HEADER TRANSCRIPTION 04-DEC-13 4CHU TITLE E. COLI ISCR-DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR ISCR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ISCR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HYA PROMOTER FRAGMENT; COMPND 9 CHAIN: C; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: HYA PROMOTER FRAGMENT; COMPND 12 CHAIN: D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 ATCC: 29425; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETZ2_1A; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 14 ORGANISM_TAXID: 83333; SOURCE 15 ATCC: 29425; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 19 ORGANISM_TAXID: 83333; SOURCE 20 ATCC: 29425 KEYWDS TRANSCRIPTION, TRANSCRIPTION REGULATION, DNA RECOGNITION, KEYWDS 2 HELIX-TURN-HELIX MOTIF, RRF2-LIKE REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR J.A.SANTOS,S.MACEDO-RIBEIRO,P.J.B.PEREIRA REVDAT 3 25-JUN-14 4CHU 1 JRNL REVDAT 2 04-JUN-14 4CHU 1 JRNL REVDAT 1 28-MAY-14 4CHU 0 JRNL AUTH J.A.SANTOS,N.ALONSO-GARCIA,S.MACEDO-RIBEIRO,P.J.B.PEREIRA JRNL TITL THE UNIQUE REGULATION OF IRON-SULFUR CLUSTER BIOGENESIS IN JRNL TITL 2 A GRAM-POSITIVE BACTERIUM. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 E2251 2014 JRNL REFN ISSN 0027-8424 JRNL PMID 24847070 JRNL DOI 10.1073/PNAS.1322728111 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.489 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.973 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.34 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.98 REMARK 3 NUMBER OF REFLECTIONS : 23250 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.2090 REMARK 3 R VALUE (WORKING SET) : 0.2067 REMARK 3 FREE R VALUE : 0.2508 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 1193 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9812 - 5.1748 1.00 2652 134 0.1795 0.2132 REMARK 3 2 5.1748 - 4.1082 1.00 2505 124 0.1649 0.2193 REMARK 3 3 4.1082 - 3.5891 1.00 2485 136 0.1825 0.2303 REMARK 3 4 3.5891 - 3.2611 0.98 2389 146 0.2110 0.2425 REMARK 3 5 3.2611 - 3.0274 0.99 2410 146 0.2346 0.3119 REMARK 3 6 3.0274 - 2.8489 1.00 2461 115 0.2654 0.2902 REMARK 3 7 2.8489 - 2.7063 1.00 2416 123 0.2729 0.2679 REMARK 3 8 2.7063 - 2.5885 1.00 2426 128 0.3085 0.3600 REMARK 3 9 2.5885 - 2.4888 0.95 2313 141 0.3395 0.3826 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.33 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3136 REMARK 3 ANGLE : 1.381 4468 REMARK 3 CHIRALITY : 0.055 515 REMARK 3 PLANARITY : 0.005 389 REMARK 3 DIHEDRAL : 26.628 1233 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 0 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7219 85.2081 -8.7488 REMARK 3 T TENSOR REMARK 3 T11: 0.1741 T22: 0.2368 REMARK 3 T33: 0.3412 T12: -0.0292 REMARK 3 T13: -0.0110 T23: -0.0693 REMARK 3 L TENSOR REMARK 3 L11: 8.4864 L22: 6.1295 REMARK 3 L33: 6.4923 L12: 0.1345 REMARK 3 L13: 1.2679 L23: 0.3563 REMARK 3 S TENSOR