HEADER TRANSCRIPTION 19-DEC-13 4CJA TITLE BURRH DNA-BINDING PROTEIN FROM BURKHOLDERIA RHIZOXINICA IN COMPLEX TITLE 2 WITH ITS TARGET DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BURRH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5'-D(*DTP*TP*AP*AP*GP*AP*GP*AP*AP*GP*CP*AP*AP*DP COMPND 7 *TP*AP*CP*GP*TP*TP*AP*TP*AP)-3'; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: 5'-D(*DTP*AP*TP*AP*AP*CP*GP*TP*AP*TP*TP*TP*GP*CP COMPND 12 *TP*TP*CP*TP*CP*TP*TP*AP*AP)-3'; COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA RHIZOXINICA; SOURCE 3 ORGANISM_TAXID: 412963; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET24D; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: BURKHOLDERIA RHIZOXINICA; SOURCE 12 ORGANISM_TAXID: 412963; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: BURKHOLDERIA RHIZOXINICA; SOURCE 16 ORGANISM_TAXID: 412963 KEYWDS TRANSCRIPTION, GENE TARGETING, GENETICS, PROTEIN-DNA INTERACTION EXPDTA X-RAY DIFFRACTION AUTHOR S.STELLA,R.MOLINA,B.LOPEZ-MENDEZ,R.CAMPOS-OLIVAS,P.DUCHATEAU, AUTHOR 2 G.MONTOYA REVDAT 3 08-MAY-24 4CJA 1 REMARK REVDAT 2 23-JUL-14 4CJA 1 JRNL REVDAT 1 09-JUL-14 4CJA 0 JRNL AUTH S.STELLA,R.MOLINA,B.LOPEZ-MENDEZ,A.JUILLERAT,C.BERTONATI, JRNL AUTH 2 F.DABOUSSI,R.CAMPOS-OLIVAS,P.DUCHATEAU,G.MONTOYA JRNL TITL BUD, A HELIX-LOOP-HELIX DNA-BINDING DOMAIN FOR GENOME JRNL TITL 2 MODIFICATION JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2042 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25004980 JRNL DOI 10.1107/S1399004714011183 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 27077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1392 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.6606 - 5.7068 0.99 2663 166 0.1765 0.2086 REMARK 3 2 5.7068 - 4.5319 1.00 2633 150 0.1810 0.2491 REMARK 3 3 4.5319 - 3.9597 1.00 2626 156 0.1757 0.2380 REMARK 3 4 3.9597 - 3.5980 1.00 2654 132 0.2112 0.3082 REMARK 3 5 3.5980 - 3.3402 0.99 2633 117 0.2318 0.3536 REMARK 3 6 3.3402 - 3.1434 0.99 2613 134 0.2381 0.3369 REMARK 3 7 3.1434 - 2.9860 1.00 2654 143 0.2642 0.3719 REMARK 3 8 2.9860 - 2.8561 1.00 2622 119 0.2480 0.3514 REMARK 3 9 2.8561 - 2.7462 1.00 2627 147 0.2448 0.3160 REMARK 3 10 2.7462 - 2.6514 0.99 2602 128 0.2516 0.3389 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6598 REMARK 3 ANGLE : 1.366 9097 REMARK 3 CHIRALITY : 0.082 1045 REMARK 3 PLANARITY : 0.004 1054 REMARK 3 DIHEDRAL : 21.769 2498 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 30.7165 55.4354 56.5632 REMARK 3 T TENSOR REMARK 3 T11: 0.3316 T22: 0.2804 REMARK 3 T33: 0.4567 T12: -0.0043 REMARK 3 T13: 0.0346 T23: 0.0704 REMARK 3 L TENSOR REMARK 3 L11: 1.1025 L22: 1.0560 REMARK 3 L33: 2.6075 L12: -0.4478 REMARK 3 L13: -1.0238 L23: 0.9836 REMARK 3 S TENSOR REMARK 3 S11: -0.0808 S12: -0.1173 S13: -0.0893 REMARK 3 S21: 0.2694 S22: 0.0145 S23: 0.1886 REMARK 3 S31: 0.2021 S32: -0.0854 S33: 0.0557 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CJA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1290059160. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27134 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 47.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.61000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.97500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 PHE A 4 REMARK 465 VAL A 5 REMARK 465 ASP A 6 REMARK 465 GLN A 7 REMARK 465 ASP A 8 REMARK 465 LYS A 9 REMARK 465 GLN A 10 REMARK 465 MET A 11 REMARK 465 ALA A 12 REMARK 465 ASN A 13 REMARK 465 ARG A 14 REMARK 465 GLU A 768 REMARK 465 ARG A 769 REMARK 465 GLN A 770 REMARK 465 GLY A 771 REMARK 465 GLY A 772 REMARK 465 SER A 773 REMARK 465 GLU A 774 REMARK 465 PHE A 775 REMARK 465 GLU A 776 REMARK 465 LEU A 777 REMARK 465 GLU A 778 REMARK 465 ASN A 779 REMARK 465 LEU A 780 REMARK 465 TYR A 781 REMARK 465 PHE A 782 REMARK 465 GLN A 783 REMARK 465 GLY A 784 REMARK 465 GLU A 785 REMARK 465 LEU A 786 REMARK 465 ARG A 787 REMARK 465 ARG A 788 REMARK 465 GLN A 789 REMARK 465 ALA A 790 REMARK 465 SER A 791 REMARK 465 ALA A 792 REMARK 465 LEU A 793 REMARK 465 GLU A 794 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2017 O HOH A 2095 2.09 REMARK 500 OP1 DT C 13 O HOH C 2007 2.15 REMARK 500 O HOH A 2049 O HOH A 2105 2.15 REMARK 500 OE1 GLU A 206 NH2 ARG A 216 2.15 REMARK 500 O GLY A 587 O HOH A 2069 2.19 REMARK 500 NE2 GLN A 197 O HOH A 2012 2.19 REMARK 500 O ILE A 552 O HOH A 2061 2.19 REMARK 500 OP2 DT C 10 O HOH C 2003 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 541 OG1 THR A 679 2756 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA B 10 O4' - C1' - N9 ANGL. DEV. = -5.6 DEGREES REMARK 500 DT B 18 P - O5' - C5' ANGL. DEV. = -10.3 DEGREES REMARK 500 DT B 20 N3 - C4 - O4 ANGL. DEV. = 4.1 DEGREES REMARK 500 DA B 21 O4' - C4' - C3' ANGL. DEV. = -2.4 DEGREES REMARK 500 DA B 21 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT C -1 C3' - C2' - C1' ANGL. DEV. = -4.8 DEGREES REMARK 500 DT C -1 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT C 6 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA C 7 P - O5' - C5' ANGL. DEV. = -10.9 DEGREES REMARK 500 DT C 9 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC C 12 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DC C 15 