HEADER CELL CYCLE 04-OCT-13 4C9Y TITLE STRUCTURAL BASIS FOR THE MICROTUBULE BINDING OF THE HUMAN TITLE 2 KINETOCHORE SKA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: MT-BINDING DOMAIN, RESDUES 133-255; COMPND 5 SYNONYM: SKA1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEC-CDF-HIS KEYWDS CELL CYCLE, CELL DIVISON, KINETOCHORE-MICROTUBULE ATTACHMENT, KEYWDS 2 WINGED-HELIX DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR M.ABAD,B.MEDINA,A.SANTAMARIA,J.ZOU,C.PLASBERG-HILL,A.MADHUMALAR, AUTHOR 2 U.JAYACHANDRAN,P.M.REDLI,J.RAPPSILBER,E.A.NIGG,A.A.JEYAPRAKASH REVDAT 1 22-JAN-14 4C9Y 0 JRNL AUTH M.A.ABAD,B.MEDINA,A.SANTAMARIA,J.ZOU,C.PLASBERG-HILL, JRNL AUTH 2 A.MADHUMALAR,U.JAYACHANDRAN,P.M.REDLI,J.RAPPSILBER,E.A.NIGG, JRNL AUTH 3 A.A.JEYAPRAKASH JRNL TITL STRUCTURAL BASIS FOR MICROTUBULE RECOGNITION BY THE HUMAN JRNL TITL 2 KINETOCHORE SKA COMPLEX. JRNL REF NAT.COMMUN. V. 5 2964 2014 JRNL REFN ISSN 2041-1723 JRNL PMID 24413531 JRNL DOI 10.1038/NCOMMS3964 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.010 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.868 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.34 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.64 REMARK 3 NUMBER OF REFLECTIONS : 22475 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.1994 REMARK 3 R VALUE (WORKING SET) : 0.1940 REMARK 3 FREE R VALUE : 0.2462 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.44 REMARK 3 FREE R VALUE TEST SET COUNT : 2347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8789 - 5.1656 0.99 1285 157 0.2035 0.2511 REMARK 3 2 5.1656 - 4.1011 1.00 1219 147 0.1672 0.2100 REMARK 3 3 4.1011 - 3.5830 1.00 1209 129 0.1734 0.2165 REMARK 3 4 3.5830 - 3.2555 1.00 1185 144 0.1932 0.2322 REMARK 3 5 3.2555 - 3.0222 1.00 1214 118 0.1989 0.2345 REMARK 3 6 3.0222 - 2.8441 1.00 1176 150 0.2093 0.2923 REMARK 3 7 2.8441 - 2.7016 1.00 1197 136 0.2009 0.2506 REMARK 3 8 2.7016 - 2.5841 1.00 1158 142 0.2002 0.2719 REMARK 3 9 2.5841 - 2.4846 1.00 1187 138 0.1957 0.2840 REMARK 3 10 2.4846 - 2.3989 1.00 1186 130 0.1963 0.2742 REMARK 3 11 2.3989 - 2.3239 1.00 1164 133 0.2093 0.2367 REMARK 3 12 2.3239 - 2.2574 0.99 1149 146 0.1890 0.2519 REMARK 3 13 2.2574 - 2.1980 1.00 1183 123 0.2007 0.2794 REMARK 3 14 2.1980 - 2.1444 0.99 1169 132 0.2178 0.2748 REMARK 3 15 2.1444 - 2.0956 0.99 1168 128 0.2292 0.2971 REMARK 3 16 2.0956 - 2.0510 0.99 1118 159 0.2377 0.2876 REMARK 3 17 2.0510 - 2.0100 0.99 1161 135 0.2335 0.2938 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.21 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2062 REMARK 3 ANGLE : 1.094 2767 REMARK 3 CHIRALITY : 0.078 312 REMARK 3 PLANARITY : 0.005 345 REMARK 3 DIHEDRAL : 14.482 797 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN B AND (RESID 2 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6053 11.2337 21.4242 REMARK 3 T TENSOR REMARK 3 T11: 0.7212 T22: 0.4325 REMARK 3 T33: 0.4815 T12: 0.1309 REMARK 3 T13: 0.1060 T23: 0.0639 REMARK 3 L TENSOR REMARK 3 L11: 4.6890 L22: 3.9645 REMARK 3 L33: 7.2658 L12: 1.9465 REMARK 