HEADER HYDROLASE 06-DEC-13 4CI7 TITLE THE CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE AND LECTIN-LIKE TITLE 2 DOMAINS OF CWP84, A SURFACE LAYER ASSOCIATED PROTEIN OF CLOSTRIDIUM TITLE 3 DIFFICILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL SURFACE PROTEIN (PUTATIVE CELL SURFACE-ASSOCIATED COMPND 3 CYSTEINE PROTEASE); COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: PROPEPTIDE, CYSTEINE PROTEASE DOMAIN, LECTIN-LIKE DOMAIN, COMPND 6 RESIDUES 33-497; COMPND 7 SYNONYM: CWP84; COMPND 8 EC: 3.4.22.15; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM DIFFICILE; SOURCE 3 ORGANISM_TAXID: 367459; SOURCE 4 STRAIN: QCD-32G58; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS HYDROLASE, S-LAYER, CWP, CELL WALL PROTEIN, SURFACE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.J.BRADSHAW,J.M.KIRBY,N.THIYAGARAJAN,C.J.CHAMBERS,A.H.DAVIES, AUTHOR 2 A.K.ROBERTS,C.C.SHONE,K.R.ACHARYA REVDAT 3 23-JUL-14 4CI7 1 JRNL REVDAT 2 09-JUL-14 4CI7 1 JRNL REVDAT 1 14-MAY-14 4CI7 0 JRNL AUTH W.J.BRADSHAW,J.M.KIRBY,N.THIYAGARAJAN,C.J.CHAMBERS, JRNL AUTH 2 A.H.DAVIES,A.K.ROBERTS,C.C.SHONE,K.R.ACHARYA JRNL TITL THE STRUCTURE OF THE CYSTEINE PROTEASE AND LECTIN-LIKE JRNL TITL 2 DOMAINS OF CWP84, A SURFACE LAYER-ASSOCIATED PROTEIN FROM JRNL TITL 3 CLOSTRIDIUM DIFFICILE JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 1983 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25004975 JRNL DOI 10.1107/S1399004714009997 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU, REMARK 3 STEINER,NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 125.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.72 REMARK 3 NUMBER OF REFLECTIONS : 156435 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.13970 REMARK 3 R VALUE (WORKING SET) : 0.13814 REMARK 3 FREE R VALUE : 0.16909 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 8310 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.400 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.436 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7548 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.230 REMARK 3 BIN FREE R VALUE SET COUNT : 354 REMARK 3 BIN FREE R VALUE : 0.261 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 927 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.361 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.15 REMARK 3 B22 (A**2) : -1.04 REMARK 3 B33 (A**2) : -1.07 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : -0.28 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.066 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.058 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.380 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7696 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 7093 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10464 ; 1.340 