HEADER VIRUS 28-OCT-13 4CCT TITLE DENGUE 1 CRYO-EM RECONSTRUCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DENGUE VIRUS 1 E PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: DENGUE VIRUS 1 M PROTEIN; COMPND 6 CHAIN: D, E, F SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DENGUE VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11053; SOURCE 4 STRAIN: PVP159 (DEN1/SG/07K3640DK1/2008); SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: DENGUE VIRUS 1; SOURCE 7 ORGANISM_TAXID: 11053; SOURCE 8 STRAIN: PVP159 (DEN1/SG/07K3640DK1/2008) KEYWDS VIRUS, FLAVIVIRUS EXPDTA ELECTRON MICROSCOPY MDLTYP CA ATOMS ONLY, CHAIN A, B, C, D, E, F AUTHOR V.A.KOSTYUCHENKO,Q.ZHANG,J.L.TAN,T.S.NG,S.M.LOK REVDAT 3 30-AUG-17 4CCT 1 REMARK REVDAT 2 19-APR-17 4CCT 1 REMARK REVDAT 1 06-NOV-13 4CCT 0 SPRSDE 06-NOV-13 4CCT 4AZX JRNL AUTH V.A.KOSTYUCHENKO,Q.ZHANG,J.L.TAN,T.S.NG,S.M.LOK JRNL TITL IMMATURE AND MATURE DENGUE SEROTYPE 1 VIRUS STRUCTURES JRNL TITL 2 PROVIDE INSIGHT INTO THE MATURATION PROCESS. JRNL REF J.VIROL. V. 87 7700 2013 JRNL REFN ISSN 0022-538X JRNL PMID 23637416 JRNL DOI 10.1128/JVI.00197-13 REMARK 2 REMARK 2 RESOLUTION. 4.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : UCSF CHIMERA, EMAN, EMAN REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1TG8 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : OTHER REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : METHOD--LOCAL CORRELATION REFINEMENT PROTOCOL- REMARK 3 -X-RAY REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.200 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.500 REMARK 3 NUMBER OF PARTICLES : 6412 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: FTER MODELING THE STRUCTURES WERE REGULARIZED USING REMARK 3 MOLECULAR DYNAMICS WITH FLEXIBLE MOLECULAR DYNAMICS WITH REMARK 3 FLEXIBLE FITTING PROTOCOL. SUBMISSION BASED ON EXPERIMENTAL DATA REMARK 3 FROM EMDB EMD-2142.(DEPOSITION ID: 10897). REMARK 4 REMARK 4 4CCT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. REMARK 100 THE DEPOSITION ID IS D_1290058828. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : MATURE DENGUE VIRUS 1 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : CARBON REMARK 245 SAMPLE VITRIFICATION DETAILS : LIQUID ETHANE REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 16-DEC-11 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 100.00 REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN ULTRASCAN 4000 (4K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 989.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3441.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 18.