3 L13: -1.8890 L23: -5.3093 REMARK 3 S TENSOR REMARK 3 S11: -0.2665 S12: 0.1101 S13: 0.2048 REMARK 3 S21: -0.1182 S22: -0.2544 S23: -0.3433 REMARK 3 S31: -0.4758 S32: -0.2233 S33: 0.4093 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND (RESID 11 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5633 -5.0647 18.4452 REMARK 3 T TENSOR REMARK 3 T11: 0.8653 T22: 0.4537 REMARK 3 T33: 0.8022 T12: 0.0351 REMARK 3 T13: 0.1366 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 5.7406 L22: 5.7699 REMARK 3 L33: 5.5349 L12: -5.2137 REMARK 3 L13: -2.0154 L23: 3.5767 REMARK 3 S TENSOR REMARK 3 S11: 0.1756 S12: 0.4191 S13: -0.8666 REMARK 3 S21: -0.2842 S22: -0.8453 S23: 0.8061 REMARK 3 S31: 0.7277 S32: -0.2029 S33: 0.5876 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESID 27 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8032 12.2320 13.8290 REMARK 3 T TENSOR REMARK 3 T11: 0.4827 T22: 0.2624 REMARK 3 T33: 0.4733 T12: 0.1184 REMARK 3 T13: 0.2717 T23: 0.0793 REMARK 3 L TENSOR REMARK 3 L11: 0.9548 L22: 1.6490 REMARK 3 L33: 2.0389 L12: 0.3544 REMARK 3 L13: 0.6114 L23: -0.7789 REMARK 3 S TENSOR REMARK 3 S11: -0.6439 S12: -0.1479 S13: -0.5367 REMARK 3 S21: -0.5299 S22: 0.3449 S23: -0.7074 REMARK 3 S31: 0.8267 S32: 0.4803 S33: 0.2122 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 49 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7983 33.6648 10.9149 REMARK 3 T TENSOR REMARK 3 T11: 0.6553 T22: 0.4001 REMARK 3 T33: 0.3837 T12: 0.0032 REMARK 3 T13: 0.0584 T23: -0.0503 REMARK 3 L TENSOR REMARK 3 L11: 1.4420 L22: 7.7345 REMARK 3 L33: 0.4426 L12: 1.9098 REMARK 3 L13: 0.6549 L23: 0.9761 REMARK 3 S TENSOR REMARK 3 S11: 0.1627 S12: -0.3865 S13: 0.6118 REMARK 3 S21: 1.2817 S22: 0.1179 S23: 0.7479 REMARK 3 S31: -0.4866 S32: -0.4351 S33: -0.2246 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 57 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8122 29.4415 6.1051 REMARK 3 T TENSOR REMARK 3 T11: 0.4350 T22: 0.2707 REMARK 3 T33: 0.2778 T12: 0.0177 REMARK 3 T13: 0.0519 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 5.6977 L22: 6.8230 REMARK 3 L33: 5.6789 L12: 4.2197 REMARK 3 L13: -5.5494 L23: -4.6666 REMARK 3 S TENSOR REMARK 3 S11: 0.2857 S12: 0.7933 S13: 0.9434 REMARK 3 S21: -0.0847 S22: 0.4065 S23: 0.5078 REMARK 3 S31: -0.4558 S32: -0.5395 S33: -0.6682 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 70 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5537 20.8606 12.5864 REMARK 3 T TENSOR REMARK 3 T11: 0.5164 T22: 0.3555 REMARK 3 T33: 0.4352 T12: 0.0466 REMARK 3 T13: 0.1435 T23: 0.0932 REMARK 3 L TENSOR REMARK 3 L11: 4.7879 L22: 8.4516 REMARK 3 L33: 4.6036 L12: -1.9160 REMARK 3 L13: 1.9640 L23: 0.4731 REMARK 3 S TENSOR REMARK 3 S11: -0.0495 S12: 0.1782 S13: 0.4329 REMARK 3 S21: 0.0051 S22: 0.2901 S23: 0.5976 REMARK 3 S31: -0.3261 S32: -0.9962 S33: -0.3391 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 89 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7351 5.0411 9.6394 REMARK 3 T TENSOR REMARK 3 T11: 0.8185 T22: 0.6462 REMARK 3 T33: 0.5569 T12: 0.0269 REMARK 