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16508 ; 0.853 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 969 ;11.447 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 343 ;33.293 ;25.423 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1328 ;12.904 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;20.132 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1147 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8697 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1715 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3713 ; 1.629 ; 1.459 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3712 ; 1.608 ; 1.457 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4655 ; 2.006 ; 2.195 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4656 ; 2.006 ; 2.196 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3983 ; 2.731 ; 1.787 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3983 ; 2.731 ; 1.787 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5776 ; 3.198 ; 2.538 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9710 ; 4.099 ;13.854 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9218 ; 3.716 ;13.129 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 14783 ; 2.543 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 199 ;31.904 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 15323 ;11.413 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4CI7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-MAR-14. REMARK 100 THE PDBE ID CODE IS EBI-59164. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-12; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : DIAMOND; DIAMOND REMARK 200 BEAMLINE : I02; I03 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795, 0.9793, 0.9795; 0.9717, REMARK 200 0.9879 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS 6M); PIXEL REMARK 200 (PILATUS 6M) REMARK 200 DETECTOR MANUFACTURER : DECTRIS; DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 170213 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.4 REMARK 200 RESOLUTION RANGE LOW (A) : 48.15 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 4.8 REMARK 200 R MERGE (I) : 0.099 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.4 REMARK 200 R MERGE FOR SHELL (I) : 0.258 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.2 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CRANK REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: STRUCTURE SOLVED TO 1.9 A USING SEMET MAD, THEN REFINED REMARK 200 WITH NATIVE DATA TO 1.3 A REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.8 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULPHATE, 30% (V/V) PEG REMARK 280 4000, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.74500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 28 REMARK 465 PRO A 29 REMARK 465 LEU A 30 REMARK 465 