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 75000 REMARK 245 CALIBRATED MAGNIFICATION : 75000 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.951057 0.000000 -0.00002 REMARK 350 BIOMT2 2 0.951057 0.309017 0.000000 0.00001 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.587785 0.000000 -0.00004 REMARK 350 BIOMT2 3 0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.587785 0.000000 -0.00003 REMARK 350 BIOMT2 4 -0.587785 -0.809017 0.000000 -0.00002 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.951057 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.951057 0.309017 0.000000 -0.00002 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 -0.947214 -0.162460 0.276393 -0.00004 REMARK 350 BIOMT2 6 -0.162460 -0.500000 -0.850651 -0.00001 REMARK 350 BIOMT3 6 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 7 -0.447214 0.850651 0.276393 -0.00002 REMARK 350 BIOMT2 7 -0.525731 0.000000 -0.850651 -0.00002 REMARK 350 BIOMT3 7 -0.723607 -0.525731 0.447214 -0.00002 REMARK 350 BIOMT1 8 0.670820 0.688191 0.276393 0.00000 REMARK 350 BIOMT2 8 -0.162460 0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 8 -0.723607 0.525731 0.447214 -0.00001 REMARK 350 BIOMT1 9 0.861803 -0.425325 0.276393 0.00000 REMARK 350 BIOMT2 9 0.425325 0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 9 0.276393 0.850651 0.447214 0.00001 REMARK 350 BIOMT1 10 -0.138197 -0.951057 0.276393 -0.00003 REMARK 350 BIOMT2 10 0.425325 -0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 10 0.894427 0.000000 0.447214 0.00002 REMARK 350 BIOMT1 11 -0.861803 -0.425326 -0.276393 -0.00004 REMARK 350 BIOMT2 11 -0.425326 0.309017 0.850651 -0.00001 REMARK 350 BIOMT3 11 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 12 -0.670820 0.688191 -0.276393 -0.00003 REMARK 350 BIOMT2 12 0.162460 0.500000 0.850651 0.00000 REMARK 350 BIOMT3 12 0.723607 0.525731 -0.447214 0.00002 REMARK 350 BIOMT1 13 0.447214 0.850651 -0.276393 0.00000 REMARK 350 BIOMT2 13 0.525731 0.000000 0.850651 0.00000 REMARK 350 BIOMT3 13 0.723607 -0.525731 -0.447214 0.00001 REMARK 350 BIOMT1 14 0.947214 -0.162460 -0.276393 0.00000 REMARK 350 BIOMT2 14 0.162460 -0.500000 0.850651 0.00000 REMARK 350 BIOMT3 14 -0.276393 -0.850651 -0.447214 -0.00001 REMARK 350 BIOMT1 15 0.138197 -0.951056 -0.276393 -0.00002 REMARK 350 BIOMT2 15 -0.425325 -0.309017 0.850651 -0.00002 REMARK 350 BIOMT3 15 -0.894427 0.000000 -0.447214 -0.00002 REMARK 350 BIOMT1 16 0.809017 0.587785 0.000000 0.00000 REMARK 350 BIOMT2 16 0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 0.809017 -0.587785 0.000000 0.00000 REMARK 350 BIOMT2 17 -0.587785 -0.809017 0.000000 -0.00002 REMARK 350 BIOMT3 17 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 18 -0.309017 -0.951057 0.000000 -0.00003 REMARK 350 BIOMT2 18 -0.951057 0.309017 0.000000 -0.00002 REMARK 350 BIOMT3 18 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 -0.00004 REMARK 350 BIOMT2 19 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 20 -0.309017 0.951056 0.000000 -0.00002 REMARK 350 BIOMT2 20 0.951056 0.309017 0.000000 0.00001 REMARK 350 BIOMT3 20 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 21 -0.138197 -0.425325 0.894427 -0.00002 REMARK 350 BIOMT2 21 0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 21 0.276393 0.850651 0.447214 0.00001 REMARK 350 BIOMT1 22 -0.447214 0.000000 