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC C 17 C5' - C4' - O4' ANGL. DEV. = 7.0 DEGREES REMARK 500 DC C 17 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 DA C 20 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 DA C 21 O4' - C1' - N9 ANGL. DEV. = 5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 19 -5.49 -57.06 REMARK 500 TYR A 29 88.62 -68.27 REMARK 500 ASN A 93 164.16 176.76 REMARK 500 LEU A 104 3.80 -58.21 REMARK 500 LEU A 106 23.14 -154.01 REMARK 500 SER A 116 -174.77 -65.92 REMARK 500 GLU A 145 49.08 -81.83 REMARK 500 ARG A 146 -1.26 -143.78 REMARK 500 LYS A 178 31.77 -81.71 REMARK 500 ALA A 184 31.36 -96.35 REMARK 500 LEU A 203 -18.21 -48.96 REMARK 500 LYS A 211 24.94 -75.40 REMARK 500 ALA A 224 46.03 -92.98 REMARK 500 GLU A 244 32.58 -79.27 REMARK 500 ASP A 345 33.38 -98.51 REMARK 500 HIS A 370 -11.43 -141.30 REMARK 500 ARG A 490 -5.07 86.75 REMARK 500 ALA A 686 45.77 -95.43 REMARK 500 ASN A 720 -51.65 -122.76 REMARK 500 PRO A 765 -0.60 -59.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CJ9 RELATED DB: PDB REMARK 900 BURRH DNA-BINDING PROTEIN FROM BURKHOLDERIA RHIZOXINICA IN ITS APO REMARK 900 FORM DBREF 4CJA A 1 794 PDB 4CJA 4CJA 1 794 DBREF 4CJA B -1 21 PDB 4CJA 4CJA -1 21 DBREF 4CJA C -1 21 PDB 4CJA 4CJA -1 21 SEQRES 1 A 794 SER THR ALA PHE VAL ASP GLN ASP LYS GLN MET ALA ASN SEQRES 2 A 794 ARG LEU ASN LEU SER PRO LEU GLU ARG SER LYS ILE GLU SEQRES 3 A 794 LYS GLN TYR GLY GLY ALA THR THR LEU ALA PHE ILE SER SEQRES 4 A 794 ASN LYS GLN GLN GLU LEU ALA GLN ILE LEU SER ARG ALA SEQRES 5 A 794 ASP ILE LEU LYS ILE ALA SER TYR ASP CYS ALA ALA HIS SEQRES 6 A 794 ALA LEU GLN ALA VAL LEU ASP CYS GLY PRO MET LEU GLY SEQRES 7 A 794 LYS ARG GLY PHE SER GLN SER ASP ILE VAL LYS ILE ALA SEQRES 8 A 794 GLY ASN ILE GLY GLY ALA GLN ALA LEU GLN ALA VAL LEU SEQRES 9 A 794 ASP LEU GLU SER MET LEU GLY LYS ARG GLY PHE SER ARG SEQRES 10 A 794 ASP ASP ILE ALA LYS MET ALA GLY ASN ILE GLY GLY ALA SEQRES 11 A 794 GLN THR LEU GLN ALA VAL LEU ASP LEU GLU SER ALA PHE SEQRES 12 A 794 ARG GLU ARG GLY PHE SER GLN ALA ASP ILE VAL LYS ILE SEQRES 13 A 794 ALA GLY ASN ASN GLY GLY ALA GLN ALA LEU TYR SER VAL SEQRES 14 A 794 LEU ASP VAL GLU PRO THR LEU GLY LYS ARG GLY PHE SER SEQRES 15 A 794 ARG ALA ASP ILE VAL LYS ILE ALA GLY ASN THR GLY GLY SEQRES 16 A 794 ALA GLN ALA LEU HIS THR VAL LEU ASP LEU GLU PRO ALA SEQRES 17 A 794 LEU GLY LYS ARG GLY PHE SER ARG ILE ASP ILE VAL LYS SEQRES 18 A 794 ILE ALA ALA ASN ASN GLY GLY ALA GLN ALA LEU HIS ALA SEQRES 19 A 794 VAL LEU ASP LEU GLY PRO THR LEU ARG GLU CYS GLY PHE SEQRES 20 A 794 SER GLN ALA THR ILE ALA LYS ILE ALA GLY ASN ILE GLY SEQRES 21 A 794 GLY ALA