REMARK 3 S11: -0.1456 S12: 0.0591 S13: -0.2168 REMARK 3 S21: 0.2311 S22: -0.0928 S23: -0.1674 REMARK 3 S31: 0.0335 S32: 0.2659 S33: 0.2084 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 39 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3679 90.1005 -0.9307 REMARK 3 T TENSOR REMARK 3 T11: 0.2224 T22: 0.4592 REMARK 3 T33: 0.3340 T12: -0.0265 REMARK 3 T13: 0.0109 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 2.1606 L22: 2.4656 REMARK 3 L33: 4.4913 L12: -0.2634 REMARK 3 L13: -0.5189 L23: 2.4888 REMARK 3 S TENSOR REMARK 3 S11: -0.0733 S12: -0.1503 S13: 0.0198 REMARK 3 S21: -0.0529 S22: -0.1379 S23: 0.1881 REMARK 3 S31: -0.0761 S32: -0.7079 S33: 0.1756 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 123 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9515 102.5390 -1.3346 REMARK 3 T TENSOR REMARK 3 T11: 0.5588 T22: 0.6843 REMARK 3 T33: 0.4997 T12: -0.1129 REMARK 3 T13: 0.0255 T23: -0.1387 REMARK 3 L TENSOR REMARK 3 L11: 5.8361 L22: 2.5726 REMARK 3 L33: 5.8043 L12: -0.9546 REMARK 3 L13: 0.2889 L23: -3.7888 REMARK 3 S TENSOR REMARK 3 S11: 0.1296 S12: -0.0795 S13: 1.2404 REMARK 3 S21: 0.8012 S22: -0.3695 S23: -0.4654 REMARK 3 S31: -1.5880 S32: 0.3374 S33: 0.3545 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 1 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5909 89.9260 21.8908 REMARK 3 T TENSOR REMARK 3 T11: 0.6593 T22: 0.8230 REMARK 3 T33: 0.4273 T12: -0.0985 REMARK 3 T13: -0.0041 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 5.8833 L22: 0.8980 REMARK 3 L33: 4.0804 L12: -0.3042 REMARK 3 L13: -4.3231 L23: -0.4203 REMARK 3 S TENSOR REMARK 3 S11: -0.1115 S12: 0.1943 S13: -0.3803 REMARK 3 S21: -0.3552 S22: 0.0219 S23: -0.0449 REMARK 3 S31: 0.7984 S32: -0.0997 S33: 0.0438 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 21 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7499 87.7062 29.7360 REMARK 3 T TENSOR REMARK 3 T11: 0.7978 T22: 1.0627 REMARK 3 T33: 0.3955 T12: 0.0485 REMARK 3 T13: 0.0008 T23: 0.0719 REMARK 3 L TENSOR REMARK 3 L11: 2.3763 L22: 3.2643 REMARK 3 L33: 7.2945 L12: 0.3646 REMARK 3 L13: 0.2999 L23: -0.5275 REMARK 3 S TENSOR REMARK 3 S11: 0.1067 S12: -0.8752 S13: -0.1780 REMARK 3 S21: 0.6019 S22: -0.1394 S23: -0.0113 REMARK 3 S31: 1.2974 S32: 0.7566 S33: -0.0133 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 84 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2600 94.0811 5.9066 REMARK 3 T TENSOR REMARK 3 T11: 0.3398 T22: 0.5280 REMARK 3 T33: 0.4166 T12: -0.0497 REMARK 3 T13: -0.0176 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 3.8907 L22: 2.5097 REMARK 3 L33: 3.9252 L12: -0.5887 REMARK 3 L13: -0.1662 L23: 1.7796 REMARK 3 S TENSOR REMARK 3 S11: -0.0633 S12: -0.6239 S13: 0.0217 REMARK 3 S21: 0.2516 S22: 0.3421 S23: -0.1859 REMARK 3 S31: 0.2009 S32: 0.8123 S33: -0.2616 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN C AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2310 72.5787 