0.894427 -0.00003 REMARK 350 BIOMT2 22 0.000000 -1.000000 0.000000 -0.00001 REMARK 350 BIOMT3 22 0.894427 0.000000 0.447214 0.00002 REMARK 350 BIOMT1 23 -0.138197 0.425325 0.894427 -0.00002 REMARK 350 BIOMT2 23 -0.951057 -0.309017 0.000000 -0.00003 REMARK 350 BIOMT3 23 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 24 0.361803 0.262866 0.894427 -0.00001 REMARK 350 BIOMT2 24 -0.587785 0.809017 0.000000 -0.00001 REMARK 350 BIOMT3 24 -0.723607 -0.525731 0.447214 -0.00002 REMARK 350 BIOMT1 25 0.361803 -0.262866 0.894427 -0.00001 REMARK 350 BIOMT2 25 0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 25 -0.723607 0.525731 0.447214 -0.00001 REMARK 350 BIOMT1 26 0.447214 -0.525731 0.723607 -0.00001 REMARK 350 BIOMT2 26 -0.850651 0.000000 0.525731 -0.00002 REMARK 350 BIOMT3 26 -0.276393 -0.850651 -0.447214 -0.00001 REMARK 350 BIOMT1 27 -0.361803 -0.587785 0.723607 -0.00003 REMARK 350 BIOMT2 27 -0.262866 0.809017 0.525731 0.00000 REMARK 350 BIOMT3 27 -0.894427 0.000000 -0.447214 -0.00002 REMARK 350 BIOMT1 28 -0.670820 0.162460 0.723607 -0.00003 REMARK 350 BIOMT2 28 0.688191 0.500000 0.525731 0.00000 REMARK 350 BIOMT3 28 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 29 -0.052787 0.688191 0.723607 -0.00002 REMARK 350 BIOMT2 29 0.688191 -0.500000 0.525731 0.00000 REMARK 350 BIOMT3 29 0.723607 0.525731 -0.447214 0.00002 REMARK 350 BIOMT1 30 0.638197 0.262866 0.723607 0.00000 REMARK 350 BIOMT2 30 -0.262866 -0.809017 0.525731 -0.00002 REMARK 350 BIOMT3 30 0.723607 -0.525731 -0.447214 0.00001 REMARK 350 BIOMT1 31 0.052786 0.688191 -0.723607 -0.00001 REMARK 350 BIOMT2 31 -0.688191 -0.500000 -0.525731 -0.00002 REMARK 350 BIOMT3 31 -0.723607 0.525731 0.447214 -0.00001 REMARK 350 BIOMT1 32 0.670820 0.162460 -0.723607 0.00000 REMARK 350 BIOMT2 32 -0.688191 0.500000 -0.525731 -0.00002 REMARK 350 BIOMT3 32 0.276393 0.850651 0.447214 0.00001 REMARK 350 BIOMT1 33 0.361803 -0.587785 -0.723607 -0.00002 REMARK 350 BIOMT2 33 0.262866 0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 33 0.894427 0.000000 0.447214 0.00002 REMARK 350 BIOMT1 34 -0.447214 -0.525731 -0.723607 -0.00003 REMARK 350 BIOMT2 34 0.850651 0.000000 -0.525731 0.00000 REMARK 350 BIOMT3 34 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 35 -0.638197 0.262866 -0.723607 -0.00003 REMARK 350 BIOMT2 35 0.262866 -0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 35 -0.723607 -0.525731 0.447214 -0.00002 REMARK 350 BIOMT1 36 -0.361803 0.262866 -0.894427 -0.00002 REMARK 350 BIOMT2 36 0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 36 0.723607 -0.525731 -0.447214 0.00001 REMARK 350 BIOMT1 37 0.138197 0.425325 -0.894427 -0.00001 REMARK 350 BIOMT2 37 0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 37 -0.276393 -0.850651 -0.447214 -0.00001 REMARK 350 BIOMT1 38 0.447214 0.000000 -0.894427 -0.00001 REMARK 350 BIOMT2 38 0.000000 -1.000000 0.000000 -0.00001 REMARK 350 BIOMT3 38 -0.894427 0.000000 -0.447214 -0.00002 REMARK 350 BIOMT1 39 0.138197 -0.425325 -0.894427 -0.00002 REMARK 350 BIOMT2 39 -0.951056 -0.309017 0.000000 -0.00003 REMARK 350 BIOMT3 39 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 40 -0.361803 -0.262866 -0.894427 -0.00003 REMARK 350 BIOMT2 40 -0.587785 0.809017 0.000000 -0.00001 REMARK 350 BIOMT3 40 0.723607 0.525731 -0.447214 0.00002 REMARK 350 BIOMT1 41 -0.138197 0.951057 0.276393 -0.00002 REMARK 350 BIOMT2 41 -0.425325 -0.309017 0.850651 -0.00002 REMARK 350 BIOMT3 41 0.894427 0.000000 0.447214 0.00002 REMARK 350 BIOMT1 42 0.861803 0.425325 0.276393 0.00000 REMARK 350 BIOMT2 42 -0.425325 0.309017 0.850651 -0.00001 REMARK 350 BIOMT3 42 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 43 0.670820 -0.688191 0.276393 -0.00001 REMARK 350 BIOMT2 43 0.162460 0.500000 0.850651 0.00000 REMARK 350 BIOMT3 43 -0.723607 -0.525731 0.447214 -0.00002 REMARK 350 BIOMT1 44 -0.447214 -0.850651 0.276393 -0.00003 REMARK 350 BIOMT2 44 0.525731 0.000000 0.850651 0.00000 REMARK 350 BIOMT3 44 -0.723607 0.525731 0.447214 -0.00001 REMARK 350 BIOMT1 45 -0.947214 0.162460 0.276393 -0.00004 REMARK 350 BIOMT2 45 0.162460 -0.500000 0.850651 0.00000 REMARK 350 BIOMT3 45 0.276393 0.850651 0.447214 0.00001 REMARK 350 BIOMT1 46 0.052786 -0.688191 -0.723607 -0.00002 REMARK 350 BIOMT2 46 0.688191 -0.500000 0.525731 0.00000 REMARK 350 BIOMT3 46 -0.723607 -0.525731 0.447214 -0.00002 REMARK 350 BIOMT1 47 -0.638197 -0.262866 -0.723607 -0.00003 REMARK 350 BIOMT2 47 -0.262866 -0.809017 0.525731 -0.00002 REMARK 350 BIOMT3 47 -0.723607 0.525731 0.447214 -0.00001 REMARK 350 BIOMT1 48 -0.447214 0.525731 -0.723607 -0.00002 REMARK 350 BIOMT2 48 -0.850651 0.000000 0.525731 -0.00002 REMARK 350 BIOMT3 48 0.276393 0.850651 0.447214 0.00001 REMARK 350 BIOMT1 49 0.361803 0.587785 -0.723607 0.00000 REMARK 350 BIOMT2 49 -0.262866 0.809017 0.525731 0.00000 REMARK 350 BIOMT3 49 0.894427 0.000000 0.447214 0.00002 REMARK 350 BIOMT1 50 0.670820 -0.162460 -0.723607 0.00000 REMARK 350 BIOMT2 50 0.688191 0.500000 0.525731 0.00000 REMARK 350 BIOMT3 50 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 51 -0.361803 0.587785 0.723607 -0.00002 REMARK 350 BIOMT2 51 0.262866 0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 51 -0.894427 0.000000 -0.447214 -0.00002 REMARK 350 BIOMT1 52 0.447214 0.525731 0.723607 0.00000 REMARK 350 BIOMT2 52 0.850651 0.000000 -0.525731 0.00000 REMARK 350 BIOMT3 52 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 53 0.638197 -0.262866 0.723607 0.00000 REMARK 350 BIOMT2 53 0.262866 -0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 53 0.723607 0.525731 -0.447214 0.00002 REMARK 350 BIOMT1 54 -0.052786 -0.688191 0.723607 -0.00002 REMARK 350 BIOMT2 54 -0.688191 -0.500000 -0.525731 -0.00002 REMARK 350 BIOMT3 54 0.723607 -0.525731 -0.447214 0.00001 REMARK 350 BIOMT1 55 -0.670820 -0.162460 0.723607 -0.00003 REMARK 350 BIOMT2 55 -0.688191 0.500000 -0.525731 -0.00002 REMARK 350 BIOMT3 55 -0.276393 -0.850651 -0.447214 -0.00001 REMARK 350 BIOMT1 56 0.447214 -0.850651 -0.276393 -0.00002 