ASN A 80 REMARK 465 LYS A 81 REMARK 465 GLY A 82 REMARK 465 ARG A 83 REMARK 465 SER A 84 REMARK 465 SER A 85 REMARK 465 LEU A 86 REMARK 465 PRO A 87 REMARK 465 SER A 88 REMARK 465 ALA A 89 REMARK 465 TYR A 90 REMARK 465 GLY B 28 REMARK 465 PRO B 29 REMARK 465 LEU B 30 REMARK 465 GLY B 31 REMARK 465 ASN B 80 REMARK 465 LYS B 81 REMARK 465 GLY B 82 REMARK 465 ARG B 83 REMARK 465 SER B 84 REMARK 465 SER B 85 REMARK 465 LEU B 86 REMARK 465 PRO B 87 REMARK 465 SER B 88 REMARK 465 ALA B 89 REMARK 465 TYR B 90 REMARK 465 LYS B 91 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 105 O HOH A 2108 2.07 REMARK 500 NZ A LYS A 132 O HOH A 2168 2.13 REMARK 500 OG B SER A 164 O HOH A 2050 2.14 REMARK 500 OD2 ASP A 212 OG B SER A 326 2.15 REMARK 500 NZ A LYS A 293 O HOH A 2148 1.79 REMARK 500 NZ B LYS A 293 O HOH A 2108 1.61 REMARK 500 SD A MET A 302 O A HOH A 2362 1.73 REMARK 500 SD B MET A 302 O B HOH A 2362 1.79 REMARK 500 OG1 THR B 105 O HOH B 2079 1.71 REMARK 500 OD2 ASP B 212 OG A SER B 326 2.15 REMARK 500 NZ LYS B 293 O HOH B 2079 1.80 REMARK 500 O HOH A 2108 O HOH A 2109 1.88 REMARK 500 O HOH A 2110 O HOH A 2111 2.09 REMARK 500 O HOH A 2116 O HOH A 2142 2.18 REMARK 500 O HOH A 2287 O HOH A 2288 2.18 REMARK 500 O HOH B 2221 O HOH B 2222 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 485 N PRO A 485 CD 0.093 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 485 C - N - CD ANGL. DEV. = 15.1 DEGREES REMARK 500 PRO B 485 C - N - CD ANGL. DEV. = -13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 261 8.68 -150.42 REMARK 500 SER A 294 -165.35 -102.22 REMARK 500 ASP A 318 -166.21 -161.51 REMARK 500 ASN B 261 9.24 -151.75 REMARK 500 SER B 294 -165.34 -101.18 REMARK 500 ASP B 318 -166.65 -161.25 REMARK 500 ARG B 440 19.60 59.85 REMARK 500 PRO B 485 126.85 -30.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 177 PRO A 178 40.46 REMARK 500 GLY B 177 PRO B 178 53.21 REMARK 500 SER B 484 PRO B 485 -65.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A 177 12.32 REMARK 500 SER A 484 11.04 REMARK 500 GLY B 177 12.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PGE A 1506 REMARK 610 PGE A 1507 REMARK 610 PGE A 1508 REMARK 610 PGE A 1509 REMARK 610 PGE B 1500 REMARK 610 PGE B 1501 REMARK 610 PGE B 1502 REMARK 610 PGE B 1503 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1505 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 460 O REMARK 620 2 ASN A 487 OD1 85.0 REMARK 620 3 HOH A2395 O 83.3 73.6 REMARK 620 4 HOH A2396 O 107.4 143.3 73.8 REMARK 620 5 HOH A2492 O 74.9 151.1 123.0 64.3 REMARK 620 6 LEU A 339 O 172.0 87.2 92.9 78.1 113.0 REMARK 620 7 GLU A 448 OE1 91.5 85.8 159.1 126.9 74.4 89.