33.5475 REMARK 3 T TENSOR REMARK 3 T11: 1.9517 T22: 1.4837 REMARK 3 T33: 0.5674 T12: 0.0984 REMARK 3 T13: -0.1776 T23: 0.2662 REMARK 3 L TENSOR REMARK 3 L11: 2.1514 L22: 0.2294 REMARK 3 L33: 2.3888 L12: 0.6716 REMARK 3 L13: -0.9738 L23: -0.5213 REMARK 3 S TENSOR REMARK 3 S11: 0.0884 S12: -0.3236 S13: -0.8429 REMARK 3 S21: -0.0877 S22: 0.5228 S23: -0.0905 REMARK 3 S31: 1.9946 S32: -0.2722 S33: -0.2477 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN C AND (RESID 13 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5468 71.6309 -9.2071 REMARK 3 T TENSOR REMARK 3 T11: 0.6693 T22: 0.7227 REMARK 3 T33: 0.5876 T12: -0.0509 REMARK 3 T13: 0.0158 T23: -0.1188 REMARK 3 L TENSOR REMARK 3 L11: 4.3242 L22: 4.1484 REMARK 3 L33: 2.6538 L12: 0.3378 REMARK 3 L13: 2.6112 L23: 0.2267 REMARK 3 S TENSOR REMARK 3 S11: 0.3045 S12: -0.0516 S13: -0.6968 REMARK 3 S21: -0.1134 S22: -0.0567 S23: 0.4338 REMARK 3 S31: 1.4618 S32: -0.5672 S33: -0.3431 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN D AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1052 70.5847 -10.4697 REMARK 3 T TENSOR REMARK 3 T11: 0.7181 T22: 0.7043 REMARK 3 T33: 0.5520 T12: 0.0080 REMARK 3 T13: -0.1184 T23: -0.1053 REMARK 3 L TENSOR REMARK 3 L11: 2.3097 L22: 3.6019 REMARK 3 L33: 6.4795 L12: -0.1805 REMARK 3 L13: 1.2043 L23: -2.2261 REMARK 3 S TENSOR REMARK 3 S11: 0.3544 S12: 0.1629 S13: -0.8488 REMARK 3 S21: -0.0259 S22: 0.3958 S23: 0.2708 REMARK 3 S31: 1.2829 S32: 0.4251 S33: -0.6874 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN D AND (RESID 17 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8746 72.3022 32.5085 REMARK 3 T TENSOR REMARK 3 T11: 1.8305 T22: 1.5211 REMARK 3 T33: 0.7161 T12: -0.0096 REMARK 3 T13: 0.0857 T23: 0.3266 REMARK 3 L TENSOR REMARK 3 L11: 1.4434 L22: 0.6739 REMARK 3 L33: 6.1284 L12: 0.3916 REMARK 3 L13: 2.8778 L23: 1.2579 REMARK 3 S TENSOR REMARK 3 S11: -0.0438 S12: -0.8536 S13: -0.7670 REMARK 3 S21: -0.0732 S22: 0.2864 S23: 0.0974 REMARK 3 S31: 2.4428 S32: 0.5923 S33: 0.0413 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 SELECTION : CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 RESTRAINED TORSIONS: 960 REMARK 3 BELOW LIMIT RMSD : 1.417 REMARK 3 ALL RESTRAINT RMSD : 17.737 REMARK 3 HISTOGRAM OF DIFFERENCES UNDER LIMIT: REMARK 3 0.000 - 1.500: 725 REMARK 3 1.500 - 3.000: 155 REMARK 3 3.000 - 4.500: 29 REMARK 3 4.500 - 6.000: 10 REMARK 3 6.000 - 7.500: 3 REMARK 3 7.500 - 9.000: 0 REMARK 3 9.000 - 10.500: 0 REMARK 3 10.500 - 12.000: 0 REMARK 3 12.000 - 13.500: 0 REMARK 3 13.500 - 15.000: 0 REMARK 3 HISTOGRAM OF DIFFERENCES OVER LIMIT: REMARK 3 15.000 - 31.200: 5 REMARK 3 31.200 - 47.400: 4 REMARK 3 47.400 - 63.600: 7 REMARK 3 63.600 - 79.800: 5 REMARK 3 79.800 - 96.000: 9 REMARK 3 96.000 - 112.200: 0 REMARK 3 112.200 - 128.400: 2 REMARK 3 128.400 - 144.600: 2 REMARK 3 144.600 - 160.800: 2 REMARK 3 160.800 - 177.000: 2 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CHU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-DEC-13. REMARK 100 THE PDBE ID CODE IS EBI-59147. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23387 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.49 REMARK 200 RESOLUTION RANGE LOW (A) : 46.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.7 REMARK 200 R MERGE (I) : 0.10 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.60 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.8 REMARK 200 R MERGE FOR SHELL (I) : 0.91 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.50 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: T. POTENS ISCR REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.7 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRIC ACID PH 4.0, 0.1M REMARK 280 LICL, 20% (W/V) PEG6K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.50750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.71050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.91750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.71050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.50750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.91750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 89 REMARK 465 THR A 90 REMARK 465 ARG A 91 REMARK 465 SER A 92 REMARK 465 GLN A 93 REMARK 465 GLY A 94 REMARK 465 LYS A 95 REMARK 465 GLY A 96 REMARK 465 GLY A 97 REMARK 465 SER A 98 REMARK 465 GLN A 99 REMARK 465 GLY A 100 REMARK 465 GLY A 101 REMARK 465 ASP A 102 REMARK 465 GLY A 140 REMARK 465 ARG A 141 REMARK 465 GLN A 142 REMARK 465 HIS A 143 REMARK 465 THR A 144 REMARK 465 HIS A 145 REMARK 465 ASP A 146 REMARK 465 ALA A 147 REMARK 465 PRO A 148 REMARK 465 ARG A 149 REMARK 465 THR A 150 REMARK 465 ARG A 151 REMARK 465 THR A 152 REMARK 465 GLN A 153 REMARK 465 ASP A 154 REMARK 465 ALA A 155 REMARK 465 ILE A 156 REMARK 465 ASP A 157 REMARK 465 VAL A 158 REMARK 465 LYS A 159 REMARK 465 LEU A 160 REMARK 465 ARG A 161 REMARK 465 ALA A 162 REMARK 465 MET B 0 REMARK 465 GLU B 85 REMARK 465 SER B 86 REMARK 465 VAL B 87 REMARK 465 ASP B 88 REMARK 465 ALA B 89 REMARK 465 THR B 90 REMARK 465 ARG B 91 REMARK 465 SER B 92 REMARK 465 LEU B 136 REMARK 465 ASP B 137 REMARK 465 VAL B 138 REMARK 465 SER B 139 REMARK 465 GLY B 140 REMARK 465 ARG B 141 REMARK 465 GLN B 142 REMARK 465 HIS B 143 REMARK 465 THR B 144 REMARK 465 HIS B 145 REMARK 465 ASP B 146 REMARK 465 ALA B 147 REMARK 465 PRO B 148 REMARK 465 ARG B 149 REMARK 465 THR B 150 REMARK 465 ARG B 151 REMARK 465 THR B 152 REMARK 465 GLN B 153 REMARK 465 ASP B 154 REMARK 465 ALA B 155 REMARK 465 ILE B 156 REMARK 465 ASP B 157 REMARK 465 VAL B 158 REMARK 465 LYS B 159 REMARK 465 LEU B 160 REMARK 465 ARG B 161 REMARK 465 ALA B 162 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 ASP A 88 CG OD1 OD2 REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 LEU A 136 CG CD1 CD2 REMARK 470 VAL A 138 CB CG1 CG2 REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 GLU B 33 CB CG CD OE1 OE2 REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 LYS B 69 CD CE NZ REMARK 470 GLN B 93 CG CD OE1 NE2 REMARK 470 LYS B 95 CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASP A 88 C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O5' DG C 1 O3' DG C 27 2575 2.13 REMARK 500 O5' DC D 1 O3' DT D 27 2574 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC C 6 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DC C 7 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DA C 10 C3' - C2' - C1' ANGL. DEV. = -5.3 DEGREES REMARK 500 DC C 11 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 DT C 18 N3 - C4 - O4 ANGL. DEV. = 3.6 DEGREES REMARK 500 DT C 20 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG C 22 O4' - C1' - N9 ANGL. DEV. = 4.9 DEGREES REMARK 500 DT C 23 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DT C 25 O4' - C1' - N1 ANGL. DEV. = -6.0 DEGREES REMARK 500 DC D 1 C3' - C2' - C1' ANGL. DEV. = -6.3 DEGREES REMARK 500 DA D 5 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC D 7 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC D 16 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG D 18 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DG D 22 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG D 23 O4' - C1' - N9 ANGL. DEV. = 6.3 DEGREES REMARK 500 DA D 24 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT D 26 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 DT D 27 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 4 -168.88 -112.53 REMARK 500 LEU A 105 -36.15 79.13 REMARK 500 VAL A 135 -40.13 58.98 REMARK 500 THR B 4 -169.86 -111.85 REMARK 500 ALA B 23 51.76 -118.83 REMARK 500 ASP B 102 12.61 -140.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CIC RELATED DB: PDB REMARK 900 T. POTENS ISCR REMARK 999 REMARK 999 SEQUENCE REMARK 999 INSERTION OF G BETWEEN RESIDUES 1 AND 2. MUTATIONS C92S, REMARK 999 C98S, C104S. REMARK 999 ADDITIONAL 5' G REMARK 999 ADDITIONAL 5' C DBREF 4CHU A 0 162 UNP C3SZN7 C3SZN7_ECOLX 1 162 DBREF 4CHU B 0 162 UNP C3SZN7 C3SZN7_ECOLX 1 162 DBREF1 4CHU C 1 27 GB HG738867 DBREF2 4CHU C 557270520 934122 934147 DBREF1 4CHU D 1 27 GB HG738867 DBREF2 4CHU D 557270520 934122 934147 SEQADV 4CHU GLY A 1 UNP C3SZN7 INSERTION SEQADV 4CHU SER A 92 UNP C3SZN7 CYS 92 ENGINEERED MUTATION SEQADV 4CHU SER A 98 UNP C3SZN7 CYS 98 ENGINEERED MUTATION SEQADV 4CHU SER A 104 UNP C3SZN7 CYS 104 ENGINEERED MUTATION SEQADV 4CHU GLY B 1 UNP C3SZN7 INSERTION SEQADV 4CHU SER B 92 UNP C3SZN7 CYS 92 ENGINEERED MUTATION SEQADV 4CHU SER B 98 UNP C3SZN7 CYS 98 ENGINEERED MUTATION SEQADV 4CHU SER B 104 UNP C3SZN7 CYS 104 ENGINEERED MUTATION SEQADV 4CHU DG C 1 GB HG738867 INSERTION SEQADV 4CHU DC D 1 GB HG738867 INSERTION SEQRES 1 A 163 MET GLY ARG LEU THR SER LYS GLY ARG TYR ALA VAL THR SEQRES 2 A 163 ALA MET LEU ASP VAL ALA LEU ASN SER GLU ALA GLY PRO