REMARK 350 BIOMT2 56 -0.525731 0.000000 -0.850651 -0.00002 REMARK 350 BIOMT3 56 0.723607 0.525731 -0.447214 0.00002 REMARK 350 BIOMT1 57 -0.670820 -0.688191 -0.276393 -0.00004 REMARK 350 BIOMT2 57 -0.162460 0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 57 0.723607 -0.525731 -0.447214 0.00001 REMARK 350 BIOMT1 58 -0.861803 0.425325 -0.276393 -0.00003 REMARK 350 BIOMT2 58 0.425325 0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 58 -0.276393 -0.850651 -0.447214 -0.00001 REMARK 350 BIOMT1 59 0.138197 0.951057 -0.276393 -0.00001 REMARK 350 BIOMT2 59 0.425325 -0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 59 -0.894427 0.000000 -0.447214 -0.00002 REMARK 350 BIOMT1 60 0.947214 0.162460 -0.276393 0.00000 REMARK 350 BIOMT2 60 -0.162460 -0.500000 -0.850651 -0.00001 REMARK 350 BIOMT3 60 -0.276393 0.850651 -0.447214 0.00000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4B03 RELATED DB: PDB REMARK 900 6A ELECTRON CRYOMICROSCOPY STRUCTURE OF IMMATURE DENGUE VIRUS REMARK 900 SEROTYPE 1 REMARK 900 RELATED ID: EMD-2142 RELATED DB: EMDB REMARK 900 4.5A ELECTRON CRYOMICROSCOPY RECONSTRUCTION OF MATURE DENGUE VIRUS REMARK 900 SEROTYPE 1 REMARK 900 RELATED ID: EMD-2141 RELATED DB: EMDB REMARK 900 6A ELECTRON CRYOMICROSCOPY STRUCTURE OF IMMATURE DENGUE VIRUS REMARK 900 SEROTYPE 1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 LABORATORY STRAIN, HAS SEVERAL MUTATIONS COMPARED TO ITS REMARK 999 PART OF WHOLE POLYPROTEIN DESCRIBED IN AEM92304.1 REMARK 999 SEQUENCED AS A PART OF POLYPROTEIN ENCODED BY THE VIRAL REMARK 999 GENOME DBREF 4CCT A 1 339 UNP G3F5K5 G3F5K5_9FLAV 281 775 DBREF 4CCT B 1 339 UNP G3F5K5 G3F5K5_9FLAV 281 775 DBREF 4CCT C 1 339 UNP G3F5K5 G3F5K5_9FLAV 281 775 DBREF 4CCT D 1 74 UNP G3F5K5 G3F5K5_9FLAV 206 279 DBREF 4CCT E 1 74 UNP G3F5K5 G3F5K5_9FLAV 206 279 DBREF 4CCT F 1 74 UNP G3F5K5 G3F5K5_9FLAV 206 279 SEQADV 4CCT SER A 7 UNP G3F5K5 GLY 287 SEE REMARK 999 SEQADV 4CCT ALA A 17 UNP G3F5K5 GLY 297 SEE REMARK 999 SEQADV 4CCT THR A 18 UNP G3F5K5 ALA 298 SEE REMARK 999 SEQADV 4CCT GLY A 19 UNP G3F5K5 THR 299 SEE REMARK 999 SEQADV 4CCT SER B 7 UNP G3F5K5 GLY 287 SEE REMARK 999 SEQADV 4CCT ALA B 17 UNP G3F5K5 GLY 297 SEE REMARK 999 SEQADV 4CCT THR B 18 UNP G3F5K5 ALA 298 SEE REMARK 999 SEQADV 4CCT GLY B 19 UNP G3F5K5 THR 299 SEE REMARK 999 SEQADV 4CCT SER C 7 UNP G3F5K5 GLY 287 SEE REMARK 999 SEQADV 4CCT ALA C 17 UNP G3F5K5 GLY 297 SEE REMARK 999 SEQADV 4CCT THR C 18 UNP G3F5K5 ALA 298 SEE REMARK 999 SEQADV 4CCT GLY C 19 UNP G3F5K5 THR 299 SEE REMARK 999 SEQADV 4CCT TYR D 74 UNP G3F5K5 MET 279 SEE REMARK 999 SEQADV 4CCT TYR E 74 UNP G3F5K5 MET 279 SEE REMARK 999 SEQADV 4CCT TYR F 74 UNP G3F5K5 MET 279 SEE REMARK 999 SEQRES 1 A 495 MET ARG CYS VAL GLY ILE SER ASN ARG ASP PHE VAL GLU SEQRES 2 A 495 GLY LEU SER ALA THR GLY TRP VAL ASP VAL VAL LEU GLU SEQRES 3 A 495 HIS GLY SER CYS VAL THR THR MET ALA LYS ASP LYS PRO SEQRES 4 A 495 THR LEU ASP ILE GLU LEU LEU LYS THR GLU VAL THR ASN SEQRES 5 A 495 PRO ALA