GLN ALA LEU GLN MET VAL LEU ASP LEU GLY PRO SEQRES 22 A 794 ALA LEU GLY LYS ARG GLY PHE SER GLN ALA THR ILE ALA SEQRES 23 A 794 LYS ILE ALA GLY ASN ILE GLY GLY ALA GLN ALA LEU GLN SEQRES 24 A 794 THR VAL LEU ASP LEU GLU PRO ALA LEU CYS GLU ARG GLY SEQRES 25 A 794 PHE SER GLN ALA THR ILE ALA LYS MET ALA GLY ASN ASN SEQRES 26 A 794 GLY GLY ALA GLN ALA LEU GLN THR VAL LEU ASP LEU GLU SEQRES 27 A 794 PRO ALA LEU ARG LYS ARG ASP PHE ARG GLN ALA ASP ILE SEQRES 28 A 794 ILE LYS ILE ALA GLY ASN ASP GLY GLY ALA GLN ALA LEU SEQRES 29 A 794 GLN ALA VAL ILE GLU HIS GLY PRO THR LEU ARG GLN HIS SEQRES 30 A 794 GLY PHE ASN LEU ALA ASP ILE VAL LYS MET ALA GLY ASN SEQRES 31 A 794 ILE GLY GLY ALA GLN ALA LEU GLN ALA VAL LEU ASP LEU SEQRES 32 A 794 LYS PRO VAL LEU ASP GLU HIS GLY PHE SER GLN PRO ASP SEQRES 33 A 794 ILE VAL LYS MET ALA GLY ASN ILE GLY GLY ALA GLN ALA SEQRES 34 A 794 LEU GLN ALA VAL LEU SER LEU GLY PRO ALA LEU ARG GLU SEQRES 35 A 794 ARG GLY PHE SER GLN PRO ASP ILE VAL LYS ILE ALA GLY SEQRES 36 A 794 ASN THR GLY GLY ALA GLN ALA LEU GLN ALA VAL LEU ASP SEQRES 37 A 794 LEU GLU LEU THR LEU VAL GLU HIS GLY PHE SER GLN PRO SEQRES 38 A 794 ASP ILE VAL ARG ILE THR GLY ASN ARG GLY GLY ALA GLN SEQRES 39 A 794 ALA LEU GLN ALA VAL LEU ALA LEU GLU LEU THR LEU ARG SEQRES 40 A 794 GLU ARG GLY PHE SER GLN PRO ASP ILE VAL LYS ILE ALA SEQRES 41 A 794 GLY ASN SER GLY GLY ALA GLN ALA LEU GLN ALA VAL LEU SEQRES 42 A 794 ASP LEU GLU LEU THR PHE ARG GLU ARG GLY PHE SER GLN SEQRES 43 A 794 ALA ASP ILE VAL LYS ILE ALA GLY ASN ASP GLY GLY THR SEQRES 44 A 794 GLN ALA LEU HIS ALA VAL LEU ASP LEU GLU ARG MET LEU SEQRES 45 A 794 GLY ASP ARG GLY PHE SER ARG ALA ASP ILE VAL ASN VAL SEQRES 46 A 794 ALA GLY ASN ASN GLY GLY ALA GLN ALA LEU LYS ALA VAL SEQRES 47 A 794 LEU GLU HIS GLU ALA THR LEU ASN GLU ARG GLY PHE SER SEQRES 48 A 794 ARG ALA ASP ILE VAL LYS ILE ALA GLY ASN GLY GLY GLY SEQRES 49 A 794 ALA GLN ALA LEU LYS ALA VAL LEU GLU HIS GLU ALA THR SEQRES 50 A 794 LEU ASP GLU ARG GLY PHE SER ARG ALA ASP ILE VAL ARG SEQRES 51 A 794 ILE ALA GLY ASN GLY GLY GLY ALA GLN ALA LEU LYS ALA SEQRES 52 A 794 VAL LEU GLU HIS GLY PRO THR LEU ASN GLU ARG GLY PHE SEQRES 53 A 794 ASN LEU THR ASP ILE VAL GLU MET ALA ALA ASN SER GLY SEQRES 54 A 794 GLY ALA GLN ALA LEU LYS ALA VAL LEU GLU HIS GLY PRO SEQRES 55 A 794 THR LEU ARG GLN ARG GLY LEU SER LEU ILE ASP ILE VAL SEQRES 56 A 794 GLU ILE ALA SER ASN GLY GLY ALA GLN ALA LEU LYS ALA SEQRES 57 A 794 VAL LEU LYS TYR GLY PRO VAL LEU MET GLN ALA GLY ARG SEQRES 58 A 794 SER ASN GLU GLU ILE VAL HIS VAL ALA ALA ARG ARG GLY SEQRES 59 A 794 GLY ALA GLY ARG ILE ARG LYS MET VAL ALA PRO