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1499 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 339 O REMARK 620 2 GLU B 448 OE1 89.9 REMARK 620 3 LYS B 460 O 171.9 90.8 REMARK 620 4 HOH B2294 O 76.5 129.0 109.1 REMARK 620 5 HOH B2376 O 113.0 74.7 74.9 66.7 REMARK 620 6 ASN B 487 OD1 85.7 84.4 86.3 141.1 151.5 REMARK 620 7 HOH B2295 O 93.3 157.8 83.2 73.0 123.5 73.9 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1498 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1499 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A1506 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A1507 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A1508 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A1509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1498 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B1499 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B1500 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B1503 REMARK 999 REMARK 999 SEQUENCE REMARK 999 STRUCTURE IS FROM RIBOTYPE 027, REFERENCE GIVEN IS FROM REMARK 999 RIBOTYPE 630, THE ONLY DIFFERENCES ARE THAT N450 IN 630 IS REMARK 999 D IN 027 AND A453 IN 630 IS G IN 027. REMARK 999 GEMBANK ID 4915160 DBREF 4CI7 A 33 497 UNP C9YQ11 C9YQ11_CLODR 33 497 DBREF 4CI7 B 33 497 UNP C9YQ11 C9YQ11_CLODR 33 497 SEQADV 4CI7 GLY A 28 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 PRO A 29 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 LEU A 30 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 GLY A 31 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 SER A 32 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 ALA A 116 UNP C9YQ11 CYS 116 ENGINEERED MUTATION SEQADV 4CI7 GLY B 28 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 PRO B 29 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 LEU B 30 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 GLY B 31 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 SER B 32 UNP C9YQ11 EXPRESSION TAG SEQADV 4CI7 ALA B 116 UNP C9YQ11 CYS 116 ENGINEERED MUTATION SEQRES 1 A 470 GLY PRO LEU GLY SER HIS LYS THR LEU ASP GLY VAL GLU SEQRES 2 A 470 THR ALA GLU TYR SER GLU SER TYR LEU GLN TYR LEU GLU SEQRES 3 A 470 ASP VAL LYS ASN GLY ASP THR ALA LYS TYR ASN GLY VAL SEQRES 4 A 470 ILE PRO PHE PRO HIS GLU MET GLU GLY THR THR LEU ARG SEQRES 5 A 470 ASN LYS GLY ARG SER SER LEU PRO SER ALA TYR LYS SER SEQRES 6 A 470 SER VAL ALA TYR ASN PRO MET ASP LEU GLY LEU THR THR SEQRES 7 A 470 PRO ALA LYS ASN GLN GLY SER LEU ASN THR ALA TRP SER SEQRES 8 A 470 PHE SER GLY MET SER THR LEU GLU ALA TYR LEU LYS LEU SEQRES 9 A 470 LYS GLY TYR GLY THR TYR ASP LEU SER GLU GLU HIS LEU SEQRES 10 A 470 ARG TRP TRP ALA THR GLY GLY LYS TYR GLY TRP ASN LEU SEQRES 11 A 470 ASP ASP MET SER GLY SER SER ASN VAL THR ALA ILE GLY SEQRES 12 A 470 TYR LEU THR ALA TRP ALA GLY PRO LYS LEU GLU LYS ASP SEQRES 13 A 470 ILE PRO TYR ASN LEU LYS SER GLU ALA GLN GLY ALA THR SEQRES 14 A 470 LYS PRO SER ASN MET ASP THR ALA PRO THR GLN PHE ASN SEQRES 15 A 470 VAL THR ASP VAL VAL