ILE LEU ARG LYS LEU CYS ILE GLU ALA LYS ILE SEQRES 6 A 495 SER ASN THR THR THR ASP SER ARG CYS PRO THR GLN GLY SEQRES 7 A 495 GLU ALA THR LEU VAL GLU GLU GLN ASP THR ASN PHE VAL SEQRES 8 A 495 CYS ARG ARG THR PHE VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 A 495 CYS GLY LEU PHE GLY LYS GLY SER LEU ILE THR CYS ALA SEQRES 10 A 495 LYS PHE LYS CYS VAL THR LYS LEU GLU GLY LYS ILE VAL SEQRES 11 A 495 GLN TYR GLU ASN LEU LYS TYR SER VAL ILE VAL THR VAL SEQRES 12 A 495 HIS THR GLY ASP GLN HIS GLN VAL GLY ASN GLU THR THR SEQRES 13 A 495 GLU HIS GLY THR THR ALA THR ILE THR PRO GLN ALA PRO SEQRES 14 A 495 THR SER GLU ILE GLN LEU THR ASP TYR GLY ALA LEU THR SEQRES 15 A 495 LEU ASP CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU SEQRES 16 A 495 MET VAL LEU LEU THR MET LYS GLU LYS SER TRP LEU VAL SEQRES 17 A 495 HIS LYS GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP THR SEQRES 18 A 495 SER GLY ALA SER THR SER GLN GLU THR TRP ASN ARG GLN SEQRES 19 A 495 ASP LEU LEU VAL THR PHE LYS THR ALA HIS ALA LYS LYS SEQRES 20 A 495 GLN GLU VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET SEQRES 21 A 495 HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN THR SER SEQRES 22 A 495 GLY THR THR THR ILE PHE ALA GLY HIS LEU LYS CYS ARG SEQRES 23 A 495 LEU LYS MET ASP LYS LEU THR LEU LYS GLY VAL SER TYR SEQRES 24 A 495 VAL MET CYS THR GLY SER PHE LYS LEU GLU LYS GLU VAL SEQRES 25 A 495 ALA GLU THR GLN HIS GLY THR VAL LEU VAL GLN VAL LYS SEQRES 26 A 495 TYR GLU GLY THR ASP ALA PRO CYS LYS ILE PRO PHE SER SEQRES 27 A 495 SER GLN ASP GLU LYS GLY VAL ILE GLN ASN GLY ARG LEU SEQRES 28 A 495 ILE THR ALA ASN PRO ILE VAL THR ASP LYS GLU LYS PRO SEQRES 29 A 495 VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY GLU SER TYR SEQRES 30 A 495 ILE VAL VAL GLY ALA GLY GLU LYS ALA LEU LYS LEU SER SEQRES 31 A 495 TRP PHE LYS LYS GLY SER SER ILE GLY LYS MET PHE GLU SEQRES 32 A 495 ALA THR ALA ARG GLY ALA ARG ARG MET ALA ILE LEU GLY SEQRES 33 A 495 ASP THR ALA TRP ASP PHE GLY SER ILE GLY GLY VAL PHE SEQRES 34 A 495 THR SER VAL GLY LYS LEU VAL HIS GLN ILE PHE GLY THR SEQRES 35 A 495 ALA TYR GLY VAL LEU PHE SER GLY VAL SER TRP THR MET SEQRES 36 A 495 LYS ILE GLY ILE GLY ILE LEU LEU THR TRP LEU GLY LEU SEQRES 37 A 495 ASN SER ARG SER THR SER LEU SER MET THR CYS ILE ALA SEQRES 38 A 495 VAL GLY MET VAL THR LEU TYR LEU GLY VAL MET VAL GLN SEQRES 39 A 495 ALA SEQRES 1 B 495 MET ARG CYS VAL GLY ILE SER ASN ARG ASP PHE VAL GLU SEQRES 2 B 495 GLY LEU SER ALA THR GLY TRP VAL ASP VAL VAL LEU GLU SEQRES 3 B 495 HIS GLY SER CYS VAL THR THR MET ALA LYS ASP LYS PRO SEQRES 4 B 495 THR LEU ASP ILE GLU LEU LEU LYS THR GLU VAL THR ASN SEQRES 5 B 495 PRO ALA ILE LEU ARG LYS LEU CYS ILE GLU ALA LYS ILE SEQRES 6 B 495 SER ASN THR THR THR ASP SER ARG CYS PRO THR GLN GLY SEQRES 7 B 495 GLU ALA THR LEU VAL GLU GLU GLN ASP THR ASN PHE VAL SEQRES 8 B 495 CYS ARG ARG THR PHE VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 B 495 CYS GLY LEU PHE GLY LYS GLY