LEU LEU SEQRES 60 A 794 GLU ARG GLN GLY GLY SER GLU PHE GLU LEU GLU ASN LEU SEQRES 61 A 794 TYR PHE GLN GLY GLU LEU ARG ARG GLN ALA SER ALA LEU SEQRES 62 A 794 GLU SEQRES 1 B 23 DT DT DA DA DG DA DG DA DA DG DC DA DA SEQRES 2 B 23 DA DT DA DC DG DT DT DA DT DA SEQRES 1 C 23 DT DA DT DA DA DC DG DT DA DT DT DT DG SEQRES 2 C 23 DC DT DT DC DT DC DT DT DA DA FORMUL 4 HOH *125(H2 O) HELIX 1 1 SER A 18 LYS A 27 1 10 HELIX 2 2 GLY A 30 SER A 39 1 10 HELIX 3 3 LYS A 41 GLN A 47 1 7 HELIX 4 4 SER A 50 ALA A 58 1 9 HELIX 5 5 CYS A 62 ALA A 69 1 8 HELIX 6 6 GLY A 74 LYS A 79 1 6 HELIX 7 7 SER A 83 GLY A 92 1 10 HELIX 8 8 GLY A 95 ALA A 102 1 8 HELIX 9 9 LEU A 110 GLY A 114 5 5 HELIX 10 10 SER A 116 GLY A 125 1 10 HELIX 11 11 GLY A 128 LEU A 137 1 10 HELIX 12 12 SER A 149 GLY A 158 1 10 HELIX 13 13 GLY A 161 LYS A 178 1 18 HELIX 14 14 SER A 182 GLY A 191 1 10 HELIX 15 15 GLY A 194 LEU A 203 1 10 HELIX 16 16 LEU A 205 LYS A 211 1 7 HELIX 17 17 SER A 215 ALA A 224 1 10 HELIX 18 18 GLY A 227 GLU A 244 1 18 HELIX 19 19 SER A 248 ALA A 256 1 9 HELIX 20 20 GLY A 260 GLY A 276 1 17 HELIX 21 21 SER A 281 GLY A 290 1 10 HELIX 22 22 GLY A 293 ASP A 303 1 11 HELIX 23 23 LEU A 304 GLU A 310 1 7 HELIX 24 24 SER A 314 ALA A 322 1 9 HELIX 25 25 GLY A 326 ARG A 344 1 19 HELIX 26 26 ARG A 347 GLY A 356 1 10 HELIX 27 27 GLY A 359 GLN A 376 1 18 HELIX 28 28 ASN A 380 GLY A 389 1 10 HELIX 29 29 GLY A 392 GLY A 411 1 20 HELIX 30 30 SER A 413 GLY A 422 1 10 HELIX 31 31 GLY A 425 LEU A 436 1 12 HELIX 32 32 GLY A 437 GLY A 444 1 8 HELIX 33 33 SER A 446 GLY A 455 1 10 HELIX 34 34 GLY A 458 HIS A 476 1 19 HELIX 35 35 GLN A 480 ASN A 489 1 10 HELIX 36 36 GLY A 491 GLU A 503 1 13 HELIX 37 37 LEU A 504 GLU A 508 5 5 HELIX 38 38 SER A 512 GLY A 521 1 10 HELIX 39 39 GLY A 524 GLU A 541 1 18 HELIX 40 40 SER A 545 GLY A 554 1 10 HELIX 41 41 GLY A 557 ASP A 574 1 18 HELIX 42 42 SER A 578 GLY A 587 1 10 HELIX 43 43 GLY A 590 ARG A 608 1 19 HELIX 44 44 SER A 611 GLY A 620 1 10 HELIX 45 45 GLY A 623 HIS A 634 1 12 HELIX 46 46 LEU A 638 GLY A 642 5 5 HELIX 47 47 SER A 644 GLY A 653 1 10 HELIX 48 48 GLY A 656 ARG A 674 1 19 HELIX 49 49 ASN A 677 ALA A 686 1 10 HELIX 50 50 GLY A 689 ARG A 707 1 19 HELIX 51 51 SER A 710 SER A 719 1 10 HELIX 52 52 GLY A 721 ALA A 739 1 19 HELIX 53 53 SER A 742 ALA A 751 1 10 HELIX 54 54 GLY A 754 ALA A 764 1 11 CISPEP 1 ARG A 542 GLY A 543 0 0.28 CISPEP 2 ASN A 720 GLY A 721 0 9.92 CRYST1 70.242 95.950 76.446 90.00 109.50 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014236 0.000000 0.005041 0.00000 SCALE2 0.000000 0.010422 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013877 0.00000