ARG LEU ASN LYS ASP LYS GLU THR SEQRES 16 A 470 VAL LYS ASN ALA ILE MET GLN TYR GLY SER VAL THR SER SEQRES 17 A 470 GLY TYR ALA HIS TYR SER THR TYR PHE ASN LYS ASP GLU SEQRES 18 A 470 THR ALA TYR ASN CYS THR ASN LYS ARG ALA PRO LEU ASN SEQRES 19 A 470 HIS ALA VAL ALA ILE VAL GLY TRP ASP ASP ASN TYR SER SEQRES 20 A 470 LYS ASP ASN PHE ALA SER ASP VAL LYS PRO GLU SER ASN SEQRES 21 A 470 GLY ALA TRP LEU VAL LYS SER SER TRP GLY GLU PHE ASN SEQRES 22 A 470 SER MET LYS GLY PHE PHE TRP ILE SER TYR GLU ASP LYS SEQRES 23 A 470 THR LEU LEU THR ASP THR ASP ASN TYR ALA MET LYS SER SEQRES 24 A 470 VAL SER LYS PRO ASP SER ASP LYS LYS MET TYR GLN LEU SEQRES 25 A 470 GLU TYR ALA GLY LEU SER LYS ILE MET SER ASN LYS VAL SEQRES 26 A 470 THR ALA ALA ASN VAL PHE ASP PHE SER ARG ASP SER GLU SEQRES 27 A 470 LYS LEU ASP SER VAL MET PHE GLU THR ASP SER VAL GLY SEQRES 28 A 470 ALA LYS TYR GLU VAL TYR TYR ALA PRO VAL VAL ASN GLY SEQRES 29 A 470 VAL PRO GLN ASN ASN SER MET THR LYS LEU ALA SER GLY SEQRES 30 A 470 THR VAL SER TYR SER GLY TYR ILE ASN VAL PRO THR ASN SEQRES 31 A 470 SER TYR SER LEU PRO LYS GLY LYS GLY ALA ILE VAL VAL SEQRES 32 A 470 VAL ILE ASP ASN THR ALA ASN PRO ASN ARG GLU LYS SER SEQRES 33 A 470 THR LEU ALA TYR GLU THR ASP ILE ASP GLY TYR TYR LEU SEQRES 34 A 470 TYR GLU ALA LYS ALA ASN LEU GLY GLU SER TYR ILE LEU SEQRES 35 A 470 GLN ASN ASN LYS PHE GLU ASP ILE ASN THR TYR SER GLU SEQRES 36 A 470 PHE SER PRO CYS ASN PHE VAL ILE LYS ALA ILE THR LYS SEQRES 37 A 470 THR SER SEQRES 1 B 470 GLY PRO LEU GLY SER HIS LYS THR LEU ASP GLY VAL GLU SEQRES 2 B 470 THR ALA GLU TYR SER GLU SER TYR LEU GLN TYR LEU GLU SEQRES 3 B 470 ASP VAL LYS ASN GLY ASP THR ALA LYS TYR ASN GLY VAL SEQRES 4 B 470 ILE PRO PHE PRO HIS GLU MET GLU GLY THR THR LEU ARG SEQRES 5 B 470 ASN LYS GLY ARG SER SER LEU PRO SER ALA TYR LYS SER SEQRES 6 B 470 SER VAL ALA TYR ASN PRO MET ASP LEU GLY LEU THR THR SEQRES 7 B 470 PRO ALA LYS ASN GLN GLY SER LEU ASN THR ALA TRP SER SEQRES 8 B 470 PHE SER GLY MET SER THR LEU GLU ALA TYR LEU LYS LEU SEQRES 9 B 470 LYS GLY TYR GLY THR TYR ASP LEU SER GLU GLU HIS LEU SEQRES 10 B 470 ARG TRP TRP ALA THR GLY GLY LYS TYR GLY TRP ASN LEU SEQRES 11 B 470 ASP ASP MET SER GLY SER SER ASN VAL THR ALA ILE GLY SEQRES 12 B 470 TYR LEU THR ALA TRP ALA GLY PRO LYS LEU GLU LYS ASP SEQRES 13 B 470 ILE PRO TYR ASN LEU LYS SER GLU ALA GLN GLY ALA THR SEQRES 14 B 470 LYS PRO SER ASN MET ASP THR ALA PRO THR GLN PHE ASN SEQRES 15 B 470 VAL THR ASP VAL VAL ARG LEU ASN LYS ASP LYS GLU THR SEQRES 16 B 470 VAL LYS ASN ALA ILE MET GLN TYR GLY SER VAL THR SER SEQRES 17 B 470 GLY TYR ALA HIS TYR SER THR TYR PHE ASN LYS ASP GLU SEQRES 18 B 470 THR ALA TYR ASN CYS THR ASN LYS ARG ALA PRO LEU ASN SEQRES 19 B 470 HIS ALA VAL ALA ILE VAL GLY TRP ASP ASP ASN TYR SER SEQRES 20 B 470 LYS ASP ASN PHE ALA SER ASP VAL LYS PRO GLU SER ASN SEQRES 21 B 