SER LEU ILE THR CYS ALA SEQRES 10 B 495 LYS PHE LYS CYS VAL THR LYS LEU GLU GLY LYS ILE VAL SEQRES 11 B 495 GLN TYR GLU ASN LEU LYS TYR SER VAL ILE VAL THR VAL SEQRES 12 B 495 HIS THR GLY ASP GLN HIS GLN VAL GLY ASN GLU THR THR SEQRES 13 B 495 GLU HIS GLY THR THR ALA THR ILE THR PRO GLN ALA PRO SEQRES 14 B 495 THR SER GLU ILE GLN LEU THR ASP TYR GLY ALA LEU THR SEQRES 15 B 495 LEU ASP CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU SEQRES 16 B 495 MET VAL LEU LEU THR MET LYS GLU LYS SER TRP LEU VAL SEQRES 17 B 495 HIS LYS GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP THR SEQRES 18 B 495 SER GLY ALA SER THR SER GLN GLU THR TRP ASN ARG GLN SEQRES 19 B 495 ASP LEU LEU VAL THR PHE LYS THR ALA HIS ALA LYS LYS SEQRES 20 B 495 GLN GLU VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET SEQRES 21 B 495 HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN THR SER SEQRES 22 B 495 GLY THR THR THR ILE PHE ALA GLY HIS LEU LYS CYS ARG SEQRES 23 B 495 LEU LYS MET ASP LYS LEU THR LEU LYS GLY VAL SER TYR SEQRES 24 B 495 VAL MET CYS THR GLY SER PHE LYS LEU GLU LYS GLU VAL SEQRES 25 B 495 ALA GLU THR GLN HIS GLY THR VAL LEU VAL GLN VAL LYS SEQRES 26 B 495 TYR GLU GLY THR ASP ALA PRO CYS LYS ILE PRO PHE SER SEQRES 27 B 495 SER GLN ASP GLU LYS GLY VAL ILE GLN ASN GLY ARG LEU SEQRES 28 B 495 ILE THR ALA ASN PRO ILE VAL THR ASP LYS GLU LYS PRO SEQRES 29 B 495 VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY GLU SER TYR SEQRES 30 B 495 ILE VAL VAL GLY ALA GLY GLU LYS ALA LEU LYS LEU SER SEQRES 31 B 495 TRP PHE LYS LYS GLY SER SER ILE GLY LYS MET PHE GLU SEQRES 32 B 495 ALA THR ALA ARG GLY ALA ARG ARG MET ALA ILE LEU GLY SEQRES 33 B 495 ASP THR ALA TRP ASP PHE GLY SER ILE GLY GLY VAL PHE SEQRES 34 B 495 THR SER VAL GLY LYS LEU VAL HIS GLN ILE PHE GLY THR SEQRES 35 B 495 ALA TYR GLY VAL LEU PHE SER GLY VAL SER TRP THR MET SEQRES 36 B 495 LYS ILE GLY ILE GLY ILE LEU LEU THR TRP LEU GLY LEU SEQRES 37 B 495 ASN SER ARG SER THR SER LEU SER MET THR CYS ILE ALA SEQRES 38 B 495 VAL GLY MET VAL THR LEU TYR LEU GLY VAL MET VAL GLN SEQRES 39 B 495 ALA SEQRES 1 C 495 MET ARG CYS VAL GLY ILE SER ASN ARG ASP PHE VAL GLU SEQRES 2 C 495 GLY LEU SER ALA THR GLY TRP VAL ASP VAL VAL LEU GLU SEQRES 3 C 495 HIS GLY SER CYS VAL THR THR MET ALA LYS ASP LYS PRO SEQRES 4 C 495 THR LEU ASP ILE GLU LEU LEU LYS THR GLU VAL THR ASN SEQRES 5 C 495 PRO ALA ILE LEU ARG LYS LEU CYS ILE GLU ALA LYS ILE SEQRES 6 C 495 SER ASN THR THR THR ASP SER ARG CYS PRO THR GLN GLY SEQRES 7 C 495 GLU ALA THR LEU VAL GLU GLU GLN ASP THR ASN PHE VAL SEQRES 8 C 495 CYS ARG ARG THR PHE VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 C 495 CYS GLY LEU PHE GLY LYS GLY SER LEU ILE THR CYS ALA SEQRES 10 C 495 LYS PHE LYS CYS VAL THR LYS LEU GLU GLY LYS ILE VAL SEQRES 11 C 495 GLN TYR GLU ASN LEU LYS TYR SER VAL ILE VAL THR VAL SEQRES 12 C 495 HIS THR GLY ASP GLN HIS GLN VAL GLY ASN GLU THR THR SEQRES 13 C 495 GLU HIS GLY THR THR ALA THR ILE THR PRO GLN ALA PRO SEQRES 