SEQRES 3 A 163 VAL PRO LEU ALA ASP ILE SER GLU ARG GLN GLY ILE SER SEQRES 4 A 163 LEU SER TYR LEU GLU GLN LEU PHE SER ARG LEU ARG LYS SEQRES 5 A 163 ASN GLY LEU VAL SER SER VAL ARG GLY PRO GLY GLY GLY SEQRES 6 A 163 TYR LEU LEU GLY LYS ASP ALA SER SER ILE ALA VAL GLY SEQRES 7 A 163 GLU VAL ILE SER ALA VAL ASP GLU SER VAL ASP ALA THR SEQRES 8 A 163 ARG SER GLN GLY LYS GLY GLY SER GLN GLY GLY ASP LYS SEQRES 9 A 163 SER LEU THR HIS ALA LEU TRP ARG ASP LEU SER ASP ARG SEQRES 10 A 163 LEU THR GLY PHE LEU ASN ASN ILE THR LEU GLY GLU LEU SEQRES 11 A 163 VAL ASN ASN GLN GLU VAL LEU ASP VAL SER GLY ARG GLN SEQRES 12 A 163 HIS THR HIS ASP ALA PRO ARG THR ARG THR GLN ASP ALA SEQRES 13 A 163 ILE ASP VAL LYS LEU ARG ALA SEQRES 1 B 163 MET GLY ARG LEU THR SER LYS GLY ARG TYR ALA VAL THR SEQRES 2 B 163 ALA MET LEU ASP VAL ALA LEU ASN SER GLU ALA GLY PRO SEQRES 3 B 163 VAL PRO LEU ALA ASP ILE SER GLU ARG GLN GLY ILE SER SEQRES 4 B 163 LEU SER TYR LEU GLU GLN LEU PHE SER ARG LEU ARG LYS SEQRES 5 B 163 ASN GLY LEU VAL SER SER VAL ARG GLY PRO GLY GLY GLY SEQRES 6 B 163 TYR LEU LEU GLY LYS ASP ALA SER SER ILE ALA VAL GLY SEQRES 7 B 163 GLU VAL ILE SER ALA VAL ASP GLU SER VAL ASP ALA THR SEQRES 8 B 163 ARG SER GLN GLY LYS GLY GLY SER GLN GLY GLY ASP LYS SEQRES 9 B 163 SER LEU THR HIS ALA LEU TRP ARG ASP LEU SER ASP ARG SEQRES 10 B 163 LEU THR GLY PHE LEU ASN ASN ILE THR LEU GLY GLU LEU SEQRES 11 B 163 VAL ASN ASN GLN GLU VAL LEU ASP VAL SER GLY ARG GLN SEQRES 12 B 163 HIS THR HIS ASP ALA PRO ARG THR ARG THR GLN ASP ALA SEQRES 13 B 163 ILE ASP VAL LYS LEU ARG ALA SEQRES 1 C 27 DG DA DA DA DT DC DC DA DC DA DC DA DG SEQRES 2 C 27 DT DT DT DG DT DA DT DT DG DT DT DT DT SEQRES 3 C 27 DG SEQRES 1 D 27 DC DC DA DA DA DA DC DA DA DT DA DC DA SEQRES 2 D 27 DA DA DC DT DG DT DG DT DG DG DA DT DT SEQRES 3 D 27 DT FORMUL 5 HOH *15(H2 O) HELIX 1 1 THR A 4 ASN A 20 1 17 HELIX 2 2 PRO A 27 GLY A 36 1 10 HELIX 3 3 SER A 38 ASN A 52 1 15 HELIX 4 4 ASP A 70 ILE A 74 5 5 HELIX 5 5 ALA A 75 GLU A 85 1 11 HELIX 6 6 LEU A 105 ASN A 123 1 19 HELIX 7 7 THR A 125 ASN A 131 1 7 HELIX 8 8 THR B 4 SER B 21 1 18 HELIX 9 9 PRO B 27 GLY B 36 1 10 HELIX 10 10 SER B 38 ASN B 52 1 15 HELIX 11 11 ASP B 70 ILE B 74 5 5 HELIX 12 12 ALA B 75 ASP B 84 1 10 HELIX 13 13 GLY B 96 GLY B 100 5 5 HELIX 14 14 ASP B 102 ASN B 123 1 22 HELIX 15 15 THR B 125 GLU B 134 1 10 SHEET 1 AA 2 VAL A 55 VAL A 58 0 SHEET 2 AA 2 GLY A 64 LEU A 67 -1 O GLY A 64 N VAL A 58 SHEET 1 BA 2 VAL B 55 VAL B 58 0 SHEET 2 BA 2 GLY B 64 LEU B 67 -1 O GLY B 64 N VAL B 58 CISPEP 1 GLY B 62 GLY B 63 0 13.59 CRYST1 49.015 75.835 173.421 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020402 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013187 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005766 0.00000 MTRIX1 1 -0.906403 0.421922 -0.020374 -8.47020 1 MTRIX2 1 0.420988 0.898331 -0.125578 3.36430 1 MTRIX3 1 -0.034682 -0.122402 -0.991874 29.73060 1