470 GLY ALA TRP LEU VAL LYS SER SER TRP GLY GLU PHE ASN SEQRES 22 B 470 SER MET LYS GLY PHE PHE TRP ILE SER TYR GLU ASP LYS SEQRES 23 B 470 THR LEU LEU THR ASP THR ASP ASN TYR ALA MET LYS SER SEQRES 24 B 470 VAL SER LYS PRO ASP SER ASP LYS LYS MET TYR GLN LEU SEQRES 25 B 470 GLU TYR ALA GLY LEU SER LYS ILE MET SER ASN LYS VAL SEQRES 26 B 470 THR ALA ALA ASN VAL PHE ASP PHE SER ARG ASP SER GLU SEQRES 27 B 470 LYS LEU ASP SER VAL MET PHE GLU THR ASP SER VAL GLY SEQRES 28 B 470 ALA LYS TYR GLU VAL TYR TYR ALA PRO VAL VAL ASN GLY SEQRES 29 B 470 VAL PRO GLN ASN ASN SER MET THR LYS LEU ALA SER GLY SEQRES 30 B 470 THR VAL SER TYR SER GLY TYR ILE ASN VAL PRO THR ASN SEQRES 31 B 470 SER TYR SER LEU PRO LYS GLY LYS GLY ALA ILE VAL VAL SEQRES 32 B 470 VAL ILE ASP ASN THR ALA ASN PRO ASN ARG GLU LYS SER SEQRES 33 B 470 THR LEU ALA TYR GLU THR ASP ILE ASP GLY TYR TYR LEU SEQRES 34 B 470 TYR GLU ALA LYS ALA ASN LEU GLY GLU SER TYR ILE LEU SEQRES 35 B 470 GLN ASN ASN LYS PHE GLU ASP ILE ASN THR TYR SER GLU SEQRES 36 B 470 PHE SER PRO CYS ASN PHE VAL ILE LYS ALA ILE THR LYS SEQRES 37 B 470 THR SER HET SO4 A1498 5 HET GOL A1499 6 HET GOL A1500 6 HET GOL A1501 6 HET GOL A1502 12 HET GOL A1503 6 HET GOL A1504 12 HET CA A1505 1 HET PGE A1506 4 HET PGE A1507 7 HET PGE A1508 7 HET PGE A1509 7 HET SO4 B1498 5 HET CA B1499 1 HET PGE B1500 4 HET PGE B1501 4 HET PGE B1502 4 HET PGE B1503 7 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETNAM PGE TRIETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 GOL 6(C3 H8 O3) FORMUL 10 CA 2(CA 2+) FORMUL 11 PGE 8(C6 H14 O4) FORMUL 21 HOH *927(H2 O) HELIX 1 1 SER A 45 ASN A 57 1 13 HELIX 2 2 THR A 115 LYS A 132 1 18 HELIX 3 3 SER A 140 ALA A 148 1 9 HELIX 4 4 VAL A 166 ALA A 174 1 9 HELIX 5 5 ASP A 219 GLY A 231 1 13 HELIX 6 6 TYR A 240 TYR A 243 5 4 HELIX 7 7 SER A 274 PHE A 278 5 5 HELIX 8 8 ALA A 279 LYS A 283 5 5 HELIX 9 9 ASN A 395 MET A 398 5 4 HELIX 10 10 ASN A 478 TYR A 480 5 3 HELIX 11 11 SER B 45 ASN B 57 1 13 HELIX 12 12 ASP B 59 ASN B 64 1 6 HELIX 13 13 THR B 115 LYS B 132 1 18 HELIX 14 14 SER B 140 ALA B 148 1 9 HELIX 15 15 VAL B 166 ALA B 174 1 9 HELIX 16 16 ASP B 219 GLY B 231 1 13 HELIX 17 17 TYR B 240 TYR B 243 5 4 HELIX 18 18 SER B 274 PHE B 278 5 5 HELIX 19 19 ALA B 279 LYS B 283 5 5 HELIX 20 20 ASN B 478 TYR B 480 5 3 SHEET 1 AA 4 GLU A 40 THR A 41 0 SHEET 2 AA 4 SER A 345 SER A 349 -1 O MET A 348 N GLU A 40 SHEET 3 AA 4 SER A 443 GLU A 448 -1 O SER A 443 N SER A 349 SHEET 4 AA 4 ASN A 487 PHE A 488 -1 O ASN A 487 N GLU A 448 SHEET 1 AB 2 ALA A 95 TYR A 96 0 SHEET 2 AB 2 HIS A 262 ASP A 270 1 O TRP A 269 N TYR A 96 SHEET 1 AC 2 VAL A 233 TYR A 237 0 SHEET 2 AC 2 HIS A 262 ASP A 270 -1 O HIS A 262 N TYR A 237 SHEET 1 AD 5 ALA A 250 TYR A 251 0 SHEET 2 AD 5 PHE A 305 SER A 309 1 O TRP A 307 N TYR A 251 SHEET 3 AD 5 ALA A 289 LYS A 293 -1 O TRP A 290 N