3 T13: 0.1553 T23: -0.0728 REMARK 3 L TENSOR REMARK 3 L11: 7.7184 L22: 7.2591 REMARK 3 L33: 5.2034 L12: 5.2239 REMARK 3 L13: -5.6628 L23: -4.8607 REMARK 3 S TENSOR REMARK 3 S11: -0.2853 S12: 1.8610 S13: 0.1860 REMARK 3 S21: -1.2897 S22: 0.4500 S23: 0.6072 REMARK 3 S31: -0.0647 S32: -2.3115 S33: 0.0416 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 107 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7087 11.1020 18.2824 REMARK 3 T TENSOR REMARK 3 T11: 0.2321 T22: 0.5675 REMARK 3 T33: 0.6657 T12: 0.0012 REMARK 3 T13: 0.2199 T23: 0.1717 REMARK 3 L TENSOR REMARK 3 L11: 2.1377 L22: 6.9757 REMARK 3 L33: 9.6766 L12: 0.4975 REMARK 3 L13: 0.2277 L23: -4.2703 REMARK 3 S TENSOR REMARK 3 S11: 0.1329 S12: 1.0906 S13: -0.0223 REMARK 3 S21: -0.2899 S22: 0.6244 S23: 1.3388 REMARK 3 S31: 0.6764 S32: -1.0789 S33: -0.3112 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESID 115 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0868 17.2549 12.8950 REMARK 3 T TENSOR REMARK 3 T11: 0.3945 T22: 0.4938 REMARK 3 T33: 0.4795 T12: 0.0117 REMARK 3 T13: 0.1152 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 8.7950 L22: 4.8897 REMARK 3 L33: 5.0703 L12: 0.2087 REMARK 3 L13: 0.6220 L23: -4.7590 REMARK 3 S TENSOR REMARK 3 S11: -0.0362 S12: 0.7714 S13: -0.6359 REMARK 3 S21: -0.3816 S22: 0.7653 S23: 1.2356 REMARK 3 S31: 0.7178 S32: -1.4934 S33: -0.4907 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND (RESID 2 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9138 23.4458 -18.7315 REMARK 3 T TENSOR REMARK 3 T11: 0.5120 T22: 0.4417 REMARK 3 T33: 0.3874 T12: -0.0713 REMARK 3 T13: -0.0039 T23: 0.0512 REMARK 3 L TENSOR REMARK 3 L11: 4.8549 L22: 4.3167 REMARK 3 L33: 8.5621 L12: 2.4025 REMARK 3 L13: -0.2136 L23: 5.0589 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: 0.0391 S13: 0.4832 REMARK 3 S21: 0.1505 S22: 0.0242 S23: 0.1431 REMARK 3 S31: -0.4558 S32: 0.3176 S33: 0.0073 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN A AND (RESID 11 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3858 8.0957 -17.6142 REMARK 3 T TENSOR REMARK 3 T11: 0.7218 T22: 0.4162 REMARK 3 T33: 1.2068 T12: -0.0052 REMARK 3 T13: -0.0378 T23: 0.0667 REMARK 3 L TENSOR REMARK 3 L11: 9.9483 L22: 4.9360 REMARK 3 L33: 4.1399 L12: -2.9932 REMARK 3 L13: -3.4416 L23: -0.4056 REMARK 3 S TENSOR REMARK 3 S11: 0.3010 S12: -0.4195 S13: -1.8372 REMARK 3 S21: -0.0174 S22: -0.1943 S23: -1.7596 REMARK 3 S31: 1.3941 S32: 0.6445 S33: 0.0558 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN A AND (RESID 27 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8595 24.6538 -10.9865 REMARK 3 T TENSOR REMARK 3 T11: 0.2574 T22: 0.2424 REMARK 3 T33: 0.2864 T12: -0.0832 REMARK 3 T13: 0.0726 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 2.6373 L22: 1.8148 REMARK 3 L33: 4.6113 L12: -1.5774 REMARK 3 L13: -0.1879 L23: 2.2825 REMARK 3 S TENSOR REMARK 3 S11: 0.0603 S12: -0.0732 S13: -0.2642 REMARK 3 S21: 0.7306 S22: -0.0787 S23: 0.8118 REMARK 3 S31: 0.4951 S32: -0.2840 S33: -0.0015 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN