 1 7 HELIX 5 5 ASP A 160 SER A 176 1 17 HELIX 6 6 ASN A 181 ASP A 195 1 15 HELIX 7 7 SER A 231 GLY A 249 1 19 HELIX 8 8 LYS A 253 GLY A 257 5 5 HELIX 9 9 TYR B 17 SER B 34 1 18 HELIX 10 10 SER B 34 ALA B 44 1 11 HELIX 11 11 LEU B 79 ALA B 91 1 13 HELIX 12 12 PRO B 92 GLY B 94 5 3 HELIX 13 13 SER B 121 GLU B 127 1 7 HELIX 14 14 ASP B 160 SER B 176 1 17 HELIX 15 15 ASN B 181 ASP B 195 1 15 HELIX 16 16 SER B 231 GLY B 249 1 19 HELIX 17 17 LYS B 253 GLY B 257 5 5 SHEET 1 AA 5 PHE A 49 PRO A 53 0 SHEET 2 AA 5 LEU A 68 THR A 74 -1 O ARG A 71 N ALA A 52 SHEET 3 AA 5 GLN A 3 VAL A 10 -1 O GLN A 3 N THR A 74 SHEET 4 AA 5 SER A 101 LEU A 108 -1 O ARG A 103 N VAL A 10 SHEET 5 AA 5 LEU A 95 PRO A 96 -1 O LEU A 95 N TYR A 102 SHEET 1 AB 4 PHE A 49 PRO A 53 0 SHEET 2 AB 4 LEU A 68 THR A 74 -1 O ARG A 71 N ALA A 52 SHEET 3 AB 4 GLN A 3 VAL A 10 -1 O GLN A 3 N THR A 74 SHEET 4 AB 4 GLY A 118 ALA A 119 -1 O GLY A 118 N ALA A 4 SHEET 1 AC 4 LEU A 196 GLN A 210 0 SHEET 2 AC 4 PHE A 215 LEU A 227 -1 O PHE A 216 N VAL A 209 SHEET 3 AC 4 LYS A 133 THR A 142 -1 O ALA A 134 N LEU A 225 SHEET 4 AC 4 ALA A 261 PRO A 263 -1 O VAL A 262 N ARG A 137 SHEET 1 AD 2 PHE A 144 ALA A 145 0 SHEET 2 AD 2 TYR A 155 THR A 156 -1 N THR A 156 O PHE A 144 SHEET 1 BA 5 PHE B 49 PRO B 53 0 SHEET 2 BA 5 THR B 67 THR B 74 -1 O ARG B 71 N ALA B 52 SHEET 3 BA 5 GLN B 3 VAL B 10 -1 O GLN B 3 N THR B 74 SHEET 4 BA 5 SER B 100 LEU B 108 -1 N ARG B 103 O VAL B 10 SHEET 5 BA 5 LEU B 95 LEU B 97 -1 O LEU B 95 N TYR B 102 SHEET 1 BB 4 PHE B 49 PRO B 53 0 SHEET 2 BB 4 THR B 67 THR B 74 -1 O ARG B 71 N ALA B 52 SHEET 3 BB 4 GLN B 3 VAL B 10 -1 O GLN B 3 N THR B 74 SHEET 4 BB 4 GLY B 118 ALA B 119 -1 O GLY B 118 N ALA B 4 SHEET 1 BC 4 LEU B 196 GLN B 210 0 SHEET 2 BC 4 PHE B 215 LEU B 227 -1 O PHE B 216 N VAL B 209 SHEET 3 BC 4 LYS B 133 THR B 142 -1 O ALA B 134 N LEU B 225 SHEET 4 BC 4 ALA B 261 PRO B 263 -1 O VAL B 262 N ARG B 137 SHEET 1 BD 2 PHE B 144 ALA B 145 0 SHEET 2 BD 2 TYR B 155 THR B 156 -1 O THR B 156 N PHE B 144 LINK O3' G C 27 P 23G C 28 1555 1555 1.61 LINK O3' G D 27 P 23G D 28 1555 1555 1.60 CRYST1 75.220 75.220 308.780 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013294 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013294 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003239 0.00000