ILE A 308 SHEET 4 AD 5 HIS A 262 ASP A 270 -1 O ALA A 265 N LYS A 293 SHEET 5 AD 5 VAL A 233 TYR A 237 -1 O VAL A 233 N ILE A 266 SHEET 1 AE 5 ALA A 250 TYR A 251 0 SHEET 2 AE 5 PHE A 305 SER A 309 1 O TRP A 307 N TYR A 251 SHEET 3 AE 5 ALA A 289 LYS A 293 -1 O TRP A 290 N ILE A 308 SHEET 4 AE 5 HIS A 262 ASP A 270 -1 O ALA A 265 N LYS A 293 SHEET 5 AE 5 ALA A 95 TYR A 96 1 O TYR A 96 N TRP A 269 SHEET 1 AF 6 TYR A 322 SER A 328 0 SHEET 2 AF 6 ASN A 209 ARG A 215 -1 O ASN A 209 N SER A 328 SHEET 3 AF 6 GLY A 410 SER A 420 -1 O TYR A 411 N VAL A 213 SHEET 4 AF 6 GLU A 365 THR A 374 -1 O LEU A 367 N TYR A 419 SHEET 5 AF 6 ILE A 490 THR A 496 -1 O LYS A 491 N MET A 371 SHEET 6 AF 6 LYS A 335 TYR A 337 -1 O LYS A 335 N THR A 494 SHEET 1 AG 2 VAL A 392 PRO A 393 0 SHEET 2 AG 2 LYS A 380 VAL A 389 -1 O VAL A 389 N VAL A 392 SHEET 1 AH 2 THR A 399 THR A 405 0 SHEET 2 AH 2 LYS A 380 VAL A 389 -1 O TYR A 381 N GLY A 404 SHEET 1 AI 6 LYS A 473 ASP A 476 0 SHEET 2 AI 6 SER A 466 GLN A 470 -1 O ILE A 468 N GLU A 475 SHEET 3 AI 6 LYS A 351 PHE A 360 -1 O THR A 353 N LEU A 469 SHEET 4 AI 6 GLY A 424 ASP A 433 -1 O GLY A 424 N PHE A 360 SHEET 5 AI 6 LYS A 380 VAL A 389 -1 O LYS A 380 N ASP A 433 SHEET 6 AI 6 VAL A 392 PRO A 393 -1 O VAL A 392 N VAL A 389 SHEET 1 AJ 6 LYS A 473 ASP A 476 0 SHEET 2 AJ 6 SER A 466 GLN A 470 -1 O ILE A 468 N GLU A 475 SHEET 3 AJ 6 LYS A 351 PHE A 360 -1 O THR A 353 N LEU A 469 SHEET 4 AJ 6 GLY A 424 ASP A 433 -1 O GLY A 424 N PHE A 360 SHEET 5 AJ 6 LYS A 380 VAL A 389 -1 O LYS A 380 N ASP A 433 SHEET 6 AJ 6 THR A 399 THR A 405 -1 O THR A 399 N TYR A 385 SHEET 1 BA 4 GLU B 40 THR B 41 0 SHEET 2 BA 4 SER B 345 SER B 349 -1 O MET B 348 N GLU B 40 SHEET 3 BA 4 SER B 443 GLU B 448 -1 O SER B 443 N SER B 349 SHEET 4 BA 4 ASN B 487 PHE B 488 -1 O ASN B 487 N GLU B 448 SHEET 1 BB 2 ALA B 95 TYR B 96 0 SHEET 2 BB 2 HIS B 262 ASP B 270 1 O TRP B 269 N TYR B 96 SHEET 1 BC 2 VAL B 233 TYR B 237 0 SHEET 2 BC 2 HIS B 262 ASP B 270 -1 O HIS B 262 N TYR B 237 SHEET 1 BD 5 ALA B 250 TYR B 251 0 SHEET 2 BD 5 PHE B 305 SER B 309 1 O TRP B 307 N TYR B 251 SHEET 3 BD 5 ALA B 289 LYS B 293 -1 O TRP B 290 N ILE B 308 SHEET 4 BD 5 HIS B 262 ASP B 270 -1 O ALA B 265 N LYS B 293 SHEET 5 BD 5 VAL B 233 TYR B 237 -1 O VAL B 233 N ILE B 266 SHEET 1 BE 5 ALA B 250 TYR B 251 0 SHEET 2 BE 5 PHE B 305 SER B 309 1 O TRP B 307 N TYR B 251 SHEET 3 BE 5 ALA B 289 LYS B 293 -1 O TRP B 290 N ILE B 308 SHEET 4 BE 5 HIS B 262 ASP B 270 -1 O ALA B 265 N LYS B 293 SHEET 5 BE 5 ALA B 95 TYR B 96 1 O TYR B 96 N TRP B 269 SHEET 1 BF 6 TYR B 322 SER B 328 0 SHEET 2 BF 6 ASN B 209 ARG B 215 -1 O ASN B 209 N SER B 328 SHEET 3 BF 6 GLY B 410 SER B 420 -1 O TYR B 411 N VAL B 213 SHEET 4 BF 6 GLU B 365 THR B 374 -1 O LEU B 367 N TYR B 419 SHEET 5 BF 6 ILE B 490 THR B 496 -1 O LYS B 491 N MET B 371 SHEET 6 BF 6 LYS B 335 TYR B 337 -1 