A AND (RESID 49 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2575 45.7115 -7.3413 REMARK 3 T TENSOR REMARK 3 T11: 0.7150 T22: 0.4308 REMARK 3 T33: 0.8137 T12: 0.1101 REMARK 3 T13: 0.2119 T23: 0.0614 REMARK 3 L TENSOR REMARK 3 L11: 9.1399 L22: 8.2260 REMARK 3 L33: 8.5533 L12: 1.0909 REMARK 3 L13: 3.3651 L23: -7.2949 REMARK 3 S TENSOR REMARK 3 S11: 0.5621 S12: -0.2040 S13: 0.5568 REMARK 3 S21: 0.8241 S22: 0.2782 S23: 2.7010 REMARK 3 S31: -0.9218 S32: -0.1674 S33: -0.7427 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN A AND (RESID 57 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2563 42.0051 -5.3749 REMARK 3 T TENSOR REMARK 3 T11: 0.5118 T22: 0.2800 REMARK 3 T33: 0.3933 T12: -0.0806 REMARK 3 T13: 0.1307 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 3.2771 L22: 3.3881 REMARK 3 L33: 3.0292 L12: 0.7800 REMARK 3 L13: -0.8796 L23: 0.5059 REMARK 3 S TENSOR REMARK 3 S11: 0.5141 S12: -0.0529 S13: 0.6976 REMARK 3 S21: 0.5682 S22: 0.1039 S23: -0.2240 REMARK 3 S31: -0.8113 S32: 0.0945 S33: -0.7346 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN A AND (RESID 70 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5635 36.0339 -18.0460 REMARK 3 T TENSOR REMARK 3 T11: 0.6261 T22: 0.4238 REMARK 3 T33: 0.3042 T12: -0.1843 REMARK 3 T13: 0.1647 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 5.3684 L22: 8.5755 REMARK 3 L33: 5.8434 L12: 2.7956 REMARK 3 L13: -0.1178 L23: -4.7436 REMARK 3 S TENSOR REMARK 3 S11: 0.0365 S12: 0.7633 S13: 0.4660 REMARK 3 S21: -1.3355 S22: 0.5227 S23: -0.3746 REMARK 3 S31: -1.0402 S32: 1.2753 S33: -0.1100 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN A AND (RESID 82 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4600 25.9699 -3.1083 REMARK 3 T TENSOR REMARK 3 T11: 0.4226 T22: 0.3777 REMARK 3 T33: 0.3265 T12: 0.0269 REMARK 3 T13: -0.0324 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 7.7855 L22: 2.5668 REMARK 3 L33: 3.1665 L12: 0.1992 REMARK 3 L13: -3.5663 L23: 1.7805 REMARK 3 S TENSOR REMARK 3 S11: -0.0346 S12: -0.2866 S13: 0.0474 REMARK 3 S21: 0.9915 S22: 0.3748 S23: -0.4706 REMARK 3 S31: 0.1219 S32: 0.9392 S33: -0.3409 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN A AND (RESID 95 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3951 16.9557 -12.6545 REMARK 3 T TENSOR REMARK 3 T11: 0.5106 T22: 0.4797 REMARK 3 T33: 0.4943 T12: 0.0134 REMARK 3 T13: 0.0067 T23: 0.0401 REMARK 3 L TENSOR REMARK 3 L11: 3.4968 L22: 5.7636 REMARK 3 L33: 2.4717 L12: -0.6105 REMARK 3 L13: 2.8484 L23: -0.5612 REMARK 3 S TENSOR REMARK 3 S11: 0.0449 S12: -0.6974 S13: -0.1685 REMARK 3 S21: 0.3642 S22: -0.6410 S23: -1.3014 REMARK 3 S31: 0.4447 S32: 1.4732 S33: 0.1356 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN A AND (RESID 107 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8990 22.9513 -20.2913 REMARK 3 T TENSOR REMARK 3 T11: 0.3354 T22: 0.3518 REMARK 3 T33: 0.5017 T12: -0.0031 REMARK 3 T13: 0.1091 T23: -0.0923 REMARK 3 L TENSOR REMARK 3 L11: 3.3754 L22: 2.6641 REMARK 3 L33: 5.3934 L12: 1.4539 REMARK 3 L13: 4.1516 L23: 2.0194 