14 C 495 THR SER GLU ILE GLN LEU THR ASP TYR GLY ALA LEU THR SEQRES 15 C 495 LEU ASP CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU SEQRES 16 C 495 MET VAL LEU LEU THR MET LYS GLU LYS SER TRP LEU VAL SEQRES 17 C 495 HIS LYS GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP THR SEQRES 18 C 495 SER GLY ALA SER THR SER GLN GLU THR TRP ASN ARG GLN SEQRES 19 C 495 ASP LEU LEU VAL THR PHE LYS THR ALA HIS ALA LYS LYS SEQRES 20 C 495 GLN GLU VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET SEQRES 21 C 495 HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN THR SER SEQRES 22 C 495 GLY THR THR THR ILE PHE ALA GLY HIS LEU LYS CYS ARG SEQRES 23 C 495 LEU LYS MET ASP LYS LEU THR LEU LYS GLY VAL SER TYR SEQRES 24 C 495 VAL MET CYS THR GLY SER PHE LYS LEU GLU LYS GLU VAL SEQRES 25 C 495 ALA GLU THR GLN HIS GLY THR VAL LEU VAL GLN VAL LYS SEQRES 26 C 495 TYR GLU GLY THR ASP ALA PRO CYS LYS ILE PRO PHE SER SEQRES 27 C 495 SER GLN ASP GLU LYS GLY VAL ILE GLN ASN GLY ARG LEU SEQRES 28 C 495 ILE THR ALA ASN PRO ILE VAL THR ASP LYS GLU LYS PRO SEQRES 29 C 495 VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY GLU SER TYR SEQRES 30 C 495 ILE VAL VAL GLY ALA GLY GLU LYS ALA LEU LYS LEU SER SEQRES 31 C 495 TRP PHE LYS LYS GLY SER SER ILE GLY LYS MET PHE GLU SEQRES 32 C 495 ALA THR ALA ARG GLY ALA ARG ARG MET ALA ILE LEU GLY SEQRES 33 C 495 ASP THR ALA TRP ASP PHE GLY SER ILE GLY GLY VAL PHE SEQRES 34 C 495 THR SER VAL GLY LYS LEU VAL HIS GLN ILE PHE GLY THR SEQRES 35 C 495 ALA TYR GLY VAL LEU PHE SER GLY VAL SER TRP THR MET SEQRES 36 C 495 LYS ILE GLY ILE GLY ILE LEU LEU THR TRP LEU GLY LEU SEQRES 37 C 495 ASN SER ARG SER THR SER LEU SER MET THR CYS ILE ALA SEQRES 38 C 495 VAL GLY MET VAL THR LEU TYR LEU GLY VAL MET VAL GLN SEQRES 39 C 495 ALA SEQRES 1 D 74 SER VAL ALA LEU ALA PRO HIS VAL GLY LEU GLY LEU GLU SEQRES 2 D 74 THR ARG THR GLU THR TRP MET SER SER GLU GLY ALA TRP SEQRES 3 D 74 LYS GLN ILE GLN LYS VAL GLU THR TRP ALA LEU GLY HIS SEQRES 4 D 74 PRO GLY PHE THR VAL ILE ALA LEU PHE LEU ALA HIS ALA SEQRES 5 D 74 ILE GLY THR SER ILE THR GLN LYS GLY ILE ILE PHE ILE SEQRES 6 D 74 LEU LEU MET LEU VAL THR PRO SER TYR SEQRES 1 E 74 SER VAL ALA LEU ALA PRO HIS VAL GLY LEU GLY LEU GLU SEQRES 2 E 74 THR ARG THR GLU THR TRP MET SER SER GLU GLY ALA TRP SEQRES 3 E 74 LYS GLN ILE GLN LYS VAL GLU THR TRP ALA LEU GLY HIS SEQRES 4 E 74 PRO GLY PHE THR VAL ILE ALA LEU PHE LEU ALA HIS ALA SEQRES 5 E 74 ILE GLY THR SER ILE THR GLN LYS GLY ILE ILE PHE ILE SEQRES 6 E 74 LEU LEU MET LEU VAL THR PRO SER TYR SEQRES 1 F 74 SER VAL ALA LEU ALA PRO HIS VAL GLY LEU GLY LEU GLU SEQRES 2 F 74 THR ARG THR GLU THR TRP MET SER SER GLU GLY ALA TRP SEQRES 3 F 74 LYS GLN ILE GLN LYS VAL GLU THR TRP ALA LEU GLY HIS SEQRES 4 F 74 PRO GLY PHE THR VAL ILE ALA LEU PHE LEU ALA HIS ALA SEQRES 5 F 74 ILE GLY THR SER ILE THR GLN LYS GLY ILE ILE PHE ILE SEQRES 6 F 74 LEU LEU MET LEU VAL THR PRO SER TYR CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000