O LYS B 335 N THR B 494 SHEET 1 BG 2 VAL B 392 PRO B 393 0 SHEET 2 BG 2 LYS B 380 VAL B 389 -1 O VAL B 389 N VAL B 392 SHEET 1 BH 2 THR B 399 THR B 405 0 SHEET 2 BH 2 LYS B 380 VAL B 389 -1 O TYR B 381 N GLY B 404 SHEET 1 BI 6 LYS B 473 ASP B 476 0 SHEET 2 BI 6 SER B 466 GLN B 470 -1 O ILE B 468 N GLU B 475 SHEET 3 BI 6 LYS B 351 PHE B 360 -1 O THR B 353 N LEU B 469 SHEET 4 BI 6 GLY B 424 ASP B 433 -1 O GLY B 424 N PHE B 360 SHEET 5 BI 6 LYS B 380 VAL B 389 -1 O LYS B 380 N ASP B 433 SHEET 6 BI 6 VAL B 392 PRO B 393 -1 O VAL B 392 N VAL B 389 SHEET 1 BJ 6 LYS B 473 ASP B 476 0 SHEET 2 BJ 6 SER B 466 GLN B 470 -1 O ILE B 468 N GLU B 475 SHEET 3 BJ 6 LYS B 351 PHE B 360 -1 O THR B 353 N LEU B 469 SHEET 4 BJ 6 GLY B 424 ASP B 433 -1 O GLY B 424 N PHE B 360 SHEET 5 BJ 6 LYS B 380 VAL B 389 -1 O LYS B 380 N ASP B 433 SHEET 6 BJ 6 THR B 399 THR B 405 -1 O THR B 399 N TYR B 385 LINK CA CA A1505 O LYS A 460 1555 1555 2.28 LINK CA CA A1505 OD1 ASN A 487 1555 1555 2.33 LINK CA CA A1505 O HOH A2395 1555 1555 2.59 LINK CA CA A1505 O HOH A2396 1555 1555 2.46 LINK CA CA A1505 O HOH A2492 1555 1555 2.50 LINK CA CA A1505 O LEU A 339 1555 1555 2.28 LINK CA CA A1505 OE1 GLU A 448 1555 1555 2.41 LINK CA CA B1499 OE1 GLU B 448 1555 1555 2.52 LINK CA CA B1499 O LYS B 460 1555 1555 2.24 LINK CA CA B1499 O HOH B2294 1555 1555 2.32 LINK CA CA B1499 O HOH B2376 1555 1555 2.54 LINK CA CA B1499 OD1 ASN B 487 1555 1555 2.33 LINK CA CA B1499 O HOH B2295 1555 1555 2.39 LINK CA CA B1499 O LEU B 339 1555 1555 2.30 CISPEP 1 SER A 484 PRO A 485 0 18.89 SITE 1 AC1 4 LYS A 246 SER A 280 HOH A2300 HOH A2341 SITE 1 AC2 6 ASN A 187 LYS A 189 ALA A 195 THR A 196 SITE 2 AC2 6 HOH A2243 HOH A2245 SITE 1 AC3 2 GLN A 193 GLN B 193 SITE 1 AC4 5 GLU A 46 LYS A 256 LYS A 335 SER A 361 SITE 2 AC4 5 ARG A 362 SITE 1 AC5 7 ASN A 109 GLY A 297 GLU A 298 HOH A2115 SITE 2 AC5 7 HOH A2120 HOH A2355 HOH A2524 SITE 1 AC6 3 TRP A 296 PGE A1508 HOH A2354 SITE 1 AC7 4 LYS A 130 GLY A 135 THR A 136 HOH A2525 SITE 1 AC8 7 LEU A 339 GLU A 448 LYS A 460 ASN A 487 SITE 2 AC8 7 HOH A2395 HOH A2396 HOH A2492 SITE 1 AC9 5 TYR A 240 SER A 241 HOH A2289 HOH A2291 SITE 2 AC9 5 HOH A2526 SITE 1 BC1 4 SER A 328 LYS A 329 LYS A 334 HOH A2377 SITE 1 BC2 4 ASN A 114 ASN A 261 GOL A1503 HOH A2126 SITE 1 BC3 3 TYR A 240 ASN A 255 ARG A 257 SITE 1 BC4 4 ASP B 219 LYS B 220 HOH B2205 HOH B2206 SITE 1 BC5 7 LEU B 339 GLU B 448 LYS B 460 ASN B 487 SITE 2 BC5 7 HOH B2294 HOH B2295 HOH B2376 SITE 1 BC6 1 TRP B 296 SITE 1 BC7 3 ASN B 187 ALA B 195 THR B 196 SITE 1 BC8 4 ASN B 245 LYS B 246 ALA B 279 SER B 280 SITE 1 BC9 4 ASN B 109 GLY B 297 GLU B 298 HOH B2091 CRYST1 50.910 73.490 125.630 90.00 93.57 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019643 0.000000 0.001225 0.00000 SCALE2 0.000000 0.013607 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007975 0.00000