REMARK 3 S TENSOR REMARK 3 S11: 0.7306 S12: 0.4170 S13: 0.2612 REMARK 3 S21: -0.2034 S22: 0.1631 S23: -0.9120 REMARK 3 S31: 0.8566 S32: 0.9753 S33: -0.6426 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN A AND (RESID 114 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9376 30.0281 -14.7400 REMARK 3 T TENSOR REMARK 3 T11: 0.2431 T22: 0.4863 REMARK 3 T33: 0.4393 T12: -0.1329 REMARK 3 T13: 0.1098 T23: -0.1467 REMARK 3 L TENSOR REMARK 3 L11: 7.8291 L22: 6.9212 REMARK 3 L33: 6.2140 L12: 2.2742 REMARK 3 L13: -0.9003 L23: -2.3416 REMARK 3 S TENSOR REMARK 3 S11: -0.2166 S12: 0.4936 S13: -0.5144 REMARK 3 S21: -0.0777 S22: 0.6487 S23: -0.9491 REMARK 3 S31: -0.5823 S32: 1.8569 S33: -0.1462 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4C9Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-OCT-13. REMARK 100 THE PDBE ID CODE IS EBI-58632. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS 6M) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.00 REMARK 200 RESOLUTION RANGE LOW (A) : 63.90 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.5 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.20 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.5 REMARK 200 R MERGE FOR SHELL (I) : 0.46 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE-MES BUFFER, 0.09 REMARK 280 M NPS MIX AND 30% EDO_P8K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.24100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.24100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 19.50300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.78900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 19.50300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.78900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.24100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 19.50300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 80.78900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 52.24100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 19.50300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 80.78900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2066 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2004 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 24 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 53 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2007 O HOH A 2008 2.16 REMARK 500 O HOH B 2055 O HOH B 2056 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 23 -121.04 48.02 REMARK 500 ASP A 94 -164.03 -112.52 REMARK 500 SER B 23 -113.45 54.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CA0 RELATED DB: PDB REMARK 900 STRUCTURAL BASIS FOR THE MICROTUBULE BINDING OF THE REMARK 900 HUMAN KINETOCHORE SKA COMPLEX REMARK 999 REMARK 999 SEQUENCE REMARK 999 SELENOMETHIONINE LABELED DBREF 4C9Y A 2 124 UNP Q96BD8 SKA1_HUMAN 133 255 DBREF 4C9Y B 2 124 UNP Q96BD8 SKA1_HUMAN 133 255 SEQRES 1 A 123 SER ILE LYS GLU MSE PRO PHE ILE THR CYS ASP GLU PHE SEQRES 2 A 123 ASN GLY VAL PRO SER TYR MSE LYS SER ARG LEU THR TYR SEQRES 3 A 123 ASN GLN ILE ASN ASP VAL ILE LYS GLU ILE ASN LYS ALA SEQRES 4 A 123 VAL ILE SER LYS TYR LYS ILE LEU HIS GLN PRO LYS LYS SEQRES 5 A 123 SER MSE ASN SER VAL THR ARG ASN LEU TYR HIS ARG PHE SEQRES 6 A 123 ILE ASP GLU GLU THR LYS ASP THR LYS GLY ARG TYR PHE SEQRES 7 A 123 ILE VAL GLU ALA ASP ILE LYS GLU PHE THR THR LEU LYS SEQRES 8 A 123 ALA ASP LYS LYS PHE HIS VAL LEU LEU ASN ILE LEU ARG SEQRES 9 A 123 HIS CYS ARG ARG LEU SER GLU VAL ARG GLY GLY GLY LEU SEQRES 10 A 123 THR ARG TYR VAL ILE THR SEQRES 1 B 123 SER ILE LYS GLU MSE PRO PHE ILE THR CYS ASP GLU PHE SEQRES 2 B 123 ASN GLY VAL PRO SER TYR MSE LYS SER ARG LEU THR TYR SEQRES 3 B 123 ASN GLN ILE ASN ASP VAL ILE LYS GLU ILE ASN LYS ALA SEQRES 4 B 123 VAL ILE SER LYS TYR LYS ILE LEU HIS GLN PRO LYS LYS SEQRES 5 B 123 SER MSE ASN SER VAL THR ARG ASN LEU TYR HIS ARG PHE SEQRES 6 B 123 ILE ASP GLU GLU THR LYS ASP THR LYS GLY ARG TYR PHE SEQRES 7 B 123 ILE VAL GLU ALA ASP ILE LYS GLU PHE THR THR LEU LYS SEQRES 8 B 123 ALA ASP LYS LYS PHE HIS VAL LEU LEU ASN ILE LEU ARG SEQRES 9 B 123 HIS CYS ARG ARG LEU SER GLU VAL ARG GLY GLY GLY LEU SEQRES 10 B 123 THR ARG TYR VAL ILE THR MODRES 4C9Y MSE A 6 MET SELENOMETHIONINE MODRES 4C9Y MSE A 21 MET SELENOMETHIONINE MODRES 4C9Y MSE A 55 MET SELENOMETHIONINE MODRES 4C9Y MSE B 6 MET SELENOMETHIONINE MODRES 4C9Y MSE B 21 MET SELENOMETHIONINE MODRES 4C9Y MSE B 55 MET SELENOMETHIONINE HET MSE A 6 8 HET MSE A 21 8 HET MSE A 55 8 HET MSE B 6 8 HET MSE B 21 8 HET MSE B 55 8 HETNAM MSE SELENOMETHIONINE FORMUL 3 MSE 6(C5 H11 N O2 SE) FORMUL 4 HOH *135(H2 O) HELIX 1 1 THR A 10 GLY A 16 1 7 HELIX 2 2 PRO A 18 SER A 23 1 6 HELIX 3 3 THR A 26 HIS A 49 1 24 HELIX 4 4 PRO A 51 MSE A 55 5 5 HELIX 5 5 ASN A 56 GLU A 70 1 15 HELIX 6 6 VAL A 81 THR A 89 1 9 HELIX 7 7 ASP A 94 CYS A 107 1 14 HELIX 8 8 THR B 10 VAL B 17 1 8 HELIX 9 9 PRO B 18 SER B 23 1 6 HELIX 10 10 THR B 26 HIS B 49 1 24 HELIX 11 11 PRO B 51 MSE B 55 5 5 HELIX 12 12 ASN B 56 GLU B 70 1 15 HELIX 13 13 THR B 71 LYS B 75 5 5 HELIX 14 14 VAL B 81 THR B 89 1 9 HELIX 15 15 ASP B 94 CYS B 107 1 14 SHEET 1 AA 3 PHE A 79 ILE A 80 0 SHEET 2 AA 3 ARG A 120 ILE A 123 -1 O TYR A 121 N ILE A 80 SHEET 3 AA 3 LEU A 110 VAL A 113 -1 O SER A 111 N VAL A 122 SHEET 1 BA 3 PHE B 79 ILE B 80 0 SHEET 2 BA 3 LEU B 118 ILE B 123 -1 O TYR B 121 N ILE B 80 SHEET 3 BA 3 LEU B 110 GLY B 115 -1 O SER B 111 N VAL B 122 LINK C GLU A 5 N MSE A 6 1555 1555 1.32 LINK C MSE A 6 N PRO A 7 1555 1555 1.34 LINK C TYR A 20 N MSE A 21 1555 1555 1.33 LINK C MSE A 21 N LYS A 22 1555 1555 1.33 LINK C SER A 54 N MSE A 55 1555 1555 1.33 LINK C MSE A 55 N ASN A 56 1555 1555 1.33 LINK C GLU B 5 N MSE B 6 1555 1555 1.32 LINK C MSE B 6 N PRO B 7 1555 1555 1.34 LINK C TYR B 20 N MSE B 21 1555 1555 1.33 LINK C MSE B 21 N LYS B 22 1555 1555 1.33 LINK C SER B 54 N MSE B 55 1555 1555 1.33 LINK C MSE B 55 N ASN B 56 1555 1555 1.33 CRYST1 39.006 161.578 104.482 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025637 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006189 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009571 0.00000